Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006524

Physical Location & Seq

Genomic Coordinates Reverse (-)

13259969 .. 13262110

Gene Structure 2142 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G26180.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 996 bp

ATGGCGGAGGGTGAAGAGAAGAACGGAATTATTGATTCGATTCCTTTATTCGCTAAGGAGCTTATTGCCGGCGGCGTCACGGGTGGTATAGCTAAAACCGCCGTTGCTCCACTCGAGCGAATTAAGATTCTTTTCCAGACCAGAAGGGATGAGTTTAAAAGGATAGGACTTGTTGGATCAATCAACAAGATTGGCAAAACTGAAGGTTTGATGGGTTTCTACAGAGGGAATGGTGCAAGTGTTGCTCGGATAGTTCCCTATGCAGCTCTTCATTACATGGCTTATGAGGAATACAGGAGATGGATTATCTTTGGTTTCCCAGACACTACTCGAGGCCCATTGCTTGATCTCGTAGCTGGATCATTTGCTGGTGGTACTGCGGTTCTCTTCACCTATCCTCTTGACCTGGTCCGGACTAAGCTCGCTTATCAGGTTGTTGGTTCAGCAAAGACGCAAGTAAAAGCTATTCCCGTGGAACAAATCATATACAGAGGAATTGTAGATTGTTTCTCGAGGACATACAGAGAATCTGGAGCCCGAGGCCTATATCGTGGTGTAGCTCCTTCTCTCTATGGGATCTTCCCTTATGCTGGTTTGAAGTTCTACTTCTACGAGGAGATGAAACGTCATGTCCCTCCGGAACATAAGCAAGACATTTCCCTGAAACTCGTTTGTGGGTCAGTCGCTGGATTGCTTGGTCAGACTTTAACATACCCTCTCGATGTTGTCCGGAGACAAATGCAGGTTGAGAGACTATATTCAGCCGTTAAGGAAGAAACAAGAAGAGGAACAATGCAAACCCTTTTCAAGATTGCAAGAGAAGAAGGTTGGAAGCAACTCTTCTCAGGGCTTAGCATCAATTACCTTAAGGTTGTACCGTCTGTGGCAATCGGATTCACAGTGTATGATATTATGAAGCTGCACTTAAGAGTCCCGCCTCGAGAGGAACCTGAGGCAGAAGCTGTGACGACACGAAAAAGGAAAGTTTTCACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000295 GO:0003674 GO:0005215 GO:0005346 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006732 GO:0006810 GO:0006811 GO:0006820 GO:0006839 GO:0006862 GO:0008150 GO:0008152 GO:0008509 GO:0008514 GO:0009058 GO:0009108 GO:0009987 GO:0015075 GO:0015215 GO:0015216 GO:0015228 GO:0015291 GO:0015297 GO:0015605 GO:0015711 GO:0015748 GO:0015865 GO:0015868 GO:0015880 GO:0015931 GO:0015932 GO:0016020 GO:0016021 GO:0019866 GO:0022804 GO:0022857 GO:0031090 GO:0031224 GO:0031966 GO:0031967 GO:0031975 GO:0034220 GO:0035349 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051181 GO:0051182 GO:0051184 GO:0051185 GO:0051186 GO:0051188 GO:0051234 GO:0051503 GO:0055085 GO:0071077 GO:0071106 GO:0071702 GO:0071705 GO:0072530 GO:0098656 GO:1901264 GO:1901505 GO:1901679 GO:1990542 GO:1990559

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mito_carr

Protein Analysis

331

Amino Acids

37.09

Weight (kDa)

9.66

Isoelectric Point (pI)

