No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G31430 AT4G31430 AT4G31430 |
| fragaria_vesca | FvH4_2g36900 |
| malus_domestica | MD00G1205700.v1.1 MD08G1130500.v1.1 MD15G1108600.v1.1 |
| prunus_persica | Prupe.1G460900_v2.0.a1 Prupe.1G460900_v2.0.a1 Prupe.1G460900_v2.0.a1 Prupe.1G460900_v2.0.a1 Prupe.1G460900_v2.0.a1 Prupe.1G460900_v2.0.a1 |
| pyrus_communis | pycom08g10960 pycom15g09920 |
| rosa_chinensis | RchiOBHm_Chr6g0304881 |
| rosa_laevigata | RLG00000010942 |
| rosa_multiflora | Rmu_ssc0000278.1_g000005 |
| rosa_roxburghii | Rroxscaffold_7G00163380 |
| rosa_rugosa | Rorug06G0336000 |
| rosa_samantha | Rh6AG447200 Rh6BG454300 Rh6CG460700 Rh6DG447700 |
| rosa_wichuraiana | Rw6G038930 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1800 |
| AccB1I | GGYRCC | 2 cut(s) | 194, 1568 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 656 |
| AccI | GTMKAC | 1 cut(s) | 827 |
| AccII | CGCG | 1 cut(s) | 1816 |
| AccIII | TCCGGA | 1 cut(s) | 1102 |
| AciI | CCGC | 8 cut(s) | 12, 54, 67, 126, 192, 706, 1116, 1816 |
| AclWI | GGATC | 4 cut(s) | 42, 598, 621, 1788 |
| AcoI | YGGCCR | 2 cut(s) | 3, 690 |
| AcsI | RAATTY | 1 cut(s) | 1285 |
| AcuI | CTGAAG | 3 cut(s) | 531, 1224, 1374 |
| AcyI | GRCGYC | 1 cut(s) | 195 |
| AdeI | CACNNNGTG | 1 cut(s) | 656 |
| AfaI | GTAC | 2 cut(s) | 80, 897 |
| AfeI | AGCGCT | 1 cut(s) | 637 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 105, 370, 447, 656, 860 |
| AgeI | ACCGGT | 1 cut(s) | 679 |
| AgsI | TTSAA | 9 cut(s) | 328, 419, 600, 787, 807, 1290, 1311, 1600, 1634 |
| AjiI | CACGTC | 1 cut(s) | 713 |
| AjnI | CCWGG | 2 cut(s) | 309, 866 |
| AluBI | AGCT | 8 cut(s) | 838, 1179, 1397, 1464, 1484, 1607, 1692, 1723 |
| AluI | AGCT | 8 cut(s) | 838, 1179, 1397, 1464, 1484, 1607, 1692, 1723 |
| Alw21I | GWGCWC | 3 cut(s) | 37, 1440, 1594 |
| Alw26I | GTCTC | 2 cut(s) | 431, 1777 |
| Alw44I | GTGCAC | 1 cut(s) | 1590 |
| AlwI | GGATC | 4 cut(s) | 42, 598, 621, 1788 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1397, 1723 |
| Ama87I | CYCGRG | 3 cut(s) | 445, 1193, 1465 |
| Aor13HI | TCCGGA | 1 cut(s) | 1102 |
| Aor51HI | AGCGCT | 1 cut(s) | 637 |
| AoxI | GGCC | 2 cut(s) | 3, 690 |
| ApaLI | GTGCAC | 1 cut(s) | 1590 |
| ApeKI | GCWGC | 2 cut(s) | 1481, 1484 |
| ApoI | RAATTY | 1 cut(s) | 1285 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1649, 1681 |
| AseI | ATTAAT | 1 cut(s) | 467 |
