Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0009244

Physical Location & Seq

Genomic Coordinates Forward (+)

5379056 .. 5382450

Gene Structure 3395 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00163030.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

ATGAACAACTTTGATGAAGAAAGTATTTTGATCGGAGGTCCTGAACAAGATGTTTCGAGCGTGCAAGCAGGCCCACGACTACGCCGCCTACGCCCAACAACAGCAGCAGCGACAACCACCGCAGCCACAACAACCGCCGCCGCAGCAACAATTCGGGTACCCGCCCCAGGCCCAACAGTTTCACGGCCCTCCTTTCGGACCCCCACACCCGCCCCTCCAGCAATTCCCCTACCACCCCCACTTACAGCAGCAACCGCCGCCGCAGGTTCTCTCCCACGCGCCGCCGCCTCACCCTCACCACCTCCCCCTCCGCCGGCCTTCGCCCCCCACCTCGCCCCTCCCCTCGTCCCCCCGCCTTTCCACGCCGGCCCTCCTCCTCCGGTCGCCGGTCCTCCCTCCGACCCGGAGCTCCACAAACGGATCGACAAGCTCGTCGAGTACTCCGCCAAGAACGGACCCGACTTCGAAGCCATGATTCGCGAGAAGCAGCAGGATAATCCCGACTACGGTTTCCTCTTCGGCGGCGAAGGCCACGGCTATTACCGTTACAAGCTCTACACCTCCACTCGGGTCGGGTCCTTCAACCCGAATCCGCAATTCGCTCCCCACATGCTTCGTCCGCCGCCGAATCCGATGATGAATGGGCCCCCGAACCCGATGATGGGCGGCCCGCAGTCGTATTTCTACGACCAGCAGCGGCATAATCAGCAGGCTTTCGGAGTTTATGGGAGGTCCGATTATGACCAGGCGGCGGCGCAACCCTTTAAAGGGCTTTCGGGGCCGCTGCCTCCTGATGTTGCAATGGAGCTGAGCAATGTGCTTATGACGCTGAATGGGACCAAAGAGTCGATTAAAGGAGCCAAGTTTTGGTTTATGCAGAGGTCTATTTTCGCTCCGGCTCTGGCTGAGGCTCTTAGAGAGAGGGTGTTTGGACTTGATGATCCTGAGAGGCAGCTACATGTGATATTTCTTGCCAATGACATTTTGTTCGACAGCTCACATCGTCGAACTGGTGAAGGCCTTGATAACGAATCACTTGCACTCAAACCTATCTTAGGTTCCATGCTTGCAAGGATTTATCACAACCCTCAAATAACAGAAGACAATCAGATGAAGTTGCAGCAAATTTTGCAGTTATGGGTTTCCAATAACATTTATGATCAGGATACAATTGATGCATTTAGGAATGAGATGATTGGTGGACCATCAAGTAATTCTTTTCCAGGTCTTCCAAAAGACTTGGCTACTACTTCAACAGATTCAGCAGCAGGATTGCCACAATGGCAGCCTGATAGGCAAGGTTCTGTTTCGAGTTCACACGATCAAGAGCATCTTGATAAACATGTAGCTCCTGGTCAAGTGGTGCCACTTTCCGTGCCAACCCAGCAATTTCTTCCAAATTCAGTCCCTCCTGCTGCCTTTGCTGGGCCCCTCCCCATACCATCTTCTGTTCAACCAGCAATCCCACAACCCCTGCCACATTTATTGCCAGGTCAAGCTGCTACCAGCGGCGAGAAGTTGCCACCATATCCTTTGTTCCCACCTGGTCTTATTCCTGAGATGGTCAGAAAGATGCAGATTGGCAGTGGGGTGCCATACTCACCGATGAGTCCTCTGGACATTCCAACCATCATACCTCCATCCACTGTACCTCAGTCCGAAATTCTTGAGAGAGTGTCAAAGTTCTTCAAAGAGATTGGAGAAGTTAACCCTTCTGAAGGACCTATTCATGGTTCTGATGGTAGAGACGATGATGAGTACGAAAGTAGTACTCCGGCACGCAAGGGAGGAGCTTGCATCCCTCCACCCCCAAACCTGCAGGTAGACCCAGAGACAGGGGCTTATGCAGATGGAAGTGTTGATCGAAAGAGTGGCTCGGGGAGATTGGGACTCGGGGCCACAGCTAATCCAAATGAGGTGAGCCAGTACGACGATGTATATTCTTCTTACCGGAAACAGAGAAGCACCAACTACCACTCTTCCATGAGTGCAAGAGCTGCAGCAAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006873 GO:0006874 GO:0006875 GO:0007204 GO:0008150 GO:0008285 GO:0009966 GO:0009967 GO:0009987 GO:0010646 GO:0010647 GO:0012505 GO:0016020 GO:0016528 GO:0016529 GO:0019725 GO:0023051 GO:0023056 GO:0030001 GO:0030003 GO:0031090 GO:0031984 GO:0032879 GO:0033017 GO:0034220 GO:0042127 GO:0042175 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044325 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0048471 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050848 GO:0050850 GO:0051179 GO:0051209 GO:0051234 GO:0051282 GO:0051283 GO:0051480 GO:0051641 GO:0051649 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055085 GO:0060401 GO:0060402 GO:0065007 GO:0065008 GO:0070588 GO:0070838 GO:0070884 GO:0070886 GO:0072503 GO:0072507 GO:0072511 GO:0097553 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:0098827 GO:0106056 GO:0106058 GO:1902531 GO:1902533

