Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0007155

Physical Location & Seq

Genomic Coordinates Forward (+)

47880166 .. 47884125

Gene Structure 3960 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1387100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1644 bp

ATGCACGGACAACCTCGGAAACCAGCGAAGCCGGAAGACGAAGCCGCTTCCGCCGCCAGAGCCGAAGCGCTCCGGGCTCTCCAGTCGCACTTCTTCTCCAATCACCACAACAAGGTTTACACCGACGAAGCCTTACAGTTGAGCGGCAAACTCCTCGAGCAAAACCCCGAGTTCTACACCGCTTGGAACTACCGAAAACTCGTCGTCCAGCAAAACCTCGATCGGTGCTCCGAGTCCGATCCCGACTCGCTCAAGTCCATCATCGACCGAGAACTCAAACTCGTAGAAAGTGCTCTGAGACAAAATTTTAAGTCCTACGGAGCTTGGCATCATCGAAAATGGGTGCTAAGCAAGGGGCGTTCGGTTTTAGACCGCGAAATGAAGCTTCTCAAGCAGTTTCAGCAGCTGGATCCCCGGAATTTTCATGCTTGGAACTACCGGAGGTTTGTTGCTGCATTGTTGAACCGATCGGACGAGGAAGAGTTGGAGTATACTAGGGAAATGATAGAAAACAATTTCAGCAATTACTCAGCCTGGCATAATCGTAGTGTGCTCCTGTCTAATTTGATGAAGAAAAAGGCTCAAGGGTTTTTCCCAAAAGAGAAGGTTCTGAACGATGAGTATGAGCATGTACACGATGCTATTTTTACGGATCCGGATGATCAAAGTGGTTGGTTTTATTATATTTGGCTTCTTGATCAAACGATGAAAACAGATGCTCCTCTTCTTGTTTCTTCCTGGCCGGCCCATGGTTCTAATGTAATTTTGTCGAGAAATAGGCACGCAAGTGACTATTCTTCGTCTCCATTTGGTAGTTTCCATTCTGATTCAGGAACAGTACCACTGATTATTTATTTCAATCAAGCTGTTGAAGGTGTAAACTCATCCAGTATAACCATTGAATCTTCATTTTCCACAAAAGATCTTGTTTGGAAACCAGTCTTACAAAATAACTCCCATCTCTCCCAAGTTTGGGTTACACATATTAAATTTCCGGATGCAAAGGCCCAGTCTTCAGAAGCTTATCAGCTGAAAGTTAGTGTTGGGCAGACTCAGGGTCTCATTTCTGCAAGTGGCTTTCATTATAGCCATCCTACCCAGTTTGCATTCAAAGTGTGTGTATGCCCTATTGAAACTGAACCAGCAGAAAAGCAGGGCGAGGACATAGTTTTGTGGAAAGATGAAAATTTTCACGCGTACCAAACACAATCTCAGGAGCTACATGAGGTAGTTCCTATTGGTCAACTAAGTATTAATGATGTCCATGAGCCTACGGCTTCAAATTGGCGTGCAGAGAGTATTGCTAATGAAATAGCACTCTTCCGAGAATTGGTGTCAGAGATAAATTGTAAAATTGGAAAGCTTACACTAGCAAGGCTATTAACAGCTCATGATGTTATCCTGTCTCCGTGTACAAACAAAATGGTCCACTCTGATGAAGTTCTTCAACTATATACTGACTTAATAAAGTTGGACCCATCACATTCTCAGTATTACAAAGACGAGCACAGCCTAGTTTTCCTGCGGAAGGTAATTACCTCTTCTCCACCTCTTGTAGTAGGTTATGATCCTCTATTCTTTCAGGGTGATGCTGTTGCATGTGCTTCTGGATTTATATTCTTCTGTGACTGTATCAGTGGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003008 GO:0003674 GO:0003824 GO:0004659 GO:0004661 GO:0004663 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0005886 GO:0005968 GO:0006464 GO:0006807 GO:0007600 GO:0007601 GO:0008150 GO:0008152 GO:0008318 GO:0009987 GO:0010035 GO:0010038 GO:0010941 GO:0016020 GO:0016740 GO:0016765 GO:0017016 GO:0017137 GO:0018342 GO:0018344 GO:0019538 GO:0019899 GO:0031267 GO:0031974 GO:0031981 GO:0032501 GO:0032991 GO:0036211 GO:0042221 GO:0042981 GO:0043067 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043687 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0050789 GO:0050794 GO:0050877 GO:0050896 GO:0050953 GO:0051020 GO:0065007 GO:0070013 GO:0071704 GO:0071944 GO:0097354 GO:0140096 GO:1901564 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_4 LRR_6 PPTA