| AsiGI | ACCGGT | 1 cut(s) | 679 |
| AspLEI | GCGC | 2 cut(s) | 197, 638 |
| AspS9I | GGNCC | 5 cut(s) | 224, 864, 927, 954, 1618 |
| AsuC2I | CCSGG | 4 cut(s) | 157, 199, 999, 1739 |
| AsuHPI | GGTGA | 5 cut(s) | 669, 671, 1148, 1253, 1534 |
| AvaI | CYCGRG | 3 cut(s) | 445, 1193, 1465 |
| AvaII | GGWCC | 5 cut(s) | 224, 864, 927, 954, 1618 |
| BaeGI | GKGCMC | 3 cut(s) | 712, 1421, 1594 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 70, 103 |
| BalI | TGGCCA | 2 cut(s) | 5, 692 |
| BanI | GGYRCC | 2 cut(s) | 194, 1568 |
| BanII | GRGCYC | 1 cut(s) | 378 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1351, 1383 |
| BbsI | GAAGAC | 2 cut(s) | 669, 1073 |
| Bbv12I | GWGCWC | 3 cut(s) | 37, 1440, 1594 |
| BbvI | GCAGC | 2 cut(s) | 1471, 1493 |
| BccI | CCATC | 4 cut(s) | 257, 314, 1244, 1580 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1550, 1584 |
| BciT130I | CCWGG | 2 cut(s) | 311, 868 |
| BcnI | CCSGG | 4 cut(s) | 157, 199, 999, 1739 |
| BcoDI | GTCTC | 2 cut(s) | 431, 1777 |
| BfaI | CTAG | 5 cut(s) | 38, 90, 389, 1695, 1791 |
| BfmI | CTRYAG | 1 cut(s) | 1485 |
| BfoI | RGCGCY | 2 cut(s) | 198, 639 |
| BfuAI | ACCTGC | 1 cut(s) | 1800 |
| BglII | AGATCT | 3 cut(s) | 23, 755, 1489 |
| BisI | GCNGC | 6 cut(s) | 12, 55, 193, 1116, 1482, 1485 |
| BlsI | GCNGC | 6 cut(s) | 13, 56, 194, 1117, 1483, 1486 |
| Bme1390I | CCNGG | 6 cut(s) | 157, 199, 311, 868, 999, 1739 |
| Bme18I | GGWCC | 5 cut(s) | 224, 864, 927, 954, 1618 |
| BmeT110I | CYCGRG | 3 cut(s) | 445, 1193, 1465 |
| BmgBI | CACGTC | 1 cut(s) | 713 |
| BmgT120I | GGNCC | 5 cut(s) | 224, 864, 927, 954, 1618 |
| BmiI | GGNNCC | 7 cut(s) | 196, 375, 622, 865, 929, 1570, 1681 |
| BmrFI | CCNGG | 6 cut(s) | 157, 199, 311, 868, 999, 1739 |
| BmrI | ACTGGG | 2 cut(s) | 870, 1218 |
| BmsI | GCATC | 9 cut(s) | 734, 765, 838, 917, 1102, 1129, 1208, 1219, 1361 |
| BmuI | ACTGGG | 2 cut(s) | 870, 1218 |
| BpiI | GAAGAC | 2 cut(s) | 669, 1073 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 428, 460 |
| BpuEI | CTTGAG | 2 cut(s) | 386, 652 |
| BpuMI | CCSGG | 4 cut(s) | 157, 199, 999, 1739 |
| BsaBI | GATNNNNATC | 1 cut(s) | 589 |
| BsaHI | GRCGYC | 1 cut(s) | 195 |
| BsaI | GGTCTC | 2 cut(s) | 431, 1777 |
| BsaJI | CCNNGG | 2 cut(s) | 309, 719 |
| BsaWI | WCCGGW | 2 cut(s) | 679, 1102 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 105, 370, 447, 656, 860 |
| Bse118I | RCCGGY | 2 cut(s) | 105, 679 |