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

CTD_bind Surp

Protein Analysis

669

Amino Acids

71.91

Weight (kDa)

5.87

Isoelectric Point (pI)

57.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Surp	PF01805	139 - 186	6.2e-14	Surp module
CID	PF04818	270 - 393	4.9e-21	CID domain
SWAP1_C	PF25123	509 - 669	2.1e-89	SUPPRESSOR-OF-WHITE-APRICOT-like, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009244)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31200 AT4G31200 AT4G31200
fragaria_vesca	FvH4_2g36600
malus_domestica	MD08G1126000.v1.1 MD15G1105800.v1.1
prunus_persica	Prupe.1G457600_v2.0.a1 Prupe.1G457600_v2.0.a1 Prupe.1G457600_v2.0.a1
pyrus_communis	pycom08g10510 pycom15g09600 pycom15g09640
rosa_chinensis	RchiOBHm_Chr6g0305221
rosa_laevigata	RLG00000010907
rosa_multiflora	Rmu_co8150504.1_g000001
rosa_roxburghii	Rroxscaffold_7G00163030
rosa_rugosa	Rorug06G0338700
rosa_samantha	Rh6AG450400 Rh6BG451000 Rh6CG464300 Rh6DG451000
rosa_wichuraiana	Rw6G039250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	431, 844
Acc36I	ACCTGC	3 cut(s)	254, 1810, 1824
Acc65I	GGTACC	1 cut(s)	157
AccB1I	GGYRCC	3 cut(s)	157, 1363, 1591
AccB7I	CCANNNNNTGG	1 cut(s)	867
AccI	GTMKAC	1 cut(s)	1824
AccII	CGCG	2 cut(s)	279, 480
AclWI	GGATC	2 cut(s)	428, 935
AcsI	RAATTY	3 cut(s)	1125, 1399, 1662
AcuI	CTGAAG	1 cut(s)	1737
AfaI	GTAC	6 cut(s)	159, 440, 1650, 1760, 1771, 1928
AflIII	ACRYGT	2 cut(s)	958, 1342
AgsI	TTSAA	4 cut(s)	583, 1254, 1454, 1690
AjnI	CCWGG	6 cut(s)	166, 744, 1222, 1351, 1489, 1543
Alw21I	GWGCWC	1 cut(s)	411
Alw26I	GTCTC	2 cut(s)	1740, 1826
AlwI	GGATC	2 cut(s)	428, 935
Ama87I	CYCGRG	3 cut(s)	567, 1876, 1892
ApaI	GGGCCC	2 cut(s)	648, 1431
ApoI	RAATTY	3 cut(s)	1125, 1399, 1662
ArsI	GACNNNNNNTTYG	2 cut(s)	971, 1003
Asp718I	GGTACC	1 cut(s)	157
AspLEI	GCGC	2 cut(s)	281, 757
AsuC2I	CCSGG	1 cut(s)	404
AsuHPI	GGTGA	5 cut(s)	282, 288, 1025, 1593, 1930
AsuII	TTCGAA	1 cut(s)	465
AvaI	CYCGRG	3 cut(s)	567, 1876, 1892
AvaII	GGWCC	9 cut(s)	38, 198, 389, 455, 576, 732, 837, 1202, 1721