38.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Mito_carr	PF00153	17 - 103	3.8e-21	Mitochondrial carrier protein
Mito_carr	PF00153	113 - 211	9.5e-25	Mitochondrial carrier protein
Mito_carr	PF00153	220 - 290	5.6e-15	Mitochondrial carrier protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006524)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26180 AT4G26180
fragaria_vesca	FvH4_1g07110 FvH4_1g07110 FvH4_1g07110 FvH4_1g07110 FvH4_1g07110 FvH4_1g07110 FvH4_1g07110
malus_domestica	MD15G1204300.v1.1
prunus_persica	Prupe.7G212900_v2.0.a1 Prupe.7G212900_v2.0.a1 Prupe.7G212900_v2.0.a1 Prupe.7G212900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0093001
rosa_laevigata	RLG00000016358
rosa_multiflora	Rmu_sc0000965.1_g000022
rosa_roxburghii	Rroxscaffold_2G00148630
rosa_rugosa	Rorug02G0031300 Rorug02G0031400 Rorug02G0031500
rosa_samantha	Rh2AG077100 Rh2BG078500 Rh2CG080700 Rh2DG075800
rosa_wichuraiana	Rw2G006910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	733
AccIII	TCCGGA	3 cut(s)	411, 637, 729
AciI	CCGC	5 cut(s)	5, 72, 99, 380, 935
AclWI	GGATC	3 cut(s)	184, 367, 584
AcuI	CTGAAG	1 cut(s)	222
AcyI	GRCGYC	1 cut(s)	75
AfaI	GTAC	2 cut(s)	376, 876
AfiI	CCNNNNNNNGG	1 cut(s)	590
AflII	CTTAAG	2 cut(s)	866, 925
AgsI	TTSAA	2 cut(s)	598, 808
AjnI	CCWGG	1 cut(s)	405
AluBI	AGCT	9 cut(s)	61, 92, 266, 356, 421, 464, 560, 919, 962
AluI	AGCT	9 cut(s)	61, 92, 266, 356, 421, 464, 560, 919, 962
Alw26I	GTCTC	2 cut(s)	727, 745
AlwI	GGATC	3 cut(s)	184, 367, 584
AlwNI	CAGNNNCTG	2 cut(s)	686, 962
Ama87I	CYCGRG	5 cut(s)	113, 330, 511, 537, 939
Aor13HI	TCCGGA	3 cut(s)	411, 637, 729
AoxI	GGCC	2 cut(s)	334, 541
ApeKI	GCWGC	2 cut(s)	263, 919
Asp700I	GAANNNNTTC	1 cut(s)	986
AspS9I	GGNCC	2 cut(s)	335, 409
AsuHPI	GGTGA	3 cut(s)	23, 382, 982
AvaI	CYCGRG	5 cut(s)	113, 330, 511, 537, 939
AvaII	GGWCC	1 cut(s)	409
AxyI	CCTNAGG	1 cut(s)	951
BaeI	ACNNNNGTAYC	2 cut(s)	366, 399
BanII	GRGCYC	1 cut(s)	538
BbvI	GCAGC	2 cut(s)	275, 906
BccI	CCATC	2 cut(s)	205, 294
BceAI	ACGGC	2 cut(s)	86, 749
BciT130I	CCWGG	1 cut(s)	407
BcoDI	GTCTC	2 cut(s)	727, 745
BfmI	CTRYAG	1 cut(s)	220
BfrI	CTTAAG	2 cut(s)	866, 925
BfuAI	ACCTGC	1 cut(s)	733
BisI	GCNGC	3 cut(s)	73, 264, 920
BlpI	GCTNAGC	1 cut(s)	851
BlsI	GCNGC	3 cut(s)	74, 265, 921
Bme1390I	CCNGG	1 cut(s)	407
Bme18I	GGWCC	1 cut(s)	409
BmeT110I	CYCGRG	5 cut(s)	113, 330, 511, 537, 939
BmgT120I	GGNCC	2 cut(s)	335, 409
