Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0007306

Physical Location & Seq

Genomic Coordinates Forward (+)

48789993 .. 48793495

Gene Structure 3503 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0336000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1494 bp

ATGCTCAGAAACCTCCGCCGTCTCTGCTCTCGTCTCCGGTGGCCGTCCCGCCGCCGGTCCCGGAACAAAGTCGTCATCAAACGGTTCTGGAAAACGAACTCCAAGTCCCAATTCGAGCACGAACCCACTTCCAACGGCTCGTCGTCGGCGACGGTTCACCCGAACGGCCAGCTGGGCGGGTCGGAAACTGAGAAGTCCAGGCCTATTCGGGTCGCCACTTTCAACGCCGCCCTGTTCTCAATGGCGCCGGCGATTCCGACGCCGGAGAAAATCGAGCAAGACGAAAATGGCGTCAAGGTCGTAAAGAACATAAATTCCAGAGCCAAATCGGCGACTGACCGACCCAAGAGTATCTTAAAGCAGTCGCCTTTACACCCAAATTTGATGAACAACTCAGAGAATCAAAAAACCCAACAGAAATTCGTCAAATCCAAGTTGAGGGTATCGATCAATTTGCCGGATAACGAAATCTCATTACTGAAAAGCAGACAGTTGAGCTTTGCTGAAGGGAGAGAAGTTGATGATTCTTCATCTTCTTTTTCCCCAAGTAGAGTTTCAAGAGGAAAAAGTCCATTGAAGCCTAGTGTGAGCTTTCCTAATAATATCGGGAACGGTGGTGGTGGTGGTGATGGAGATTACTGTAGAAGCCACAGGACTGTTCTTGAGGTTCTGAGAGAATTGGATGCTGACATTTTGGCTCTGCAAGATGTGAAAGCAGAGGAGGAGAAGGAAATGAAGCCTCTTTCGGATTTGGCCGCCGCTTTGGGGATGAACTATGTCTTCGCCGAGAGTTGGGCGCCGGAGTACGGCAACGCCATCTTGTCCAAATGGCCGATAAAGCGGTCTAAGGTTCAGAAAATCTTTGATGACACTGATTTCAGGAACGTTCTAAAAGCCACCATTGACGTACCCCAAGCCGGAGAAGTCAACTTCCACTGCACCCACCTTGATCATCTTGATGAGAACTGGAGGATGAGGCAGATTAACGCTATAATCCAATCGAGCAATGAGCCTCACATCTTGGCTGGAGGTCTAAATTCACTAGAGGAATCGGATTATTCTCAAGAAAGATGGACTGACATTGTAAAGTATTATGAGGAGATGGGAAAACCAACACCTAAGGTCGAAGTAATGAGATACTTGAAGAGCAAGCAGTATACAGATGCCAAGGACTTTGAAGGAGAATATGAGTCGGTAGTTATGATTGCCAAAGGCCAAAGTGTGCAGGGGACATGCAAGTATGGAACACGGGTAGATTACATATTGGCGTCCTCAAATTCGCCCTACAAGTTTGTTCCCGGGTCATACTCTGTCTTCTCATCCAAAGGGACATCTGATCATCATATCGTAAGAGTTGATGTGATCAAATCGTATAGTGGTTGTGATCCAGGAAATGTCTCCAGACGAGGGCAACGGAAACAGAAAGTTATAAAGATATCGGAGACTACTCCATCAAAAGGCATATGGAAAACAGAGATAAGATCAGAAGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0015934 GO:0019219 GO:0019222 GO:0022613 GO:0022625 GO:0022626 GO:0030684 GO:0030687 GO:0031323 GO:0031326 GO:0032991 GO:0042254 GO:0042273 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044085 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0071840 GO:0080090 GO:0140110 GO:1903506 GO:1990904 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C2H2_2 zf-C2H2_jaz zf-met

Protein Analysis

497

Amino Acids

55.85

Weight (kDa)