BaeGI	GKGCMC	2 cut(s)	648, 1431
BanI	GGYRCC	3 cut(s)	157, 1363, 1591
BanII	GRGCYC	3 cut(s)	411, 648, 1431
BbsI	GAAGAC	2 cut(s)	1107, 1220
Bbv12I	GWGCWC	1 cut(s)	411
BbvCI	CCTCAGC	1 cut(s)	906
BccI	CCATC	8 cut(s)	655, 1213, 1450, 1555, 1637, 1648, 1733, 1844
BceAI	ACGGC	2 cut(s)	200, 550
BcgI	CGANNNNNNTGC	2 cut(s)	1019, 1053
BciT130I	CCWGG	6 cut(s)	168, 746, 1224, 1353, 1491, 1545
BciVI	GTATCC	1 cut(s)	1159
BclI	TGATCA	1 cut(s)	1159
BcnI	CCSGG	1 cut(s)	404
BcoDI	GTCTC	2 cut(s)	1740, 1826
BfmI	CTRYAG	2 cut(s)	1817, 1998
BfuAI	ACCTGC	3 cut(s)	254, 1810, 1824
BfuI	GTATCC	1 cut(s)	1159
BglI	GCCNNNNNGGC	2 cut(s)	1282, 1294
BlpI	GCTNAGC	1 cut(s)	809
BmcAI	AGTACT	2 cut(s)	440, 1771
Bme1390I	CCNGG	7 cut(s)	168, 404, 746, 1224, 1353, 1491, 1545
Bme18I	GGWCC	9 cut(s)	38, 198, 389, 455, 576, 732, 837, 1202, 1721
BmeT110I	CYCGRG	3 cut(s)	567, 1876, 1892
BmrFI	CCNGG	7 cut(s)	168, 404, 746, 1224, 1353, 1491, 1545
BmsI	GCATC	4 cut(s)	1165, 1339, 1563, 1806
BpiI	GAAGAC	2 cut(s)	1107, 1220
BpmI	CTGGAG	1 cut(s)	201
Bpu10I	CCTNAGC	1 cut(s)	906
Bpu1102I	GCTNAGC	1 cut(s)	809
Bpu14I	TTCGAA	1 cut(s)	465
BpuEI	CTTGAG	1 cut(s)	1688
BpuMI	CCSGG	1 cut(s)	404
BsaJI	CCNNGG	2 cut(s)	166, 532
BsaWI	WCCGGW	2 cut(s)	379, 1950
Bse118I	RCCGGY	3 cut(s)	313, 365, 386
Bse1I	ACTGG	2 cut(s)	1015, 1924
Bse3DI	GCAATG	2 cut(s)	807, 820
BseBI	CCWGG	6 cut(s)	168, 746, 1224, 1353, 1491, 1545
BseDI	CCNNGG	2 cut(s)	166, 532
BseGI	GGATG	2 cut(s)	1640, 1797
BseMI	GCAATG	2 cut(s)	807, 820
BseMII	CTCAG	5 cut(s)	800, 897, 936, 1548, 1667
BseNI	ACTGG	2 cut(s)	1015, 1924
BseRI	GAGGAG	3 cut(s)	363, 366, 1803
BseSI	GKGCMC	2 cut(s)	648, 1431
BseYI	CCCAGC	2 cut(s)	1383, 1424
Bsh1236I	CGCG	2 cut(s)	279, 480
Bsh1285I	CGRYCG	1 cut(s)	384
BshNI	GGYRCC	3 cut(s)	157, 1363, 1591
BsiEI	CGRYCG	1 cut(s)	384
BsiHKAI	GWGCWC	1 cut(s)	411
BsiHKCI	CYCGRG	3 cut(s)	567, 1876, 1892
BsiSI	CCGG	8 cut(s)	314, 366, 380, 387, 404, 896, 1775, 1951
BslFI	GGGAC	4 cut(s)	332, 850, 1391, 1902
BsmAI	GTCTC	2 cut(s)	1740, 1826
BsmBI	CGTCTC	1 cut(s)	1740
BsmFI	GGGAC	4 cut(s)	332, 850, 1391, 1902
