Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0009244

Physical Location & Seq

Genomic Coordinates Reverse (-)

62342971 .. 62346004

Gene Structure 3034 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG451000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1935 bp

ATGGATCGGCAGGCCCACGACTACGCCGCCTACGCCCAACAACAACAGCAGCAGCAGCAGCGACAACCGCCGCCGCAGCCACAACAATTCGGGTACCCGCCCCAGGCCCAACAGTTTCACGGCCCTCCTTTCGGACCCCCACACCCGCCCCTCCAGCAATTCCCCTACCACCCCCACTTACAGCAGCAACCGCCGCCCCAGGTTCTCTCCCACGCGCCGCCGCCGCCTCACCCTCACCACCTCCCCCCTCCCCCGGCCTTCGCACCCCTCGTCCCCCCGCCTTTCCACGCCGGCCCTCCTCCTCCGGTCGCCGGTCCTCCCTCCGACCCGGAGCTCCACAAACGGATCGACAAGCTCGTCGAGTACTCCGCCAAGAACGGACCCGACTTCGAAGCCATGATTCGCGAGAAGCAGCAGGATAATCCCGACTACGCTTTCCTCTTCGGCGGCGAAGGCCACGGCTATTACCGTTACAAGCTCTACGCCTCCACTCGGGTCGGGTCGTTCAACCCGAATCCGCAGTTCGCTCCCCACATGCTTCGTCCTCCGCCGAATCCGATGATGAATGGGCCCCCGAACCCGATGATGGGCGGCCCGCAGTCGTATTTCTACGACCAGCAGCGGCATAATCAGCAGCCTTTCGGAGTTTATGGGAGGTCCGATTATGACCAGGCGGCGGCGCAACCCTTTAAAGGGCTTTCGGGGCCGCTGCCTCCTGATGTTGCAATGGAGCTGAGCAATGTGCTTATGACGCTGAATGGGACCAAAGAGTCGATTAAAGGAGCCAAGTTTTGGTTTATGCAGAGGTCTATTTTCGCTCCGGCTCTGGCTGAGGCTCTTAGAGAGAGGGTGTTTGGACTTGATGATCCTGAGAGGCAGCTACATGTGATATTTCTTGCCAATGACATTTTGTTCGACAGCTCACATCGTCGAACTGGTGAAGGCCTTGATAACGAATCACTTGCACTCAAACCTATCTTAGGTTCCATGCTTGCAAGGATTTATCACAACCCTCAAATAACGGAAGACAATCAGATGAAGTTGCAGCAAATTTTGCAGTTATGGGTTTCCAATAACATTTATGATCAGGATACAATTGATGCATTTAGGAATGAGATGATTGGTGGACCATCAAGTAATTCTTTTCCAGGTCTTCCAAAAGACTTAGCTACTACTTCAACAGATTCAGCAGCAGGATTGCCACAATGGCAGCCTGATAGGCAAGGCTCTGTTTCGAGTTCACACGATCAAGAGCATCTTGATAAACATGTAGCTCCTGGTCAAGTGGTGCCACTTTCCGTGCCAACCCAGCAATTTCTTCCAAATTCAGTCCCTCCTGCTGCCTTTGCTGGGCCCCTCCCCATACCATCTTCTGTTCAACCAACAATCCCACAACCCCTGCCACATTTATTGCCTGGTCAAGCTGCTACCAGCGGCGAGAAGTTGCCACCATATCCTTTGTTCCCACCTGGTCTTATTCCTGAGATGGTCAGAAAGATGCAGATTGGCAGTGGGGTGCCATACTCACCGATGAGTCCTCTGGACATTCCAACCATCATACCTCCATCCACTGTACCTCAGTCCGAAATTCTTGAGAGAGTGTCAAAGTTCTTCAAAGAGATTGGAGAAGTTAACCCTTCTGAAGGACCTATTCATGGTTCTGATGGTAGAGACGATGATGAGTACGAAAGTAGTACTCCGGCACGCAAGGGAGGAGCTTGCATCCCTCCACCCCCAAACCTGCAGGTAGACCCAGAGACGGGGGCTTATGCTGATGGAAGTGTTGATCGAAAGAGTGGCTCGGGGAGATTGGGACTCGGGGCCACAGCTAATCCAAATGAGGTGAGCCAGTACGACGATGTCTATTCTTCTTACCGGAAACAGAGAAGCACCAACTACCACTCTTCCATGAGTGCAAGAGCTGCAGCAAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006873 GO:0006874 GO:0006875 GO:0007204 GO:0008150 GO:0008285 GO:0009966 GO:0009967 GO:0009987 GO:0010646 GO:0010647 GO:0012505 GO:0016020 GO:0016528 GO:0016529 GO:0019725 GO:0023051 GO:0023056 GO:0030001 GO:0030003 GO:0031090 GO:0031984 GO:0032879 GO:0033017 GO:0034220 GO:0042127 GO:0042175 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044325 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0048471 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050848 GO:0050850 GO:0051179 GO:0051209 GO:0051234 GO:0051282 GO:0051283 GO:0051480 GO:0051641 GO:0051649 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055085 GO:0060401 GO:0060402 GO:0065007 GO:0065008 GO:0070588 GO:0070838 GO:0070884 GO:0070886 GO:0072503 GO:0072507 GO:0072511 GO:0097553 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:0098827 GO:0106056 GO:0106058 GO:1902531 GO:1902533

