Protein prenyltransferase alpha subunit repeat
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G24490 AT4G24490 AT5G41820 AT5G41820 |
| fragaria_vesca | FvH4_5g35190 FvH4_5g35190 FvH4_5g35190 FvH4_5g35190 |
| malus_domestica | MD08G1200000.v1.1 MD15G1387100.v1.1 |
| prunus_persica | Prupe.1G533400_v2.0.a1 Prupe.1G572600_v2.0.a1 |
| pyrus_communis | pycom08g17340 pycom15g34720 |
| rosa_chinensis | RchiOBHm_Chr7g0236311 |
| rosa_laevigata | RLG00000001088 |
| rosa_multiflora | Rmu_sc0005716.1_g000009 Rmu_sc0006268.1_g000006 |
| rosa_roxburghii | Rroxscaffold_3G00225260 |
| rosa_rugosa | Rorug07G0295400 |
| rosa_samantha | Rh7AG450600 Rh7BG422100 Rh7CG470300 Rh7DG439600 |
| rosa_wichuraiana | Rw7G037450 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 759 |
| AccB1I | GGYRCC | 1 cut(s) | 1934 |
| AccI | GTMKAC | 1 cut(s) | 1606 |
| AccII | CGCG | 5 cut(s) | 26, 75, 221, 290, 372 |
| AciI | CCGC | 5 cut(s) | 24, 51, 54, 370, 436 |
| AclWI | GGATC | 5 cut(s) | 230, 401, 414, 644, 657 |
| AcsI | RAATTY | 5 cut(s) | 301, 415, 877, 986, 1164 |
| AcuI | CTGAAG | 2 cut(s) | 996, 1446 |
| AcyI | GRCGYC | 1 cut(s) | 756 |
| AfaI | GTAC | 4 cut(s) | 549, 630, 1196, 1405 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 403, 969, 970 |
| AhlI | ACTAGT | 1 cut(s) | 1901 |
| AleI | CACNNNNGTG | 1 cut(s) | 2068 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 155, 187 |
| Alw21I | GWGCWC | 2 cut(s) | 627, 1500 |
| Alw26I | GTCTC | 6 cut(s) | 90, 1053, 1283, 1401, 1545, 1783 |
| AlwI | GGATC | 5 cut(s) | 230, 401, 414, 644, 657 |
| Ama87I | CYCGRG | 1 cut(s) | 167 |
| AoxI | GGCC | 5 cut(s) | 352, 737, 1416, 1716, 1781 |
| ApeKI | GCWGC | 4 cut(s) | 44, 449, 1513, 1723 |
| ApoI | RAATTY | 5 cut(s) | 301, 415, 877, 986, 1164 |
| AseI | ATTAAT | 2 cut(s) | 1244, 1251 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 1185, 1227, 1431, 1639, 1962 |
| AspLEI | GCGC | 6 cut(s) | 77, 146, 223, 290, 780, 1381 |
| AspS9I | GGNCC | 5 cut(s) | 352, 1417, 1465, 1663, 1781 |
| AsuC2I | CCSGG | 1 cut(s) | 412 |
| AsuHPI | GGTGA | 3 cut(s) | 715, 2036, 2093 |
| AvaI | CYCGRG | 1 cut(s) | 167 |
| AvaII | GGWCC | 2 cut(s) | 1465, 1663 |
| BaeGI | GKGCMC | 1 cut(s) | 1161 |
| BamHI | GGATCC | 2 cut(s) | 406, 649 |
| BanI | GGYRCC | 1 cut(s) | 1934 |
| Bbv12I | GWGCWC | 2 cut(s) | 627, 1500 |
| BbvCI | CCTCAGC | 1 cut(s) | 1679 |
| BbvI | GCAGC | 4 cut(s) | 31, 436, 1500, 1735 |
| BccI | CCATC | 2 cut(s) | 1095, 2072 |
| BceAI | ACGGC | 2 cut(s) | 195, 1768 |