BsoBI	CYCGRG	3 cut(s)	567, 1876, 1892
Bsp119I	TTCGAA	1 cut(s)	465
Bsp120I	GGGCCC	2 cut(s)	644, 1427
Bsp1286I	GDGCHC	3 cut(s)	411, 648, 1431
Bsp143I	GATC	6 cut(s)	30, 420, 940, 1159, 1321, 1861
Bsp1720I	GCTNAGC	1 cut(s)	809
Bsp68I	TCGCGA	1 cut(s)	480
BspCNI	CTCAG	5 cut(s)	801, 898, 937, 1549, 1666
BspFNI	CGCG	2 cut(s)	279, 480
BspMAI	CTGCAG	2 cut(s)	1821, 2002
BspMI	ACCTGC	3 cut(s)	254, 1810, 1824
BspPI	GGATC	2 cut(s)	428, 935
BspT104I	TTCGAA	1 cut(s)	465
BspT107I	GGYRCC	3 cut(s)	157, 1363, 1591
BsrDI	GCAATG	2 cut(s)	807, 820
BsrFI	RCCGGY	3 cut(s)	313, 365, 386
BsrI	ACTGG	2 cut(s)	1015, 1924
BssAI	RCCGGY	3 cut(s)	313, 365, 386
BssECI	CCNNGG	2 cut(s)	166, 532
BssMI	GATC	6 cut(s)	30, 420, 940, 1159, 1321, 1861
Bst2UI	CCWGG	6 cut(s)	168, 746, 1224, 1353, 1491, 1545
Bst4CI	ACNGT	4 cut(s)	178, 509, 545, 1648
Bst6I	CTCTTC	2 cut(s)	521, 1984
BstAPI	GCANNNNNTGC	2 cut(s)	1129, 1997
BstBI	TTCGAA	1 cut(s)	465
BstDEI	CTNAG	7 cut(s)	809, 906, 914, 945, 1054, 1557, 1653
BstDSI	CCRYGG	1 cut(s)	532
BstENI	CCTNNNNNAGG	2 cut(s)	1053, 1716
BstF5I	GGATG	2 cut(s)	1640, 1797
BstFNI	CGCG	2 cut(s)	279, 480
BstHHI	GCGC	2 cut(s)	281, 757
BstKTI	GATC	6 cut(s)	33, 423, 943, 1162, 1324, 1864
BstMAI	GTCTC	2 cut(s)	1740, 1826
BstMBI	GATC	6 cut(s)	30, 420, 940, 1159, 1321, 1861
BstMCI	CGRYCG	1 cut(s)	384
BstNI	CCWGG	6 cut(s)	168, 746, 1224, 1353, 1491, 1545
BstNSI	RCATGY	3 cut(s)	613, 962, 1346
BstSCI	CCNGG	7 cut(s)	166, 402, 744, 1222, 1351, 1489, 1543
BstSFI	CTRYAG	2 cut(s)	1817, 1998
BstSLI	GKGCMC	2 cut(s)	648, 1431
BstUI	CGCG	2 cut(s)	279, 480
BstV2I	GAAGAC	2 cut(s)	1107, 1220
BsuI	GTATCC	1 cut(s)	1159
BtgI	CCRYGG	1 cut(s)	532
BtsCI	GGATG	2 cut(s)	1640, 1797
BtsI	GCAGTG	1 cut(s)	1591
BtsIMutI	CAGTG	2 cut(s)	1591, 1644
BtuMI	TCGCGA	1 cut(s)	480
BveI	ACCTGC	3 cut(s)	254, 1810, 1824
CfoI	GCGC	2 cut(s)	281, 757
Cfr10I	RCCGGY	3 cut(s)	313, 365, 386
CseI	GACGC	1 cut(s)	835
CsiI	ACCWGGT	1 cut(s)	1543
Csp6I	GTAC	6 cut(s)	158, 439, 1649, 1759, 1770, 1927
CspCI	CAANNNNNGTGG	2 cut(s)	1467, 1502
