RPR
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G31200 AT4G31200 AT4G31200 |
| fragaria_vesca | FvH4_2g36600 |
| malus_domestica | MD08G1126000.v1.1 MD15G1105800.v1.1 |
| prunus_persica | Prupe.1G457600_v2.0.a1 Prupe.1G457600_v2.0.a1 Prupe.1G457600_v2.0.a1 |
| pyrus_communis | pycom08g10510 pycom15g09600 pycom15g09640 |
| rosa_chinensis | RchiOBHm_Chr6g0305221 |
| rosa_laevigata | RLG00000010907 |
| rosa_multiflora | Rmu_co8150504.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00163030 |
| rosa_rugosa | Rorug06G0338700 |
| rosa_samantha | Rh6AG450400 Rh6BG451000 Rh6CG464300 Rh6DG451000 |
| rosa_wichuraiana | Rw6G039250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 1234, 1456 |
| Acc36I | ACCTGC | 2 cut(s) | 1234, 1456 |
| AccB1I | GGYRCC | 2 cut(s) | 1391, 1733 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 326, 1451 |
| AccBSI | CCGCTC | 1 cut(s) | 1708 |
| AclWI | GGATC | 7 cut(s) | 12, 362, 551, 1489, 1681, 1825, 1844 |
| AcsI | RAATTY | 1 cut(s) | 1327 |
| AcuI | CTGAAG | 1 cut(s) | 1623 |
| AfaI | GTAC | 4 cut(s) | 636, 1608, 1871, 1909 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 104, 326, 545, 1073, 1086, 1451, 1504, 1661, 1778 |
| AgsI | TTSAA | 4 cut(s) | 83, 579, 624, 1633 |
| AjnI | CCWGG | 7 cut(s) | 325, 541, 637, 1279, 1387, 1486, 1498 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 133, 165, 699, 731 |
| AluBI | AGCT | 9 cut(s) | 365, 376, 397, 703, 914, 989, 1052, 1847, 1940 |
| AluI | AGCT | 9 cut(s) | 365, 376, 397, 703, 914, 989, 1052, 1847, 1940 |
| Alw26I | GTCTC | 3 cut(s) | 927, 1318, 1769 |
| AlwI | GGATC | 7 cut(s) | 12, 362, 551, 1489, 1681, 1825, 1844 |
| Ama87I | CYCGRG | 2 cut(s) | 1610, 1772 |
| ApoI | RAATTY | 1 cut(s) | 1327 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 926, 958, 986, 1018 |
| AspLEI | GCGC | 1 cut(s) | 739 |
| AspS9I | GGNCC | 8 cut(s) | 71, 329, 422, 548, 794, 1220, 1664, 1768 |
| AsuC2I | CCSGG | 1 cut(s) | 1401 |
| AsuHPI | GGTGA | 6 cut(s) | 129, 239, 299, 503, 1466, 1655 |
| AvaI | CYCGRG | 2 cut(s) | 1610, 1772 |
| AvaII | GGWCC | 8 cut(s) | 71, 329, 422, 548, 794, 1220, 1664, 1768 |
| AxyI | CCTNAGG | 1 cut(s) | 276 |
| BanI | GGYRCC | 2 cut(s) | 1391, 1733 |
| BanII | GRGCYC | 1 cut(s) | 1556 |
| BauI | CACGAG | 1 cut(s) | 1034 |
| BbsI | GAAGAC | 1 cut(s) | 16 |