9.45

Isoelectric Point (pI)

53.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exo_endo_phos	PF03372	212 - 447	6.5e-13	Endonuclease/Exonuclease/phosphatase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007306)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31430 AT4G31430 AT4G31430
fragaria_vesca	FvH4_2g36900
malus_domestica	MD00G1205700.v1.1 MD08G1130500.v1.1 MD15G1108600.v1.1
prunus_persica	Prupe.1G460900_v2.0.a1 Prupe.1G460900_v2.0.a1 Prupe.1G460900_v2.0.a1 Prupe.1G460900_v2.0.a1 Prupe.1G460900_v2.0.a1 Prupe.1G460900_v2.0.a1
pyrus_communis	pycom08g10960 pycom15g09920
rosa_chinensis	RchiOBHm_Chr6g0304881
rosa_laevigata	RLG00000010942
rosa_multiflora	Rmu_ssc0000278.1_g000005
rosa_roxburghii	Rroxscaffold_7G00163380
rosa_rugosa	Rorug06G0336000
rosa_samantha	Rh6AG447200 Rh6BG454300 Rh6CG460700 Rh6DG447700
rosa_wichuraiana	Rw6G038930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1430
AccB1I	GGYRCC	2 cut(s)	244, 796
AccI	GTMKAC	1 cut(s)	1157
AciI	CCGC	8 cut(s)	16, 49, 52, 177, 228, 756, 759, 841
AclI	AACGTT	1 cut(s)	885
AclWI	GGATC	1 cut(s)	1379
AcoI	YGGCCR	4 cut(s)	41, 166, 753, 830
AcsI	RAATTY	5 cut(s)	313, 379, 419, 1036, 1276
AcuI	CTGAAG	1 cut(s)	525
AcyI	GRCGYC	5 cut(s)	245, 260, 291, 797, 1268
AfaI	GTAC	2 cut(s)	806, 909
AfiI	CCNNNNNNNGG	8 cut(s)	54, 438, 765, 792, 806, 917, 1407, 1457
AgsI	TTSAA	5 cut(s)	223, 558, 577, 1144, 1178
AjnI	CCWGG	2 cut(s)	197, 1387
AjuI	GAANNNNNNNTTGG	4 cut(s)	95, 127, 538, 570
AloI	GAACNNNNNNTCC	4 cut(s)	89, 121, 299, 331
AluBI	AGCT	3 cut(s)	172, 498, 591
AluI	AGCT	3 cut(s)	172, 498, 591
Alw21I	GWGCWC	1 cut(s)	120
Alw26I	GTCTC	4 cut(s)	26, 38, 1402, 1436
AlwI	GGATC	1 cut(s)	1379
Ama87I	CYCGRG	1 cut(s)	1298
AoxI	GGCC	6 cut(s)	41, 166, 200, 753, 830, 1213
ApoI	RAATTY	5 cut(s)	313, 379, 419, 1036, 1276
ArsI	GACNNNNNNTTYG	4 cut(s)	89, 121, 276, 308
AspLEI	GCGC	2 cut(s)	247, 799
AspS9I	GGNCC	1 cut(s)	57
AsuC2I	CCSGG	3 cut(s)	61, 1299, 1300
AsuHPI	GGTGA	2 cut(s)	149, 638
AvaI	CYCGRG	1 cut(s)	1298