| Bse1I | ACTGG | 7 cut(s) | 605, 814, 865, 1224, 1457, 1537, 1674 |
| Bse8I | GATNNNNATC | 1 cut(s) | 589 |
| BseAI | TCCGGA | 1 cut(s) | 1102 |
| BseBI | CCWGG | 2 cut(s) | 311, 868 |
| BseDI | CCNNGG | 2 cut(s) | 309, 719 |
| BseGI | GGATG | 5 cut(s) | 268, 691, 780, 830, 853 |
| BseJI | GATNNNNATC | 1 cut(s) | 589 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 105, 370, 447, 656, 860 |
| BseMII | CTCAG | 4 cut(s) | 270, 743, 914, 1166 |
| BseNI | ACTGG | 7 cut(s) | 605, 814, 865, 1224, 1457, 1537, 1674 |
| BseRI | GAGGAG | 3 cut(s) | 229, 232, 244 |
| BseSI | GKGCMC | 3 cut(s) | 712, 1421, 1594 |
| BseXI | GCAGC | 2 cut(s) | 1471, 1493 |
| BseYI | CCCAGC | 2 cut(s) | 379, 1728 |
| BsgI | GTGCAG | 2 cut(s) | 537, 1392 |
| Bsh1236I | CGCG | 1 cut(s) | 1816 |
| Bsh1285I | CGRYCG | 1 cut(s) | 106 |
| BshFI | GGCC | 2 cut(s) | 5, 692 |
| BshNI | GGYRCC | 2 cut(s) | 194, 1568 |
| BshTI | ACCGGT | 1 cut(s) | 679 |
| BsiEI | CGRYCG | 1 cut(s) | 106 |
| BsiHKAI | GWGCWC | 3 cut(s) | 37, 1440, 1594 |
| BsiHKCI | CYCGRG | 3 cut(s) | 445, 1193, 1465 |
| BsiSI | CCGG | 8 cut(s) | 51, 106, 157, 198, 680, 998, 1103, 1739 |
| BslFI | GGGAC | 3 cut(s) | 280, 355, 913 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 105, 370, 447, 656, 860 |
| BsmAI | GTCTC | 2 cut(s) | 431, 1777 |
| BsmFI | GGGAC | 3 cut(s) | 280, 355, 913 |
| BsmI | GAATGC | 1 cut(s) | 1162 |
| BsnI | GGCC | 2 cut(s) | 5, 692 |
| Bso31I | GGTCTC | 2 cut(s) | 431, 1777 |
| BsoBI | CYCGRG | 3 cut(s) | 445, 1193, 1465 |
| Bsp1286I | GDGCHC | 6 cut(s) | 37, 378, 712, 1421, 1440, 1594 |
| Bsp13I | TCCGGA | 1 cut(s) | 1102 |
| Bsp143I | GATC | 9 cut(s) | 23, 47, 354, 590, 613, 755, 899, 1489, 1793 |
| Bsp19I | CCATGG | 1 cut(s) | 719 |
| BspACI | CCGC | 8 cut(s) | 12, 54, 67, 126, 192, 706, 1116, 1816 |
| BspANI | GGCC | 2 cut(s) | 5, 692 |
| BspCNI | CTCAG | 4 cut(s) | 269, 744, 915, 1165 |
| BspEI | TCCGGA | 1 cut(s) | 1102 |
| BspFNI | CGCG | 1 cut(s) | 1816 |
| BspHI | TCATGA | 1 cut(s) | 1471 |
| BspLI | GGNNCC | 7 cut(s) | 196, 375, 622, 865, 929, 1570, 1681 |
| BspMAI | CTGCAG | 1 cut(s) | 1489 |
| BspMI | ACCTGC | 1 cut(s) | 1800 |
| BspPI | GGATC | 4 cut(s) | 42, 598, 621, 1788 |
| BspQI | GCTCTTC | 1 cut(s) | 389 |
| BspT107I | GGYRCC | 2 cut(s) | 194, 1568 |
| BspTNI | GGTCTC | 2 cut(s) | 431, 1777 |
| BsrFI | RCCGGY | 2 cut(s) | 105, 679 |
| BsrI | ACTGG | 7 cut(s) | 605, 814, 865, 1224, 1457, 1537, 1674 |