BmiI	GGNNCC	2 cut(s)	535, 948
BmrFI	CCNGG	1 cut(s)	407
BmsI	GCATC	1 cut(s)	864
BpmI	CTGGAG	1 cut(s)	552
Bpu10I	CCTNAGC	1 cut(s)	54
Bpu1102I	GCTNAGC	1 cut(s)	851
BsaHI	GRCGYC	1 cut(s)	75
BsaJI	CCNNGG	2 cut(s)	471, 538
BsaWI	WCCGGW	3 cut(s)	411, 637, 729
Bsc4I	CCNNNNNNNGG	1 cut(s)	590
Bse118I	RCCGGY	1 cut(s)	68
Bse21I	CCTNAGG	1 cut(s)	951
Bse3DI	GCAATG	1 cut(s)	338
BseAI	TCCGGA	3 cut(s)	411, 637, 729
BseBI	CCWGG	1 cut(s)	407
BseDI	CCNNGG	2 cut(s)	471, 538
BseGI	GGATG	1 cut(s)	154
BseLI	CCNNNNNNNGG	1 cut(s)	590
BseMI	GCAATG	1 cut(s)	338
BseMII	CTCAG	2 cut(s)	858, 942
BseRI	GAGGAG	1 cut(s)	629
BseXI	GCAGC	2 cut(s)	275, 906
BsgI	GTGCAG	1 cut(s)	905
BshFI	GGCC	2 cut(s)	336, 543
BsiHKCI	CYCGRG	5 cut(s)	113, 330, 511, 537, 939
BsiSI	CCGG	4 cut(s)	69, 412, 638, 730
BslFI	GGGAC	2 cut(s)	617, 917
BslI	CCNNNNNNNGG	1 cut(s)	590
BsmAI	GTCTC	2 cut(s)	727, 745
BsmFI	GGGAC	2 cut(s)	617, 917
BsnI	GGCC	2 cut(s)	336, 543
BsoBI	CYCGRG	5 cut(s)	113, 330, 511, 537, 939
Bsp1286I	GDGCHC	1 cut(s)	538
Bsp13I	TCCGGA	3 cut(s)	411, 637, 729
Bsp143I	GATC	4 cut(s)	176, 346, 359, 576
Bsp1720I	GCTNAGC	1 cut(s)	851
BspACI	CCGC	5 cut(s)	5, 72, 99, 380, 935
BspANI	GGCC	2 cut(s)	336, 543
BspCNI	CTCAG	2 cut(s)	857, 943
BspEI	TCCGGA	3 cut(s)	411, 637, 729
BspLI	GGNNCC	2 cut(s)	535, 948
BspMI	ACCTGC	1 cut(s)	733
BspPI	GGATC	3 cut(s)	184, 367, 584
BspQI	GCTCTTC	1 cut(s)	273
BspTI	CTTAAG	2 cut(s)	866, 925
BsrDI	GCAATG	1 cut(s)	338
BsrFI	RCCGGY	1 cut(s)	68
BssAI	RCCGGY	1 cut(s)	68
BssECI	CCNNGG	2 cut(s)	471, 538
BssMI	GATC	4 cut(s)	176, 346, 359, 576
BssNI	GRCGYC	1 cut(s)	75
Bst2UI	CCWGG	1 cut(s)	407
Bst4CI	ACNGT	2 cut(s)	879, 901
Bst6I	CTCTTC	5 cut(s)	9, 273, 392, 778, 845
BstACI	GRCGYC	1 cut(s)	75
BstAFI	CTTAAG	2 cut(s)	866, 925
BstAPI	GCANNNNNTGC	1 cut(s)	242
BstC8I	GCNNGC	2 cut(s)	70, 423
BstDEI	CTNAG	5 cut(s)	54, 417, 844, 851, 951
BstDSI	CCRYGG	1 cut(s)	471
BstF5I	GGATG	1 cut(s)	154
BstKTI	GATC	4 cut(s)	179, 349, 362, 579
BstMAI	GTCTC	2 cut(s)	727, 745
BstMBI	GATC	4 cut(s)	176, 346, 359, 576
BstMWI	GCNNNNNNNGC	2 cut(s)	98, 242
BstNI	CCWGG	1 cut(s)	407
BstSCI	CCNGG	1 cut(s)	405
BstSFI	CTRYAG	1 cut(s)	220
BstV1I	GCAGC	2 cut(s)	275, 906
BstX2I	RGATCY	1 cut(s)	576
BstYI	RGATCY	1 cut(s)	576
Bsu36I	CCTNAGG	1 cut(s)	951
BsuRI	GGCC	2 cut(s)	336, 543
BtgI	CCRYGG	1 cut(s)	471
BtsCI	GGATG	1 cut(s)	154
BtsIMutI	CAGTG	1 cut(s)	906
BveI	ACCTGC	1 cut(s)	733
Cac8I	GCNNGC	2 cut(s)	70, 423