CviAII	CATG	7 cut(s)	472, 610, 959, 1063, 1343, 1730, 1984
CviQI	GTAC	6 cut(s)	158, 439, 1649, 1759, 1770, 1927
DdeI	CTNAG	7 cut(s)	809, 906, 914, 945, 1054, 1557, 1653
DpnI	GATC	6 cut(s)	32, 422, 942, 1161, 1323, 1863
DpnII	GATC	6 cut(s)	30, 420, 940, 1159, 1321, 1861
DraI	TTTAAA	1 cut(s)	766
DrdI	GACNNNNNNGTC	2 cut(s)	431, 844
DseDI	GACNNNNNNGTC	2 cut(s)	431, 844
Eam1104I	CTCTTC	2 cut(s)	521, 1984
EarI	CTCTTC	2 cut(s)	521, 1984
EciI	GGCGGA	3 cut(s)	300, 433, 609
Ecl136II	GAGCTC	1 cut(s)	409
Eco147I	AGGCCT	1 cut(s)	1020
Eco24I	GRGCYC	3 cut(s)	411, 648, 1431
Eco47I	GGWCC	9 cut(s)	38, 198, 389, 455, 576, 732, 837, 1202, 1721
Eco53kI	GAGCTC	1 cut(s)	409
Eco57I	CTGAAG	1 cut(s)	1737
Eco88I	CYCGRG	3 cut(s)	567, 1876, 1892
EcoICRI	GAGCTC	1 cut(s)	409
EcoNI	CCTNNNNNAGG	2 cut(s)	1053, 1716
EcoO109I	RGGNCCY	5 cut(s)	38, 576, 645, 1428, 1721
EcoRII	CCWGG	6 cut(s)	166, 744, 1222, 1351, 1489, 1543
EcoT22I	ATGCAT	1 cut(s)	1180
EcoT38I	GRGCYC	3 cut(s)	411, 648, 1431
Esp3I	CGTCTC	1 cut(s)	1740
FaeI	CATG	7 cut(s)	475, 613, 962, 1066, 1346, 1733, 1987
FalI	AAGNNNNNCTT	4 cut(s)	1201, 1233, 1317, 1349
FaqI	GGGAC	4 cut(s)	332, 850, 1391, 1902
FatI	CATG	7 cut(s)	471, 609, 958, 1062, 1342, 1729, 1983
FauI	CCCGC	4 cut(s)	169, 217, 360, 678
FbaI	TGATCA	1 cut(s)	1159
FblI	GTMKAC	1 cut(s)	1824
FokI	GGATG	2 cut(s)	1627, 1784
FriOI	GRGCYC	3 cut(s)	411, 648, 1431
GlaI	GCGC	2 cut(s)	280, 756
GsaI	CCCAGC	2 cut(s)	1387, 1428
GsuI	CTGGAG	1 cut(s)	201
HapII	CCGG	8 cut(s)	314, 366, 380, 387, 404, 896, 1775, 1951
HgaI	GACGC	1 cut(s)	835
HhaI	GCGC	2 cut(s)	281, 757
Hin1II	CATG	7 cut(s)	475, 613, 962, 1066, 1346, 1733, 1987
Hin6I	GCGC	2 cut(s)	279, 755
HinP1I	GCGC	2 cut(s)	279, 755
HincII	GTYRAC	1 cut(s)	1708
HindII	GTYRAC	1 cut(s)	1708
HinfI	GANTC	8 cut(s)	475, 589, 628, 845, 1031, 1259, 1609, 1890
HpaI	GTTAAC	1 cut(s)	1708
HpaII	CCGG	8 cut(s)	314, 366, 380, 387, 404, 896, 1775, 1951
HphI	GGTGA	5 cut(s)	282, 288, 1025, 1593, 1930
Hpy166II	GTNNAC	4 cut(s)	1202, 1316, 1708, 1825
Hpy8I	GTNNAC	4 cut(s)	1202, 1316, 1708, 1825
Hpy99I	CGWCG	3 cut(s)	437, 1008, 1934