Protein Analysis

548

Amino Acids

62.48

Weight (kDa)

6.0

Isoelectric Point (pI)

43.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPTA	PF01239	42 - 71	7e-07	Protein prenyltransferase alpha subunit repeat
PPTA	PF01239	89 - 118	2.6e-09	Protein prenyltransferase alpha subunit repeat
PPTA	PF01239	123 - 151	4.9e-07	Protein prenyltransferase alpha subunit repeat
PPTA	PF01239	159 - 189	5e-09	Protein prenyltransferase alpha subunit repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007155)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24490 AT4G24490 AT5G41820 AT5G41820
fragaria_vesca	FvH4_5g35190 FvH4_5g35190 FvH4_5g35190 FvH4_5g35190
malus_domestica	MD08G1200000.v1.1 MD15G1387100.v1.1
prunus_persica	Prupe.1G533400_v2.0.a1 Prupe.1G572600_v2.0.a1
pyrus_communis	pycom08g17340 pycom15g34720
rosa_chinensis	RchiOBHm_Chr7g0236311
rosa_laevigata	RLG00000001088
rosa_multiflora	Rmu_sc0005716.1_g000009 Rmu_sc0006268.1_g000006
rosa_roxburghii	Rroxscaffold_3G00225260
rosa_rugosa	Rorug07G0295400
rosa_samantha	Rh7AG450600 Rh7BG422100 Rh7CG470300 Rh7DG439600
rosa_wichuraiana	Rw7G037450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	144
AccI	GTMKAC	1 cut(s)	491
AccII	CGCG	2 cut(s)	375, 1196
AccIII	TCCGGA	2 cut(s)	655, 994
AciI	CCGC	7 cut(s)	45, 51, 54, 144, 180, 373, 1525
AclWI	GGATC	6 cut(s)	233, 404, 417, 647, 660, 1562
AcoI	YGGCCR	1 cut(s)	740
AcsI	RAATTY	4 cut(s)	304, 418, 989, 1186
AcuI	CTGAAG	1 cut(s)	999
AfaI	GTAC	4 cut(s)	633, 840, 1199, 1414
AfeI	AGCGCT	1 cut(s)	69
AfiI	CCNNNNNNNGG	6 cut(s)	112, 749, 972, 973, 1330, 1528
AflIII	ACRYGT	1 cut(s)	1194
AgsI	TTSAA	8 cut(s)	463, 859, 872, 902, 1111, 1133, 1281, 1448
AhdI	GACNNNNNGTC	1 cut(s)	1056
AjnI	CCWGG	2 cut(s)	533, 737
AleI	CACNNNNGTG	1 cut(s)	786
AluBI	AGCT	9 cut(s)	323, 385, 406, 866, 1022, 1030, 1219, 1363, 1388
AluI	AGCT	9 cut(s)	323, 385, 406, 866, 1022, 1030, 1219, 1363, 1388
Alw21I	GWGCWC	4 cut(s)	230, 295, 555, 1509
Alw26I	GTCTC	4 cut(s)	292, 807, 1064, 1410
AlwI	GGATC	6 cut(s)	233, 404, 417, 647, 660, 1562
AlwNI	CAGNNNCTG	1 cut(s)	406
Ama87I	CYCGRG	2 cut(s)	155, 167
Aor13HI	TCCGGA	2 cut(s)	655, 994
Aor51HI	AGCGCT	1 cut(s)	69
AoxI	GGCC	3 cut(s)	740, 744, 1005
ApeKI	GCWGC	2 cut(s)	403, 452
ApoI	RAATTY	4 cut(s)	304, 418, 989, 1186