| BccI | CCATC | 4 cut(s) | 142, 1196, 1498, 1787 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 8, 42 |
| BciT130I | CCWGG | 7 cut(s) | 327, 543, 639, 1281, 1389, 1488, 1500 |
| BciVI | GTATCC | 1 cut(s) | 141 |
| BclI | TGATCA | 2 cut(s) | 760, 1177 |
| BcnI | CCSGG | 1 cut(s) | 1401 |
| BcoDI | GTCTC | 3 cut(s) | 927, 1318, 1769 |
| BfaI | CTAG | 2 cut(s) | 986, 1317 |
| BfmI | CTRYAG | 2 cut(s) | 377, 1760 |
| BfuAI | ACCTGC | 2 cut(s) | 1234, 1456 |
| BfuI | GTATCC | 1 cut(s) | 141 |
| BglII | AGATCT | 1 cut(s) | 896 |
| BlpI | GCTNAGC | 1 cut(s) | 51 |
| BmcAI | AGTACT | 1 cut(s) | 1608 |
| Bme1390I | CCNGG | 8 cut(s) | 327, 543, 639, 1281, 1389, 1401, 1488, 1500 |
| Bme18I | GGWCC | 8 cut(s) | 71, 329, 422, 548, 794, 1220, 1664, 1768 |
| BmeT110I | CYCGRG | 2 cut(s) | 1610, 1772 |
| BmgT120I | GGNCC | 8 cut(s) | 71, 329, 422, 548, 794, 1220, 1664, 1768 |
| BmiI | GGNNCC | 7 cut(s) | 550, 1078, 1393, 1405, 1666, 1735, 1770 |
| BmrFI | CCNGG | 8 cut(s) | 327, 543, 639, 1281, 1389, 1401, 1488, 1500 |
| BpiI | GAAGAC | 1 cut(s) | 16 |
| BpmI | CTGGAG | 2 cut(s) | 345, 564 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 51 |
| BpuEI | CTTGAG | 1 cut(s) | 1220 |
| BpuMI | CCSGG | 1 cut(s) | 1401 |
| BsaBI | GATNNNNATC | 2 cut(s) | 759, 1678 |
| BsaJI | CCNNGG | 6 cut(s) | 325, 541, 781, 1498, 1499, 1668 |
| BsaWI | WCCGGW | 1 cut(s) | 1348 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1175, 1205 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 104, 326, 545, 1073, 1086, 1451, 1504, 1661, 1778 |
| Bse1I | ACTGG | 1 cut(s) | 1126 |
| Bse21I | CCTNAGG | 1 cut(s) | 276 |
| Bse3DI | GCAATG | 2 cut(s) | 822, 954 |
| Bse8I | GATNNNNATC | 2 cut(s) | 759, 1678 |
| BseBI | CCWGG | 7 cut(s) | 327, 543, 639, 1281, 1389, 1488, 1500 |
| BseDI | CCNNGG | 6 cut(s) | 325, 541, 781, 1498, 1499, 1668 |
| BseJI | GATNNNNATC | 2 cut(s) | 759, 1678 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 104, 326, 545, 1073, 1086, 1451, 1504, 1661, 1778 |
| BseMI | GCAATG | 2 cut(s) | 822, 954 |
| BseMII | CTCAG | 5 cut(s) | 65, 140, 290, 417, 1880 |
| BseNI | ACTGG | 1 cut(s) | 1126 |
| BseRI | GAGGAG | 8 cut(s) | 156, 234, 336, 339, 342, 345, 348, 1183 |
| BseYI | CCCAGC | 1 cut(s) | 1084 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1353 |
| BshNI | GGYRCC | 2 cut(s) | 1391, 1733 |