AvaII	GGWCC	1 cut(s)	57
AxyI	CCTNAGG	1 cut(s)	1119
BanI	GGYRCC	2 cut(s)	244, 796
BbsI	GAAGAC	2 cut(s)	772, 1306
Bbv12I	GWGCWC	1 cut(s)	120
BccI	CCATC	5 cut(s)	623, 824, 1065, 1096, 1459
BceAI	ACGGC	5 cut(s)	3, 28, 151, 181, 823
BcgI	CGANNNNNNTGC	2 cut(s)	436, 470
BciT130I	CCWGG	2 cut(s)	199, 1389
BclI	TGATCA	3 cut(s)	949, 1336, 1362
BcnI	CCSGG	3 cut(s)	61, 1299, 1300
BcoDI	GTCTC	4 cut(s)	26, 38, 1402, 1436
BfaI	CTAG	2 cut(s)	582, 1043
BfmI	CTRYAG	1 cut(s)	640
BfoI	RGCGCY	2 cut(s)	248, 800
BglI	GCCNNNNNGGC	2 cut(s)	174, 329
BisI	GCNGC	4 cut(s)	52, 228, 756, 759
BlsI	GCNGC	4 cut(s)	53, 229, 757, 760
Bme1390I	CCNGG	5 cut(s)	61, 199, 1299, 1300, 1389
Bme18I	GGWCC	1 cut(s)	57
BmeT110I	CYCGRG	1 cut(s)	1298
BmgT120I	GGNCC	1 cut(s)	57
BmiI	GGNNCC	3 cut(s)	59, 246, 798
BmrFI	CCNGG	5 cut(s)	61, 199, 1299, 1300, 1389
BmsI	GCATC	2 cut(s)	673, 1153
BpiI	GAAGAC	2 cut(s)	772, 1306
BpmI	CTGGAG	3 cut(s)	988, 1047, 1384
BpuEI	CTTGAG	2 cut(s)	683, 1047
BpuMI	CCSGG	3 cut(s)	61, 1299, 1300
Bsa29I	ATCGAT	1 cut(s)	446
BsaHI	GRCGYC	5 cut(s)	245, 260, 291, 797, 1268
BsaJI	CCNNGG	2 cut(s)	1167, 1298
BsaWI	WCCGGW	1 cut(s)	36
Bsc4I	CCNNNNNNNGG	8 cut(s)	54, 438, 765, 792, 806, 917, 1407, 1457
Bse118I	RCCGGY	2 cut(s)	54, 247
Bse1I	ACTGG	1 cut(s)	971
Bse21I	CCTNAGG	1 cut(s)	1119
Bse3DI	GCAATG	1 cut(s)	1012
BseBI	CCWGG	2 cut(s)	199, 1389
BseCI	ATCGAT	1 cut(s)	446
BseDI	CCNNGG	2 cut(s)	1167, 1298
BseGI	GGATG	4 cut(s)	688, 774, 978, 1319
BseLI	CCNNNNNNNGG	8 cut(s)	54, 438, 765, 792, 806, 917, 1407, 1457
BseMI	GCAATG	1 cut(s)	1012
BseMII	CTCAG	4 cut(s)	19, 180, 408, 662
BseNI	ACTGG	1 cut(s)	971
BseRI	GAGGAG	3 cut(s)	734, 737, 1112
BseYI	CCCAGC	1 cut(s)	172
BsgI	GTGCAG	2 cut(s)	922, 1244
BshFI	GGCC	6 cut(s)	43, 168, 202, 755, 832, 1215
BshNI	GGYRCC	2 cut(s)	244, 796
BshVI	ATCGAT	1 cut(s)	446
BsiHKAI	GWGCWC	1 cut(s)	120
BsiHKCI	CYCGRG	1 cut(s)	1298
BsiSI	CCGG	9 cut(s)	37, 55, 61, 248, 263, 458, 800, 918, 1299
BslFI	GGGAC	5 cut(s)	31, 43, 91, 1243, 1342
BslI	CCNNNNNNNGG	8 cut(s)	54, 438, 765, 792, 806, 917, 1407, 1457