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

CTD_bind Surp

Protein Analysis

644

Amino Acids

70.74

Weight (kDa)

5.95

Isoelectric Point (pI)

61.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Surp	PF01805	114 - 162	1.4e-14	Surp module
CID	PF04818	245 - 368	4.6e-21	CID domain
SWAP1_C	PF25123	484 - 644	2e-89	SUPPRESSOR-OF-WHITE-APRICOT-like, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009244)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31200 AT4G31200 AT4G31200
fragaria_vesca	FvH4_2g36600
malus_domestica	MD08G1126000.v1.1 MD15G1105800.v1.1
prunus_persica	Prupe.1G457600_v2.0.a1 Prupe.1G457600_v2.0.a1 Prupe.1G457600_v2.0.a1
pyrus_communis	pycom08g10510 pycom15g09600 pycom15g09640
rosa_chinensis	RchiOBHm_Chr6g0305221
rosa_laevigata	RLG00000010907
rosa_multiflora	Rmu_co8150504.1_g000001
rosa_roxburghii	Rroxscaffold_7G00163030
rosa_rugosa	Rorug06G0338700
rosa_samantha	Rh6AG450400 Rh6BG451000 Rh6CG464300 Rh6DG451000
rosa_wichuraiana	Rw6G039250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	356, 769
Acc36I	ACCTGC	2 cut(s)	1735, 1749
Acc65I	GGTACC	1 cut(s)	93
AccB1I	GGYRCC	3 cut(s)	93, 1288, 1516
AccB7I	CCANNNNNTGG	1 cut(s)	792
AccI	GTMKAC	1 cut(s)	1749
AccII	CGCG	2 cut(s)	215, 405
AclWI	GGATC	3 cut(s)	12, 353, 860
AcsI	RAATTY	3 cut(s)	1050, 1324, 1587
AcuI	CTGAAG	1 cut(s)	1662
AfaI	GTAC	6 cut(s)	95, 365, 1575, 1685, 1696, 1853
AflIII	ACRYGT	2 cut(s)	883, 1267
AgsI	TTSAA	4 cut(s)	508, 1179, 1379, 1615
AjnI	CCWGG	7 cut(s)	102, 198, 669, 1147, 1276, 1414, 1468
Alw21I	GWGCWC	1 cut(s)	336
Alw26I	GTCTC	2 cut(s)	1665, 1751
AlwI	GGATC	3 cut(s)	12, 353, 860
Ama87I	CYCGRG	3 cut(s)	492, 1801, 1817
ApaI	GGGCCC	2 cut(s)	573, 1356
ApoI	RAATTY	3 cut(s)	1050, 1324, 1587
ArsI	GACNNNNNNTTYG	2 cut(s)	896, 928
Asp718I	GGTACC	1 cut(s)	93
AspLEI	GCGC	2 cut(s)	217, 682
AsuC2I	CCSGG	2 cut(s)	254, 329
AsuHPI	GGTGA	5 cut(s)	221, 227, 950, 1518, 1855
AsuII	TTCGAA	1 cut(s)	390
AvaI	CYCGRG	3 cut(s)	492, 1801, 1817
AvaII	GGWCC	7 cut(s)	134, 314, 380, 657, 762, 1127, 1646
BaeGI	GKGCMC	2 cut(s)	573, 1356
