Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0006524

Physical Location & Seq

Genomic Coordinates Reverse (-)

19381196 .. 19383901

Gene Structure 2706 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G212900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1026 bp

ATGGCAAAGAAAAGAGAAGAGAGAGAGATGAATACCTACCTGGATGGGATAATAGAGGCCATGCCTGTGTTTGCCAAAGAGCTGATTGCTGGTGGTGTTGCGGGTGGTGTTGCAAAGACTGTTGTTGCACCACTTGAACGTATCAAGATTTTGTTTCAGACCAGAAGAGCAGAGTATCAAAGCATAGGGCTGTTTGGATCCATTAAGAAAATTGCAAAGACAGAAGGGCCTTTGGGTTTCTACAGAGGAAACGGAGCTAGTGTTGCAAGAATTGTTCCCTATGCAGCTTTGCATTATATGACCTATGAACAATACCGCAGATGGATTATTCTCACCTTTCCTGACGTGGGGCGTGGACCTGGTCTAGATCTTGTGGCAGGGTCTTTTGCTGGAGGAACAGCGGTGCTTTTTACTTATCCTCTTGATTTAGTTCGGACTAAGTTGGCTTATCAGGTTGTTGGTTCACCGAAGTTAAATGTTCAAGGGGTAGTAAATACTGGACAAATTTATAAAGGAATTCTTGATTGTTTCTCGAAGACTTACAGAGAGGCTGGACTTAGAGGCCTCTATCGCGGTGTTGCTCCATCACTTTATGGAATCTTCCCATATGCCGGTTTGAAGTTTTACTTCTATGAGGAGATGAAGCGACATGTCCCTCAGGAGCACAAGAAGAGTATTATGGTCAAACTTGTATGTGGTTCTGTTGCTGGTCTATTAGGTCAGACTTTTACATATCCCCTCGATGTGGTGAGGAGGCAAATGCAGGTTCAACGAATTGTGTCATCAAACAGTCCAGAGATGAAAGGGACAATGGAAGTCCTTGTCATGATCGCTCAAAAGCAAGGATGGAAGCAATTATTTTCAGGACTTAGCATCAATTACTTGAAGGTCGTACCATCTGTAGCAATCGGGTTTACAGTTTACGATGTTATGAAGTCCTACCTTCGAGTTCCTTCAAGGGATGAAGCTGTGACAAAATTGGTAACCAACAAAAGAAATACCCATCCATCCTCCCTTCACTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000295 GO:0003674 GO:0005215 GO:0005346 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006732 GO:0006810 GO:0006811 GO:0006820 GO:0006839 GO:0006862 GO:0008150 GO:0008152 GO:0008509 GO:0008514 GO:0009058 GO:0009108 GO:0009987 GO:0015075 GO:0015215 GO:0015216 GO:0015228 GO:0015291 GO:0015297 GO:0015605 GO:0015711 GO:0015748 GO:0015865 GO:0015868 GO:0015880 GO:0015931 GO:0015932 GO:0016020 GO:0016021 GO:0019866 GO:0022804 GO:0022857 GO:0031090 GO:0031224 GO:0031966 GO:0031967 GO:0031975 GO:0034220 GO:0035349 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051181 GO:0051182 GO:0051184 GO:0051185 GO:0051186 GO:0051188 GO:0051234 GO:0051503 GO:0055085 GO:0071077 GO:0071106 GO:0071702 GO:0071705 GO:0072530 GO:0098656 GO:1901264 GO:1901505 GO:1901679 GO:1990542 GO:1990559

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mito_carr

Protein Analysis

342

Amino Acids

37.93

Weight (kDa)

9.84

Isoelectric Point (pI)