BsmAI	GTCTC	4 cut(s)	26, 38, 1402, 1436
BsmBI	CGTCTC	2 cut(s)	26, 38
BsmFI	GGGAC	5 cut(s)	31, 43, 91, 1243, 1342
BsnI	GGCC	6 cut(s)	43, 168, 202, 755, 832, 1215
BsoBI	CYCGRG	1 cut(s)	1298
Bsp1286I	GDGCHC	1 cut(s)	120
Bsp143I	GATC	6 cut(s)	447, 949, 1336, 1362, 1384, 1481
BspACI	CCGC	8 cut(s)	16, 49, 52, 177, 228, 756, 759, 841
BspANI	GGCC	6 cut(s)	43, 168, 202, 755, 832, 1215
BspCNI	CTCAG	4 cut(s)	18, 181, 407, 663
BspDI	ATCGAT	1 cut(s)	446
BspLI	GGNNCC	3 cut(s)	59, 246, 798
BspPI	GGATC	1 cut(s)	1379
BspQI	GCTCTTC	1 cut(s)	1139
BspT107I	GGYRCC	2 cut(s)	244, 796
BsrDI	GCAATG	1 cut(s)	1012
BsrFI	RCCGGY	2 cut(s)	54, 247
BsrI	ACTGG	1 cut(s)	971
BssAI	RCCGGY	2 cut(s)	54, 247
BssECI	CCNNGG	2 cut(s)	1167, 1298
BssMI	GATC	6 cut(s)	447, 949, 1336, 1362, 1384, 1481
BssNAI	GTATAC	1 cut(s)	1158
BssNI	GRCGYC	5 cut(s)	245, 260, 291, 797, 1268
BssT1I	CCWWGG	1 cut(s)	1167
Bst1107I	GTATAC	1 cut(s)	1158
Bst2UI	CCWGG	2 cut(s)	199, 1389
Bst4CI	ACNGT	6 cut(s)	84, 154, 492, 614, 641, 658
Bst6I	CTCTTC	1 cut(s)	1139
BstACI	GRCGYC	5 cut(s)	245, 260, 291, 797, 1268
BstC8I	GCNNGC	3 cut(s)	170, 249, 1151
BstDEI	CTNAG	6 cut(s)	5, 189, 394, 671, 846, 1119
BstF5I	GGATG	4 cut(s)	688, 774, 978, 1319
BstH2I	RGCGCY	2 cut(s)	248, 800
BstHHI	GCGC	2 cut(s)	247, 799
BstKTI	GATC	6 cut(s)	450, 952, 1339, 1365, 1387, 1484
BstMAI	GTCTC	4 cut(s)	26, 38, 1402, 1436
BstMBI	GATC	6 cut(s)	447, 949, 1336, 1362, 1384, 1481
BstMWI	GCNNNNNNNGC	4 cut(s)	24, 174, 329, 838
BstNI	CCWGG	2 cut(s)	199, 1389
BstNSI	RCATGY	1 cut(s)	1236
BstSCI	CCNGG	5 cut(s)	59, 197, 1297, 1298, 1387
BstSFI	CTRYAG	1 cut(s)	640
BstV2I	GAAGAC	2 cut(s)	772, 1306
BstZ17I	GTATAC	1 cut(s)	1158
Bsu15I	ATCGAT	1 cut(s)	446
Bsu36I	CCTNAGG	1 cut(s)	1119
BsuRI	GGCC	6 cut(s)	43, 168, 202, 755, 832, 1215
BsuTUI	ATCGAT	1 cut(s)	446
BtsCI	GGATG	4 cut(s)	688, 774, 978, 1319
BtsI	GCAGTG	1 cut(s)	934
BtsIMutI	CAGTG	2 cut(s)	870, 934
Cac8I	GCNNGC	3 cut(s)	170, 249, 1151
CfoI	GCGC	2 cut(s)	247, 799
Cfr10I	RCCGGY	2 cut(s)	54, 247
