AT4G31430

No description available

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
15248377 .. 15252837
4461 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G31430.2

Sequence Viewer

Length: 1458 bp
ATGGATTCCGTCTCCGGTTACGCCGCCGGAGCAGGTCAGCCTCGAGTCGGTGGGAAAATTGTTCGACCACGACGCACCGCTGTTGTCAGGACGCCGTGTGAGCGCCCCGTTCAGAGATCCCGAGATCCTCCTCAGCAAAACCCTAGTTGGATCTCCAGGCTCGTTTACAAACCCGCCAGCGTAATTGCTTCCGGCGCCGGAAAATTCATTTCTTCCGTCGTCTTCTCCGACTCTTCCTCATCTTCGGAGGAGGACGAGGATTCATCTTCAGATATTGATGGTGATGAGGATGTTGAGAAGAACAATCCCGATTTTACTGAAGAGGACCTTCTGAGTGCCCAGCAACCAAGCATTCAACGACTCAGTTCTAAGCGTGTAATTGAGCAGCTTCTCTTGCAAGAAACATTTGCAAGGGAAGAGGGTGATAGGTTAATAGATATCATCAAGGCTAGGGTTGTAGATCATCCCAGCGTCCCCTCTGCTATTGAGACGAGTCATGATGACTATGGATTGACAAGCGACGTGAATGTGGGTGAAATGTCCAATACAGCTGTCATGGAAGCAAGAAAATGGTTGGAGGAGAAGAAATCAGGATCAAGTTCAAAGTATAAAGCAACTGAAGATGGTGCTGGATCGCCTGTGGACGTGGCCAAGTCTTATATGCGAGCTCGTCTGCCATGGGGATCTCCAGCTGCGAATAATTTAGATTTTCGATCACCATCATCAGCAAGAGTGCAAGGGACACCCCTTCCTTATAGCGCTGGAAACTTTTCCTCATCCAAGCTGAAAAGGAAGTCCGGTTCTAATCAGTCATGGAATATTCAAGATGAAATTCGCAAAGTCAGAGCTAAAGCAACCGAGGAAATGCTTAAAAGTCCCAGTAGTGTAGCCTCTTTGGAACCTAAATACAGCCCCTATGTTTTAGCGACTGATATGCTCAAAGGAAATGCTTCGTCTTTGAATGCTGATGGAGCTGTACGGAATGAACAAAGCAGAGCTCTACCAAATTCAGCCATACCTACCTCTGAGCACAATCAGACTACGGAAGCTAATCAAGCCGTCAAAGAAACAGGAGTTTTACACACTAGATCTCGTGGAGTTGGTTTGGAGGAGACATTTATCTCCACACAAGGAGTCAAGCCATCTGAAGATACGAATACCGCTCCTCAAAGTGGAACTGCTGTAGATGACTTCAATGATCAAGATGGCGATTTTATCCAACCTACTTCTACTATCGGAAACACCACAAATGCTGTCTTGGCTCTTGGGGCAACTTTGGATCCTACTGGGAACTCTTGCATCCCTAAAGATGTGTTTGAAACATCAAAAGAAGCTGATGAAATAGGCGCATCACGTCATACTTCTAACGGTTTCCCATCTTCATCACCTAGCGGTTATGGAAGGTCAACCAAAACCCACACCACCAGAAGAAACCAAGGCTTCTCAGCCTATAGCTGA

Protein Analysis

485

Amino Acids

52.15

Weight (kDa)

5.43

Isoelectric Point (pI)