BanI	GGYRCC	3 cut(s)	93, 1288, 1516
BanII	GRGCYC	3 cut(s)	336, 573, 1356
BbsI	GAAGAC	2 cut(s)	1032, 1145
Bbv12I	GWGCWC	1 cut(s)	336
BbvCI	CCTCAGC	1 cut(s)	831
BccI	CCATC	8 cut(s)	580, 1138, 1375, 1480, 1562, 1573, 1658, 1769
BceAI	ACGGC	2 cut(s)	136, 475
BcgI	CGANNNNNNTGC	2 cut(s)	944, 978
BciT130I	CCWGG	7 cut(s)	104, 200, 671, 1149, 1278, 1416, 1470
BciVI	GTATCC	1 cut(s)	1084
BclI	TGATCA	1 cut(s)	1084
BcnI	CCSGG	2 cut(s)	254, 329
BcoDI	GTCTC	2 cut(s)	1665, 1751
BfmI	CTRYAG	2 cut(s)	1742, 1923
BfuAI	ACCTGC	2 cut(s)	1735, 1749
BfuI	GTATCC	1 cut(s)	1084
BglI	GCCNNNNNGGC	2 cut(s)	1207, 1219
BlpI	GCTNAGC	1 cut(s)	734
BmcAI	AGTACT	2 cut(s)	365, 1696
Bme1390I	CCNGG	9 cut(s)	104, 200, 254, 329, 671, 1149, 1278, 1416, 1470
Bme18I	GGWCC	7 cut(s)	134, 314, 380, 657, 762, 1127, 1646
BmeT110I	CYCGRG	3 cut(s)	492, 1801, 1817
BmrFI	CCNGG	9 cut(s)	104, 200, 254, 329, 671, 1149, 1278, 1416, 1470
BmsI	GCATC	4 cut(s)	1090, 1264, 1488, 1731
BpiI	GAAGAC	2 cut(s)	1032, 1145
BpmI	CTGGAG	1 cut(s)	137
Bpu10I	CCTNAGC	1 cut(s)	831
Bpu1102I	GCTNAGC	1 cut(s)	734
Bpu14I	TTCGAA	1 cut(s)	390
BpuEI	CTTGAG	1 cut(s)	1613
BpuMI	CCSGG	2 cut(s)	254, 329
BsaJI	CCNNGG	4 cut(s)	102, 198, 252, 457
BsaWI	WCCGGW	2 cut(s)	304, 1875
Bse118I	RCCGGY	2 cut(s)	290, 311
Bse1I	ACTGG	2 cut(s)	940, 1849
Bse3DI	GCAATG	2 cut(s)	732, 745
BseBI	CCWGG	7 cut(s)	104, 200, 671, 1149, 1278, 1416, 1470
BseDI	CCNNGG	4 cut(s)	102, 198, 252, 457
BseGI	GGATG	2 cut(s)	1565, 1722
BseMI	GCAATG	2 cut(s)	732, 745
BseMII	CTCAG	5 cut(s)	725, 822, 861, 1473, 1592
BseNI	ACTGG	2 cut(s)	940, 1849
BseRI	GAGGAG	3 cut(s)	288, 291, 1728
BseSI	GKGCMC	2 cut(s)	573, 1356
BseYI	CCCAGC	2 cut(s)	1308, 1349
Bsh1236I	CGCG	2 cut(s)	215, 405
Bsh1285I	CGRYCG	1 cut(s)	309
BshNI	GGYRCC	3 cut(s)	93, 1288, 1516
BsiEI	CGRYCG	1 cut(s)	309
BsiHKAI	GWGCWC	1 cut(s)	336
BsiHKCI	CYCGRG	3 cut(s)	492, 1801, 1817
BsiSI	CCGG	8 cut(s)	254, 291, 305, 312, 329, 821, 1700, 1876
BslFI	GGGAC	4 cut(s)	257, 775, 1316, 1827
BsmAI	GTCTC	2 cut(s)	1665, 1751
BsmBI	CGTCTC	2 cut(s)	1665, 1751
BsmFI	GGGAC	4 cut(s)	257, 775, 1316, 1827