| BssAI | RCCGGY | 2 cut(s) | 105, 679 |
| BssECI | CCNNGG | 2 cut(s) | 309, 719 |
| BssMI | GATC | 9 cut(s) | 23, 47, 354, 590, 613, 755, 899, 1489, 1793 |
| BssNI | GRCGYC | 1 cut(s) | 195 |
| BssT1I | CCWWGG | 1 cut(s) | 719 |
| Bst2UI | CCWGG | 2 cut(s) | 311, 868 |
| Bst4CI | ACNGT | 5 cut(s) | 78, 86, 783, 1413, 1511 |
| Bst6I | CTCTTC | 6 cut(s) | 250, 345, 389, 575, 886, 1161 |
| BstACI | GRCGYC | 1 cut(s) | 195 |
| BstC8I | GCNNGC | 2 cut(s) | 190, 708 |
| BstDEI | CTNAG | 6 cut(s) | 256, 752, 903, 923, 1152, 1162 |
| BstDSI | CCRYGG | 1 cut(s) | 719 |
| BstEII | GGTNACC | 1 cut(s) | 1540 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 368, 445 |
| BstF5I | GGATG | 5 cut(s) | 268, 691, 780, 830, 853 |
| BstFNI | CGCG | 1 cut(s) | 1816 |
| BstH2I | RGCGCY | 2 cut(s) | 198, 639 |
| BstHHI | GCGC | 2 cut(s) | 197, 638 |
| BstKTI | GATC | 9 cut(s) | 26, 50, 357, 593, 616, 758, 902, 1492, 1796 |
| BstMAI | GTCTC | 2 cut(s) | 431, 1777 |
| BstMBI | GATC | 9 cut(s) | 23, 47, 354, 590, 613, 755, 899, 1489, 1793 |
| BstMCI | CGRYCG | 1 cut(s) | 106 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 11, 125, 194, 515, 1729 |
| BstNI | CCWGG | 2 cut(s) | 311, 868 |
| BstNSI | RCATGY | 1 cut(s) | 413 |
| BstPI | GGTNACC | 1 cut(s) | 1540 |
| BstSCI | CCNGG | 6 cut(s) | 155, 197, 309, 866, 997, 1737 |
| BstSFI | CTRYAG | 1 cut(s) | 1485 |
| BstSLI | GKGCMC | 3 cut(s) | 712, 1421, 1594 |
| BstUI | CGCG | 1 cut(s) | 1816 |
| BstV1I | GCAGC | 2 cut(s) | 1471, 1493 |
| BstV2I | GAAGAC | 2 cut(s) | 669, 1073 |
| BstX2I | RGATCY | 4 cut(s) | 23, 755, 1489, 1793 |
| BstYI | RGATCY | 4 cut(s) | 23, 755, 1489, 1793 |
| BsuRI | GGCC | 2 cut(s) | 5, 692 |
| BtgI | CCRYGG | 1 cut(s) | 719 |
| BtrI | CACGTC | 1 cut(s) | 713 |
| BtsCI | GGATG | 5 cut(s) | 268, 691, 780, 830, 853 |
| BtsI | GCAGTG | 1 cut(s) | 6 |
| BtsIMutI | CAGTG | 3 cut(s) | 6, 1231, 1681 |
| BveI | ACCTGC | 1 cut(s) | 1800 |
| Cac8I | GCNNGC | 2 cut(s) | 190, 708 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1397, 1723 |
| CciI | TCATGA | 1 cut(s) | 1471 |
| CfoI | GCGC | 2 cut(s) | 197, 638 |
| Cfr10I | RCCGGY | 2 cut(s) | 105, 679 |
| Cfr13I | GGNCC | 5 cut(s) | 224, 864, 927, 954, 1618 |
| Csp6I | GTAC | 2 cut(s) | 79, 896 |
| CspAI | ACCGGT | 1 cut(s) | 679 |
| CviAII | CATG | 5 cut(s) | 410, 617, 720, 743, 1472 |
| CviQI | GTAC | 2 cut(s) | 79, 896 |
| DdeI | CTNAG | 6 cut(s) | 256, 752, 903, 923, 1152, 1162 |
