Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0007155

Physical Location & Seq

Genomic Coordinates Forward (+)

46675239 .. 46677406

Gene Structure 2168 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G572600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1380 bp

ATGCACGGACGACCCCGCAAAGCCCCGACAAGAGAAGATGAAGCAGGTTCAGCAGGCAAGGGCAAAAAGCTTGGGTCCCTCCAGTCTCAACTCCTATACAACCACCACAAGAAGATTTATAACGAGGAAGCTCTCGACCTCAGTGCCAAAACCCTCCAGATAAACCCCGACTTTTACACTGCTTGGAACTACAGAAAGCTCGCTGTCCAACACAAACTCGCTGCTTCCCACCCAGACTTCAACTCCATTTTCGACCCAGAACTTAGACTGGTTGAGATTGCGTTGGGAACGAATCCTAAAGCCTACGGAGCGTGGTATCATCGTGAATGGGTGCTAAGAAGGCTAAGCAAGGCTCATTCTTCTTCATCTTATTTGAATGATTATTTAGACCACGAACTCCAGCTTCTTGAAACATTGCTCAAGCGTGATTCCCGTAATTTCCATGCTTGGAATCACTGCAGATTTCTAGCTGCATTGTTCAATACATCAGACCATGAGGAATTGAAGTTTACCAACGAAATGATACAAGATAACCAGGACAATTTGAGCAATTACTCAGTGTGGCACCATCGTAGAGTACTTCTGTCTGGTTTGCTGAAGAAAAAGGCTCAAGGATTTTCCTCAAAAGAGAAGGTTTTGCATGATGAGTATGAGCTTGTGGACGGTGCTATTGTCGCGGGTACGGAAGATCAAAGTGGTTGGTTTTATCATTTTTCACTTCTTGAGCAAACGGTGAACGTGGATGCTCCTTTTCTTGTTTCTTCTTGGCCTTCCCATGGATCTAATGTCCTTCTATCGAGAAATAGGTGCTCAGATGACTGTTCTTTGTCTCAGTTTGACAGCTTCCATTCCAGTTCAGGAACATTTCCACTGATACTTTATTTTACTAAAGCTGTTCAAGGTGTAAATTCATCGACAATAACCATTGAATCTTCGTTTTGCACAAAAAATGATCTGCACTGGACTCCACTTATACAAAATAGATCCCAGTTTTTCCAAGCTTGGGTTACTCATATTATATTTCCAGCTGCAAACCCTCATTCTTCTGAACCTTATCTGCTGGAAATTAGTGTTGGACAGTCTCAGGGCATCATATCTCAAAACGGCTTTCCTTATAGCCATCCGACACAGTTTAACTTCAAAGTGCATCTATGCCTGGGAGAAACTGAACGAGGTAAAGTTGAAGACCTGGATGGGGATATAATTTTGTGGAAGGATGAAAATTTTCATGCACTCCAAACAAAATCGCAGGAGCCACATGAAGTAGTTTCTCTTGATCAGCTAATTATTAATGATGTTCATGAGCCAAACACTTCAAATTGGCGTGCAGCGATTGTTGCTAATGAAATAGATTTATTCCAGAACTTGTTATTCTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003008 GO:0003674 GO:0003824 GO:0004659 GO:0004661 GO:0004663 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0005886 GO:0005968 GO:0006464 GO:0006807 GO:0007600 GO:0007601 GO:0008150 GO:0008152 GO:0008318 GO:0009987 GO:0010035 GO:0010038 GO:0010941 GO:0016020 GO:0016740 GO:0016765 GO:0017016 GO:0017137 GO:0018342 GO:0018344 GO:0019538 GO:0019899 GO:0031267 GO:0031974 GO:0031981 GO:0032501 GO:0032991 GO:0036211 GO:0042221 GO:0042981 GO:0043067 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043687 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0050789 GO:0050794 GO:0050877 GO:0050896 GO:0050953 GO:0051020 GO:0065007 GO:0070013 GO:0071704 GO:0071944 GO:0097354 GO:0140096 GO:1901564 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_4 LRR_6 PPTA

Protein Analysis

460

Amino Acids

52.6

Weight (kDa)

6.07

Isoelectric Point (pI)