BsoBI	CYCGRG	3 cut(s)	492, 1801, 1817
Bsp119I	TTCGAA	1 cut(s)	390
Bsp120I	GGGCCC	2 cut(s)	569, 1352
Bsp1286I	GDGCHC	3 cut(s)	336, 573, 1356
Bsp143I	GATC	6 cut(s)	4, 345, 865, 1084, 1246, 1786
Bsp1720I	GCTNAGC	1 cut(s)	734
Bsp68I	TCGCGA	1 cut(s)	405
BspCNI	CTCAG	5 cut(s)	726, 823, 862, 1474, 1591
BspFNI	CGCG	2 cut(s)	215, 405
BspMAI	CTGCAG	2 cut(s)	1746, 1927
BspMI	ACCTGC	2 cut(s)	1735, 1749
BspPI	GGATC	3 cut(s)	12, 353, 860
BspT104I	TTCGAA	1 cut(s)	390
BspT107I	GGYRCC	3 cut(s)	93, 1288, 1516
BsrDI	GCAATG	2 cut(s)	732, 745
BsrFI	RCCGGY	2 cut(s)	290, 311
BsrI	ACTGG	2 cut(s)	940, 1849
BssAI	RCCGGY	2 cut(s)	290, 311
BssECI	CCNNGG	4 cut(s)	102, 198, 252, 457
BssMI	GATC	6 cut(s)	4, 345, 865, 1084, 1246, 1786
Bst2UI	CCWGG	7 cut(s)	104, 200, 671, 1149, 1278, 1416, 1470
Bst4CI	ACNGT	3 cut(s)	114, 470, 1573
Bst6I	CTCTTC	2 cut(s)	446, 1909
BstAPI	GCANNNNNTGC	2 cut(s)	1054, 1922
BstBI	TTCGAA	1 cut(s)	390
BstC8I	GCNNGC	6 cut(s)	12, 292, 596, 993, 1705, 1720
BstDEI	CTNAG	8 cut(s)	734, 831, 839, 870, 979, 1165, 1482, 1578
BstDSI	CCRYGG	1 cut(s)	457
BstENI	CCTNNNNNAGG	2 cut(s)	978, 1641
BstF5I	GGATG	2 cut(s)	1565, 1722
BstFNI	CGCG	2 cut(s)	215, 405
BstHHI	GCGC	2 cut(s)	217, 682
BstKTI	GATC	6 cut(s)	7, 348, 868, 1087, 1249, 1789
BstMAI	GTCTC	2 cut(s)	1665, 1751
BstMBI	GATC	6 cut(s)	4, 345, 865, 1084, 1246, 1786
BstMCI	CGRYCG	1 cut(s)	309
BstNI	CCWGG	7 cut(s)	104, 200, 671, 1149, 1278, 1416, 1470
BstNSI	RCATGY	3 cut(s)	538, 887, 1271
BstSCI	CCNGG	9 cut(s)	102, 198, 252, 327, 669, 1147, 1276, 1414, 1468
BstSFI	CTRYAG	2 cut(s)	1742, 1923
BstSLI	GKGCMC	2 cut(s)	573, 1356
BstUI	CGCG	2 cut(s)	215, 405
BstV2I	GAAGAC	2 cut(s)	1032, 1145
BsuI	GTATCC	1 cut(s)	1084
BtgI	CCRYGG	1 cut(s)	457
BtsCI	GGATG	2 cut(s)	1565, 1722
BtsI	GCAGTG	1 cut(s)	1516
BtsIMutI	CAGTG	2 cut(s)	1516, 1569
BtuMI	TCGCGA	1 cut(s)	405
BveI	ACCTGC	2 cut(s)	1735, 1749
Cac8I	GCNNGC	6 cut(s)	12, 292, 596, 993, 1705, 1720
CfoI	GCGC	2 cut(s)	217, 682
Cfr10I	RCCGGY	2 cut(s)	290, 311
CseI	GACGC	1 cut(s)	760
CsiI	ACCWGGT	1 cut(s)	1468
Csp6I	GTAC	6 cut(s)	94, 364, 1574, 1684, 1695, 1852