CaiI	CAGNNNCTG	2 cut(s)	686, 962
Cfr10I	RCCGGY	1 cut(s)	68
Cfr13I	GGNCC	2 cut(s)	335, 409
CseI	GACGC	2 cut(s)	64, 460
CsiI	ACCWGGT	1 cut(s)	405
Csp6I	GTAC	2 cut(s)	375, 875
CviAII	CATG	2 cut(s)	277, 629
CviQI	GTAC	2 cut(s)	375, 875
DdeI	CTNAG	5 cut(s)	54, 417, 844, 851, 951
DpnI	GATC	4 cut(s)	178, 348, 361, 578
DpnII	GATC	4 cut(s)	176, 346, 359, 576
DraI	TTTAAA	1 cut(s)	157
Eam1104I	CTCTTC	5 cut(s)	9, 273, 392, 778, 845
EarI	CTCTTC	5 cut(s)	9, 273, 392, 778, 845
EciI	GGCGGA	1 cut(s)	20
Eco147I	AGGCCT	1 cut(s)	543
Eco24I	GRGCYC	1 cut(s)	538
Eco47I	GGWCC	1 cut(s)	409
Eco57I	CTGAAG	1 cut(s)	222
Eco81I	CCTNAGG	1 cut(s)	951
Eco88I	CYCGRG	5 cut(s)	113, 330, 511, 537, 939
EcoRII	CCWGG	1 cut(s)	405
EcoT38I	GRGCYC	1 cut(s)	538
FaeI	CATG	2 cut(s)	280, 632
FalI	AAGNNNNNCTT	6 cut(s)	590, 622, 824, 856, 908, 940
FaqI	GGGAC	2 cut(s)	617, 917
FatI	CATG	2 cut(s)	276, 628
FauI	CCCGC	1 cut(s)	942
Fnu4HI	GCNGC	3 cut(s)	73, 264, 920
FokI	GGATG	1 cut(s)	161
FriOI	GRGCYC	1 cut(s)	538
Fsp4HI	GCNGC	3 cut(s)	73, 264, 920
GluI	GCNGC	3 cut(s)	73, 264, 920
GsuI	CTGGAG	1 cut(s)	552
HaeIII	GGCC	2 cut(s)	336, 543
HapII	CCGG	4 cut(s)	69, 412, 638, 730
HgaI	GACGC	2 cut(s)	64, 460
Hin1I	GRCGYC	1 cut(s)	75
Hin1II	CATG	2 cut(s)	280, 632
HinfI	GANTC	6 cut(s)	35, 40, 127, 527, 894, 930
HpaII	CCGG	4 cut(s)	69, 412, 638, 730
HphI	GGTGA	3 cut(s)	23, 382, 982
Hpy188I	TCNGA	3 cut(s)	249, 702, 893
HpyAV	CCTTC	4 cut(s)	138, 197, 573, 818
HpyCH4III	ACNGT	2 cut(s)	879, 901
HpyCH4IV	ACGT	1 cut(s)	625
HpyCH4V	TGCA	6 cut(s)	236, 263, 742, 796, 815, 922
HpyF10VI	GCNNNNNNNGC	2 cut(s)	98, 242
HpyF3I	CTNAG	5 cut(s)	54, 417, 844, 851, 951
HpySE526I	ACGT	1 cut(s)	625
Hsp92I	GRCGYC	1 cut(s)	75
Hsp92II	CATG	2 cut(s)	280, 632
Kpn2I	TCCGGA	3 cut(s)	411, 637, 729
KroI	GCCGGC	1 cut(s)	68
KroNI	GCCGGC	1 cut(s)	70
Kzo9I	GATC	4 cut(s)	176, 346, 359, 576
LguI	GCTCTTC	1 cut(s)	273
LmnI	GCTCC	4 cut(s)	58, 112, 533, 565
Lsp1109I	GCAGC	2 cut(s)	275, 906
LweI	GCATC	1 cut(s)	864
MabI	ACCWGGT	1 cut(s)	405
MaeII	ACGT	1 cut(s)	625
MaeIII	GTNAC	2 cut(s)	76, 964
MalI	GATC	4 cut(s)	178, 348, 361, 578
MboI	GATC	4 cut(s)	176, 346, 359, 576
MboII	GAAGA	9 cut(s)	26, 31, 260, 379, 571, 785, 795, 832, 833
MflI	RGATCY	1 cut(s)	576
MhlI	GDGCHC	1 cut(s)	538
MluCI	AATT	4 cut(s)	27, 120, 495, 859
MlyI	GAGTC	1 cut(s)	939
MmeI	TCCRAC	2 cut(s)	154, 809
MroI	TCCGGA	3 cut(s)	411, 637, 729
MroNI	GCCGGC	1 cut(s)	68
MroXI	GAANNNNTTC	1 cut(s)	986
