Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0009244

Physical Location & Seq

Genomic Coordinates Forward (+)

8762582 .. 8765627

Gene Structure 3046 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g10510.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2028 bp

ATGGATCGGCAGCCTCACGACTACGCCGCCTCCGCCATGGCCTACGCCCAACAACAGCGCCAAGCAGCCACCAGCCTTCAACAGCAGCAGCAGCCACAACAACCGCCCCAACAGCAGCAATTCGGGTACCCGCCCCAAACCCAACAGTTCCATGGAGGCCCACCACAGTTCGTGGGTCCCCACCCTTCTCTGCAGCAACAATTCCCTTACCATCCCCACGGGCCGCCGCAAGTCCTTCCCCACGCCCCGCCTCACCCCCACCACCTCCCTCCTCCGTCCTTCGCTCCCCACCTTCCCCCTCCATTGGTTCCCTCCCCCTTCCACACAGGGCCCACCTACGACTCTCCCCAGCCTCCGCCGTCTGCTCCTCCGTCCGACCCGGAGCTCCACAAACGGATCGATAAGCTTGTAGAGTACTCCGCCAAGAACGGCCCGGAGTTCGAAGCCATGATCCGGGACAAGCAGCAGGATAATCCCGAGTACGCTTTCTTGTTCGGCGGCGAAGGCCATGGCTATTACCGCTACAAGCTCTGGATATCGACCCGGGCTCCAGGCGGATCTTTCAACCCAGCTGGATTCCCACCCGGGTCGATGCACATGCTGCGCCCGCCCCCAAACCCCATGATGAACGCGCCTCCATCTGCGGCAATGATGGGCGGGCCTCCGCCGCCTTATTTTTACGAGCAGCAGCGACACGGGCAGTCGTTCGGAGTGTACGGGCGGACAGAGTACGACCAGTCTCCATCCAAGCCCTTCAAAGGGCTCTCGGGACCGCTTCCCTCTGAGGTTGCAGTGGAGCTTAACAATGTGCTTATGACGCTGAATGGGACCAAAGAGTCGATTAAGGGAGCGAAATTTTGGTTTATGCAGCGGTCAAGATTTGCGCCGGCATTGGCTGAGGCTCTTCGGGAGAGGGTGTTTGGCTTGGATGATTCTGAGAGGCAGCTTCATGTGATATACCTTGCAAATGATATTTTGTTTGACAGCTCGCATCGGCGGACTGTTGAAGGCCTTGATAATGAATCACTTGCTTTCAAACCTATCTTAGGTTCCATGCTTGCAAGGATTTATCATAACCCTCAAATCACAGAAGACAATCAATTGAAGTTGCAGCAAATTTTACAGTTATGGGCTTCTAAGAACATTTATGATCAGGATACTATTGATACATTTAGGAATGAGATGCTTGGTGGACCATCAAGTAATACTTTTACGGGGATTCCAAAAGACTTATCCACTGCTTCAGCAGAATCAGCAGCAGGATTGCCACCACAGACAACAAACCACAATGCATTTCAATGGCAGACGGATAGGCAAAGTTCTGTATCCAGTTCACTTGATCAAGATCACCTTGATAAACATGCAGTTCCTGGCCAAGGCATGCCTCTCTCTATGCCTTCCCAGCAATTTCTTCCGAATTCAGTCCCTCCTGTTGCTTTTCCCGGGTCCATGCCCATAACATCTTCCGTTCTACCAGCAAACCAACAACCCCCACCCCATTTACTGCCAGGCCAACCTGCTAGTGGTGGGGAGAAGTTGACACCATATCCGTTGTTCCCACCTGGTCTTATTCCTGAGATGGTCAGAAAGATGCAGATTGGCAGTGGTGTGCCATACTCGCAGATGAGCCCTTTGGACATTCCAACTGTTATACCTCCATCCACTGTACCTCAGTCAGAAATTCTCGATAGAGTGTCGAAATTCTTCAAGGAGATTGGAGAAGTTAACCCTTCTGAAGGGCCCCTTCATAATTCAGATGGCAGGGACGAGGATGATTACGAAGGAGAGCCTGTGGCGCGCAAGGGTGGAGCTTGCATCCCTCCACCCCCAAACCTGCAGATAGACCCTGAGACGGGGGCTTATGCTGATGGAAGTGTAGATAGAAAGAGTGGGTCGGGAAGGTTGGGACTAGGGGCCACAGCTAATCCAAATGAGGCAAGCCAGTACGATGATGTTTATTCTTCTTACAGGAAACAAAGAAGCACCAACTACCACTCATCCATGAGTGCACGAGCTTCAGCGAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006873 GO:0006874 GO:0006875 GO:0007204 GO:0008150 GO:0008285 GO:0009966 GO:0009967 GO:0009987 GO:0010646 GO:0010647 GO:0012505 GO:0016020 GO:0016528 GO:0016529 GO:0019725 GO:0023051 GO:0023056 GO:0030001 GO:0030003 GO:0031090 GO:0031984 GO:0032879 GO:0033017 GO:0034220 GO:0042127 GO:0042175 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044325 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0048471 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050848 GO:0050850 GO:0051179 GO:0051209 GO:0051234 GO:0051282 GO:0051283 GO:0051480 GO:0051641 GO:0051649 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055085 GO:0060401 GO:0060402 GO:0065007 GO:0065008 GO:0070588 GO:0070838 GO:0070884 GO:0070886 GO:0072503 GO:0072507 GO:0072511 GO:0097553 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:0098827 GO:0106056 GO:0106058 GO:1902531 GO:1902533