43.77

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006524)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26180 AT4G26180
fragaria_vesca	FvH4_1g07110 FvH4_1g07110 FvH4_1g07110 FvH4_1g07110 FvH4_1g07110 FvH4_1g07110 FvH4_1g07110
malus_domestica	MD15G1204300.v1.1
prunus_persica	Prupe.7G212900_v2.0.a1 Prupe.7G212900_v2.0.a1 Prupe.7G212900_v2.0.a1 Prupe.7G212900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0093001
rosa_laevigata	RLG00000016358
rosa_multiflora	Rmu_sc0000965.1_g000022
rosa_roxburghii	Rroxscaffold_2G00148630
rosa_rugosa	Rorug02G0031300 Rorug02G0031400 Rorug02G0031500
rosa_samantha	Rh2AG077100 Rh2BG078500 Rh2CG080700 Rh2DG075800
rosa_wichuraiana	Rw2G006910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	510
Acc36I	ACCTGC	1 cut(s)	754
AccII	CGCG	1 cut(s)	573
AciI	CCGC	4 cut(s)	101, 316, 401, 573
AclWI	GGATC	2 cut(s)	192, 205
AcsI	RAATTY	2 cut(s)	504, 516
AfaI	GTAC	1 cut(s)	894
AfiI	CCNNNNNNNGG	3 cut(s)	347, 611, 745
AflIII	ACRYGT	1 cut(s)	649
AgsI	TTSAA	6 cut(s)	137, 482, 619, 770, 886, 957
AjiI	CACGTC	1 cut(s)	346
AjnI	CCWGG	2 cut(s)	39, 358
AluBI	AGCT	4 cut(s)	82, 257, 287, 968
AluI	AGCT	4 cut(s)	82, 257, 287, 968
Alw21I	GWGCWC	1 cut(s)	666
AlwI	GGATC	2 cut(s)	192, 205
AoxI	GGCC	3 cut(s)	57, 227, 562
ApeKI	GCWGC	1 cut(s)	284
ApoI	RAATTY	2 cut(s)	504, 516
AspS9I	GGNCC	2 cut(s)	227, 356
AsuHPI	GGTGA	3 cut(s)	325, 456, 760
AvaII	GGWCC	1 cut(s)	356
AxyI	CCTNAGG	1 cut(s)	657
BamHI	GGATCC	1 cut(s)	197
BbsI	GAAGAC	1 cut(s)	542
Bbv12I	GWGCWC	1 cut(s)	666
BbvI	GCAGC	1 cut(s)	296
BccI	CCATC	7 cut(s)	38, 315, 592, 840, 904, 1011, 1015
BciT130I	CCWGG	2 cut(s)	41, 360
BfaI	CTAG	3 cut(s)	258, 365, 1024
BfmI	CTRYAG	2 cut(s)	241, 900
BfuAI	ACCTGC	1 cut(s)	754
BglII	AGATCT	1 cut(s)	367
BisI	GCNGC	1 cut(s)	285
BlsI	GCNGC	1 cut(s)	286
Bme1390I	CCNGG	2 cut(s)	41, 360
Bme18I	GGWCC	1 cut(s)	356
BmgBI	CACGTC	1 cut(s)	346
BmgT120I	GGNCC	2 cut(s)	227, 356
BmiI	GGNNCC	1 cut(s)	199
BmrFI	CCNGG	2 cut(s)	41, 360
BmsI	GCATC	1 cut(s)	882
BpiI	GAAGAC	1 cut(s)	542
BpmI	CTGGAG	1 cut(s)	411
BsaXI	ACNNNNNCTCC	2 cut(s)	246, 276
Bsc4I	CCNNNNNNNGG	3 cut(s)	347, 611, 745
Bse118I	RCCGGY	1 cut(s)	611
Bse1I	ACTGG	1 cut(s)	502
Bse21I	CCTNAGG	1 cut(s)	657
BseBI	CCWGG	2 cut(s)	41, 360
BseGI	GGATG	5 cut(s)	49, 851, 967, 1003, 1007
BseLI	CCNNNNNNNGG	3 cut(s)	347, 611, 745
BseMII	CTCAG	1 cut(s)	671
BseNI	ACTGG	1 cut(s)	502
BseRI	GAGGAG	2 cut(s)	650, 766
BseXI	GCAGC	1 cut(s)	296
Bsh1236I	CGCG	1 cut(s)	573
BshFI	GGCC	3 cut(s)	59, 229, 564
BsiHKAI	GWGCWC	1 cut(s)	666
BsiSI	CCGG	1 cut(s)	612
BslFI	GGGAC	2 cut(s)	638, 820
BslI	CCNNNNNNNGG	3 cut(s)	347, 611, 745
BsmFI	GGGAC	2 cut(s)	638, 820
BsnI	GGCC	3 cut(s)	59, 229, 564
Bsp1286I	GDGCHC	1 cut(s)	666