MseI	TTAA	6 cut(s)	123, 156, 707, 768, 867, 926
MspCI	CTTAAG	2 cut(s)	866, 925
MspI	CCGG	4 cut(s)	69, 412, 638, 730
MspR9I	CCNGG	1 cut(s)	407
MvaI	CCWGG	1 cut(s)	407
MwoI	GCNNNNNNNGC	2 cut(s)	98, 242
NaeI	GCCGGC	1 cut(s)	70
NdeII	GATC	4 cut(s)	176, 346, 359, 576
NgoMIV	GCCGGC	1 cut(s)	68
NlaIII	CATG	2 cut(s)	280, 632
NlaIV	GGNNCC	2 cut(s)	535, 948
NmuCI	GTSAC	2 cut(s)	76, 964
PaeR7I	CTCGAG	4 cut(s)	113, 330, 511, 939
PceI	AGGCCT	1 cut(s)	543
PciSI	GCTCTTC	1 cut(s)	273
PdiI	GCCGGC	1 cut(s)	70
PdmI	GAANNNNTTC	1 cut(s)	986
PfeI	GAWTC	5 cut(s)	35, 40, 127, 527, 894
PflFI	GACNNNGTC	1 cut(s)	407
PkrI	GCNGC	3 cut(s)	74, 265, 921
PleI	GAGTC	1 cut(s)	938
PpsI	GAGTC	1 cut(s)	938
Psp6I	CCWGG	1 cut(s)	405
PspGI	CCWGG	1 cut(s)	405
PspN4I	GGNNCC	2 cut(s)	535, 948
PspPI	GGNCC	2 cut(s)	335, 409
PspXI	VCTCGAGB	2 cut(s)	113, 330
PstNI	CAGNNNCTG	2 cut(s)	686, 962
PsuI	RGATCY	1 cut(s)	576
PsyI	GACNNNGTC	1 cut(s)	407
RsaI	GTAC	2 cut(s)	376, 876
RsaNI	GTAC	2 cut(s)	375, 875
SapI	GCTCTTC	1 cut(s)	273
SaqAI	TTAA	6 cut(s)	123, 156, 707, 768, 867, 926
SatI	GCNGC	3 cut(s)	73, 264, 920
Sau3AI	GATC	4 cut(s)	176, 346, 359, 576
Sau96I	GGNCC	2 cut(s)	335, 409
SchI	GAGTC	1 cut(s)	939
ScrFI	CCNGG	1 cut(s)	407
SduI	GDGCHC	1 cut(s)	538
SexAI	ACCWGGT	1 cut(s)	405
SfaNI	GCATC	1 cut(s)	864
SfcI	CTRYAG	1 cut(s)	220
Sfr274I	CTCGAG	4 cut(s)	113, 330, 511, 939
SinI	GGWCC	1 cut(s)	409
SlaI	CTCGAG	4 cut(s)	113, 330, 511, 939
SmlI	CTYRAG	6 cut(s)	113, 330, 511, 866, 925, 939
SmoI	CTYRAG	6 cut(s)	113, 330, 511, 866, 925, 939
Sse9I	AATT	4 cut(s)	27, 120, 495, 859
SseBI	AGGCCT	1 cut(s)	543
SsiI	CCGC	5 cut(s)	5, 72, 99, 380, 935
StuI	AGGCCT	1 cut(s)	543
StyD4I	CCNGG	1 cut(s)	405
TaaI	ACNGT	2 cut(s)	879, 901
TaiI	ACGT	1 cut(s)	628
TaqI	TCGA	6 cut(s)	38, 114, 331, 512, 720, 940
TasI	AATT	4 cut(s)	27, 120, 495, 859
TauI	GCSGC	1 cut(s)	75
TfiI	GAWTC	5 cut(s)	35, 40, 127, 527, 894
Tru1I	TTAA	6 cut(s)	123, 156, 707, 768, 867, 926
Tru9I	TTAA	6 cut(s)	123, 156, 707, 768, 867, 926
TscAI	CASTG	1 cut(s)	906
TseFI	GTSAC	2 cut(s)	76, 964
TseI	GCWGC	2 cut(s)	263, 919
Tsp45I	GTSAC	2 cut(s)	76, 964
TspDTI	ATGAA	3 cut(s)	260, 635, 929
TspGWI	ACGGA	1 cut(s)	39
TspRI	CASTG	1 cut(s)	906
Tth111I	GACNNNGTC	1 cut(s)	407
Vha464I	CTTAAG	2 cut(s)	866, 925
VpaK11BI	GGWCC	1 cut(s)	409
XhoI	CTCGAG	4 cut(s)	113, 330, 511, 939
XmnI	GAANNNNTTC	1 cut(s)	986

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.