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

CTD_bind Surp

Protein Analysis

676

Amino Acids

74.1

Weight (kDa)

6.05

Isoelectric Point (pI)

68.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Surp	PF01805	131 - 178	9.3e-15	Surp module
CID	PF04818	267 - 390	9.6e-23	CID domain
SWAP1_C	PF25123	515 - 675	8.7e-89	SUPPRESSOR-OF-WHITE-APRICOT-like, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009244)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31200 AT4G31200 AT4G31200
fragaria_vesca	FvH4_2g36600
malus_domestica	MD08G1126000.v1.1 MD15G1105800.v1.1
prunus_persica	Prupe.1G457600_v2.0.a1 Prupe.1G457600_v2.0.a1 Prupe.1G457600_v2.0.a1
pyrus_communis	pycom08g10510 pycom15g09600 pycom15g09640
rosa_chinensis	RchiOBHm_Chr6g0305221
rosa_laevigata	RLG00000010907
rosa_multiflora	Rmu_co8150504.1_g000001
rosa_roxburghii	Rroxscaffold_7G00163030
rosa_rugosa	Rorug06G0338700
rosa_samantha	Rh6AG450400 Rh6BG451000 Rh6CG464300 Rh6DG451000
rosa_wichuraiana	Rw6G039250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	835
Acc36I	ACCTGC	2 cut(s)	1525, 1842
Acc65I	GGTACC	1 cut(s)	126
AccB1I	GGYRCC	1 cut(s)	126
AccII	CGCG	2 cut(s)	632, 1798
AclWI	GGATC	4 cut(s)	12, 404, 445, 565
AcoI	YGGCCR	1 cut(s)	1372
AcsI	RAATTY	5 cut(s)	854, 1116, 1417, 1680, 1700
AcuI	CTGAAG	3 cut(s)	1227, 1755, 2001
AfaI	GTAC	7 cut(s)	128, 416, 482, 716, 731, 1668, 1946
AgsI	TTSAA	8 cut(s)	80, 565, 757, 1007, 1036, 1105, 1298, 1708
AjnI	CCWGG	4 cut(s)	550, 1369, 1507, 1561
Alw21I	GWGCWC	2 cut(s)	387, 2011
Alw26I	GTCTC	2 cut(s)	744, 1844
Alw44I	GTGCAC	1 cut(s)	2007
AlwI	GGATC	4 cut(s)	12, 404, 445, 565
AlwNI	CAGNNNCTG	1 cut(s)	1370
Ama87I	CYCGRG	5 cut(s)	476, 543, 584, 766, 1442
ApaI	GGGCCC	2 cut(s)	333, 1743
ApaLI	GTGCAC	1 cut(s)	2007
ApoI	RAATTY	5 cut(s)	854, 1116, 1417, 1680, 1700
Asp700I	GAANNNNTTC	1 cut(s)	1703
Asp718I	GGTACC	1 cut(s)	126
AspLEI	GCGC	6 cut(s)	60, 606, 634, 886, 1798, 1800