| DinI | GGCGCC | 1 cut(s) | 196 |
| DpnI | GATC | 9 cut(s) | 25, 49, 356, 592, 615, 757, 901, 1491, 1795 |
| DpnII | GATC | 9 cut(s) | 23, 47, 354, 590, 613, 755, 899, 1489, 1793 |
| DraI | TTTAAA | 1 cut(s) | 1500 |
| DraIII | CACNNNGTG | 1 cut(s) | 656 |
| EaeI | YGGCCR | 2 cut(s) | 3, 690 |
| Eam1104I | CTCTTC | 6 cut(s) | 250, 345, 389, 575, 886, 1161 |
| EarI | CTCTTC | 6 cut(s) | 250, 345, 389, 575, 886, 1161 |
| EciI | GGCGGA | 1 cut(s) | 56 |
| Eco130I | CCWWGG | 1 cut(s) | 719 |
| Eco24I | GRGCYC | 1 cut(s) | 378 |
| Eco31I | GGTCTC | 2 cut(s) | 431, 1777 |
| Eco32I | GATATC | 1 cut(s) | 1210 |
| Eco47I | GGWCC | 5 cut(s) | 224, 864, 927, 954, 1618 |
| Eco47III | AGCGCT | 1 cut(s) | 637 |
| Eco57I | CTGAAG | 3 cut(s) | 531, 1224, 1374 |
| Eco88I | CYCGRG | 3 cut(s) | 445, 1193, 1465 |
| Eco91I | GGTNACC | 1 cut(s) | 1540 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 368, 445 |
| EcoO109I | RGGNCCY | 2 cut(s) | 864, 927 |
| EcoO65I | GGTNACC | 1 cut(s) | 1540 |
| EcoRII | CCWGG | 2 cut(s) | 309, 866 |
| EcoRV | GATATC | 1 cut(s) | 1210 |
| EcoT14I | CCWWGG | 1 cut(s) | 719 |
| EcoT38I | GRGCYC | 1 cut(s) | 378 |
| EgeI | GGCGCC | 1 cut(s) | 196 |
| EheI | GGCGCC | 1 cut(s) | 196 |
| ErhI | CCWWGG | 1 cut(s) | 719 |
| FaeI | CATG | 5 cut(s) | 413, 620, 723, 746, 1475 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1348, 1380 |
| FaqI | GGGAC | 3 cut(s) | 280, 355, 913 |
| FatI | CATG | 5 cut(s) | 409, 616, 719, 742, 1471 |
| FauI | CCCGC | 3 cut(s) | 133, 699, 1809 |
| FblI | GTMKAC | 1 cut(s) | 827 |
| Fnu4HI | GCNGC | 6 cut(s) | 12, 55, 193, 1116, 1482, 1485 |
| FokI | GGATG | 5 cut(s) | 275, 698, 787, 817, 860 |
| FriOI | GRGCYC | 1 cut(s) | 378 |
| Fsp4HI | GCNGC | 6 cut(s) | 12, 55, 193, 1116, 1482, 1485 |
| FspBI | CTAG | 5 cut(s) | 38, 90, 389, 1695, 1791 |
| GlaI | GCGC | 2 cut(s) | 196, 637 |
| GluI | GCNGC | 6 cut(s) | 12, 55, 193, 1116, 1482, 1485 |
| GsaI | CCCAGC | 2 cut(s) | 383, 1732 |
| HaeII | RGCGCY | 2 cut(s) | 198, 639 |
| HaeIII | GGCC | 2 cut(s) | 5, 692 |
| HapII | CCGG | 8 cut(s) | 51, 106, 157, 198, 680, 998, 1103, 1739 |
| HhaI | GCGC | 2 cut(s) | 197, 638 |
| Hin1I | GRCGYC | 1 cut(s) | 195 |
| Hin1II | CATG | 5 cut(s) | 413, 620, 723, 746, 1475 |
| Hin6I | GCGC | 2 cut(s) | 195, 636 |
| HinP1I | GCGC | 2 cut(s) | 195, 636 |
| HincII | GTYRAC | 1 cut(s) | 1007 |
| HindII | GTYRAC | 1 cut(s) | 1007 |