54.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 23
AccB1I GGYRCC 1 cut(s) 194
AccBSI CCGCTC 1 cut(s) 1163
AciI CCGC 5 cut(s) 24, 78, 174, 1161, 1392
AclWI GGATC 8 cut(s) 111, 119, 158, 601, 640, 691, 1274, 1287
AcoI YGGCCR 1 cut(s) 648
AcsI RAATTY 3 cut(s) 203, 831, 1006
AcuI CTGAAG 4 cut(s) 252, 339, 639, 1167
AcyI GRCGYC 2 cut(s) 92, 195
AfaI GTAC 1 cut(s) 978
AfeI AGCGCT 1 cut(s) 760
AfiI CCNNNNNNNGG 2 cut(s) 47, 1172
AgsI TTSAA 6 cut(s) 356, 603, 824, 961, 1195, 1319
AjiI CACGTC 3 cut(s) 523, 646, 1355
AjnI CCWGG 1 cut(s) 155
AloI GAACNNNNNNTCC 2 cut(s) 784, 816
Alw21I GWGCWC 3 cut(s) 670, 1000, 1032
Alw26I GTCTC 3 cut(s) 16, 482, 1106
AlwI GGATC 8 cut(s) 111, 119, 158, 601, 640, 691, 1274, 1287
Ama87I CYCGRG 2 cut(s) 42, 120
Aor51HI AGCGCT 1 cut(s) 760
AoxI GGCC 1 cut(s) 648
ApeKI GCWGC 2 cut(s) 385, 692
ApoI RAATTY 3 cut(s) 203, 831, 1006
Asp700I GAANNNNTTC 2 cut(s) 769, 949
AspLEI GCGC 4 cut(s) 105, 197, 761, 1349
AspS9I GGNCC 1 cut(s) 325
AsuHPI GGTGA 5 cut(s) 293, 434, 545, 708, 1377
AvaI CYCGRG 2 cut(s) 42, 120
AvaII GGWCC 1 cut(s) 325
BaeGI GKGCMC 1 cut(s) 340
BalI TGGCCA 1 cut(s) 650
BamHI GGATCC 1 cut(s) 1279
BanI GGYRCC 1 cut(s) 194
BanII GRGCYC 2 cut(s) 670, 1000
BauI CACGAG 1 cut(s) 1092
BbsI GAAGAC 1 cut(s) 214
Bbv12I GWGCWC 3 cut(s) 670, 1000, 1032
BbvCI CCTCAGC 1 cut(s) 132
BbvI GCAGC 2 cut(s) 397, 679
BccI CCATC 7 cut(s) 272, 617, 727, 962, 1150, 1199, 1384
BceAI ACGGC 2 cut(s) 79, 1043
BcgI CGANNNNNNTGC 2 cut(s) 916, 950
BciT130I CCWGG 1 cut(s) 157
BclI TGATCA 1 cut(s) 1198
BcoDI GTCTC 3 cut(s) 16, 482, 1106
BfaI CTAG 4 cut(s) 144, 450, 1086, 1389
BfmI CTRYAG 2 cut(s) 1182, 1450
BfoI RGCGCY 3 cut(s) 106, 198, 762
BfuAI ACCTGC 1 cut(s) 23
BglII AGATCT 1 cut(s) 1088
BisI GCNGC 3 cut(s) 24, 386, 693
BlsI GCNGC 3 cut(s) 25, 387, 694
Bme1390I CCNGG 1 cut(s) 157
Bme18I GGWCC 1 cut(s) 325
BmeT110I CYCGRG 2 cut(s) 42, 120
BmgBI CACGTC 3 cut(s) 523, 646, 1355
BmgT120I GGNCC 1 cut(s) 325
BmiI GGNNCC 3 cut(s) 196, 900, 1281
BmrFI CCNGG 1 cut(s) 157
BmrI ACTGGG 2 cut(s) 873, 1296
BmsI GCATC 2 cut(s) 1308, 1358
BmuI ACTGGG 2 cut(s) 873, 1296