AsuC2I	CCSGG	9 cut(s)	380, 434, 455, 544, 545, 585, 586, 1443, 1444
AsuHPI	GGTGA	2 cut(s)	245, 1340
AsuII	TTCGAA	1 cut(s)	441
AvaI	CYCGRG	5 cut(s)	476, 543, 584, 766, 1442
AvaII	GGWCC	5 cut(s)	176, 770, 828, 1193, 1446
BaeGI	GKGCMC	3 cut(s)	333, 1743, 2011
BalI	TGGCCA	1 cut(s)	1374
BanI	GGYRCC	1 cut(s)	126
BanII	GRGCYC	6 cut(s)	333, 387, 550, 765, 1631, 1743
BauI	CACGAG	1 cut(s)	2010
BbsI	GAAGAC	1 cut(s)	1098
Bbv12I	GWGCWC	2 cut(s)	387, 2011
BbvCI	CCTCAGC	1 cut(s)	897
BccI	CCATC	9 cut(s)	219, 646, 646, 751, 1204, 1573, 1666, 1751, 1862
BceAI	ACGGC	2 cut(s)	343, 445
BcgI	CGANNNNNNTGC	2 cut(s)	580, 614
BciT130I	CCWGG	4 cut(s)	552, 1371, 1509, 1563
BciVI	GTATCC	2 cut(s)	1150, 1336
BclI	TGATCA	2 cut(s)	1150, 1339
BcnI	CCSGG	9 cut(s)	380, 434, 455, 544, 545, 585, 586, 1443, 1444
BcoDI	GTCTC	2 cut(s)	744, 1844
BfaI	CTAG	2 cut(s)	1521, 1910
BfmI	CTRYAG	2 cut(s)	191, 1835
BfoI	RGCGCY	1 cut(s)	61
BfuAI	ACCTGC	2 cut(s)	1525, 1842
BfuI	GTATCC	2 cut(s)	1150, 1336
BmcAI	AGTACT	1 cut(s)	416
Bme18I	GGWCC	5 cut(s)	176, 770, 828, 1193, 1446
BmeT110I	CYCGRG	5 cut(s)	476, 543, 584, 766, 1442
BmsI	GCATC	5 cut(s)	582, 1000, 1173, 1581, 1824
BpiI	GAAGAC	1 cut(s)	1098
BpmI	CTGGAG	1 cut(s)	534
Bpu10I	CCTNAGC	1 cut(s)	897
Bpu14I	TTCGAA	1 cut(s)	441
BpuMI	CCSGG	9 cut(s)	380, 434, 455, 544, 545, 585, 586, 1443, 1444
Bsa29I	ATCGAT	1 cut(s)	399
BsaBI	GATNNNNATC	1 cut(s)	1344
BsaJI	CCNNGG	8 cut(s)	36, 151, 217, 508, 543, 584, 1375, 1442
BsaXI	ACNNNNNCTCC	8 cut(s)	14, 44, 532, 562, 902, 932, 1776, 1806
Bse118I	RCCGGY	1 cut(s)	886
Bse1I	ACTGG	3 cut(s)	736, 1329, 1942
Bse3DI	GCAATG	1 cut(s)	654
Bse8I	GATNNNNATC	1 cut(s)	1344
BseBI	CCWGG	4 cut(s)	552, 1371, 1509, 1563
BseCI	ATCGAT	1 cut(s)	399
BseDI	CCNNGG	8 cut(s)	36, 151, 217, 508, 543, 584, 1375, 1442
BseGI	GGATG	7 cut(s)	211, 743, 934, 1658, 1777, 1815, 1997
BseJI	GATNNNNATC	1 cut(s)	1344
BseMI	GCAATG	1 cut(s)	654
BseMII	CTCAG	6 cut(s)	774, 888, 927, 1566, 1685, 1839