| HinfI | GANTC | 9 cut(s) | 41, 94, 230, 489, 544, 1106, 1191, 1307, 1468 |
| HpaII | CCGG | 8 cut(s) | 51, 106, 157, 198, 680, 998, 1103, 1739 |
| HphI | GGTGA | 5 cut(s) | 669, 671, 1148, 1253, 1534 |
| Hpy166II | GTNNAC | 6 cut(s) | 677, 828, 957, 1007, 1592, 1621 |
| Hpy188I | TCNGA | 9 cut(s) | 259, 349, 913, 1063, 1111, 1155, 1204, 1276, 1306 |
| Hpy8I | GTNNAC | 6 cut(s) | 677, 828, 957, 1007, 1592, 1621 |
| Hpy99I | CGWCG | 2 cut(s) | 78, 86 |
| HpyAV | CCTTC | 8 cut(s) | 364, 451, 506, 662, 741, 945, 1648, 1768 |
| HpyCH4III | ACNGT | 5 cut(s) | 78, 86, 783, 1413, 1511 |
| HpyCH4IV | ACGT | 2 cut(s) | 712, 1328 |
| HpyCH4V | TGCA | 9 cut(s) | 433, 518, 778, 1084, 1352, 1409, 1481, 1487, 1592 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 11, 125, 194, 515, 1729 |
| HpyF3I | CTNAG | 6 cut(s) | 256, 752, 903, 923, 1152, 1162 |
| HpySE526I | ACGT | 2 cut(s) | 712, 1328 |
| Hsp92I | GRCGYC | 1 cut(s) | 195 |
| Hsp92II | CATG | 5 cut(s) | 413, 620, 723, 746, 1475 |
| HspAI | GCGC | 2 cut(s) | 195, 636 |
| KasI | GGCGCC | 1 cut(s) | 194 |
| Kpn2I | TCCGGA | 1 cut(s) | 1102 |
| Kzo9I | GATC | 9 cut(s) | 23, 47, 354, 590, 613, 755, 899, 1489, 1793 |
| LguI | GCTCTTC | 1 cut(s) | 389 |
| LmnI | GCTCC | 4 cut(s) | 373, 1225, 1685, 1720 |
| Lsp1109I | GCAGC | 2 cut(s) | 1471, 1493 |
| LweI | GCATC | 9 cut(s) | 734, 765, 838, 917, 1102, 1129, 1208, 1219, 1361 |
| MaeI | CTAG | 5 cut(s) | 38, 90, 389, 1695, 1791 |
| MaeII | ACGT | 2 cut(s) | 712, 1328 |
| MaeIII | GTNAC | 3 cut(s) | 1324, 1540, 1648 |
| MalI | GATC | 9 cut(s) | 25, 49, 356, 592, 615, 757, 901, 1491, 1795 |
| MboI | GATC | 9 cut(s) | 23, 47, 354, 590, 613, 755, 899, 1489, 1793 |
| MflI | RGATCY | 4 cut(s) | 23, 755, 1489, 1793 |
| MhlI | GDGCHC | 6 cut(s) | 37, 378, 712, 1421, 1440, 1594 |
| MlsI | TGGCCA | 2 cut(s) | 5, 692 |
| MluCI | AATT | 9 cut(s) | 60, 145, 414, 817, 945, 1039, 1285, 1313, 1636 |
| MluNI | TGGCCA | 2 cut(s) | 5, 692 |
| Mly113I | GGCGCC | 1 cut(s) | 195 |
| MlyI | GAGTC | 6 cut(s) | 35, 88, 498, 553, 1185, 1477 |
| MmeI | TCCRAC | 1 cut(s) | 1821 |
| Mox20I | TGGCCA | 2 cut(s) | 5, 692 |
| MroI | TCCGGA | 1 cut(s) | 1102 |
| MscI | TGGCCA | 2 cut(s) | 5, 692 |
| MseI | TTAA | 6 cut(s) | 467, 480, 738, 1175, 1499, 1521 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1599, 1760 |
| Msp20I | TGGCCA | 2 cut(s) | 5, 692 |
| MspA1I | CMGCKG | 2 cut(s) | 192, 1484 |