Bsp143I	GATC	3 cut(s)	197, 367, 828
BspACI	CCGC	4 cut(s)	101, 316, 401, 573
BspANI	GGCC	3 cut(s)	59, 229, 564
BspCNI	CTCAG	1 cut(s)	670
BspFNI	CGCG	1 cut(s)	573
BspHI	TCATGA	1 cut(s)	825
BspLI	GGNNCC	1 cut(s)	199
BspMI	ACCTGC	1 cut(s)	754
BspPI	GGATC	2 cut(s)	192, 205
BspQI	GCTCTTC	1 cut(s)	160
BsrFI	RCCGGY	1 cut(s)	611
BsrI	ACTGG	1 cut(s)	502
BssAI	RCCGGY	1 cut(s)	611
BssMI	GATC	3 cut(s)	197, 367, 828
Bst2UI	CCWGG	2 cut(s)	41, 360
Bst4CI	ACNGT	3 cut(s)	121, 791, 919
Bst6I	CTCTTC	3 cut(s)	12, 160, 665
BstDEI	CTNAG	4 cut(s)	438, 557, 657, 869
BstEII	GGTNACC	1 cut(s)	982
BstF5I	GGATG	5 cut(s)	49, 851, 967, 1003, 1007
BstFNI	CGCG	1 cut(s)	573
BstKTI	GATC	3 cut(s)	200, 370, 831
BstMBI	GATC	3 cut(s)	197, 367, 828
BstMWI	GCNNNNNNNGC	2 cut(s)	263, 570
BstNI	CCWGG	2 cut(s)	41, 360
BstNSI	RCATGY	1 cut(s)	653
BstPI	GGTNACC	1 cut(s)	982
BstSCI	CCNGG	2 cut(s)	39, 358
BstSFI	CTRYAG	2 cut(s)	241, 900
BstUI	CGCG	1 cut(s)	573
BstV1I	GCAGC	1 cut(s)	296
BstV2I	GAAGAC	1 cut(s)	542
BstX2I	RGATCY	2 cut(s)	197, 367
BstYI	RGATCY	2 cut(s)	197, 367
Bsu36I	CCTNAGG	1 cut(s)	657
BsuRI	GGCC	3 cut(s)	59, 229, 564
BtrI	CACGTC	1 cut(s)	346
BtsCI	GGATG	5 cut(s)	49, 851, 967, 1003, 1007
BveI	ACCTGC	1 cut(s)	754
CciI	TCATGA	1 cut(s)	825
Cfr10I	RCCGGY	1 cut(s)	611
Cfr13I	GGNCC	2 cut(s)	227, 356
CsiI	ACCWGGT	1 cut(s)	358
Csp6I	GTAC	1 cut(s)	893
CviAII	CATG	3 cut(s)	61, 650, 826
CviQI	GTAC	1 cut(s)	893
DdeI	CTNAG	4 cut(s)	438, 557, 657, 869
DpnI	GATC	3 cut(s)	199, 369, 830
DpnII	GATC	3 cut(s)	197, 367, 828
Eam1104I	CTCTTC	3 cut(s)	12, 160, 665
EarI	CTCTTC	3 cut(s)	12, 160, 665
Eco147I	AGGCCT	1 cut(s)	564
Eco47I	GGWCC	1 cut(s)	356
Eco81I	CCTNAGG	1 cut(s)	657
Eco91I	GGTNACC	1 cut(s)	982
EcoO109I	RGGNCCY	1 cut(s)	227
EcoO65I	GGTNACC	1 cut(s)	982
EcoRI	GAATTC	1 cut(s)	516
EcoRII	CCWGG	2 cut(s)	39, 358
FaeI	CATG	3 cut(s)	64, 653, 829
FalI	AAGNNNNNCTT	4 cut(s)	504, 536, 611, 643
FaqI	GGGAC	2 cut(s)	638, 820
FatI	CATG	3 cut(s)	60, 649, 825
FauI	CCCGC	1 cut(s)	94
FauNDI	CATATG	1 cut(s)	607
Fnu4HI	GCNGC	1 cut(s)	285
FokI	GGATG	5 cut(s)	56, 858, 974, 990, 994
Fsp4HI	GCNGC	1 cut(s)	285
FspBI	CTAG	3 cut(s)	258, 365, 1024
GluI	GCNGC	1 cut(s)	285
GsuI	CTGGAG	1 cut(s)	411
HaeIII	GGCC	3 cut(s)	59, 229, 564
HapII	CCGG	1 cut(s)	612
Hin1II	CATG	3 cut(s)	64, 653, 829
HinfI	GANTC	1 cut(s)	597
HpaII	CCGG	1 cut(s)	612
HphI	GGTGA	3 cut(s)	325, 456, 760
Hpy166II	GTNNAC	4 cut(s)	356, 464, 915, 922
Hpy188I	TCNGA	3 cut(s)	159, 435, 723
Hpy8I	GTNNAC	4 cut(s)	356, 464, 915, 922
HpyAV	CCTTC	5 cut(s)	218, 880, 953, 963, 1025
HpyCH4III	ACNGT	3 cut(s)	121, 791, 919
HpyCH4IV	ACGT	2 cut(s)	139, 345
HpyCH4V	TGCA	7 cut(s)	113, 128, 215, 266, 284, 292, 763
HpyF10VI	GCNNNNNNNGC	2 cut(s)	263, 570