ArsI	GACNNNNNNTTYG	2 cut(s)	995, 1027
AseI	ATTAAT	1 cut(s)	1254
Asp700I	GAANNNNTTC	2 cut(s)	1188, 1443
AspLEI	GCGC	1 cut(s)	70
AspS9I	GGNCC	4 cut(s)	745, 1006, 1426, 1474
AsuC2I	CCSGG	2 cut(s)	74, 415
AsuHPI	GGTGA	2 cut(s)	95, 1598
AvaI	CYCGRG	2 cut(s)	155, 167
AvaII	GGWCC	2 cut(s)	1426, 1474
BamHI	GGATCC	2 cut(s)	409, 652
BanII	GRGCYC	1 cut(s)	79
BbsI	GAAGAC	2 cut(s)	42, 1005
Bbv12I	GWGCWC	4 cut(s)	230, 295, 555, 1509
BbvI	GCAGC	2 cut(s)	415, 439
BccI	CCATC	4 cut(s)	266, 966, 1098, 1486
BceAI	ACGGC	1 cut(s)	1290
BcgI	CGANNNNNNTGC	2 cut(s)	136, 170
BciT130I	CCWGG	2 cut(s)	535, 739
BclI	TGATCA	2 cut(s)	661, 697
BcnI	CCSGG	2 cut(s)	74, 415
BcoDI	GTCTC	4 cut(s)	292, 807, 1064, 1410
BfaI	CTAG	3 cut(s)	495, 1370, 1514
BfoI	RGCGCY	1 cut(s)	71
BglII	AGATCT	1 cut(s)	922
BisI	GCNGC	5 cut(s)	45, 54, 145, 404, 453
BlpI	GCTNAGC	1 cut(s)	347
BlsI	GCNGC	5 cut(s)	46, 55, 146, 405, 454
Bme1390I	CCNGG	4 cut(s)	74, 415, 535, 739
Bme18I	GGWCC	2 cut(s)	1426, 1474
BmeRI	GACNNNNNGTC	1 cut(s)	1056
BmeT110I	CYCGRG	2 cut(s)	155, 167
BmgT120I	GGNCC	4 cut(s)	745, 1006, 1426, 1474
BmiI	GGNNCC	3 cut(s)	411, 654, 1476
BmrFI	CCNGG	4 cut(s)	74, 415, 535, 739
BmrI	ACTGGG	2 cut(s)	1003, 1093
BmsI	GCATC	5 cut(s)	337, 628, 706, 988, 1579
BmuI	ACTGGG	2 cut(s)	1003, 1093
BpiI	GAAGAC	2 cut(s)	42, 1005
BpmI	CTGGAG	1 cut(s)	65
Bpu1102I	GCTNAGC	1 cut(s)	347
BpuEI	CTTGAG	3 cut(s)	236, 374, 567
BpuMI	CCSGG	2 cut(s)	74, 415
BsaI	GGTCTC	1 cut(s)	1064
BsaJI	CCNNGG	3 cut(s)	14, 413, 748
BsaWI	WCCGGW	3 cut(s)	438, 655, 994
BsaXI	ACNNNNNCTCC	6 cut(s)	80, 110, 703, 733, 1528, 1558
Bsc4I	CCNNNNNNNGG	6 cut(s)	112, 749, 972, 973, 1330, 1528
Bse118I	RCCGGY	1 cut(s)	742
Bse1I	ACTGG	5 cut(s)	82, 888, 938, 1009, 1099
BseAI	TCCGGA	2 cut(s)	655, 994
BseBI	CCWGG	2 cut(s)	535, 739
BseDI	CCNNGG	3 cut(s)	14, 413, 748
BseGI	GGATG	4 cut(s)	664, 884, 1003, 1090
BseLI	CCNNNNNNNGG	6 cut(s)	112, 749, 972, 973, 1330, 1528
BseMII	CTCAG	5 cut(s)	287, 543, 1067, 1226, 1502
BseNI	ACTGG	5 cut(s)	82, 888, 938, 1009, 1099
BseRI	GAGGAG	2 cut(s)	143, 711
BseXI	GCAGC	2 cut(s)	415, 439
BsgI	GTGCAG	1 cut(s)	1311
Bsh1236I	CGCG	2 cut(s)	375, 1196
Bsh1285I	CGRYCG	3 cut(s)	223, 268, 470
BshFI	GGCC	3 cut(s)	742, 746, 1007
BsiEI	CGRYCG	3 cut(s)	223, 268, 470