39.96

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007155)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24490 AT4G24490 AT5G41820 AT5G41820
fragaria_vesca	FvH4_5g35190 FvH4_5g35190 FvH4_5g35190 FvH4_5g35190
malus_domestica	MD08G1200000.v1.1 MD15G1387100.v1.1
prunus_persica	Prupe.1G533400_v2.0.a1 Prupe.1G572600_v2.0.a1
pyrus_communis	pycom08g17340 pycom15g34720
rosa_chinensis	RchiOBHm_Chr7g0236311
rosa_laevigata	RLG00000001088
rosa_multiflora	Rmu_sc0005716.1_g000009 Rmu_sc0006268.1_g000006
rosa_roxburghii	Rroxscaffold_3G00225260
rosa_rugosa	Rorug07G0295400
rosa_samantha	Rh7AG450600 Rh7BG422100 Rh7CG470300 Rh7DG439600
rosa_wichuraiana	Rw7G037450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	120
Acc36I	ACCTGC	1 cut(s)	35
AccB1I	GGYRCC	1 cut(s)	564
AccII	CGCG	1 cut(s)	677
AciI	CCGC	2 cut(s)	16, 677
AclWI	GGATC	2 cut(s)	787, 978
AcsI	RAATTY	2 cut(s)	907, 1222
AcuI	CTGAAG	1 cut(s)	617
AfaI	GTAC	2 cut(s)	579, 682
AfiI	CCNNNNNNNGG	3 cut(s)	776, 1003, 1195
AjnI	CCWGG	3 cut(s)	534, 1155, 1188
AjuI	GAANNNNNNNTTGG	2 cut(s)	1056, 1088
Alw21I	GWGCWC	1 cut(s)	812
Alw26I	GTCTC	3 cut(s)	90, 834, 1086
AlwI	GGATC	2 cut(s)	787, 978
AoxI	GGCC	1 cut(s)	767
ApeKI	GCWGC	4 cut(s)	221, 470, 1028, 1328
ApoI	RAATTY	2 cut(s)	907, 1222
AseI	ATTAAT	1 cut(s)	1290
Asp700I	GAANNNNTTC	1 cut(s)	1224
AspS9I	GGNCC	1 cut(s)	75
AsuHPI	GGTGA	1 cut(s)	745
AvaII	GGWCC	1 cut(s)	75
BanI	GGYRCC	1 cut(s)	564
BbsI	GAAGAC	1 cut(s)	1191
Bbv12I	GWGCWC	1 cut(s)	812
BbvI	GCAGC	4 cut(s)	208, 457, 1015, 1340
BccI	CCATC	3 cut(s)	576, 1128, 1187
BceAI	ACGGC	1 cut(s)	1120
BcgI	CGANNNNNNTGC	2 cut(s)	125, 159
BciT130I	CCWGG	3 cut(s)	536, 1157, 1190
BclI	TGATCA	1 cut(s)	1276
BcoDI	GTCTC	3 cut(s)	90, 834, 1086
BfaI	CTAG	1 cut(s)	467
BfmI	CTRYAG	2 cut(s)	190, 457
BfuAI	ACCTGC	1 cut(s)	35
BisI	GCNGC	4 cut(s)	222, 471, 1029, 1329
BlpI	GCTNAGC	1 cut(s)	344
BlsI	GCNGC	4 cut(s)	223, 472, 1030, 1330
BmcAI	AGTACT	1 cut(s)	579
Bme1390I	CCNGG	3 cut(s)	536, 1157, 1190
Bme18I	GGWCC	1 cut(s)	75
BmgT120I	GGNCC	1 cut(s)	75
BmiI	GGNNCC	4 cut(s)	76, 77, 566, 1254
BmrFI	CCNGG	3 cut(s)	536, 1157, 1190
BmrI	ACTGGG	1 cut(s)	982
BmsI	GCATC	3 cut(s)	733, 1098, 1156
BmuI	ACTGGG	1 cut(s)	982
BpiI	GAAGAC	1 cut(s)	1191
BpmI	CTGGAG	3 cut(s)	65, 140, 383
Bpu1102I	GCTNAGC	1 cut(s)	344