| BsiEI | CGRYCG | 1 cut(s) | 1353 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1610, 1772 |
| BsiSI | CCGG | 2 cut(s) | 1349, 1401 |
| BslFI | GGGAC | 2 cut(s) | 1650, 1845 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 104, 326, 545, 1073, 1086, 1451, 1504, 1661, 1778 |
| BsmAI | GTCTC | 3 cut(s) | 927, 1318, 1769 |
| BsmFI | GGGAC | 2 cut(s) | 1650, 1845 |
| BsmI | GAATGC | 3 cut(s) | 151, 1290, 1740 |
| BsoBI | CYCGRG | 2 cut(s) | 1610, 1772 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1556 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 51 |
| Bsp19I | CCATGG | 1 cut(s) | 1668 |
| BspCNI | CTCAG | 5 cut(s) | 64, 139, 289, 418, 1879 |
| BspLI | GGNNCC | 7 cut(s) | 550, 1078, 1393, 1405, 1666, 1735, 1770 |
| BspMAI | CTGCAG | 1 cut(s) | 381 |
| BspMI | ACCTGC | 2 cut(s) | 1234, 1456 |
| BspPI | GGATC | 7 cut(s) | 12, 362, 551, 1489, 1681, 1825, 1844 |
| BspT107I | GGYRCC | 2 cut(s) | 1391, 1733 |
| BsrBI | CCGCTC | 1 cut(s) | 1708 |
| BsrDI | GCAATG | 2 cut(s) | 822, 954 |
| BsrI | ACTGG | 1 cut(s) | 1126 |
| BssECI | CCNNGG | 6 cut(s) | 325, 541, 781, 1498, 1499, 1668 |
| BssSI | CACGAG | 1 cut(s) | 1034 |
| BssT1I | CCWWGG | 1 cut(s) | 1668 |
| Bst2BI | CACGAG | 1 cut(s) | 1034 |
| Bst2UI | CCWGG | 7 cut(s) | 327, 543, 639, 1281, 1389, 1488, 1500 |
| Bst4CI | ACNGT | 5 cut(s) | 333, 422, 1010, 1307, 1573 |
| Bst6I | CTCTTC | 1 cut(s) | 1007 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 205, 1265 |
| BstC8I | GCNNGC | 1 cut(s) | 1738 |
| BstDEI | CTNAG | 9 cut(s) | 51, 126, 276, 426, 876, 929, 1164, 1623, 1866 |
| BstDSI | CCRYGG | 1 cut(s) | 1668 |
| BstEII | GGTNACC | 1 cut(s) | 39 |
| BstHHI | GCGC | 1 cut(s) | 739 |
| BstMAI | GTCTC | 3 cut(s) | 927, 1318, 1769 |
| BstMCI | CGRYCG | 1 cut(s) | 1353 |
| BstNI | CCWGG | 7 cut(s) | 327, 543, 639, 1281, 1389, 1488, 1500 |
| BstNSI | RCATGY | 1 cut(s) | 1268 |
| BstPI | GGTNACC | 1 cut(s) | 39 |
| BstSCI | CCNGG | 8 cut(s) | 325, 541, 637, 1279, 1387, 1399, 1486, 1498 |
| BstSFI | CTRYAG | 2 cut(s) | 377, 1760 |
| BstV2I | GAAGAC | 1 cut(s) | 16 |
| BstX2I | RGATCY | 3 cut(s) | 896, 1673, 1817 |
| BstYI | RGATCY | 3 cut(s) | 896, 1673, 1817 |
| Bsu36I | CCTNAGG | 1 cut(s) | 276 |
| BsuI | GTATCC | 1 cut(s) | 141 |
| BtgI | CCRYGG | 1 cut(s) | 1668 |
| BveI | ACCTGC | 2 cut(s) | 1234, 1456 |
| Cac8I | GCNNGC | 1 cut(s) | 1738 |
| CfoI | GCGC | 1 cut(s) | 739 |