| MspI | CCGG | 8 cut(s) | 51, 106, 157, 198, 680, 998, 1103, 1739 |
| MspR9I | CCNGG | 6 cut(s) | 157, 199, 311, 868, 999, 1739 |
| Mva1269I | GAATGC | 1 cut(s) | 1162 |
| MvaI | CCWGG | 2 cut(s) | 311, 868 |
| MvnI | CGCG | 1 cut(s) | 1816 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 11, 125, 194, 515, 1729 |
| NarI | GGCGCC | 1 cut(s) | 195 |
| NciI | CCSGG | 4 cut(s) | 157, 199, 999, 1739 |
| NcoI | CCATGG | 1 cut(s) | 719 |
| NdeII | GATC | 9 cut(s) | 23, 47, 354, 590, 613, 755, 899, 1489, 1793 |
| NlaIII | CATG | 5 cut(s) | 413, 620, 723, 746, 1475 |
| NlaIV | GGNNCC | 7 cut(s) | 196, 375, 622, 865, 929, 1570, 1681 |
| NmeAIII | GCCGAG | 1 cut(s) | 56 |
| NmuCI | GTSAC | 2 cut(s) | 1540, 1648 |
| NspI | RCATGY | 1 cut(s) | 413 |
| PaeR7I | CTCGAG | 3 cut(s) | 445, 1193, 1465 |
| PagI | TCATGA | 1 cut(s) | 1471 |
| PciSI | GCTCTTC | 1 cut(s) | 389 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 895 |
| PctI | GAATGC | 1 cut(s) | 1162 |
| PfeI | GAWTC | 3 cut(s) | 230, 1106, 1307 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 656 |
| PfoI | TCCNGGA | 1 cut(s) | 866 |
| PinAI | ACCGGT | 1 cut(s) | 679 |
| PkrI | GCNGC | 6 cut(s) | 13, 56, 194, 1117, 1483, 1486 |
| PleI | GAGTC | 6 cut(s) | 35, 88, 497, 552, 1185, 1476 |
| PluTI | GGCGCC | 1 cut(s) | 198 |
| PpsI | GAGTC | 6 cut(s) | 35, 88, 497, 552, 1185, 1476 |
| PpuMI | RGGWCCY | 2 cut(s) | 864, 927 |
| PshBI | ATTAAT | 1 cut(s) | 467 |
| Psp5II | RGGWCCY | 2 cut(s) | 864, 927 |
| Psp6I | CCWGG | 2 cut(s) | 309, 866 |
| PspEI | GGTNACC | 1 cut(s) | 1540 |
| PspFI | CCCAGC | 2 cut(s) | 379, 1728 |
| PspGI | CCWGG | 2 cut(s) | 309, 866 |
| PspN4I | GGNNCC | 7 cut(s) | 196, 375, 622, 865, 929, 1570, 1681 |
| PspPI | GGNCC | 5 cut(s) | 224, 864, 927, 954, 1618 |
| PspPPI | RGGWCCY | 2 cut(s) | 864, 927 |
| PspXI | VCTCGAGB | 2 cut(s) | 1193, 1465 |
| PstI | CTGCAG | 1 cut(s) | 1489 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1397, 1723 |
| PsuI | RGATCY | 4 cut(s) | 23, 755, 1489, 1793 |
| PvuII | CAGCTG | 1 cut(s) | 1484 |
| RsaI | GTAC | 2 cut(s) | 80, 897 |
| RsaNI | GTAC | 2 cut(s) | 79, 896 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1599, 1760 |
| SapI | GCTCTTC | 1 cut(s) | 389 |
| SaqAI | TTAA | 6 cut(s) | 467, 480, 738, 1175, 1499, 1521 |
| SatI | GCNGC | 6 cut(s) | 12, 55, 193, 1116, 1482, 1485 |
| Sau3AI | GATC | 9 cut(s) | 23, 47, 354, 590, 613, 755, 899, 1489, 1793 |