BseNI	ACTGG	3 cut(s)	736, 1329, 1942
BsePI	GCGCGC	1 cut(s)	1796
BseRI	GAGGAG	2 cut(s)	261, 357
BseSI	GKGCMC	3 cut(s)	333, 1743, 2011
BseYI	CCCAGC	3 cut(s)	348, 568, 1401
Bsh1236I	CGCG	2 cut(s)	632, 1798
BshNI	GGYRCC	1 cut(s)	126
BshVI	ATCGAT	1 cut(s)	399
BsiHKAI	GWGCWC	2 cut(s)	387, 2011
BsiHKCI	CYCGRG	5 cut(s)	476, 543, 584, 766, 1442
BsiSI	CCGG	7 cut(s)	380, 434, 454, 544, 585, 887, 1443
BslFI	GGGAC	7 cut(s)	162, 470, 783, 841, 1409, 1778, 1920
BsmAI	GTCTC	2 cut(s)	744, 1844
BsmBI	CGTCTC	1 cut(s)	1844
BsmFI	GGGAC	7 cut(s)	162, 470, 783, 841, 1409, 1778, 1920
BsoBI	CYCGRG	5 cut(s)	476, 543, 584, 766, 1442
Bsp119I	TTCGAA	1 cut(s)	441
Bsp120I	GGGCCC	2 cut(s)	329, 1739
Bsp1286I	GDGCHC	7 cut(s)	333, 387, 550, 765, 1631, 1743, 2011
Bsp143I	GATC	7 cut(s)	4, 396, 450, 557, 1150, 1339, 1345
Bsp19I	CCATGG	3 cut(s)	36, 151, 508
BspCNI	CTCAG	6 cut(s)	775, 889, 928, 1567, 1684, 1840
BspDI	ATCGAT	1 cut(s)	399
BspFNI	CGCG	2 cut(s)	632, 1798
BspMAI	CTGCAG	2 cut(s)	195, 1839
BspMI	ACCTGC	2 cut(s)	1525, 1842
BspPI	GGATC	4 cut(s)	12, 404, 445, 565
BspQI	GCTCTTC	1 cut(s)	909
BspT104I	TTCGAA	1 cut(s)	441
BspT107I	GGYRCC	1 cut(s)	126
BsrDI	GCAATG	1 cut(s)	654
BsrFI	RCCGGY	1 cut(s)	886
BsrI	ACTGG	3 cut(s)	736, 1329, 1942
BssAI	RCCGGY	1 cut(s)	886
BssECI	CCNNGG	8 cut(s)	36, 151, 217, 508, 543, 584, 1375, 1442
BssHII	GCGCGC	1 cut(s)	1796
BssMI	GATC	7 cut(s)	4, 396, 450, 557, 1150, 1339, 1345
BssSI	CACGAG	1 cut(s)	2010
BssT1I	CCWWGG	4 cut(s)	36, 151, 508, 1375
Bst2BI	CACGAG	1 cut(s)	2010
Bst2UI	CCWGG	4 cut(s)	552, 1371, 1509, 1563
Bst4CI	ACNGT	6 cut(s)	147, 168, 1003, 1125, 1648, 1666
Bst6I	CTCTTC	1 cut(s)	909
BstAPI	GCANNNNNTGC	1 cut(s)	601
BstBI	TTCGAA	1 cut(s)	441
BstC8I	GCNNGC	9 cut(s)	608, 659, 888, 989, 1059, 1382, 1798, 1813, 1939
BstDEI	CTNAG	8 cut(s)	783, 897, 936, 1045, 1137, 1575, 1671, 1848
BstDSI	CCRYGG	4 cut(s)	36, 151, 217, 508
BstENI	CCTNNNNNAGG	3 cut(s)	1044, 1374, 1734
BstF5I	GGATG	7 cut(s)	211, 743, 934, 1658, 1777, 1815, 1997