BpiI GAAGAC 1 cut(s) 214
BpmI CTGGAG 2 cut(s) 139, 672
Bpu10I CCTNAGC 1 cut(s) 132
BsaBI GATNNNNATC 1 cut(s) 718
BsaHI GRCGYC 2 cut(s) 92, 195
BsaJI CCNNGG 3 cut(s) 677, 858, 1435
BsaWI WCCGGW 2 cut(s) 14, 797
Bsc4I CCNNNNNNNGG 2 cut(s) 47, 1172
Bse1I ACTGG 2 cut(s) 879, 1291
Bse8I GATNNNNATC 1 cut(s) 718
BseBI CCWGG 1 cut(s) 157
BseDI CCNNGG 3 cut(s) 677, 858, 1435
BseGI GGATG 4 cut(s) 295, 463, 776, 1299
BseJI GATNNNNATC 1 cut(s) 718
BseLI CCNNNNNNNGG 2 cut(s) 47, 1172
BseMII CTCAG 5 cut(s) 146, 323, 376, 1017, 1458
BseNI ACTGG 2 cut(s) 879, 1291
BseRI GAGGAG 5 cut(s) 120, 263, 593, 1124, 1155
BseSI GKGCMC 1 cut(s) 340
BseXI GCAGC 2 cut(s) 397, 679
BseYI CCCAGC 2 cut(s) 339, 467
BshFI GGCC 1 cut(s) 650
BshNI GGYRCC 1 cut(s) 194
BsiHKAI GWGCWC 3 cut(s) 670, 1000, 1032
BsiHKCI CYCGRG 2 cut(s) 42, 120
BsiSI CCGG 5 cut(s) 15, 27, 192, 198, 798
BslFI GGGAC 3 cut(s) 458, 754, 861
BslI CCNNNNNNNGG 2 cut(s) 47, 1172
BsmAI GTCTC 3 cut(s) 16, 482, 1106
BsmBI CGTCTC 2 cut(s) 16, 482
BsmFI GGGAC 3 cut(s) 458, 754, 861
BsmI GAATGC 2 cut(s) 351, 967
BsnI GGCC 1 cut(s) 650
BsoBI CYCGRG 2 cut(s) 42, 120
Bsp1286I GDGCHC 4 cut(s) 340, 670, 1000, 1032
Bsp19I CCATGG 1 cut(s) 677
BspACI CCGC 5 cut(s) 24, 78, 174, 1161, 1392
BspANI GGCC 1 cut(s) 650
BspCNI CTCAG 5 cut(s) 145, 324, 375, 1018, 1457
BspHI TCATGA 1 cut(s) 496
BspLI GGNNCC 3 cut(s) 196, 900, 1281
BspMI ACCTGC 1 cut(s) 23
BspPI GGATC 8 cut(s) 111, 119, 158, 601, 640, 691, 1274, 1287
BspT107I GGYRCC 1 cut(s) 194
BsrBI CCGCTC 1 cut(s) 1163
BsrI ACTGG 2 cut(s) 879, 1291
BssECI CCNNGG 3 cut(s) 677, 858, 1435
BssNI GRCGYC 2 cut(s) 92, 195
BssSI CACGAG 1 cut(s) 1092
BssT1I CCWWGG 2 cut(s) 677, 1435
Bst2BI CACGAG 1 cut(s) 1092
Bst2UI CCWGG 1 cut(s) 157
Bst4CI ACNGT 1 cut(s) 1370
Bst6I CTCTTC 3 cut(s) 238, 315, 411
BstACI GRCGYC 2 cut(s) 92, 195
BstC8I GCNNGC 2 cut(s) 178, 666
BstDEI CTNAG 6 cut(s) 132, 332, 362, 369, 1026, 1444
BstDSI CCRYGG 1 cut(s) 677
BstF5I GGATG 4 cut(s) 295, 463, 776, 1299
BstH2I RGCGCY 3 cut(s) 106, 198, 762
BstHHI GCGC 4 cut(s) 105, 197, 761, 1349
BstMAI GTCTC 3 cut(s) 16, 482, 1106