BpuEI	CTTGAG	3 cut(s)	404, 594, 743
BsaJI	CCNNGG	2 cut(s)	775, 1156
BsaXI	ACNNNNNCTCC	2 cut(s)	227, 257
Bsc4I	CCNNNNNNNGG	3 cut(s)	776, 1003, 1195
Bse1I	ACTGG	5 cut(s)	82, 273, 852, 965, 988
Bse3DI	GCAATG	1 cut(s)	413
BseBI	CCWGG	3 cut(s)	536, 1157, 1190
BseDI	CCNNGG	2 cut(s)	775, 1156
BseGI	GGATG	4 cut(s)	748, 1120, 1198, 1222
BseLI	CCNNNNNNNGG	3 cut(s)	776, 1003, 1195
BseMI	GCAATG	1 cut(s)	413
BseMII	CTCAG	5 cut(s)	154, 570, 825, 845, 1097
BseNI	ACTGG	5 cut(s)	82, 273, 852, 965, 988
BseXI	GCAGC	4 cut(s)	208, 457, 1015, 1340
BsgI	GTGCAG	2 cut(s)	941, 1347
Bsh1236I	CGCG	1 cut(s)	677
BshFI	GGCC	1 cut(s)	769
BshNI	GGYRCC	1 cut(s)	564
BsiHKAI	GWGCWC	1 cut(s)	812
BslFI	GGGAC	1 cut(s)	61
BslI	CCNNNNNNNGG	3 cut(s)	776, 1003, 1195
BsmAI	GTCTC	3 cut(s)	90, 834, 1086
BsmFI	GGGAC	1 cut(s)	61
BsnI	GGCC	1 cut(s)	769
Bsp1286I	GDGCHC	1 cut(s)	812
Bsp143I	GATC	5 cut(s)	688, 779, 952, 983, 1276
Bsp1720I	GCTNAGC	1 cut(s)	344
Bsp19I	CCATGG	1 cut(s)	775
BspACI	CCGC	2 cut(s)	16, 677
BspANI	GGCC	1 cut(s)	769
BspCNI	CTCAG	5 cut(s)	153, 569, 824, 844, 1096
BspFNI	CGCG	1 cut(s)	677
BspHI	TCATGA	1 cut(s)	1300
BspLI	GGNNCC	4 cut(s)	76, 77, 566, 1254
BspMAI	CTGCAG	1 cut(s)	461
BspMI	ACCTGC	1 cut(s)	35
BspPI	GGATC	2 cut(s)	787, 978
BspT107I	GGYRCC	1 cut(s)	564
BsrDI	GCAATG	1 cut(s)	413
BsrI	ACTGG	5 cut(s)	82, 273, 852, 965, 988
BssECI	CCNNGG	2 cut(s)	775, 1156
BssMI	GATC	5 cut(s)	688, 779, 952, 983, 1276
BssT1I	CCWWGG	1 cut(s)	775
Bst2UI	CCWGG	3 cut(s)	536, 1157, 1190
Bst4CI	ACNGT	5 cut(s)	665, 733, 821, 1080, 1131
BstC8I	GCNNGC	3 cut(s)	55, 201, 1326
BstDEI	CTNAG	8 cut(s)	140, 263, 335, 344, 556, 811, 831, 1083
BstDSI	CCRYGG	1 cut(s)	775
BstF5I	GGATG	4 cut(s)	748, 1120, 1198, 1222
BstFNI	CGCG	1 cut(s)	677
BstKTI	GATC	5 cut(s)	691, 782, 955, 986, 1279
BstMAI	GTCTC	3 cut(s)	90, 834, 1086
BstMBI	GATC	5 cut(s)	688, 779, 952, 983, 1276
BstMWI	GCNNNNNNNGC	5 cut(s)	50, 308, 340, 674, 1337
BstNI	CCWGG	3 cut(s)	536, 1157, 1190
BstSCI	CCNGG	3 cut(s)	534, 1155, 1188
BstSFI	CTRYAG	2 cut(s)	190, 457
BstUI	CGCG	1 cut(s)	677
BstV1I	GCAGC	4 cut(s)	208, 457, 1015, 1340
BstV2I	GAAGAC	1 cut(s)	1191
BstX2I	RGATCY	2 cut(s)	779, 983
BstYI	RGATCY	2 cut(s)	779, 983
BsuRI	GGCC	1 cut(s)	769
BtgI	CCRYGG	1 cut(s)	775
BtsCI	GGATG	4 cut(s)	748, 1120, 1198, 1222