BstFNI	CGCG	2 cut(s)	632, 1798
BstH2I	RGCGCY	1 cut(s)	61
BstHHI	GCGC	6 cut(s)	60, 606, 634, 886, 1798, 1800
BstKTI	GATC	7 cut(s)	7, 399, 453, 560, 1153, 1342, 1348
BstMAI	GTCTC	2 cut(s)	744, 1844
BstMBI	GATC	7 cut(s)	4, 396, 450, 557, 1150, 1339, 1345
BstNI	CCWGG	4 cut(s)	552, 1371, 1509, 1563
BstNSI	RCATGY	3 cut(s)	601, 1364, 1384
BstSFI	CTRYAG	2 cut(s)	191, 1835
BstSLI	GKGCMC	3 cut(s)	333, 1743, 2011
BstUI	CGCG	2 cut(s)	632, 1798
BstV2I	GAAGAC	1 cut(s)	1098
BstX2I	RGATCY	1 cut(s)	557
BstYI	RGATCY	1 cut(s)	557
Bsu15I	ATCGAT	1 cut(s)	399
BsuI	GTATCC	2 cut(s)	1150, 1336
BsuTUI	ATCGAT	1 cut(s)	399
BtgI	CCRYGG	4 cut(s)	36, 151, 217, 508
BtsCI	GGATG	7 cut(s)	211, 743, 934, 1658, 1777, 1815, 1997
BtsI	GCAGTG	3 cut(s)	798, 1236, 1609
BtsIMutI	CAGTG	4 cut(s)	798, 1236, 1609, 1662
BveI	ACCTGC	2 cut(s)	1525, 1842
Cac8I	GCNNGC	9 cut(s)	608, 659, 888, 989, 1059, 1382, 1798, 1813, 1939
CaiI	CAGNNNCTG	1 cut(s)	1370
CfoI	GCGC	6 cut(s)	60, 606, 634, 886, 1798, 1800
Cfr10I	RCCGGY	1 cut(s)	886
Cfr9I	CCCGGG	3 cut(s)	543, 584, 1442
ClaI	ATCGAT	1 cut(s)	399
CseI	GACGC	1 cut(s)	826
CsiI	ACCWGGT	1 cut(s)	1561
Csp6I	GTAC	7 cut(s)	127, 415, 481, 715, 730, 1667, 1945
CviQI	GTAC	7 cut(s)	127, 415, 481, 715, 730, 1667, 1945
DdeI	CTNAG	8 cut(s)	783, 897, 936, 1045, 1137, 1575, 1671, 1848
DpnI	GATC	7 cut(s)	6, 398, 452, 559, 1152, 1341, 1347
DpnII	GATC	7 cut(s)	4, 396, 450, 557, 1150, 1339, 1345
DrdI	GACNNNNNNGTC	1 cut(s)	835
DseDI	GACNNNNNNGTC	1 cut(s)	835
EaeI	YGGCCR	1 cut(s)	1372
Eam1104I	CTCTTC	1 cut(s)	909
EarI	CTCTTC	1 cut(s)	909
EciI	GGCGGA	7 cut(s)	22, 345, 409, 570, 654, 736, 1012
Ecl136II	GAGCTC	1 cut(s)	385
Eco130I	CCWWGG	4 cut(s)	36, 151, 508, 1375
Eco147I	AGGCCT	1 cut(s)	1011
Eco24I	GRGCYC	6 cut(s)	333, 387, 550, 765, 1631, 1743
Eco32I	GATATC	1 cut(s)	537
Eco47I	GGWCC	5 cut(s)	176, 770, 828, 1193, 1446
Eco53kI	GAGCTC	1 cut(s)	385
Eco57I	CTGAAG	3 cut(s)	1227, 1755, 2001