BstMWI GCNNNNNNNGC 8 cut(s) 29, 100, 194, 394, 971, 1055, 1259, 1268
BstNI CCWGG 1 cut(s) 157
BstSCI CCNGG 1 cut(s) 155
BstSFI CTRYAG 2 cut(s) 1182, 1450
BstSLI GKGCMC 1 cut(s) 340
BstV1I GCAGC 2 cut(s) 397, 679
BstV2I GAAGAC 1 cut(s) 214
BstX2I RGATCY 6 cut(s) 116, 124, 150, 683, 1088, 1279
BstYI RGATCY 6 cut(s) 116, 124, 150, 683, 1088, 1279
BsuRI GGCC 1 cut(s) 650
BtgI CCRYGG 1 cut(s) 677
BtrI CACGTC 3 cut(s) 523, 646, 1355
BtsCI GGATG 4 cut(s) 295, 463, 776, 1299
BveI ACCTGC 1 cut(s) 23
Cac8I GCNNGC 2 cut(s) 178, 666
CciI TCATGA 1 cut(s) 496
CfoI GCGC 4 cut(s) 105, 197, 761, 1349
Cfr13I GGNCC 1 cut(s) 325
CseI GACGC 3 cut(s) 81, 100, 460
Csp6I GTAC 1 cut(s) 977
CviAII CATG 4 cut(s) 497, 556, 678, 813
CviQI GTAC 1 cut(s) 977
DdeI CTNAG 6 cut(s) 132, 332, 362, 369, 1026, 1444
DinI GGCGCC 1 cut(s) 196
EaeI YGGCCR 1 cut(s) 648
Eam1104I CTCTTC 3 cut(s) 238, 315, 411
EarI CTCTTC 3 cut(s) 238, 315, 411
Ecl136II GAGCTC 2 cut(s) 668, 998
Eco130I CCWWGG 2 cut(s) 677, 1435
Eco24I GRGCYC 2 cut(s) 670, 1000
Eco32I GATATC 1 cut(s) 439
Eco47I GGWCC 1 cut(s) 325
Eco47III AGCGCT 1 cut(s) 760
Eco53kI GAGCTC 2 cut(s) 668, 998
Eco57I CTGAAG 4 cut(s) 252, 339, 639, 1167
Eco88I CYCGRG 2 cut(s) 42, 120
EcoICRI GAGCTC 2 cut(s) 668, 998
EcoO109I RGGNCCY 1 cut(s) 325
EcoRII CCWGG 1 cut(s) 155
EcoRV GATATC 1 cut(s) 439
EcoT14I CCWWGG 2 cut(s) 677, 1435
EcoT38I GRGCYC 2 cut(s) 670, 1000
EgeI GGCGCC 1 cut(s) 196
EheI GGCGCC 1 cut(s) 196
ErhI CCWWGG 2 cut(s) 677, 1435
Esp3I CGTCTC 2 cut(s) 16, 482
FaeI CATG 4 cut(s) 500, 559, 681, 816
FalI AAGNNNNNCTT 2 cut(s) 312, 344
FaqI GGGAC 3 cut(s) 458, 754, 861
FatI CATG 4 cut(s) 496, 555, 677, 812
FauI CCCGC 1 cut(s) 181
FbaI TGATCA 1 cut(s) 1198
Fnu4HI GCNGC 3 cut(s) 24, 386, 693
FokI GGATG 4 cut(s) 302, 450, 763, 1286
FriOI GRGCYC 2 cut(s) 670, 1000
Fsp4HI GCNGC 3 cut(s) 24, 386, 693
FspBI CTAG 4 cut(s) 144, 450, 1086, 1389
GlaI GCGC 4 cut(s) 104, 196, 760, 1348
GluI GCNGC 3 cut(s) 24, 386, 693
GsaI CCCAGC 2 cut(s) 343, 471
GsuI CTGGAG 2 cut(s) 139, 672
HaeII RGCGCY 3 cut(s) 106, 198, 762
HaeIII GGCC 1 cut(s) 650