| BclI | TGATCA | 4 cut(s) | 658, 694, 1237, 1255 |
| BcnI | CCSGG | 1 cut(s) | 412 |
| BcoDI | GTCTC | 6 cut(s) | 90, 1053, 1283, 1401, 1545, 1783 |
| BcuI | ACTAGT | 1 cut(s) | 1901 |
| BfaI | CTAG | 6 cut(s) | 492, 1068, 1361, 1673, 1805, 1902 |
| BfmI | CTRYAG | 3 cut(s) | 190, 1081, 1514 |
| BfoI | RGCGCY | 2 cut(s) | 147, 781 |
| BglII | AGATCT | 1 cut(s) | 919 |
| BisI | GCNGC | 6 cut(s) | 24, 45, 54, 450, 1514, 1724 |
| BlpI | GCTNAGC | 2 cut(s) | 132, 344 |
| BlsI | GCNGC | 6 cut(s) | 25, 46, 55, 451, 1515, 1725 |
| Bme1390I | CCNGG | 1 cut(s) | 412 |
| Bme18I | GGWCC | 2 cut(s) | 1465, 1663 |
| BmeT110I | CYCGRG | 1 cut(s) | 167 |
| BmgT120I | GGNCC | 5 cut(s) | 352, 1417, 1465, 1663, 1781 |
| BmiI | GGNNCC | 8 cut(s) | 395, 408, 651, 1215, 1467, 1664, 1782, 1936 |
| BmrFI | CCNGG | 1 cut(s) | 412 |
| BmrI | ACTGGG | 1 cut(s) | 1938 |
| BmsI | GCATC | 4 cut(s) | 334, 625, 703, 1065 |
| BmuI | ACTGGG | 1 cut(s) | 1938 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1823, 1855 |
| BpmI | CTGGAG | 1 cut(s) | 65 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1679 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 132, 344 |
| BpuEI | CTTGAG | 2 cut(s) | 233, 2087 |
| BpuMI | CCSGG | 1 cut(s) | 412 |
| BsaAI | YACGTR | 2 cut(s) | 628, 1403 |
| BsaHI | GRCGYC | 1 cut(s) | 756 |
| BsaJI | CCNNGG | 2 cut(s) | 410, 580 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 700, 730, 1529, 1559 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 403, 969, 970 |
| Bse1I | ACTGG | 3 cut(s) | 82, 1933, 1938 |
| BseDI | CCNNGG | 2 cut(s) | 410, 580 |
| BseGI | GGATG | 4 cut(s) | 43, 881, 1087, 2083 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 403, 969, 970 |
| BseMII | CTCAG | 9 cut(s) | 101, 146, 335, 795, 1064, 1223, 1493, 1693, 1736 |
| BseNI | ACTGG | 3 cut(s) | 82, 1933, 1938 |
| BseRI | GAGGAG | 2 cut(s) | 485, 708 |
| BseSI | GKGCMC | 1 cut(s) | 1161 |
| BseXI | GCAGC | 4 cut(s) | 31, 436, 1500, 1735 |
| BseYI | CCCAGC | 1 cut(s) | 954 |
| BsgI | GTGCAG | 1 cut(s) | 1305 |
| Bsh1236I | CGCG | 5 cut(s) | 26, 75, 221, 290, 372 |
| BshFI | GGCC | 5 cut(s) | 354, 739, 1418, 1718, 1783 |
| BshNI | GGYRCC | 1 cut(s) | 1934 |
| BsiHKAI | GWGCWC | 2 cut(s) | 627, 1500 |
| BsiHKCI | CYCGRG | 1 cut(s) | 167 |
| BsiSI | CCGG | 1 cut(s) | 412 |
| BslFI | GGGAC | 1 cut(s) | 946 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 403, 969, 970 |
| BsmAI | GTCTC | 6 cut(s) | 90, 1053, 1283, 1401, 1545, 1783 |
| BsmFI | GGGAC | 1 cut(s) | 946 |