Eco88I	CYCGRG	5 cut(s)	476, 543, 584, 766, 1442
EcoICRI	GAGCTC	1 cut(s)	385
EcoNI	CCTNNNNNAGG	3 cut(s)	1044, 1374, 1734
EcoO109I	RGGNCCY	4 cut(s)	176, 329, 1739, 1740
EcoRI	GAATTC	1 cut(s)	1417
EcoRII	CCWGG	4 cut(s)	550, 1369, 1507, 1561
EcoRV	GATATC	1 cut(s)	537
EcoT14I	CCWWGG	4 cut(s)	36, 151, 508, 1375
EcoT22I	ATGCAT	1 cut(s)	1294
EcoT38I	GRGCYC	6 cut(s)	333, 387, 550, 765, 1631, 1743
ErhI	CCWWGG	4 cut(s)	36, 151, 508, 1375
Esp3I	CGTCTC	1 cut(s)	1844
FalI	AAGNNNNNCTT	6 cut(s)	1192, 1224, 1335, 1367, 1728, 1760
FaqI	GGGAC	7 cut(s)	162, 470, 783, 841, 1409, 1778, 1920
FauI	CCCGC	4 cut(s)	138, 255, 615, 650
FbaI	TGATCA	2 cut(s)	1150, 1339
FokI	GGATG	7 cut(s)	198, 730, 941, 1645, 1784, 1802, 1984
FriOI	GRGCYC	6 cut(s)	333, 387, 550, 765, 1631, 1743
FspBI	CTAG	2 cut(s)	1521, 1910
GlaI	GCGC	6 cut(s)	59, 605, 633, 885, 1797, 1799
GsaI	CCCAGC	3 cut(s)	352, 572, 1405
GsuI	CTGGAG	1 cut(s)	534
HaeII	RGCGCY	1 cut(s)	61
HapII	CCGG	7 cut(s)	380, 434, 454, 544, 585, 887, 1443
HgaI	GACGC	1 cut(s)	826
HhaI	GCGC	6 cut(s)	60, 606, 634, 886, 1798, 1800
Hin6I	GCGC	6 cut(s)	58, 604, 632, 884, 1796, 1798
HinP1I	GCGC	6 cut(s)	58, 604, 632, 884, 1796, 1798
HincII	GTYRAC	2 cut(s)	1539, 1726
HindII	GTYRAC	2 cut(s)	1539, 1726
HindIII	AAGCTT	1 cut(s)	404
HinfI	GANTC	7 cut(s)	341, 576, 836, 932, 1022, 1219, 1250
HpaI	GTTAAC	1 cut(s)	1726
HpaII	CCGG	7 cut(s)	380, 434, 454, 544, 585, 887, 1443
HphI	GGTGA	2 cut(s)	245, 1340
Hpy166II	GTNNAC	6 cut(s)	715, 1193, 1334, 1539, 1726, 2009
Hpy188I	TCNGA	9 cut(s)	376, 710, 784, 937, 1416, 1586, 1678, 1735, 1756
Hpy8I	GTNNAC	6 cut(s)	715, 1193, 1334, 1539, 1726, 2009
HpyCH4III	ACNGT	6 cut(s)	147, 168, 1003, 1125, 1648, 1666
HpyF3I	CTNAG	8 cut(s)	783, 897, 936, 1045, 1137, 1575, 1671, 1848
HspAI	GCGC	6 cut(s)	58, 604, 632, 884, 1796, 1798
KflI	GGGWCCC	1 cut(s)	176
KpnI	GGTACC	1 cut(s)	130
KroI	GCCGGC	1 cut(s)	886
KroNI	GCCGGC	1 cut(s)	888
Ksp22I	TGATCA	2 cut(s)	1150, 1339