HapII CCGG 5 cut(s) 15, 27, 192, 198, 798
HgaI GACGC 3 cut(s) 81, 100, 460
HhaI GCGC 4 cut(s) 105, 197, 761, 1349
Hin1I GRCGYC 2 cut(s) 92, 195
Hin1II CATG 4 cut(s) 500, 559, 681, 816
Hin6I GCGC 4 cut(s) 103, 195, 759, 1347
HinP1I GCGC 4 cut(s) 103, 195, 759, 1347
HincII GTYRAC 1 cut(s) 1407
HindII GTYRAC 1 cut(s) 1407
HinfI GANTC 7 cut(s) 5, 45, 230, 260, 360, 493, 1134
HpaII CCGG 5 cut(s) 15, 27, 192, 198, 798
HphI GGTGA 5 cut(s) 293, 434, 545, 708, 1377
Hpy166II GTNNAC 3 cut(s) 166, 643, 1407
Hpy188III TCNNGA 7 cut(s) 88, 120, 308, 497, 591, 824, 1202
Hpy8I GTNNAC 3 cut(s) 166, 643, 1407
Hpy99I CGWCG 3 cut(s) 75, 221, 524
HpyAV CCTTC 3 cut(s) 338, 758, 1395
HpyCH4III ACNGT 1 cut(s) 1370
HpyCH4IV ACGT 3 cut(s) 522, 645, 1354
HpyCH4V TGCA 4 cut(s) 397, 410, 736, 1299
HpyF10VI GCNNNNNNNGC 8 cut(s) 29, 100, 194, 394, 971, 1055, 1259, 1268
HpyF3I CTNAG 6 cut(s) 132, 332, 362, 369, 1026, 1444
HpySE526I ACGT 3 cut(s) 522, 645, 1354
Hsp92I GRCGYC 2 cut(s) 92, 195
Hsp92II CATG 4 cut(s) 500, 559, 681, 816
HspAI GCGC 4 cut(s) 103, 195, 759, 1347
KasI GGCGCC 1 cut(s) 194
Ksp22I TGATCA 1 cut(s) 1198
LmnI GCTCC 3 cut(s) 29, 971, 1168
Lsp1109I GCAGC 2 cut(s) 397, 679
LweI GCATC 2 cut(s) 1308, 1358
MaeI CTAG 4 cut(s) 144, 450, 1086, 1389
MaeII ACGT 3 cut(s) 522, 645, 1354
MaeIII GTNAC 1 cut(s) 17
MbiI CCGCTC 1 cut(s) 1163
MflI RGATCY 6 cut(s) 116, 124, 150, 683, 1088, 1279
MhlI GDGCHC 4 cut(s) 340, 670, 1000, 1032
MlsI TGGCCA 1 cut(s) 650
MluCI AATT 7 cut(s) 57, 183, 203, 378, 700, 831, 1006
MluNI TGGCCA 1 cut(s) 650
Mly113I GGCGCC 1 cut(s) 195
MlyI GAGTC 5 cut(s) 54, 224, 354, 502, 1143
MmeI TCCRAC 4 cut(s) 128, 252, 555, 1243
Mox20I TGGCCA 1 cut(s) 650
MroXI GAANNNNTTC 2 cut(s) 769, 949
MscI TGGCCA 1 cut(s) 650
MseI TTAA 2 cut(s) 431, 870
Msp20I TGGCCA 1 cut(s) 650
MspA1I CMGCKG 3 cut(s) 80, 551, 692
MspI CCGG 5 cut(s) 15, 27, 192, 198, 798
MspR9I CCNGG 1 cut(s) 157
Mva1269I GAATGC 2 cut(s) 351, 967
MvaI CCWGG 1 cut(s) 157
MwoI GCNNNNNNNGC 8 cut(s) 29, 100, 194, 394, 971, 1055, 1259, 1268
NarI GGCGCC 1 cut(s) 195
NcoI CCATGG 1 cut(s) 677
NlaIII CATG 4 cut(s) 500, 559, 681, 816