CspCI	CAANNNNNGTGG	2 cut(s)	1392, 1427
CviAII	CATG	7 cut(s)	397, 535, 884, 988, 1268, 1655, 1909
CviQI	GTAC	6 cut(s)	94, 364, 1574, 1684, 1695, 1852
DdeI	CTNAG	8 cut(s)	734, 831, 839, 870, 979, 1165, 1482, 1578
DpnI	GATC	6 cut(s)	6, 347, 867, 1086, 1248, 1788
DpnII	GATC	6 cut(s)	4, 345, 865, 1084, 1246, 1786
DraI	TTTAAA	1 cut(s)	691
DrdI	GACNNNNNNGTC	2 cut(s)	356, 769
DseDI	GACNNNNNNGTC	2 cut(s)	356, 769
Eam1104I	CTCTTC	2 cut(s)	446, 1909
EarI	CTCTTC	2 cut(s)	446, 1909
EciI	GGCGGA	2 cut(s)	358, 537
Ecl136II	GAGCTC	1 cut(s)	334
Eco147I	AGGCCT	1 cut(s)	945
Eco24I	GRGCYC	3 cut(s)	336, 573, 1356
Eco47I	GGWCC	7 cut(s)	134, 314, 380, 657, 762, 1127, 1646
Eco53kI	GAGCTC	1 cut(s)	334
Eco57I	CTGAAG	1 cut(s)	1662
Eco88I	CYCGRG	3 cut(s)	492, 1801, 1817
EcoICRI	GAGCTC	1 cut(s)	334
EcoNI	CCTNNNNNAGG	2 cut(s)	978, 1641
EcoO109I	RGGNCCY	3 cut(s)	570, 1353, 1646
EcoRII	CCWGG	7 cut(s)	102, 198, 669, 1147, 1276, 1414, 1468
EcoT22I	ATGCAT	1 cut(s)	1105
EcoT38I	GRGCYC	3 cut(s)	336, 573, 1356
Esp3I	CGTCTC	2 cut(s)	1665, 1751
FaeI	CATG	7 cut(s)	400, 538, 887, 991, 1271, 1658, 1912
FalI	AAGNNNNNCTT	4 cut(s)	1126, 1158, 1242, 1274
FaqI	GGGAC	4 cut(s)	257, 775, 1316, 1827
FatI	CATG	7 cut(s)	396, 534, 883, 987, 1267, 1654, 1908
FauI	CCCGC	4 cut(s)	105, 153, 285, 603
FbaI	TGATCA	1 cut(s)	1084
FblI	GTMKAC	1 cut(s)	1749
FokI	GGATG	2 cut(s)	1552, 1709
FriOI	GRGCYC	3 cut(s)	336, 573, 1356
GlaI	GCGC	2 cut(s)	216, 681
GsaI	CCCAGC	2 cut(s)	1312, 1353
GsuI	CTGGAG	1 cut(s)	137
HapII	CCGG	8 cut(s)	254, 291, 305, 312, 329, 821, 1700, 1876
HgaI	GACGC	1 cut(s)	760
HhaI	GCGC	2 cut(s)	217, 682
Hin1II	CATG	7 cut(s)	400, 538, 887, 991, 1271, 1658, 1912
Hin6I	GCGC	2 cut(s)	215, 680
HinP1I	GCGC	2 cut(s)	215, 680
HincII	GTYRAC	1 cut(s)	1633
HindII	GTYRAC	1 cut(s)	1633
HinfI	GANTC	8 cut(s)	400, 514, 553, 770, 956, 1184, 1534, 1815
HpaI	GTTAAC	1 cut(s)	1633
HpaII	CCGG	8 cut(s)	254, 291, 305, 312, 329, 821, 1700, 1876
HphI	GGTGA	5 cut(s)	221, 227, 950, 1518, 1855
Hpy166II	GTNNAC	4 cut(s)	1127, 1241, 1633, 1750
Hpy8I	GTNNAC	4 cut(s)	1127, 1241, 1633, 1750