BsiHKAI	GWGCWC	4 cut(s)	230, 295, 555, 1509
BsiHKCI	CYCGRG	2 cut(s)	155, 167
BsiSI	CCGG	7 cut(s)	32, 73, 415, 439, 656, 743, 995
BslI	CCNNNNNNNGG	6 cut(s)	112, 749, 972, 973, 1330, 1528
BsmAI	GTCTC	4 cut(s)	292, 807, 1064, 1410
BsmBI	CGTCTC	1 cut(s)	807
BsmI	GAATGC	1 cut(s)	1106
BsnI	GGCC	3 cut(s)	742, 746, 1007
Bso31I	GGTCTC	1 cut(s)	1064
BsoBI	CYCGRG	2 cut(s)	155, 167
Bsp1286I	GDGCHC	5 cut(s)	79, 230, 295, 555, 1509
Bsp13I	TCCGGA	2 cut(s)	655, 994
Bsp1407I	TGTACA	2 cut(s)	631, 1412
Bsp143I	GATC	9 cut(s)	220, 238, 409, 467, 652, 661, 697, 922, 1567
Bsp1720I	GCTNAGC	1 cut(s)	347
Bsp19I	CCATGG	1 cut(s)	748
BspACI	CCGC	7 cut(s)	45, 51, 54, 144, 180, 373, 1525
BspANI	GGCC	3 cut(s)	742, 746, 1007
BspCNI	CTCAG	5 cut(s)	288, 542, 1066, 1225, 1501
BspEI	TCCGGA	2 cut(s)	655, 994
BspFNI	CGCG	2 cut(s)	375, 1196
BspHI	TCATGA	1 cut(s)	1390
BspLI	GGNNCC	3 cut(s)	411, 654, 1476
BspPI	GGATC	6 cut(s)	233, 404, 417, 647, 660, 1562
BspTNI	GGTCTC	1 cut(s)	1064
BsrBI	CCGCTC	1 cut(s)	144
BsrFI	RCCGGY	1 cut(s)	742
BsrGI	TGTACA	2 cut(s)	631, 1412
BsrI	ACTGG	5 cut(s)	82, 888, 938, 1009, 1099
BssAI	RCCGGY	1 cut(s)	742
BssECI	CCNNGG	3 cut(s)	14, 413, 748
BssMI	GATC	9 cut(s)	220, 238, 409, 467, 652, 661, 697, 922, 1567
BssNAI	GTATAC	1 cut(s)	492
BssT1I	CCWWGG	1 cut(s)	748
Bst1107I	GTATAC	1 cut(s)	492
Bst2UI	CCWGG	2 cut(s)	535, 739
Bst4CI	ACNGT	3 cut(s)	138, 838, 1631
Bst6I	CTCTTC	4 cut(s)	474, 729, 1325, 1546
BstAUI	TGTACA	2 cut(s)	631, 1412
BstC8I	GCNNGC	3 cut(s)	744, 783, 1290
BstDEI	CTNAG	7 cut(s)	296, 347, 529, 1053, 1212, 1247, 1488
BstDSI	CCRYGG	1 cut(s)	748
BstENI	CCTNNNNNAGG	1 cut(s)	1526
BstF5I	GGATG	4 cut(s)	664, 884, 1003, 1090
BstFNI	CGCG	2 cut(s)	375, 1196
BstH2I	RGCGCY	1 cut(s)	71
BstHHI	GCGC	1 cut(s)	70
BstKTI	GATC	9 cut(s)	223, 241, 412, 470, 655, 664, 700, 925, 1570
BstMAI	GTCTC	4 cut(s)	292, 807, 1064, 1410
BstMBI	GATC	9 cut(s)	220, 238, 409, 467, 652, 661, 697, 922, 1567
BstMCI	CGRYCG	3 cut(s)	223, 268, 470
BstMWI	GCNNNNNNNGC	6 cut(s)	50, 53, 59, 74, 391, 400
BstNI	CCWGG	2 cut(s)	535, 739
BstNSI	RCATGY	2 cut(s)	632, 1602
BstSCI	CCNGG	4 cut(s)	72, 413, 533, 737
BstUI	CGCG	2 cut(s)	375, 1196
BstV1I	GCAGC	2 cut(s)	415, 439
BstV2I	GAAGAC	2 cut(s)	42, 1005
BstX2I	RGATCY	3 cut(s)	409, 652, 922