Cfr13I	GGNCC	1 cut(s)	57
Cfr9I	CCCGGG	1 cut(s)	1298
ClaI	ATCGAT	1 cut(s)	446
CseI	GACGC	3 cut(s)	268, 280, 1257
Csp6I	GTAC	2 cut(s)	805, 908
CviAII	CATG	1 cut(s)	1233
CviQI	GTAC	2 cut(s)	805, 908
DdeI	CTNAG	6 cut(s)	5, 189, 394, 671, 846, 1119
DinI	GGCGCC	2 cut(s)	246, 798
DpnI	GATC	6 cut(s)	449, 951, 1338, 1364, 1386, 1483
DpnII	GATC	6 cut(s)	447, 949, 1336, 1362, 1384, 1481
EaeI	YGGCCR	4 cut(s)	41, 166, 753, 830
Eam1104I	CTCTTC	1 cut(s)	1139
EarI	CTCTTC	1 cut(s)	1139
EciI	GGCGGA	1 cut(s)	5
Eco130I	CCWWGG	1 cut(s)	1167
Eco147I	AGGCCT	1 cut(s)	202
Eco32I	GATATC	1 cut(s)	1437
Eco47I	GGWCC	1 cut(s)	57
Eco57I	CTGAAG	1 cut(s)	525
Eco81I	CCTNAGG	1 cut(s)	1119
Eco88I	CYCGRG	1 cut(s)	1298
EcoRII	CCWGG	2 cut(s)	197, 1387
EcoRV	GATATC	1 cut(s)	1437
EcoT14I	CCWWGG	1 cut(s)	1167
EgeI	GGCGCC	2 cut(s)	246, 798
EheI	GGCGCC	2 cut(s)	246, 798
ErhI	CCWWGG	1 cut(s)	1167
Esp3I	CGTCTC	2 cut(s)	26, 38
FaeI	CATG	1 cut(s)	1236
FalI	AAGNNNNNCTT	2 cut(s)	338, 370
FaqI	GGGAC	5 cut(s)	31, 43, 91, 1243, 1342
FatI	CATG	1 cut(s)	1232
FauI	CCCGC	2 cut(s)	56, 170
FauNDI	CATATG	1 cut(s)	1463
FbaI	TGATCA	3 cut(s)	949, 1336, 1362
FblI	GTMKAC	1 cut(s)	1157
Fnu4HI	GCNGC	4 cut(s)	52, 228, 756, 759
FokI	GGATG	4 cut(s)	695, 781, 985, 1306
Fsp4HI	GCNGC	4 cut(s)	52, 228, 756, 759
FspBI	CTAG	2 cut(s)	582, 1043
GlaI	GCGC	2 cut(s)	246, 798
GluI	GCNGC	4 cut(s)	52, 228, 756, 759
GsaI	CCCAGC	1 cut(s)	176
GsuI	CTGGAG	3 cut(s)	988, 1047, 1384
HaeII	RGCGCY	2 cut(s)	248, 800
HaeIII	GGCC	6 cut(s)	43, 168, 202, 755, 832, 1215
HapII	CCGG	9 cut(s)	37, 55, 61, 248, 263, 458, 800, 918, 1299
HgaI	GACGC	3 cut(s)	268, 280, 1257
HhaI	GCGC	2 cut(s)	247, 799
Hin1I	GRCGYC	5 cut(s)	245, 260, 291, 797, 1268
Hin1II	CATG	1 cut(s)	1236
Hin6I	GCGC	2 cut(s)	245, 797
HinP1I	GCGC	2 cut(s)	245, 797
HincII	GTYRAC	1 cut(s)	928
HindII	GTYRAC	1 cut(s)	928
HinfI	GANTC	5 cut(s)	253, 400, 524, 1049, 1190
HpaII	CCGG	9 cut(s)	37, 55, 61, 248, 263, 458, 800, 918, 1299
HphI	GGTGA	2 cut(s)	149, 638
Hpy166II	GTNNAC	3 cut(s)	157, 928, 1158