| Sau96I | GGNCC | 5 cut(s) | 224, 864, 927, 954, 1618 |
| SchI | GAGTC | 6 cut(s) | 35, 88, 498, 553, 1185, 1477 |
| ScrFI | CCNGG | 6 cut(s) | 157, 199, 311, 868, 999, 1739 |
| SduI | GDGCHC | 6 cut(s) | 37, 378, 712, 1421, 1440, 1594 |
| SfaNI | GCATC | 9 cut(s) | 734, 765, 838, 917, 1102, 1129, 1208, 1219, 1361 |
| SfcI | CTRYAG | 1 cut(s) | 1485 |
| SfoI | GGCGCC | 1 cut(s) | 196 |
| Sfr274I | CTCGAG | 3 cut(s) | 445, 1193, 1465 |
| SgrAI | CRCCGGYG | 1 cut(s) | 679 |
| SinI | GGWCC | 5 cut(s) | 224, 864, 927, 954, 1618 |
| SlaI | CTCGAG | 3 cut(s) | 445, 1193, 1465 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1599, 1760 |
| SmlI | CTYRAG | 5 cut(s) | 365, 445, 631, 1193, 1465 |
| SmoI | CTYRAG | 5 cut(s) | 365, 445, 631, 1193, 1465 |
| Sse9I | AATT | 9 cut(s) | 60, 145, 414, 817, 945, 1039, 1285, 1313, 1636 |
| SsiI | CCGC | 8 cut(s) | 12, 54, 67, 126, 192, 706, 1116, 1816 |
| SspDI | GGCGCC | 1 cut(s) | 194 |
| SspI | AATATT | 2 cut(s) | 205, 874 |
| SspMI | CTAG | 5 cut(s) | 38, 90, 389, 1695, 1791 |
| StyD4I | CCNGG | 6 cut(s) | 155, 197, 309, 866, 997, 1737 |
| StyI | CCWWGG | 1 cut(s) | 719 |
| TaaI | ACNGT | 5 cut(s) | 78, 86, 783, 1413, 1511 |
| TaiI | ACGT | 2 cut(s) | 715, 1331 |
| TaqI | TCGA | 6 cut(s) | 73, 305, 446, 485, 1194, 1466 |
| TasI | AATT | 9 cut(s) | 60, 145, 414, 817, 945, 1039, 1285, 1313, 1636 |
| TauI | GCSGC | 4 cut(s) | 14, 57, 195, 1118 |
| TfiI | GAWTC | 3 cut(s) | 230, 1106, 1307 |
| Tru1I | TTAA | 6 cut(s) | 467, 480, 738, 1175, 1499, 1521 |
| Tru9I | TTAA | 6 cut(s) | 467, 480, 738, 1175, 1499, 1521 |
| TscAI | CASTG | 3 cut(s) | 13, 1231, 1681 |
| TseFI | GTSAC | 2 cut(s) | 1540, 1648 |
| TseI | GCWGC | 2 cut(s) | 1481, 1484 |
| Tsp45I | GTSAC | 2 cut(s) | 1540, 1648 |
| TspDTI | ATGAA | 3 cut(s) | 309, 1539, 1617 |
| TspGWI | ACGGA | 5 cut(s) | 205, 750, 1373, 1569, 1592 |
| TspRI | CASTG | 3 cut(s) | 13, 1231, 1681 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 656 |
| VneI | GTGCAC | 1 cut(s) | 1590 |
| VpaK11BI | GGWCC | 5 cut(s) | 224, 864, 927, 954, 1618 |
| VspI | ATTAAT | 1 cut(s) | 467 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 368, 445 |
| XapI | RAATTY | 1 cut(s) | 1285 |
| XceI | RCATGY | 1 cut(s) | 413 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 317 |
| XhoI | CTCGAG | 3 cut(s) | 445, 1193, 1465 |
| XmiI | GTMKAC | 1 cut(s) | 827 |
| XspI | CTAG | 5 cut(s) | 38, 90, 389, 1695, 1791 |