| BsmI | GAATGC | 1 cut(s) | 1074 |
| BsnI | GGCC | 5 cut(s) | 354, 739, 1418, 1718, 1783 |
| BsoBI | CYCGRG | 1 cut(s) | 167 |
| Bsp1286I | GDGCHC | 3 cut(s) | 627, 1161, 1500 |
| Bsp143I | GATC | 9 cut(s) | 235, 406, 464, 649, 658, 694, 919, 1237, 1255 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 132, 344 |
| BspACI | CCGC | 5 cut(s) | 24, 51, 54, 370, 436 |
| BspANI | GGCC | 5 cut(s) | 354, 739, 1418, 1718, 1783 |
| BspCNI | CTCAG | 9 cut(s) | 100, 145, 336, 794, 1063, 1222, 1492, 1692, 1737 |
| BspFNI | CGCG | 5 cut(s) | 26, 75, 221, 290, 372 |
| BspHI | TCATGA | 1 cut(s) | 1258 |
| BspLI | GGNNCC | 8 cut(s) | 395, 408, 651, 1215, 1467, 1664, 1782, 1936 |
| BspMAI | CTGCAG | 1 cut(s) | 1518 |
| BspPI | GGATC | 5 cut(s) | 230, 401, 414, 644, 657 |
| BspT107I | GGYRCC | 1 cut(s) | 1934 |
| BsrI | ACTGG | 3 cut(s) | 82, 1933, 1938 |
| BssECI | CCNNGG | 2 cut(s) | 410, 580 |
| BssMI | GATC | 9 cut(s) | 235, 406, 464, 649, 658, 694, 919, 1237, 1255 |
| BssNI | GRCGYC | 1 cut(s) | 756 |
| BssT1I | CCWWGG | 1 cut(s) | 580 |
| Bst4CI | ACNGT | 5 cut(s) | 703, 1340, 1659, 1794, 1913 |
| Bst6I | CTCTTC | 3 cut(s) | 726, 796, 1319 |
| BstACI | GRCGYC | 1 cut(s) | 756 |
| BstBAI | YACGTR | 2 cut(s) | 628, 1403 |
| BstC8I | GCNNGC | 3 cut(s) | 741, 1101, 1284 |
| BstF5I | GGATG | 4 cut(s) | 43, 881, 1087, 2083 |
| BstFNI | CGCG | 5 cut(s) | 26, 75, 221, 290, 372 |
| BstH2I | RGCGCY | 2 cut(s) | 147, 781 |
| BstHHI | GCGC | 6 cut(s) | 77, 146, 223, 290, 780, 1381 |
| BstKTI | GATC | 9 cut(s) | 238, 409, 467, 652, 661, 697, 922, 1240, 1258 |
| BstMAI | GTCTC | 6 cut(s) | 90, 1053, 1283, 1401, 1545, 1783 |
| BstMBI | GATC | 9 cut(s) | 235, 406, 464, 649, 658, 694, 919, 1237, 1255 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 50, 53, 59, 157 |
| BstSCI | CCNGG | 1 cut(s) | 410 |
| BstSFI | CTRYAG | 3 cut(s) | 190, 1081, 1514 |
| BstSLI | GKGCMC | 1 cut(s) | 1161 |
| BstUI | CGCG | 5 cut(s) | 26, 75, 221, 290, 372 |
| BstV1I | GCAGC | 4 cut(s) | 31, 436, 1500, 1735 |
| BstX2I | RGATCY | 3 cut(s) | 406, 649, 919 |
| BstYI | RGATCY | 3 cut(s) | 406, 649, 919 |
| BsuRI | GGCC | 5 cut(s) | 354, 739, 1418, 1718, 1783 |
| BtsCI | GGATG | 4 cut(s) | 43, 881, 1087, 2083 |
| BtsI | GCAGTG | 1 cut(s) | 1552 |
| BtsIMutI | CAGTG | 4 cut(s) | 839, 1552, 1918, 1945 |
| Cac8I | GCNNGC | 3 cut(s) | 741, 1101, 1284 |
| CciI | TCATGA | 1 cut(s) | 1258 |
| CfoI | GCGC | 6 cut(s) | 77, 146, 223, 290, 780, 1381 |
| Cfr13I | GGNCC | 5 cut(s) | 352, 1417, 1465, 1663, 1781 |