Hpy188III	TCNNGA	9 cut(s)	88, 318, 558, 607, 662, 880, 956, 1064, 1401
Hpy8I	GTNNAC	3 cut(s)	157, 928, 1158
Hpy99I	CGWCG	4 cut(s)	145, 148, 154, 262
HpyAV	CCTTC	4 cut(s)	500, 721, 1172, 1481
HpyCH4III	ACNGT	6 cut(s)	84, 154, 492, 614, 641, 658
HpyCH4IV	ACGT	2 cut(s)	885, 906
HpyCH4V	TGCA	4 cut(s)	703, 939, 1225, 1236
HpyF10VI	GCNNNNNNNGC	4 cut(s)	24, 174, 329, 838
HpyF3I	CTNAG	6 cut(s)	5, 189, 394, 671, 846, 1119
HpySE526I	ACGT	2 cut(s)	885, 906
Hsp92I	GRCGYC	5 cut(s)	245, 260, 291, 797, 1268
Hsp92II	CATG	1 cut(s)	1236
HspAI	GCGC	2 cut(s)	245, 797
KasI	GGCGCC	2 cut(s)	244, 796
KroI	GCCGGC	1 cut(s)	247
KroNI	GCCGGC	1 cut(s)	249
Ksp22I	TGATCA	3 cut(s)	949, 1336, 1362
Kzo9I	GATC	6 cut(s)	447, 949, 1336, 1362, 1384, 1481
LguI	GCTCTTC	1 cut(s)	1139
LweI	GCATC	2 cut(s)	673, 1153
MaeI	CTAG	2 cut(s)	582, 1043
MaeII	ACGT	2 cut(s)	885, 906
MalI	GATC	6 cut(s)	449, 951, 1338, 1364, 1386, 1483
MboI	GATC	6 cut(s)	447, 949, 1336, 1362, 1384, 1481
MboII	GAAGA	5 cut(s)	519, 525, 772, 1156, 1306
MhlI	GDGCHC	1 cut(s)	120
MluCI	AATT	8 cut(s)	110, 313, 379, 419, 451, 677, 1036, 1276
Mly113I	GGCGCC	2 cut(s)	245, 797
MlyI	GAGTC	1 cut(s)	1199
MmeI	TCCRAC	3 cut(s)	156, 162, 281
MreI	CGCCGGCG	1 cut(s)	247
MroNI	GCCGGC	1 cut(s)	247
MseI	TTAA	2 cut(s)	356, 984
MslI	CAYNNNNRTG	1 cut(s)	957
MspA1I	CMGCKG	1 cut(s)	172
MspI	CCGG	9 cut(s)	37, 55, 61, 248, 263, 458, 800, 918, 1299
MspR9I	CCNGG	5 cut(s)	61, 199, 1299, 1300, 1389
MvaI	CCWGG	2 cut(s)	199, 1389
MwoI	GCNNNNNNNGC	4 cut(s)	24, 174, 329, 838
NaeI	GCCGGC	1 cut(s)	249
NarI	GGCGCC	2 cut(s)	245, 797
NciI	CCSGG	3 cut(s)	61, 1299, 1300
NdeI	CATATG	1 cut(s)	1463
NdeII	GATC	6 cut(s)	447, 949, 1336, 1362, 1384, 1481
NgoMIV	GCCGGC	1 cut(s)	247
NlaIII	CATG	1 cut(s)	1236
NlaIV	GGNNCC	3 cut(s)	59, 246, 798
NmeAIII	GCCGAG	1 cut(s)	811
NspI	RCATGY	1 cut(s)	1236
PceI	AGGCCT	1 cut(s)	202
PciSI	GCTCTTC	1 cut(s)	1139
PcsI	WCGNNNNNNNCGW	4 cut(s)	146, 158, 279, 288
PdiI	GCCGGC	1 cut(s)	249
PfeI	GAWTC	4 cut(s)	253, 400, 524, 1049
PfoI	TCCNGGA	2 cut(s)	59, 1387