BtsI	GCAGTG	2 cut(s)	177, 454
BtsIMutI	CAGTG	6 cut(s)	148, 177, 454, 564, 869, 958
BveI	ACCTGC	1 cut(s)	35
Cac8I	GCNNGC	3 cut(s)	55, 201, 1326
CciI	TCATGA	1 cut(s)	1300
Cfr13I	GGNCC	1 cut(s)	75
Csp6I	GTAC	2 cut(s)	578, 681
CviAII	CATG	7 cut(s)	443, 494, 641, 776, 1229, 1259, 1301
CviQI	GTAC	2 cut(s)	578, 681
DdeI	CTNAG	8 cut(s)	140, 263, 335, 344, 556, 811, 831, 1083
DpnI	GATC	5 cut(s)	690, 781, 954, 985, 1278
DpnII	GATC	5 cut(s)	688, 779, 952, 983, 1276
Eco130I	CCWWGG	1 cut(s)	775
Eco47I	GGWCC	1 cut(s)	75
Eco57I	CTGAAG	1 cut(s)	617
EcoO109I	RGGNCCY	1 cut(s)	75
EcoRII	CCWGG	3 cut(s)	534, 1155, 1188
EcoT14I	CCWWGG	1 cut(s)	775
ErhI	CCWWGG	1 cut(s)	775
FaeI	CATG	7 cut(s)	446, 497, 644, 779, 1232, 1262, 1304
FaqI	GGGAC	1 cut(s)	61
FatI	CATG	7 cut(s)	442, 493, 640, 775, 1228, 1258, 1300
FauI	CCCGC	2 cut(s)	23, 670
FbaI	TGATCA	1 cut(s)	1276
Fnu4HI	GCNGC	4 cut(s)	222, 471, 1029, 1329
FokI	GGATG	4 cut(s)	755, 1107, 1205, 1229
Fsp4HI	GCNGC	4 cut(s)	222, 471, 1029, 1329
FspBI	CTAG	1 cut(s)	467
GluI	GCNGC	4 cut(s)	222, 471, 1029, 1329
GsuI	CTGGAG	3 cut(s)	65, 140, 383
HaeIII	GGCC	1 cut(s)	769
Hin1II	CATG	7 cut(s)	446, 497, 644, 779, 1232, 1262, 1304
HindIII	AAGCTT	2 cut(s)	68, 999
HinfI	GANTC	5 cut(s)	292, 428, 451, 929, 964
HphI	GGTGA	1 cut(s)	745
Hpy166II	GTNNAC	3 cut(s)	510, 661, 736
Hpy188I	TCNGA	4 cut(s)	490, 814, 1048, 1125
Hpy8I	GTNNAC	3 cut(s)	510, 661, 736
HpyAV	CCTTC	5 cut(s)	333, 625, 780, 800, 1207
HpyCH4III	ACNGT	5 cut(s)	665, 733, 821, 1080, 1131
HpyCH4IV	ACGT	1 cut(s)	738
HpyF10VI	GCNNNNNNNGC	5 cut(s)	50, 308, 340, 674, 1337
HpyF3I	CTNAG	8 cut(s)	140, 263, 335, 344, 556, 811, 831, 1083
HpySE526I	ACGT	1 cut(s)	738
Hsp92II	CATG	7 cut(s)	446, 497, 644, 779, 1232, 1262, 1304
KflI	GGGWCCC	1 cut(s)	75
Ksp22I	TGATCA	1 cut(s)	1276
Kzo9I	GATC	5 cut(s)	688, 779, 952, 983, 1276
LmnI	GCTCC	3 cut(s)	308, 751, 1252
Lsp1109I	GCAGC	4 cut(s)	208, 457, 1015, 1340
LweI	GCATC	3 cut(s)	733, 1098, 1156
MaeI	CTAG	1 cut(s)	467
MaeII	ACGT	1 cut(s)	738
MaeIII	GTNAC	1 cut(s)	1006
MalI	GATC	5 cut(s)	690, 781, 954, 985, 1278
MboI	GATC	5 cut(s)	688, 779, 952, 983, 1276
MflI	RGATCY	2 cut(s)	779, 983
MhlI	GDGCHC	1 cut(s)	812
MlyI	GAGTC	1 cut(s)	958
MmeI	TCCRAC	3 cut(s)	232, 1054, 1148
MnlI	CCTC	8 cut(s)	89, 118, 149, 164, 490, 631, 1047, 1166