| CseI | GACGC | 1 cut(s) | 1260 |
| Csp6I | GTAC | 4 cut(s) | 548, 629, 1195, 1404 |
| CviAII | CATG | 7 cut(s) | 422, 531, 746, 1259, 1382, 1720, 1981 |
| CviQI | GTAC | 4 cut(s) | 548, 629, 1195, 1404 |
| DpnI | GATC | 9 cut(s) | 237, 408, 466, 651, 660, 696, 921, 1239, 1257 |
| DpnII | GATC | 9 cut(s) | 235, 406, 464, 649, 658, 694, 919, 1237, 1255 |
| DraI | TTTAAA | 1 cut(s) | 1975 |
| Eam1104I | CTCTTC | 3 cut(s) | 726, 796, 1319 |
| EarI | CTCTTC | 3 cut(s) | 726, 796, 1319 |
| EciI | GGCGGA | 1 cut(s) | 40 |
| Eco130I | CCWWGG | 1 cut(s) | 580 |
| Eco32I | GATATC | 1 cut(s) | 1819 |
| Eco47I | GGWCC | 2 cut(s) | 1465, 1663 |
| Eco57I | CTGAAG | 2 cut(s) | 996, 1446 |
| Eco88I | CYCGRG | 1 cut(s) | 167 |
| EcoRV | GATATC | 1 cut(s) | 1819 |
| EcoT14I | CCWWGG | 1 cut(s) | 580 |
| ErhI | CCWWGG | 1 cut(s) | 580 |
| FaeI | CATG | 7 cut(s) | 425, 534, 749, 1262, 1385, 1723, 1984 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1419, 1451 |
| FaqI | GGGAC | 1 cut(s) | 946 |
| FatI | CATG | 7 cut(s) | 421, 530, 745, 1258, 1381, 1719, 1980 |
| FauNDI | CATATG | 1 cut(s) | 1191 |
| FbaI | TGATCA | 4 cut(s) | 658, 694, 1237, 1255 |
| FblI | GTMKAC | 1 cut(s) | 1606 |
| Fnu4HI | GCNGC | 6 cut(s) | 24, 45, 54, 450, 1514, 1724 |
| FokI | GGATG | 4 cut(s) | 50, 868, 1074, 2090 |
| Fsp4HI | GCNGC | 6 cut(s) | 24, 45, 54, 450, 1514, 1724 |
| FspBI | CTAG | 6 cut(s) | 492, 1068, 1361, 1673, 1805, 1902 |
| GlaI | GCGC | 6 cut(s) | 76, 145, 222, 289, 779, 1380 |
| GluI | GCNGC | 6 cut(s) | 24, 45, 54, 450, 1514, 1724 |
| GsaI | CCCAGC | 1 cut(s) | 958 |
| GsuI | CTGGAG | 1 cut(s) | 65 |
| HaeII | RGCGCY | 2 cut(s) | 147, 781 |
| HaeIII | GGCC | 5 cut(s) | 354, 739, 1418, 1718, 1783 |
| HapII | CCGG | 1 cut(s) | 412 |
| HgaI | GACGC | 1 cut(s) | 1260 |
| HhaI | GCGC | 6 cut(s) | 77, 146, 223, 290, 780, 1381 |
| Hin1I | GRCGYC | 1 cut(s) | 756 |
| Hin1II | CATG | 7 cut(s) | 425, 534, 749, 1262, 1385, 1723, 1984 |
| Hin6I | GCGC | 6 cut(s) | 75, 144, 221, 288, 778, 1379 |
| HinP1I | GCGC | 6 cut(s) | 75, 144, 221, 288, 778, 1379 |
| HindIII | AAGCTT | 3 cut(s) | 380, 1017, 1352 |
| HinfI | GANTC | 9 cut(s) | 170, 230, 242, 749, 788, 824, 844, 899, 1538 |
| HpaII | CCGG | 1 cut(s) | 412 |
| HphI | GGTGA | 3 cut(s) | 715, 2036, 2093 |
| Hpy166II | GTNNAC | 4 cut(s) | 548, 631, 1118, 1607 |
| Hpy8I | GTNNAC | 4 cut(s) | 548, 631, 1118, 1607 |
| Hpy99I | CGWCG | 1 cut(s) | 206 |
| HpyAV | CCTTC | 5 cut(s) | 595, 863, 1144, 1513, 1700 |
| HpyCH4III | ACNGT | 5 cut(s) | 703, 1340, 1659, 1794, 1913 |