BstYI	RGATCY	3 cut(s)	409, 652, 922
BstZ17I	GTATAC	1 cut(s)	492
BsuRI	GGCC	3 cut(s)	742, 746, 1007
BtgI	CCRYGG	1 cut(s)	748
BtsCI	GGATG	4 cut(s)	664, 884, 1003, 1090
BtsIMutI	CAGTG	2 cut(s)	842, 1642
Cac8I	GCNNGC	3 cut(s)	744, 783, 1290
CaiI	CAGNNNCTG	1 cut(s)	406
CciI	TCATGA	1 cut(s)	1390
CfoI	GCGC	1 cut(s)	70
Cfr10I	RCCGGY	1 cut(s)	742
Cfr13I	GGNCC	4 cut(s)	745, 1006, 1426, 1474
Csp6I	GTAC	4 cut(s)	632, 839, 1198, 1413
CviAII	CATG	7 cut(s)	425, 629, 749, 1223, 1265, 1391, 1599
CviQI	GTAC	4 cut(s)	632, 839, 1198, 1413
DdeI	CTNAG	7 cut(s)	296, 347, 529, 1053, 1212, 1247, 1488
DpnI	GATC	9 cut(s)	222, 240, 411, 469, 654, 663, 699, 924, 1569
DpnII	GATC	9 cut(s)	220, 238, 409, 467, 652, 661, 697, 922, 1567
DriI	GACNNNNNGTC	1 cut(s)	1056
EaeI	YGGCCR	1 cut(s)	740
Eam1104I	CTCTTC	4 cut(s)	474, 729, 1325, 1546
Eam1105I	GACNNNNNGTC	1 cut(s)	1056
EarI	CTCTTC	4 cut(s)	474, 729, 1325, 1546
EciI	GGCGGA	1 cut(s)	40
Eco130I	CCWWGG	1 cut(s)	748
Eco24I	GRGCYC	1 cut(s)	79
Eco31I	GGTCTC	1 cut(s)	1064
Eco47I	GGWCC	2 cut(s)	1426, 1474
Eco47III	AGCGCT	1 cut(s)	69
Eco57I	CTGAAG	1 cut(s)	999
Eco88I	CYCGRG	2 cut(s)	155, 167
EcoNI	CCTNNNNNAGG	1 cut(s)	1526
EcoRII	CCWGG	2 cut(s)	533, 737
EcoT14I	CCWWGG	1 cut(s)	748
EcoT38I	GRGCYC	1 cut(s)	79
ErhI	CCWWGG	1 cut(s)	748
Esp3I	CGTCTC	1 cut(s)	807
FaeI	CATG	7 cut(s)	428, 632, 752, 1226, 1268, 1394, 1602
FatI	CATG	7 cut(s)	424, 628, 748, 1222, 1264, 1390, 1598
FbaI	TGATCA	2 cut(s)	661, 697
FblI	GTMKAC	1 cut(s)	491
Fnu4HI	GCNGC	5 cut(s)	45, 54, 145, 404, 453
FokI	GGATG	4 cut(s)	671, 871, 1010, 1077
FriOI	GRGCYC	1 cut(s)	79
FseI	GGCCGGCC	1 cut(s)	746
Fsp4HI	GCNGC	5 cut(s)	45, 54, 145, 404, 453
FspBI	CTAG	3 cut(s)	495, 1370, 1514
GlaI	GCGC	1 cut(s)	69
GluI	GCNGC	5 cut(s)	45, 54, 145, 404, 453
GsuI	CTGGAG	1 cut(s)	65
HaeII	RGCGCY	1 cut(s)	71
HaeIII	GGCC	3 cut(s)	742, 746, 1007
HapII	CCGG	7 cut(s)	32, 73, 415, 439, 656, 743, 995
HhaI	GCGC	1 cut(s)	70
Hin1II	CATG	7 cut(s)	428, 632, 752, 1226, 1268, 1394, 1602
Hin6I	GCGC	1 cut(s)	68
HinP1I	GCGC	1 cut(s)	68
HincII	GTYRAC	1 cut(s)	1244
HindII	GTYRAC	1 cut(s)	1244
HindIII	AAGCTT	3 cut(s)	383, 1020, 1361
HinfI	GANTC	5 cut(s)	233, 245, 827, 902, 1051
HpaII	CCGG	7 cut(s)	32, 73, 415, 439, 656, 743, 995
HphI	GGTGA	2 cut(s)	95, 1598