NlaIV GGNNCC 3 cut(s) 196, 900, 1281
PaeR7I CTCGAG 1 cut(s) 42
PagI TCATGA 1 cut(s) 496
PcsI WCGNNNNNNNCGW 1 cut(s) 225
PctI GAATGC 2 cut(s) 351, 967
PdmI GAANNNNTTC 2 cut(s) 769, 949
PfeI GAWTC 2 cut(s) 5, 260
PkrI GCNGC 3 cut(s) 25, 387, 694
PleI GAGTC 5 cut(s) 53, 224, 354, 501, 1142
PluTI GGCGCC 1 cut(s) 198
PpsI GAGTC 5 cut(s) 53, 224, 354, 501, 1142
PpuMI RGGWCCY 1 cut(s) 325
Psp124BI GAGCTC 2 cut(s) 670, 1000
Psp5II RGGWCCY 1 cut(s) 325
Psp6I CCWGG 1 cut(s) 155
PspFI CCCAGC 2 cut(s) 339, 467
PspGI CCWGG 1 cut(s) 155
PspN4I GGNNCC 3 cut(s) 196, 900, 1281
PspPI GGNCC 1 cut(s) 325
PspPPI RGGWCCY 1 cut(s) 325
PspXI VCTCGAGB 1 cut(s) 42
PsuI RGATCY 6 cut(s) 116, 124, 150, 683, 1088, 1279
PvuII CAGCTG 2 cut(s) 551, 692
RsaI GTAC 1 cut(s) 978
RsaNI GTAC 1 cut(s) 977
SacI GAGCTC 2 cut(s) 670, 1000
SaqAI TTAA 2 cut(s) 431, 870
SatI GCNGC 3 cut(s) 24, 386, 693
Sau96I GGNCC 1 cut(s) 325
SchI GAGTC 5 cut(s) 54, 224, 354, 502, 1143
ScrFI CCNGG 1 cut(s) 157
SduI GDGCHC 4 cut(s) 340, 670, 1000, 1032
SfaNI GCATC 2 cut(s) 1308, 1358
SfcI CTRYAG 2 cut(s) 1182, 1450
SfoI GGCGCC 1 cut(s) 196
Sfr274I CTCGAG 1 cut(s) 42
SinI GGWCC 1 cut(s) 325
SlaI CTCGAG 1 cut(s) 42
SmlI CTYRAG 1 cut(s) 42
SmoI CTYRAG 1 cut(s) 42
Sse9I AATT 7 cut(s) 57, 183, 203, 378, 700, 831, 1006
SsiI CCGC 5 cut(s) 24, 78, 174, 1161, 1392
SspDI GGCGCC 1 cut(s) 194
SspI AATATT 1 cut(s) 820
SspMI CTAG 4 cut(s) 144, 450, 1086, 1389
SstI GAGCTC 2 cut(s) 670, 1000
StyD4I CCNGG 1 cut(s) 155
StyI CCWWGG 2 cut(s) 677, 1435
TaaI ACNGT 1 cut(s) 1370
TaiI ACGT 3 cut(s) 525, 648, 1357
TaqI TCGA 3 cut(s) 43, 64, 712
TasI AATT 7 cut(s) 57, 183, 203, 378, 700, 831, 1006
TauI GCSGC 1 cut(s) 26
TfiI GAWTC 2 cut(s) 5, 260
Tru1I TTAA 2 cut(s) 431, 870
Tru9I TTAA 2 cut(s) 431, 870
TseI GCWGC 2 cut(s) 385, 692
TspDTI ATGAA 6 cut(s) 196, 252, 843, 999, 1353, 1371
TspGWI ACGGA 3 cut(s) 205, 994, 1058
VpaK11BI GGWCC 1 cut(s) 325
XapI RAATTY 3 cut(s) 203, 831, 1006
XhoI CTCGAG 1 cut(s) 42
XmnI GAANNNNTTC 2 cut(s) 769, 949
XspI CTAG 4 cut(s) 144, 450, 1086, 1389
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.