HpyAV	CCTTC	6 cut(s)	328, 521, 589, 1010, 1712, 1722
HpyCH4III	ACNGT	4 cut(s)	178, 509, 545, 1648
HpyF3I	CTNAG	7 cut(s)	809, 906, 914, 945, 1054, 1557, 1653
Hsp92II	CATG	7 cut(s)	475, 613, 962, 1066, 1346, 1733, 1987
HspAI	GCGC	2 cut(s)	279, 755
KpnI	GGTACC	1 cut(s)	161
KroI	GCCGGC	2 cut(s)	313, 365
KroNI	GCCGGC	2 cut(s)	315, 367
Ksp22I	TGATCA	1 cut(s)	1159
KspAI	GTTAAC	1 cut(s)	1708
Kzo9I	GATC	6 cut(s)	30, 420, 940, 1159, 1321, 1861
LmnI	GCTCC	8 cut(s)	406, 414, 607, 805, 857, 898, 1354, 1790
LweI	GCATC	4 cut(s)	1165, 1339, 1563, 1806
MabI	ACCWGGT	1 cut(s)	1543
MaeIII	GTNAC	1 cut(s)	545
MalI	GATC	6 cut(s)	32, 422, 942, 1161, 1323, 1863
MboI	GATC	6 cut(s)	30, 420, 940, 1159, 1321, 1861
MboII	GAAGA	9 cut(s)	29, 508, 1112, 1220, 1385, 1437, 1678, 1935, 1971
MfeI	CAATTG	1 cut(s)	1170
MhlI	GDGCHC	3 cut(s)	411, 648, 1431
MluCI	AATT	9 cut(s)	150, 222, 596, 1125, 1170, 1213, 1388, 1399, 1662
MlyI	GAGTC	3 cut(s)	854, 1618, 1884
MmeI	TCCRAC	2 cut(s)	423, 1649
Mph1103I	ATGCAT	1 cut(s)	1180
MroNI	GCCGGC	2 cut(s)	313, 365
MseI	TTAA	3 cut(s)	765, 852, 1707
MspA1I	CMGCKG	3 cut(s)	697, 784, 1509
MspI	CCGG	8 cut(s)	314, 366, 380, 387, 404, 896, 1775, 1951
MspR9I	CCNGG	7 cut(s)	168, 404, 746, 1224, 1353, 1491, 1545
MunI	CAATTG	1 cut(s)	1170
MvaI	CCWGG	6 cut(s)	168, 746, 1224, 1353, 1491, 1545
MvnI	CGCG	2 cut(s)	279, 480
NaeI	GCCGGC	2 cut(s)	315, 367
NciI	CCSGG	1 cut(s)	404
NdeII	GATC	6 cut(s)	30, 420, 940, 1159, 1321, 1861
NgoMIV	GCCGGC	2 cut(s)	313, 365
NlaIII	CATG	7 cut(s)	475, 613, 962, 1066, 1346, 1733, 1987
NruI	TCGCGA	1 cut(s)	480
NsiI	ATGCAT	1 cut(s)	1180
NspI	RCATGY	3 cut(s)	613, 962, 1346
NspV	TTCGAA	1 cut(s)	465
PceI	AGGCCT	1 cut(s)	1020
PciI	ACATGT	2 cut(s)	958, 1342
PcsI	WCGNNNNNNNCGW	1 cut(s)	429
PdiI	GCCGGC	2 cut(s)	315, 367
PfeI	GAWTC	5 cut(s)	475, 589, 628, 1031, 1259
PflMI	CCANNNNNTGG	1 cut(s)	867
PleI	GAGTC	3 cut(s)	853, 1617, 1884
PpsI	GAGTC	3 cut(s)	853, 1617, 1884
PpuMI	RGGWCCY	3 cut(s)	38, 576, 1721
PscI	ACATGT	2 cut(s)	958, 1342
Psp124BI	GAGCTC	1 cut(s)	411
Psp5II	RGGWCCY	3 cut(s)	38, 576, 1721