HpyF3I	CTNAG	4 cut(s)	438, 557, 657, 869
HpySE526I	ACGT	2 cut(s)	139, 345
Hsp92II	CATG	3 cut(s)	64, 653, 829
Kzo9I	GATC	3 cut(s)	197, 367, 828
LguI	GCTCTTC	1 cut(s)	160
LmnI	GCTCC	3 cut(s)	254, 586, 661
Lsp1109I	GCAGC	1 cut(s)	296
LweI	GCATC	1 cut(s)	882
MabI	ACCWGGT	1 cut(s)	358
MaeI	CTAG	3 cut(s)	258, 365, 1024
MaeII	ACGT	2 cut(s)	139, 345
MaeIII	GTNAC	2 cut(s)	970, 982
MalI	GATC	3 cut(s)	199, 369, 830
MboI	GATC	3 cut(s)	197, 367, 828
MboII	GAAGA	5 cut(s)	29, 177, 547, 592, 682
MflI	RGATCY	2 cut(s)	197, 367
MhlI	GDGCHC	1 cut(s)	666
MluCI	AATT	8 cut(s)	210, 270, 504, 516, 774, 854, 877, 977
MseI	TTAA	2 cut(s)	204, 473
MslI	CAYNNNNRTG	1 cut(s)	65
MspA1I	CMGCKG	1 cut(s)	401
MspI	CCGG	1 cut(s)	612
MspR9I	CCNGG	2 cut(s)	41, 360
MvaI	CCWGG	2 cut(s)	41, 360
MvnI	CGCG	1 cut(s)	573
MwoI	GCNNNNNNNGC	2 cut(s)	263, 570
NdeI	CATATG	1 cut(s)	607
NdeII	GATC	3 cut(s)	197, 367, 828
NlaIII	CATG	3 cut(s)	64, 653, 829
NlaIV	GGNNCC	1 cut(s)	199
NmuCI	GTSAC	1 cut(s)	970
NspI	RCATGY	1 cut(s)	653
PagI	TCATGA	1 cut(s)	825
PceI	AGGCCT	1 cut(s)	564
PciI	ACATGT	1 cut(s)	649
PciSI	GCTCTTC	1 cut(s)	160
PfeI	GAWTC	1 cut(s)	597
PflFI	GACNNNGTC	1 cut(s)	360
PkrI	GCNGC	1 cut(s)	286
PscI	ACATGT	1 cut(s)	649
PsiI	TTATAA	1 cut(s)	510
Psp6I	CCWGG	2 cut(s)	39, 358
PspEI	GGTNACC	1 cut(s)	982
PspGI	CCWGG	2 cut(s)	39, 358
PspN4I	GGNNCC	1 cut(s)	199
PspPI	GGNCC	2 cut(s)	227, 356
PsuI	RGATCY	2 cut(s)	197, 367
PsyI	GACNNNGTC	1 cut(s)	360
RsaI	GTAC	1 cut(s)	894
RsaNI	GTAC	1 cut(s)	893
RseI	CAYNNNNRTG	1 cut(s)	65
SapI	GCTCTTC	1 cut(s)	160
SaqAI	TTAA	2 cut(s)	204, 473
SatI	GCNGC	1 cut(s)	285
Sau3AI	GATC	3 cut(s)	197, 367, 828
Sau96I	GGNCC	2 cut(s)	227, 356
ScrFI	CCNGG	2 cut(s)	41, 360
SduI	GDGCHC	1 cut(s)	666
SexAI	ACCWGGT	1 cut(s)	358
SfaNI	GCATC	1 cut(s)	882
SfcI	CTRYAG	2 cut(s)	241, 900
SinI	GGWCC	1 cut(s)	356
SmiMI	CAYNNNNRTG	1 cut(s)	65
Sse9I	AATT	8 cut(s)	210, 270, 504, 516, 774, 854, 877, 977
SseBI	AGGCCT	1 cut(s)	564
SsiI	CCGC	4 cut(s)	101, 316, 401, 573
SspMI	CTAG	3 cut(s)	258, 365, 1024
StuI	AGGCCT	1 cut(s)	564
StyD4I	CCNGG	2 cut(s)	39, 358
TaaI	ACNGT	3 cut(s)	121, 791, 919
TaiI	ACGT	2 cut(s)	142, 348
TaqI	TCGA	3 cut(s)	533, 741, 946
TasI	AATT	8 cut(s)	210, 270, 504, 516, 774, 854, 877, 977
TfiI	GAWTC	1 cut(s)	597
Tru1I	TTAA	2 cut(s)	204, 473
Tru9I	TTAA	2 cut(s)	204, 473
TseFI	GTSAC	1 cut(s)	970
TseI	GCWGC	1 cut(s)	284
Tsp45I	GTSAC	1 cut(s)	970
TspDTI	ATGAA	6 cut(s)	44, 321, 656, 815, 947, 978
TspGWI	ACGGA	1 cut(s)	267
Tth111I	GACNNNGTC	1 cut(s)	360
VpaK11BI	GGWCC	1 cut(s)	356
XapI	RAATTY	2 cut(s)	504, 516
XbaI	TCTAGA	1 cut(s)	364
XceI	RCATGY	1 cut(s)	653
XspI	CTAG	3 cut(s)	258, 365, 1024

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.