Hpy166II	GTNNAC	7 cut(s)	118, 492, 634, 880, 1244, 1413, 1429
Hpy188III	TCNNGA	9 cut(s)	242, 656, 695, 771, 831, 995, 1214, 1391, 1608
Hpy8I	GTNNAC	7 cut(s)	118, 492, 634, 880, 1244, 1413, 1429
Hpy99I	CGWCG	2 cut(s)	128, 206
HpyAV	CCTTC	3 cut(s)	598, 866, 1522
HpyCH4III	ACNGT	3 cut(s)	138, 838, 1631
HpyCH4V	TGCA	7 cut(s)	4, 455, 1001, 1070, 1106, 1292, 1598
HpyF10VI	GCNNNNNNNGC	6 cut(s)	50, 53, 59, 74, 391, 400
HpyF3I	CTNAG	7 cut(s)	296, 347, 529, 1053, 1212, 1247, 1488
Hsp92II	CATG	7 cut(s)	428, 632, 752, 1226, 1268, 1394, 1602
HspAI	GCGC	1 cut(s)	68
Kpn2I	TCCGGA	2 cut(s)	655, 994
KroI	GCCGGC	1 cut(s)	742
KroNI	GCCGGC	1 cut(s)	744
Ksp22I	TGATCA	2 cut(s)	661, 697
Kzo9I	GATC	9 cut(s)	220, 238, 409, 467, 652, 661, 697, 922, 1567
LmnI	GCTCC	6 cut(s)	75, 233, 320, 558, 724, 1216
Lsp1109I	GCAGC	2 cut(s)	415, 439
LweI	GCATC	5 cut(s)	337, 628, 706, 988, 1579
MaeI	CTAG	3 cut(s)	495, 1370, 1514
MaeIII	GTNAC	3 cut(s)	788, 976, 1625
MalI	GATC	9 cut(s)	222, 240, 411, 469, 654, 663, 699, 924, 1569
MbiI	CCGCTC	1 cut(s)	144
MboI	GATC	9 cut(s)	220, 238, 409, 467, 652, 661, 697, 922, 1567
MflI	RGATCY	3 cut(s)	409, 652, 922
MhlI	GDGCHC	5 cut(s)	79, 230, 295, 555, 1509
MluI	ACGCGT	1 cut(s)	1194
MlyI	GAGTC	3 cut(s)	239, 242, 1045
MmeI	TCCRAC	2 cut(s)	465, 1452
MroI	TCCGGA	2 cut(s)	655, 994
MroNI	GCCGGC	1 cut(s)	742
MroXI	GAANNNNTTC	2 cut(s)	1188, 1443
MseI	TTAA	5 cut(s)	309, 987, 1254, 1382, 1463
MslI	CAYNNNNRTG	2 cut(s)	786, 1434
MspA1I	CMGCKG	2 cut(s)	406, 1030
MspI	CCGG	7 cut(s)	32, 73, 415, 439, 656, 743, 995
MspR9I	CCNGG	4 cut(s)	74, 415, 535, 739
Mva1269I	GAATGC	1 cut(s)	1106
MvaI	CCWGG	2 cut(s)	535, 739
MvnI	CGCG	2 cut(s)	375, 1196
MwoI	GCNNNNNNNGC	6 cut(s)	50, 53, 59, 74, 391, 400
NaeI	GCCGGC	1 cut(s)	744
NciI	CCSGG	2 cut(s)	74, 415
NcoI	CCATGG	1 cut(s)	748
NdeII	GATC	9 cut(s)	220, 238, 409, 467, 652, 661, 697, 922, 1567
NgoMIV	GCCGGC	1 cut(s)	742
NlaIII	CATG	7 cut(s)	428, 632, 752, 1226, 1268, 1394, 1602
NlaIV	GGNNCC	3 cut(s)	411, 654, 1476
NmuCI	GTSAC	2 cut(s)	788, 1625
NspI	RCATGY	2 cut(s)	632, 1602
OliI	CACNNNNGTG	1 cut(s)	786
PaeR7I	CTCGAG	1 cut(s)	155
PagI	TCATGA	1 cut(s)	1390
PctI	GAATGC	1 cut(s)	1106
PdiI	GCCGGC	1 cut(s)	744
PdmI	GAANNNNTTC	2 cut(s)	1188, 1443
PfeI	GAWTC	2 cut(s)	827, 902