PkrI	GCNGC	4 cut(s)	53, 229, 757, 760
PleI	GAGTC	1 cut(s)	1198
PluTI	GGCGCC	2 cut(s)	248, 800
PpsI	GAGTC	1 cut(s)	1198
PsiI	TTATAA	1 cut(s)	1430
Psp1406I	AACGTT	1 cut(s)	885
Psp6I	CCWGG	2 cut(s)	197, 1387
PspFI	CCCAGC	1 cut(s)	172
PspGI	CCWGG	2 cut(s)	197, 1387
PspN4I	GGNNCC	3 cut(s)	59, 246, 798
PspPI	GGNCC	1 cut(s)	57
PvuII	CAGCTG	1 cut(s)	172
RsaI	GTAC	2 cut(s)	806, 909
RsaNI	GTAC	2 cut(s)	805, 908
RseI	CAYNNNNRTG	1 cut(s)	957
SapI	GCTCTTC	1 cut(s)	1139
SaqAI	TTAA	2 cut(s)	356, 984
SatI	GCNGC	4 cut(s)	52, 228, 756, 759
Sau3AI	GATC	6 cut(s)	447, 949, 1336, 1362, 1384, 1481
Sau96I	GGNCC	1 cut(s)	57
SchI	GAGTC	1 cut(s)	1199
ScrFI	CCNGG	5 cut(s)	61, 199, 1299, 1300, 1389
SduI	GDGCHC	1 cut(s)	120
SfaNI	GCATC	2 cut(s)	673, 1153
SfcI	CTRYAG	1 cut(s)	640
SfoI	GGCGCC	2 cut(s)	246, 798
SgrAI	CRCCGGYG	1 cut(s)	247
SinI	GGWCC	1 cut(s)	57
SmaI	CCCGGG	1 cut(s)	1300
SmiMI	CAYNNNNRTG	1 cut(s)	957
SmlI	CTYRAG	2 cut(s)	662, 1062
SmoI	CTYRAG	2 cut(s)	662, 1062
Sse9I	AATT	8 cut(s)	110, 313, 379, 419, 451, 677, 1036, 1276
SseBI	AGGCCT	1 cut(s)	202
SsiI	CCGC	8 cut(s)	16, 49, 52, 177, 228, 756, 759, 841
SspDI	GGCGCC	2 cut(s)	244, 796
SspMI	CTAG	2 cut(s)	582, 1043
StuI	AGGCCT	1 cut(s)	202
StyD4I	CCNGG	5 cut(s)	59, 197, 1297, 1298, 1387
StyI	CCWWGG	1 cut(s)	1167
TaaI	ACNGT	6 cut(s)	84, 154, 492, 614, 641, 658
TaiI	ACGT	2 cut(s)	888, 909
TaqI	TCGA	5 cut(s)	114, 273, 446, 1001, 1125
TaqII	GACCGA	1 cut(s)	354
TasI	AATT	8 cut(s)	110, 313, 379, 419, 451, 677, 1036, 1276
TauI	GCSGC	4 cut(s)	54, 230, 758, 761
TfiI	GAWTC	4 cut(s)	253, 400, 524, 1049
Tru1I	TTAA	2 cut(s)	356, 984
Tru9I	TTAA	2 cut(s)	356, 984
TscAI	CASTG	2 cut(s)	877, 941
TspDTI	ATGAA	4 cut(s)	401, 519, 749, 785
TspGWI	ACGGA	1 cut(s)	1429
TspMI	CCCGGG	1 cut(s)	1298
TspRI	CASTG	2 cut(s)	877, 941
VpaK11BI	GGWCC	1 cut(s)	57
XapI	RAATTY	5 cut(s)	313, 379, 419, 1036, 1276
XceI	RCATGY	1 cut(s)	1236
XmaI	CCCGGG	1 cut(s)	1298
XmiI	GTMKAC	1 cut(s)	1157
XspI	CTAG	2 cut(s)	582, 1043

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.