| Cfr13I | GGNCC | 8 cut(s) | 71, 329, 422, 548, 794, 1220, 1664, 1768 |
| CsiI | ACCWGGT | 1 cut(s) | 637 |
| Csp6I | GTAC | 4 cut(s) | 635, 1607, 1870, 1908 |
| CviQI | GTAC | 4 cut(s) | 635, 1607, 1870, 1908 |
| DdeI | CTNAG | 9 cut(s) | 51, 126, 276, 426, 876, 929, 1164, 1623, 1866 |
| Eam1104I | CTCTTC | 1 cut(s) | 1007 |
| EarI | CTCTTC | 1 cut(s) | 1007 |
| EciI | GGCGGA | 3 cut(s) | 306, 588, 653 |
| Eco130I | CCWWGG | 1 cut(s) | 1668 |
| Eco24I | GRGCYC | 1 cut(s) | 1556 |
| Eco32I | GATATC | 1 cut(s) | 1564 |
| Eco47I | GGWCC | 8 cut(s) | 71, 329, 422, 548, 794, 1220, 1664, 1768 |
| Eco57I | CTGAAG | 1 cut(s) | 1623 |
| Eco81I | CCTNAGG | 1 cut(s) | 276 |
| Eco88I | CYCGRG | 2 cut(s) | 1610, 1772 |
| Eco91I | GGTNACC | 1 cut(s) | 39 |
| EcoO109I | RGGNCCY | 3 cut(s) | 71, 548, 1664 |
| EcoO65I | GGTNACC | 1 cut(s) | 39 |
| EcoRII | CCWGG | 7 cut(s) | 325, 541, 637, 1279, 1387, 1486, 1498 |
| EcoRV | GATATC | 1 cut(s) | 1564 |
| EcoT14I | CCWWGG | 1 cut(s) | 1668 |
| EcoT22I | ATGCAT | 2 cut(s) | 210, 537 |
| EcoT38I | GRGCYC | 1 cut(s) | 1556 |
| ErhI | CCWWGG | 1 cut(s) | 1668 |
| FaqI | GGGAC | 2 cut(s) | 1650, 1845 |
| FauI | CCCGC | 1 cut(s) | 1701 |
| FauNDI | CATATG | 1 cut(s) | 1786 |
| FbaI | TGATCA | 2 cut(s) | 760, 1177 |
| FriOI | GRGCYC | 1 cut(s) | 1556 |
| FspBI | CTAG | 2 cut(s) | 986, 1317 |
| GlaI | GCGC | 1 cut(s) | 738 |
| GsaI | CCCAGC | 1 cut(s) | 1088 |
| GsuI | CTGGAG | 2 cut(s) | 345, 564 |
| HapII | CCGG | 2 cut(s) | 1349, 1401 |
| HhaI | GCGC | 1 cut(s) | 739 |
| Hin6I | GCGC | 1 cut(s) | 737 |
| HinP1I | GCGC | 1 cut(s) | 737 |
| HincII | GTYRAC | 3 cut(s) | 266, 768, 1651 |
| HindII | GTYRAC | 3 cut(s) | 266, 768, 1651 |
| HindIII | AAGCTT | 1 cut(s) | 395 |
| HinfI | GANTC | 5 cut(s) | 338, 616, 860, 956, 1679 |
| HpaII | CCGG | 2 cut(s) | 1349, 1401 |
| HphI | GGTGA | 6 cut(s) | 129, 239, 299, 503, 1466, 1655 |
| Hpy166II | GTNNAC | 8 cut(s) | 266, 768, 797, 1013, 1220, 1651, 1718, 1768 |
| Hpy188I | TCNGA | 9 cut(s) | 107, 782, 961, 1064, 1341, 1511, 1588, 1603, 1678 |
| Hpy188III | TCNNGA | 8 cut(s) | 371, 425, 467, 752, 1181, 1199, 1559, 1612 |
| Hpy8I | GTNNAC | 8 cut(s) | 266, 768, 797, 1013, 1220, 1651, 1718, 1768 |
| HpyAV | CCTTC | 9 cut(s) | 183, 296, 320, 451, 488, 630, 1014, 1593, 1655 |
| HpyCH4III | ACNGT | 5 cut(s) | 333, 422, 1010, 1307, 1573 |