PkrI	GCNGC	5 cut(s)	46, 55, 146, 405, 454
Ple19I	CGATCG	2 cut(s)	223, 470
PleI	GAGTC	3 cut(s)	239, 241, 1045
PpsI	GAGTC	3 cut(s)	239, 241, 1045
PshBI	ATTAAT	1 cut(s)	1254
Psp6I	CCWGG	2 cut(s)	533, 737
PspGI	CCWGG	2 cut(s)	533, 737
PspN4I	GGNNCC	3 cut(s)	411, 654, 1476
PspPI	GGNCC	4 cut(s)	745, 1006, 1426, 1474
PspXI	VCTCGAGB	1 cut(s)	155
PstNI	CAGNNNCTG	1 cut(s)	406
PsuI	RGATCY	3 cut(s)	409, 652, 922
PvuI	CGATCG	2 cut(s)	223, 470
PvuII	CAGCTG	2 cut(s)	406, 1030
RigI	GGCCGGCC	1 cut(s)	746
RsaI	GTAC	4 cut(s)	633, 840, 1199, 1414
RsaNI	GTAC	4 cut(s)	632, 839, 1198, 1413
RseI	CAYNNNNRTG	2 cut(s)	786, 1434
SaqAI	TTAA	5 cut(s)	309, 987, 1254, 1382, 1463
SatI	GCNGC	5 cut(s)	45, 54, 145, 404, 453
Sau3AI	GATC	9 cut(s)	220, 238, 409, 467, 652, 661, 697, 922, 1567
Sau96I	GGNCC	4 cut(s)	745, 1006, 1426, 1474
SchI	GAGTC	3 cut(s)	239, 242, 1045
ScrFI	CCNGG	4 cut(s)	74, 415, 535, 739
SduI	GDGCHC	5 cut(s)	79, 230, 295, 555, 1509
SfaNI	GCATC	5 cut(s)	337, 628, 706, 988, 1579
Sfr274I	CTCGAG	1 cut(s)	155
SinI	GGWCC	2 cut(s)	1426, 1474
SlaI	CTCGAG	1 cut(s)	155
SmiMI	CAYNNNNRTG	2 cut(s)	786, 1434
SmlI	CTYRAG	4 cut(s)	155, 251, 389, 582
SmoI	CTYRAG	4 cut(s)	155, 251, 389, 582
SsiI	CCGC	7 cut(s)	45, 51, 54, 144, 180, 373, 1525
SspMI	CTAG	3 cut(s)	495, 1370, 1514
StyD4I	CCNGG	4 cut(s)	72, 413, 533, 737
StyI	CCWWGG	1 cut(s)	748
TaaI	ACNGT	3 cut(s)	138, 838, 1631
TaqI	TCGA	5 cut(s)	156, 219, 264, 334, 770
TaqII	GACCGA	1 cut(s)	282
TatI	WGTACW	2 cut(s)	631, 1412
TauI	GCSGC	3 cut(s)	47, 56, 147
TfiI	GAWTC	2 cut(s)	827, 902
Tru1I	TTAA	5 cut(s)	309, 987, 1254, 1382, 1463
Tru9I	TTAA	5 cut(s)	309, 987, 1254, 1382, 1463
TscAI	CASTG	2 cut(s)	849, 1642
TseFI	GTSAC	2 cut(s)	788, 1625
TseI	GCWGC	2 cut(s)	403, 452
Tsp45I	GTSAC	2 cut(s)	788, 1625
TspDTI	ATGAA	9 cut(s)	395, 413, 584, 722, 897, 1070, 1197, 1323, 1452
TspGWI	ACGGA	4 cut(s)	21, 333, 665, 1398
TspRI	CASTG	2 cut(s)	849, 1642
VpaK11BI	GGWCC	2 cut(s)	1426, 1474
VspI	ATTAAT	1 cut(s)	1254
XagI	CCTNNNNNAGG	1 cut(s)	1526
XapI	RAATTY	4 cut(s)	304, 418, 989, 1186
XceI	RCATGY	2 cut(s)	632, 1602
XhoI	CTCGAG	1 cut(s)	155
XmiI	GTMKAC	1 cut(s)	491
XmnI	GAANNNNTTC	2 cut(s)	1188, 1443
XspI	CTAG	3 cut(s)	495, 1370, 1514

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.