KspAI	GTTAAC	1 cut(s)	1726
Kzo9I	GATC	7 cut(s)	4, 396, 450, 557, 1150, 1339, 1345
LguI	GCTCTTC	1 cut(s)	909
LmnI	GCTCC	8 cut(s)	289, 370, 382, 390, 553, 796, 848, 1808
LweI	GCATC	5 cut(s)	582, 1000, 1173, 1581, 1824
MabI	ACCWGGT	1 cut(s)	1561
MaeI	CTAG	2 cut(s)	1521, 1910
MalI	GATC	7 cut(s)	6, 398, 452, 559, 1152, 1341, 1347
MboI	GATC	7 cut(s)	4, 396, 450, 557, 1150, 1339, 1345
MboII	GAAGA	6 cut(s)	896, 1103, 1403, 1455, 1696, 1953
MfeI	CAATTG	1 cut(s)	1100
MflI	RGATCY	1 cut(s)	557
MhlI	GDGCHC	7 cut(s)	333, 387, 550, 765, 1631, 1743, 2011
MlsI	TGGCCA	1 cut(s)	1374
MluNI	TGGCCA	1 cut(s)	1374
MlyI	GAGTC	2 cut(s)	335, 845
MmeI	TCCRAC	2 cut(s)	399, 1667
Mox20I	TGGCCA	1 cut(s)	1374
Mph1103I	ATGCAT	1 cut(s)	1294
MroNI	GCCGGC	1 cut(s)	886
MroXI	GAANNNNTTC	1 cut(s)	1703
MscI	TGGCCA	1 cut(s)	1374
MseI	TTAA	3 cut(s)	801, 843, 1725
MslI	CAYNNNNRTG	1 cut(s)	1297
Msp20I	TGGCCA	1 cut(s)	1374
MspA1I	CMGCKG	2 cut(s)	572, 871
MspI	CCGG	7 cut(s)	380, 434, 454, 544, 585, 887, 1443
MunI	CAATTG	1 cut(s)	1100
MvaI	CCWGG	4 cut(s)	552, 1371, 1509, 1563
MvnI	CGCG	2 cut(s)	632, 1798
NaeI	GCCGGC	1 cut(s)	888
NciI	CCSGG	9 cut(s)	380, 434, 455, 544, 545, 585, 586, 1443, 1444
NcoI	CCATGG	3 cut(s)	36, 151, 508
NdeII	GATC	7 cut(s)	4, 396, 450, 557, 1150, 1339, 1345
NgoMIV	GCCGGC	1 cut(s)	886
NsiI	ATGCAT	1 cut(s)	1294
NspI	RCATGY	3 cut(s)	601, 1364, 1384
NspV	TTCGAA	1 cut(s)	441
PaeI	GCATGC	1 cut(s)	1384
PauI	GCGCGC	1 cut(s)	1796
PceI	AGGCCT	1 cut(s)	1011
PciSI	GCTCTTC	1 cut(s)	909
PdiI	GCCGGC	1 cut(s)	888
PdmI	GAANNNNTTC	1 cut(s)	1703
PfeI	GAWTC	5 cut(s)	576, 932, 1022, 1219, 1250
PfoI	TCCNGGA	1 cut(s)	453
PleI	GAGTC	2 cut(s)	335, 844
PpsI	GAGTC	2 cut(s)	335, 844
PpuMI	RGGWCCY	1 cut(s)	176
Psp124BI	GAGCTC	1 cut(s)	387
Psp5II	RGGWCCY	1 cut(s)	176
Psp6I	CCWGG	4 cut(s)	550, 1369, 1507, 1561
PspFI	CCCAGC	3 cut(s)	348, 568, 1401
PspGI	CCWGG	4 cut(s)	550, 1369, 1507, 1561
PspOMI	GGGCCC	2 cut(s)	329, 1739
PspPPI	RGGWCCY	1 cut(s)	176