Hpy99I	CGWCG	3 cut(s)	362, 933, 1859
HpyAV	CCTTC	5 cut(s)	268, 446, 935, 1637, 1647
HpyCH4III	ACNGT	3 cut(s)	114, 470, 1573
HpyF3I	CTNAG	8 cut(s)	734, 831, 839, 870, 979, 1165, 1482, 1578
Hsp92II	CATG	7 cut(s)	400, 538, 887, 991, 1271, 1658, 1912
HspAI	GCGC	2 cut(s)	215, 680
KpnI	GGTACC	1 cut(s)	97
KroI	GCCGGC	1 cut(s)	290
KroNI	GCCGGC	1 cut(s)	292
Ksp22I	TGATCA	1 cut(s)	1084
KspAI	GTTAAC	1 cut(s)	1633
Kzo9I	GATC	6 cut(s)	4, 345, 865, 1084, 1246, 1786
LmnI	GCTCC	8 cut(s)	331, 339, 532, 730, 782, 823, 1279, 1715
LweI	GCATC	4 cut(s)	1090, 1264, 1488, 1731
MabI	ACCWGGT	1 cut(s)	1468
MaeIII	GTNAC	1 cut(s)	470
MalI	GATC	6 cut(s)	6, 347, 867, 1086, 1248, 1788
MboI	GATC	6 cut(s)	4, 345, 865, 1084, 1246, 1786
MboII	GAAGA	8 cut(s)	433, 1037, 1145, 1310, 1362, 1603, 1860, 1896
MfeI	CAATTG	1 cut(s)	1095
MhlI	GDGCHC	3 cut(s)	336, 573, 1356
MluCI	AATT	8 cut(s)	86, 158, 1050, 1095, 1138, 1313, 1324, 1587
MlyI	GAGTC	3 cut(s)	779, 1543, 1809
MmeI	TCCRAC	2 cut(s)	348, 1574
Mph1103I	ATGCAT	1 cut(s)	1105
MroNI	GCCGGC	1 cut(s)	290
MseI	TTAA	3 cut(s)	690, 777, 1632
MspA1I	CMGCKG	3 cut(s)	622, 709, 1434
MspI	CCGG	8 cut(s)	254, 291, 305, 312, 329, 821, 1700, 1876
MspR9I	CCNGG	9 cut(s)	104, 200, 254, 329, 671, 1149, 1278, 1416, 1470
MunI	CAATTG	1 cut(s)	1095
MvaI	CCWGG	7 cut(s)	104, 200, 671, 1149, 1278, 1416, 1470
MvnI	CGCG	2 cut(s)	215, 405
NaeI	GCCGGC	1 cut(s)	292
NciI	CCSGG	2 cut(s)	254, 329
NdeII	GATC	6 cut(s)	4, 345, 865, 1084, 1246, 1786
NgoMIV	GCCGGC	1 cut(s)	290
NlaIII	CATG	7 cut(s)	400, 538, 887, 991, 1271, 1658, 1912
NruI	TCGCGA	1 cut(s)	405
NsiI	ATGCAT	1 cut(s)	1105
NspI	RCATGY	3 cut(s)	538, 887, 1271
NspV	TTCGAA	1 cut(s)	390
PceI	AGGCCT	1 cut(s)	945
PciI	ACATGT	2 cut(s)	883, 1267
PcsI	WCGNNNNNNNCGW	3 cut(s)	267, 354, 509
PdiI	GCCGGC	1 cut(s)	292
PfeI	GAWTC	5 cut(s)	400, 514, 553, 956, 1184
PflFI	GACNNNGTC	1 cut(s)	1859
PflMI	CCANNNNNTGG	1 cut(s)	792
PleI	GAGTC	3 cut(s)	778, 1542, 1809
PpsI	GAGTC	3 cut(s)	778, 1542, 1809
PpuMI	RGGWCCY	1 cut(s)	1646
PscI	ACATGT	2 cut(s)	883, 1267
Psp124BI	GAGCTC	1 cut(s)	336
Psp5II	RGGWCCY	1 cut(s)	1646