| HpyCH4IV | ACGT | 3 cut(s) | 627, 756, 1402 |
| HpyCH4V | TGCA | 8 cut(s) | 4, 452, 912, 1286, 1516, 1723, 2015, 2092 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 50, 53, 59, 157 |
| HpySE526I | ACGT | 3 cut(s) | 627, 756, 1402 |
| Hsp92I | GRCGYC | 1 cut(s) | 756 |
| Hsp92II | CATG | 7 cut(s) | 425, 534, 749, 1262, 1385, 1723, 1984 |
| HspAI | GCGC | 6 cut(s) | 75, 144, 221, 288, 778, 1379 |
| Ksp22I | TGATCA | 4 cut(s) | 658, 694, 1237, 1255 |
| Kzo9I | GATC | 9 cut(s) | 235, 406, 464, 649, 658, 694, 919, 1237, 1255 |
| LmnI | GCTCC | 3 cut(s) | 317, 721, 1213 |
| Lsp1109I | GCAGC | 4 cut(s) | 31, 436, 1500, 1735 |
| LweI | GCATC | 4 cut(s) | 334, 625, 703, 1065 |
| MaeI | CTAG | 6 cut(s) | 492, 1068, 1361, 1673, 1805, 1902 |
| MaeII | ACGT | 3 cut(s) | 627, 756, 1402 |
| MaeIII | GTNAC | 7 cut(s) | 973, 1470, 1522, 1748, 1800, 1913, 1924 |
| MalI | GATC | 9 cut(s) | 237, 408, 466, 651, 660, 696, 921, 1239, 1257 |
| MboI | GATC | 9 cut(s) | 235, 406, 464, 649, 658, 694, 919, 1237, 1255 |
| MfeI | CAATTG | 2 cut(s) | 137, 1701 |
| MflI | RGATCY | 3 cut(s) | 406, 649, 919 |
| MhlI | GDGCHC | 3 cut(s) | 627, 1161, 1500 |
| MlyI | GAGTC | 5 cut(s) | 179, 236, 239, 782, 1547 |
| MmeI | TCCRAC | 5 cut(s) | 123, 384, 1443, 1794, 1886 |
| MnlI | CCTC | 9 cut(s) | 24, 28, 227, 463, 466, 729, 1688, 1708, 1890 |
| MroXI | GAANNNNTTC | 5 cut(s) | 1185, 1227, 1431, 1639, 1962 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2068 |
| MspA1I | CMGCKG | 2 cut(s) | 958, 1027 |
| MspI | CCGG | 1 cut(s) | 412 |
| MspR9I | CCNGG | 1 cut(s) | 412 |
| MunI | CAATTG | 2 cut(s) | 137, 1701 |
| Mva1269I | GAATGC | 1 cut(s) | 1074 |
| MvnI | CGCG | 5 cut(s) | 26, 75, 221, 290, 372 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 50, 53, 59, 157 |
| NciI | CCSGG | 1 cut(s) | 412 |
| NdeI | CATATG | 1 cut(s) | 1191 |
| NdeII | GATC | 9 cut(s) | 235, 406, 464, 649, 658, 694, 919, 1237, 1255 |
| NlaIII | CATG | 7 cut(s) | 425, 534, 749, 1262, 1385, 1723, 1984 |
| NlaIV | GGNNCC | 8 cut(s) | 395, 408, 651, 1215, 1467, 1664, 1782, 1936 |
| NmuCI | GTSAC | 3 cut(s) | 1800, 1913, 1924 |
| OliI | CACNNNNGTG | 1 cut(s) | 2068 |
| PagI | TCATGA | 1 cut(s) | 1258 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 225 |
| PctI | GAATGC | 1 cut(s) | 1074 |
| PdmI | GAANNNNTTC | 5 cut(s) | 1185, 1227, 1431, 1639, 1962 |
| PfeI | GAWTC | 4 cut(s) | 749, 824, 844, 899 |
| PflFI | GACNNNGTC | 1 cut(s) | 1270 |
| PkrI | GCNGC | 6 cut(s) | 25, 46, 55, 451, 1515, 1725 |