MroXI	GAANNNNTTC	1 cut(s)	1224
MseI	TTAA	2 cut(s)	1134, 1290
MspA1I	CMGCKG	1 cut(s)	1028
MspR9I	CCNGG	3 cut(s)	536, 1157, 1190
MvaI	CCWGG	3 cut(s)	536, 1157, 1190
MvnI	CGCG	1 cut(s)	677
MwoI	GCNNNNNNNGC	5 cut(s)	50, 308, 340, 674, 1337
NcoI	CCATGG	1 cut(s)	775
NdeII	GATC	5 cut(s)	688, 779, 952, 983, 1276
NlaIII	CATG	7 cut(s)	446, 497, 644, 779, 1232, 1262, 1304
NlaIV	GGNNCC	4 cut(s)	76, 77, 566, 1254
PagI	TCATGA	1 cut(s)	1300
PdmI	GAANNNNTTC	1 cut(s)	1224
PfeI	GAWTC	4 cut(s)	292, 428, 451, 929
PkrI	GCNGC	4 cut(s)	223, 472, 1030, 1330
PleI	GAGTC	1 cut(s)	958
PpsI	GAGTC	1 cut(s)	958
PpuMI	RGGWCCY	1 cut(s)	75
PshBI	ATTAAT	1 cut(s)	1290
PsiI	TTATAA	1 cut(s)	120
Psp5II	RGGWCCY	1 cut(s)	75
Psp6I	CCWGG	3 cut(s)	534, 1155, 1188
PspGI	CCWGG	3 cut(s)	534, 1155, 1188
PspN4I	GGNNCC	4 cut(s)	76, 77, 566, 1254
PspPI	GGNCC	1 cut(s)	75
PspPPI	RGGWCCY	1 cut(s)	75
PstI	CTGCAG	1 cut(s)	461
PsuI	RGATCY	2 cut(s)	779, 983
PvuII	CAGCTG	1 cut(s)	1028
RsaI	GTAC	2 cut(s)	579, 682
RsaNI	GTAC	2 cut(s)	578, 681
SaqAI	TTAA	2 cut(s)	1134, 1290
SatI	GCNGC	4 cut(s)	222, 471, 1029, 1329
Sau3AI	GATC	5 cut(s)	688, 779, 952, 983, 1276
Sau96I	GGNCC	1 cut(s)	75
ScaI	AGTACT	1 cut(s)	579
SchI	GAGTC	1 cut(s)	958
ScrFI	CCNGG	3 cut(s)	536, 1157, 1190
SduI	GDGCHC	1 cut(s)	812
SfaNI	GCATC	3 cut(s)	733, 1098, 1156
SfcI	CTRYAG	2 cut(s)	190, 457
SinI	GGWCC	1 cut(s)	75
SmlI	CTYRAG	3 cut(s)	419, 609, 722
SmoI	CTYRAG	3 cut(s)	419, 609, 722
SsiI	CCGC	2 cut(s)	16, 677
SspMI	CTAG	1 cut(s)	467
StyD4I	CCNGG	3 cut(s)	534, 1155, 1188
StyI	CCWWGG	1 cut(s)	775
TaaI	ACNGT	5 cut(s)	665, 733, 821, 1080, 1131
TaiI	ACGT	1 cut(s)	741
TaqI	TCGA	4 cut(s)	135, 252, 797, 914
TatI	WGTACW	1 cut(s)	577
TfiI	GAWTC	4 cut(s)	292, 428, 451, 929
Tru1I	TTAA	2 cut(s)	1134, 1290
Tru9I	TTAA	2 cut(s)	1134, 1290
TscAI	CASTG	6 cut(s)	148, 184, 461, 564, 876, 965
TseI	GCWGC	4 cut(s)	221, 470, 1028, 1328
TspDTI	ATGAA	8 cut(s)	54, 354, 900, 1217, 1233, 1275, 1289, 1359
TspGWI	ACGGA	3 cut(s)	21, 321, 698
TspRI	CASTG	6 cut(s)	148, 184, 461, 564, 876, 965
VpaK11BI	GGWCC	1 cut(s)	75
VspI	ATTAAT	1 cut(s)	1290
XapI	RAATTY	2 cut(s)	907, 1222
XmnI	GAANNNNTTC	1 cut(s)	1224
XspI	CTAG	1 cut(s)	467
ZrmI	AGTACT	1 cut(s)	579

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.