Psp6I	CCWGG	7 cut(s)	102, 198, 669, 1147, 1276, 1414, 1468
PspFI	CCCAGC	2 cut(s)	1308, 1349
PspGI	CCWGG	7 cut(s)	102, 198, 669, 1147, 1276, 1414, 1468
PspOMI	GGGCCC	2 cut(s)	569, 1352
PspPPI	RGGWCCY	1 cut(s)	1646
PstI	CTGCAG	2 cut(s)	1746, 1927
PsyI	GACNNNGTC	1 cut(s)	1859
RruI	TCGCGA	1 cut(s)	405
RsaI	GTAC	6 cut(s)	95, 365, 1575, 1685, 1696, 1853
RsaNI	GTAC	6 cut(s)	94, 364, 1574, 1684, 1695, 1852
SacI	GAGCTC	1 cut(s)	336
SaqAI	TTAA	3 cut(s)	690, 777, 1632
Sau3AI	GATC	6 cut(s)	4, 345, 865, 1084, 1246, 1786
SbfI	CCTGCAGG	1 cut(s)	1746
ScaI	AGTACT	2 cut(s)	365, 1696
SchI	GAGTC	3 cut(s)	779, 1543, 1809
ScrFI	CCNGG	9 cut(s)	104, 200, 254, 329, 671, 1149, 1278, 1416, 1470
SdaI	CCTGCAGG	1 cut(s)	1746
SduI	GDGCHC	3 cut(s)	336, 573, 1356
SexAI	ACCWGGT	1 cut(s)	1468
SfaNI	GCATC	4 cut(s)	1090, 1264, 1488, 1731
SfcI	CTRYAG	2 cut(s)	1742, 1923
SfuI	TTCGAA	1 cut(s)	390
SinI	GGWCC	7 cut(s)	134, 314, 380, 657, 762, 1127, 1646
SmlI	CTYRAG	1 cut(s)	1592
SmoI	CTYRAG	1 cut(s)	1592
Sse8387I	CCTGCAGG	1 cut(s)	1746
Sse9I	AATT	8 cut(s)	86, 158, 1050, 1095, 1138, 1313, 1324, 1587
SseBI	AGGCCT	1 cut(s)	945
SstI	GAGCTC	1 cut(s)	336
StuI	AGGCCT	1 cut(s)	945
StyD4I	CCNGG	9 cut(s)	102, 198, 252, 327, 669, 1147, 1276, 1414, 1468
TaaI	ACNGT	3 cut(s)	114, 470, 1573
TaqI	TCGA	8 cut(s)	348, 360, 390, 773, 915, 931, 1235, 1789
TasI	AATT	8 cut(s)	86, 158, 1050, 1095, 1138, 1313, 1324, 1587
TatI	WGTACW	2 cut(s)	363, 1694
TfiI	GAWTC	5 cut(s)	400, 514, 553, 956, 1184
Tru1I	TTAA	3 cut(s)	690, 777, 1632
Tru9I	TTAA	3 cut(s)	690, 777, 1632
TscAI	CASTG	2 cut(s)	1516, 1576
TspDTI	ATGAA	3 cut(s)	578, 1052, 1643
TspGWI	ACGGA	4 cut(s)	358, 393, 1037, 1288
TspRI	CASTG	2 cut(s)	1516, 1576
Tth111I	GACNNNGTC	1 cut(s)	1859
Van91I	CCANNNNNTGG	1 cut(s)	792
VpaK11BI	GGWCC	7 cut(s)	134, 314, 380, 657, 762, 1127, 1646
XagI	CCTNNNNNAGG	2 cut(s)	978, 1641
XapI	RAATTY	3 cut(s)	1050, 1324, 1587
XceI	RCATGY	3 cut(s)	538, 887, 1271
XmiI	GTMKAC	1 cut(s)	1749
ZrmI	AGTACT	2 cut(s)	365, 1696
Zsp2I	ATGCAT	1 cut(s)	1105

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.