PstI	CTGCAG	2 cut(s)	195, 1839
PstNI	CAGNNNCTG	1 cut(s)	1370
PsuI	RGATCY	1 cut(s)	557
PteI	GCGCGC	1 cut(s)	1796
PvuII	CAGCTG	1 cut(s)	572
RsaI	GTAC	7 cut(s)	128, 416, 482, 716, 731, 1668, 1946
RsaNI	GTAC	7 cut(s)	127, 415, 481, 715, 730, 1667, 1945
RseI	CAYNNNNRTG	1 cut(s)	1297
SacI	GAGCTC	1 cut(s)	387
SapI	GCTCTTC	1 cut(s)	909
SaqAI	TTAA	3 cut(s)	801, 843, 1725
Sau3AI	GATC	7 cut(s)	4, 396, 450, 557, 1150, 1339, 1345
ScaI	AGTACT	1 cut(s)	416
SchI	GAGTC	2 cut(s)	335, 845
SduI	GDGCHC	7 cut(s)	333, 387, 550, 765, 1631, 1743, 2011
SexAI	ACCWGGT	1 cut(s)	1561
SfaNI	GCATC	5 cut(s)	582, 1000, 1173, 1581, 1824
SfcI	CTRYAG	2 cut(s)	191, 1835
SfuI	TTCGAA	1 cut(s)	441
SinI	GGWCC	5 cut(s)	176, 770, 828, 1193, 1446
SmaI	CCCGGG	3 cut(s)	545, 586, 1444
SmiMI	CAYNNNNRTG	1 cut(s)	1297
SphI	GCATGC	1 cut(s)	1384
SseBI	AGGCCT	1 cut(s)	1011
SspMI	CTAG	2 cut(s)	1521, 1910
SstI	GAGCTC	1 cut(s)	387
StuI	AGGCCT	1 cut(s)	1011
StyI	CCWWGG	4 cut(s)	36, 151, 508, 1375
TaaI	ACNGT	6 cut(s)	147, 168, 1003, 1125, 1648, 1666
TaqI	TCGA	7 cut(s)	399, 441, 539, 590, 839, 1686, 1697
TatI	WGTACW	1 cut(s)	414
TauI	GCSGC	6 cut(s)	29, 226, 229, 501, 647, 670
TfiI	GAWTC	5 cut(s)	576, 932, 1022, 1219, 1250
Tru1I	TTAA	3 cut(s)	801, 843, 1725
Tru9I	TTAA	3 cut(s)	801, 843, 1725
TscAI	CASTG	4 cut(s)	798, 1243, 1609, 1669
TspDTI	ATGAA	4 cut(s)	641, 938, 1035, 1736
TspGWI	ACGGA	6 cut(s)	264, 360, 409, 1322, 1456, 1539
TspMI	CCCGGG	3 cut(s)	543, 584, 1442
TspRI	CASTG	4 cut(s)	798, 1243, 1609, 1669
VneI	GTGCAC	1 cut(s)	2007
VpaK11BI	GGWCC	5 cut(s)	176, 770, 828, 1193, 1446
XagI	CCTNNNNNAGG	3 cut(s)	1044, 1374, 1734
XapI	RAATTY	5 cut(s)	854, 1116, 1417, 1680, 1700
XceI	RCATGY	3 cut(s)	601, 1364, 1384
XcmI	CCANNNNNNNNNTGG	2 cut(s)	149, 1520
XmaI	CCCGGG	3 cut(s)	543, 584, 1442
XmnI	GAANNNNTTC	1 cut(s)	1703
XspI	CTAG	2 cut(s)	1521, 1910
ZrmI	AGTACT	1 cut(s)	416
Zsp2I	ATGCAT	1 cut(s)	1294

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.