| PleI | GAGTC | 5 cut(s) | 178, 236, 238, 782, 1546 |
| PpsI | GAGTC | 5 cut(s) | 178, 236, 238, 782, 1546 |
| Ppu21I | YACGTR | 2 cut(s) | 628, 1403 |
| PshBI | ATTAAT | 2 cut(s) | 1244, 1251 |
| PspFI | CCCAGC | 1 cut(s) | 954 |
| PspN4I | GGNNCC | 8 cut(s) | 395, 408, 651, 1215, 1467, 1664, 1782, 1936 |
| PspPI | GGNCC | 5 cut(s) | 352, 1417, 1465, 1663, 1781 |
| PstI | CTGCAG | 1 cut(s) | 1518 |
| PsuI | RGATCY | 3 cut(s) | 406, 649, 919 |
| PsyI | GACNNNGTC | 1 cut(s) | 1270 |
| PvuII | CAGCTG | 2 cut(s) | 958, 1027 |
| RsaI | GTAC | 4 cut(s) | 549, 630, 1196, 1405 |
| RsaNI | GTAC | 4 cut(s) | 548, 629, 1195, 1404 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2068 |
| SatI | GCNGC | 6 cut(s) | 24, 45, 54, 450, 1514, 1724 |
| Sau3AI | GATC | 9 cut(s) | 235, 406, 464, 649, 658, 694, 919, 1237, 1255 |
| Sau96I | GGNCC | 5 cut(s) | 352, 1417, 1465, 1663, 1781 |
| SchI | GAGTC | 5 cut(s) | 179, 236, 239, 782, 1547 |
| ScrFI | CCNGG | 1 cut(s) | 412 |
| SduI | GDGCHC | 3 cut(s) | 627, 1161, 1500 |
| SfaNI | GCATC | 4 cut(s) | 334, 625, 703, 1065 |
| SfcI | CTRYAG | 3 cut(s) | 190, 1081, 1514 |
| SinI | GGWCC | 2 cut(s) | 1465, 1663 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2068 |
| SmlI | CTYRAG | 2 cut(s) | 248, 2066 |
| SmoI | CTYRAG | 2 cut(s) | 248, 2066 |
| SpeI | ACTAGT | 1 cut(s) | 1901 |
| SsiI | CCGC | 5 cut(s) | 24, 51, 54, 370, 436 |
| SspMI | CTAG | 6 cut(s) | 492, 1068, 1361, 1673, 1805, 1902 |
| StyD4I | CCNGG | 1 cut(s) | 410 |
| StyI | CCWWGG | 1 cut(s) | 580 |
| TaaI | ACNGT | 5 cut(s) | 703, 1340, 1659, 1794, 1913 |
| TaiI | ACGT | 3 cut(s) | 630, 759, 1405 |
| TaqI | TCGA | 4 cut(s) | 261, 331, 767, 1643 |
| TatI | WGTACW | 1 cut(s) | 547 |
| TauI | GCSGC | 2 cut(s) | 26, 56 |
| TfiI | GAWTC | 4 cut(s) | 749, 824, 844, 899 |
| TscAI | CASTG | 4 cut(s) | 846, 1559, 1918, 1945 |
| TseFI | GTSAC | 3 cut(s) | 1800, 1913, 1924 |
| TseI | GCWGC | 4 cut(s) | 44, 449, 1513, 1723 |
| Tsp45I | GTSAC | 3 cut(s) | 1800, 1913, 1924 |
| TspGWI | ACGGA | 4 cut(s) | 21, 330, 662, 792 |
| TspRI | CASTG | 4 cut(s) | 846, 1559, 1918, 1945 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1270 |
| VpaK11BI | GGWCC | 2 cut(s) | 1465, 1663 |
| VspI | ATTAAT | 2 cut(s) | 1244, 1251 |
| XapI | RAATTY | 5 cut(s) | 301, 415, 877, 986, 1164 |
| XmiI | GTMKAC | 1 cut(s) | 1606 |
| XmnI | GAANNNNTTC | 5 cut(s) | 1185, 1227, 1431, 1639, 1962 |
| XspI | CTAG | 6 cut(s) | 492, 1068, 1361, 1673, 1805, 1902 |
| ZraI | GACGTC | 1 cut(s) | 757 |