| HpyCH4IV | ACGT | 2 cut(s) | 1132, 1276 |
| HpyF3I | CTNAG | 9 cut(s) | 51, 126, 276, 426, 876, 929, 1164, 1623, 1866 |
| HpySE526I | ACGT | 2 cut(s) | 1132, 1276 |
| HspAI | GCGC | 1 cut(s) | 737 |
| Ksp22I | TGATCA | 2 cut(s) | 760, 1177 |
| LmnI | GCTCC | 2 cut(s) | 349, 708 |
| MabI | ACCWGGT | 1 cut(s) | 637 |
| MaeI | CTAG | 2 cut(s) | 986, 1317 |
| MaeII | ACGT | 2 cut(s) | 1132, 1276 |
| MaeIII | GTNAC | 2 cut(s) | 39, 1128 |
| MbiI | CCGCTC | 1 cut(s) | 1708 |
| MboII | GAAGA | 9 cut(s) | 21, 24, 224, 567, 707, 994, 1130, 1153, 1621 |
| MflI | RGATCY | 3 cut(s) | 896, 1673, 1817 |
| MhlI | GDGCHC | 1 cut(s) | 1556 |
| MluCI | AATT | 5 cut(s) | 101, 1327, 1364, 1699, 1912 |
| MlyI | GAGTC | 2 cut(s) | 625, 869 |
| MmeI | TCCRAC | 1 cut(s) | 730 |
| Mph1103I | ATGCAT | 2 cut(s) | 210, 537 |
| MseI | TTAA | 4 cut(s) | 414, 846, 867, 1416 |
| MslI | CAYNNNNRTG | 2 cut(s) | 21, 1925 |
| MspA1I | CMGCKG | 3 cut(s) | 365, 1723, 1847 |
| MspI | CCGG | 2 cut(s) | 1349, 1401 |
| MspR9I | CCNGG | 8 cut(s) | 327, 543, 639, 1281, 1389, 1401, 1488, 1500 |
| Mva1269I | GAATGC | 3 cut(s) | 151, 1290, 1740 |
| MvaI | CCWGG | 7 cut(s) | 327, 543, 639, 1281, 1389, 1488, 1500 |
| NciI | CCSGG | 1 cut(s) | 1401 |
| NcoI | CCATGG | 1 cut(s) | 1668 |
| NdeI | CATATG | 1 cut(s) | 1786 |
| NlaIV | GGNNCC | 7 cut(s) | 550, 1078, 1393, 1405, 1666, 1735, 1770 |
| NmuCI | GTSAC | 1 cut(s) | 1128 |
| NsiI | ATGCAT | 2 cut(s) | 210, 537 |
| NspI | RCATGY | 1 cut(s) | 1268 |
| PaeR7I | CTCGAG | 1 cut(s) | 1610 |
| PaqCI | CACCTGC | 2 cut(s) | 1234, 1456 |
| PasI | CCCWGGG | 1 cut(s) | 1499 |
| PctI | GAATGC | 3 cut(s) | 151, 1290, 1740 |
| PfeI | GAWTC | 3 cut(s) | 338, 956, 1679 |
| PflFI | GACNNNGTC | 1 cut(s) | 938 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 326, 1451 |
| PfoI | TCCNGGA | 1 cut(s) | 1279 |
| PleI | GAGTC | 2 cut(s) | 624, 868 |
| PpsI | GAGTC | 2 cut(s) | 624, 868 |
| PpuMI | RGGWCCY | 3 cut(s) | 71, 548, 1664 |
| Psp5II | RGGWCCY | 3 cut(s) | 71, 548, 1664 |
| Psp6I | CCWGG | 7 cut(s) | 325, 541, 637, 1279, 1387, 1486, 1498 |
| PspEI | GGTNACC | 1 cut(s) | 39 |
| PspFI | CCCAGC | 1 cut(s) | 1084 |
| PspGI | CCWGG | 7 cut(s) | 325, 541, 637, 1279, 1387, 1486, 1498 |
| PspN4I | GGNNCC | 7 cut(s) | 550, 1078, 1393, 1405, 1666, 1735, 1770 |
| PspPI | GGNCC | 8 cut(s) | 71, 329, 422, 548, 794, 1220, 1664, 1768 |