Psp6I	CCWGG	6 cut(s)	166, 744, 1222, 1351, 1489, 1543
PspFI	CCCAGC	2 cut(s)	1383, 1424
PspGI	CCWGG	6 cut(s)	166, 744, 1222, 1351, 1489, 1543
PspOMI	GGGCCC	2 cut(s)	644, 1427
PspPPI	RGGWCCY	3 cut(s)	38, 576, 1721
PstI	CTGCAG	2 cut(s)	1821, 2002
RruI	TCGCGA	1 cut(s)	480
RsaI	GTAC	6 cut(s)	159, 440, 1650, 1760, 1771, 1928
RsaNI	GTAC	6 cut(s)	158, 439, 1649, 1759, 1770, 1927
SacI	GAGCTC	1 cut(s)	411
SaqAI	TTAA	3 cut(s)	765, 852, 1707
Sau3AI	GATC	6 cut(s)	30, 420, 940, 1159, 1321, 1861
SbfI	CCTGCAGG	1 cut(s)	1821
ScaI	AGTACT	2 cut(s)	440, 1771
SchI	GAGTC	3 cut(s)	854, 1618, 1884
ScrFI	CCNGG	7 cut(s)	168, 404, 746, 1224, 1353, 1491, 1545
SdaI	CCTGCAGG	1 cut(s)	1821
SduI	GDGCHC	3 cut(s)	411, 648, 1431
SexAI	ACCWGGT	1 cut(s)	1543
SfaNI	GCATC	4 cut(s)	1165, 1339, 1563, 1806
SfcI	CTRYAG	2 cut(s)	1817, 1998
SfuI	TTCGAA	1 cut(s)	465
SinI	GGWCC	9 cut(s)	38, 198, 389, 455, 576, 732, 837, 1202, 1721
SmlI	CTYRAG	1 cut(s)	1667
SmoI	CTYRAG	1 cut(s)	1667
Sse8387I	CCTGCAGG	1 cut(s)	1821
Sse9I	AATT	9 cut(s)	150, 222, 596, 1125, 1170, 1213, 1388, 1399, 1662
SseBI	AGGCCT	1 cut(s)	1020
SstI	GAGCTC	1 cut(s)	411
StuI	AGGCCT	1 cut(s)	1020
StyD4I	CCNGG	7 cut(s)	166, 402, 744, 1222, 1351, 1489, 1543
TaaI	ACNGT	4 cut(s)	178, 509, 545, 1648
TaqI	TCGA	9 cut(s)	56, 423, 435, 465, 848, 990, 1006, 1310, 1864
TasI	AATT	9 cut(s)	150, 222, 596, 1125, 1170, 1213, 1388, 1399, 1662
TatI	WGTACW	2 cut(s)	438, 1769
TfiI	GAWTC	5 cut(s)	475, 589, 628, 1031, 1259
Tru1I	TTAA	3 cut(s)	765, 852, 1707
Tru9I	TTAA	3 cut(s)	765, 852, 1707
TscAI	CASTG	2 cut(s)	1591, 1651
TspDTI	ATGAA	5 cut(s)	17, 30, 653, 1127, 1718
TspGWI	ACGGA	3 cut(s)	433, 468, 1363
TspRI	CASTG	2 cut(s)	1591, 1651
Van91I	CCANNNNNTGG	1 cut(s)	867
VpaK11BI	GGWCC	9 cut(s)	38, 198, 389, 455, 576, 732, 837, 1202, 1721
XagI	CCTNNNNNAGG	2 cut(s)	1053, 1716
XapI	RAATTY	3 cut(s)	1125, 1399, 1662
XceI	RCATGY	3 cut(s)	613, 962, 1346
XmiI	GTMKAC	1 cut(s)	1824
ZrmI	AGTACT	2 cut(s)	440, 1771
Zsp2I	ATGCAT	1 cut(s)	1180

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.