| PspPPI | RGGWCCY | 3 cut(s) | 71, 548, 1664 |
| PstI | CTGCAG | 1 cut(s) | 381 |
| PsuI | RGATCY | 3 cut(s) | 896, 1673, 1817 |
| PsyI | GACNNNGTC | 1 cut(s) | 938 |
| PvuII | CAGCTG | 2 cut(s) | 365, 1847 |
| RsaI | GTAC | 4 cut(s) | 636, 1608, 1871, 1909 |
| RsaNI | GTAC | 4 cut(s) | 635, 1607, 1870, 1908 |
| RseI | CAYNNNNRTG | 2 cut(s) | 21, 1925 |
| SaqAI | TTAA | 4 cut(s) | 414, 846, 867, 1416 |
| Sau96I | GGNCC | 8 cut(s) | 71, 329, 422, 548, 794, 1220, 1664, 1768 |
| ScaI | AGTACT | 1 cut(s) | 1608 |
| SchI | GAGTC | 2 cut(s) | 625, 869 |
| ScrFI | CCNGG | 8 cut(s) | 327, 543, 639, 1281, 1389, 1401, 1488, 1500 |
| SduI | GDGCHC | 1 cut(s) | 1556 |
| SexAI | ACCWGGT | 1 cut(s) | 637 |
| SfcI | CTRYAG | 2 cut(s) | 377, 1760 |
| Sfr274I | CTCGAG | 1 cut(s) | 1610 |
| SinI | GGWCC | 8 cut(s) | 71, 329, 422, 548, 794, 1220, 1664, 1768 |
| SlaI | CTCGAG | 1 cut(s) | 1610 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 21, 1925 |
| SmlI | CTYRAG | 2 cut(s) | 1199, 1610 |
| SmoI | CTYRAG | 2 cut(s) | 1199, 1610 |
| Sse9I | AATT | 5 cut(s) | 101, 1327, 1364, 1699, 1912 |
| SspMI | CTAG | 2 cut(s) | 986, 1317 |
| StyD4I | CCNGG | 8 cut(s) | 325, 541, 637, 1279, 1387, 1399, 1486, 1498 |
| StyI | CCWWGG | 1 cut(s) | 1668 |
| TaaI | ACNGT | 5 cut(s) | 333, 422, 1010, 1307, 1573 |
| TaiI | ACGT | 2 cut(s) | 1135, 1279 |
| TaqI | TCGA | 3 cut(s) | 7, 1005, 1611 |
| TasI | AATT | 5 cut(s) | 101, 1327, 1364, 1699, 1912 |
| TatI | WGTACW | 1 cut(s) | 1606 |
| TauI | GCSGC | 1 cut(s) | 1465 |
| TfiI | GAWTC | 3 cut(s) | 338, 956, 1679 |
| Tru1I | TTAA | 4 cut(s) | 414, 846, 867, 1416 |
| Tru9I | TTAA | 4 cut(s) | 414, 846, 867, 1416 |
| TseFI | GTSAC | 1 cut(s) | 1128 |
| Tsp45I | GTSAC | 1 cut(s) | 1128 |
| TspDTI | ATGAA | 8 cut(s) | 101, 148, 158, 641, 877, 1062, 1226, 1340 |
| TspGWI | ACGGA | 1 cut(s) | 400 |
| Tth111I | GACNNNGTC | 1 cut(s) | 938 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 326, 1451 |
| VpaK11BI | GGWCC | 8 cut(s) | 71, 329, 422, 548, 794, 1220, 1664, 1768 |
| XapI | RAATTY | 1 cut(s) | 1327 |
| XceI | RCATGY | 1 cut(s) | 1268 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1448, 1762 |
| XhoI | CTCGAG | 1 cut(s) | 1610 |
| XspI | CTAG | 2 cut(s) | 986, 1317 |
| ZrmI | AGTACT | 1 cut(s) | 1608 |
| Zsp2I | ATGCAT | 2 cut(s) | 210, 537 |