Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0007306

Physical Location & Seq

Genomic Coordinates Forward (+)

62077066 .. 62083485

Gene Structure 6420 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG447700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1695 bp

ATGGCCTCCGTTTCCAGATCCCGGCGAGCCCTAGAAGCCGGATCCGGCGGCAAGATTGTCCGAACCCGACGACCCGCTCGTACCAGGACTCCCTACGAACGCCCCGCCTTCACCGTCAATCCTCCTCCTCCTCCCGAAAACCCTAATTGGCTCGCCAGGTTCATTTACTCCCCTACTCGCTCCATTGTCAGCGGCGCCGGAAAGGTCCTCTCCTCTGTTTTCCGCTCCGATTCGTCCTCCTCTTCCTCTTCAGAGCTTGGTAGTGACGACGAAGAAGGTGATGATGATTATGTTTCTTCTCAAGAAGATGATGCATTGAACAAGAGGAATGGGACATCAGAAACAGTATTCAGGCAGGGGGAAACCAAGCATGCAATTGAGCAGCTGCTGAGGCAGGAGACCTTCTCGAGGGATGAGTGTGATAAGTTAATAAAGATTATTAAATCGAGAGTCGTAGGCTGTACTACCACTGAAGATGCGGAAAATACCAGACCAAATATAGATACAACTGATCTTTCTGCAACAGCTGTTTCAGAGGCCAAAAAGTGGGTGATGGAGAAGAGGTTGGGATCAGCTTCAAAATCGAAGTTGGATCATGGAACAACGCTGTTTCCACAAGGTGCTGAAGATGATGGCGGTTCCCCAGTAGATCTGGCCAAATTGTACATGCGGGCACTACCTCCATGGGCATCTCCTTCAAATCAGCCTGGAGAATTGAGATCTACATCACCTCTAGGGTTGCAACTAGTTAATGAAGAAACCCCATATTCAATTGGTGGAACTTCTGTCAAGTCCAAGCTGAAAAGGGACTCGCCTGCTACTGGGTCATGGAATATCCAGGAGGAAATACGAAGAGTGCGTACTAAGGCAACAGAAGAAATGCTAAGGTCTCTACCTTCCTCGAAAATTGATTGGTCTGCCTATTCTCTGGAAAACAGAAGTACCTTGAAGTCTCTGCCAGATGGAAAGCAAGAAGCTGATTTGGGAGATAAACTTAAGAATCCTAGAACAGCTGCAGGTTTAACTATGGACCCGTCTTTAGGCATAACTACAACACATAGCTCTGACGTTACGGAGAAGACACAAGATGTGATGCAAAAAGGAGCTTTGACTAGTGGGACTGAACAGCCAAGTGCAATTGTAGGAGAAACCATACAATATTCAAAGGTGCATGACCAAACCTTTTCAACAACGGTAAAAGAAGCGACTGTTCATACCACTAATGGCTTCCCTTCTTCAGCACCGAGTTTGTCTACCCAATTGGGTAGAGGAGAAACCACACTGCTAAATGGAGAAATAAATCAGGTCAGTTCAAATCATGAGAAGATAGTTACAAATCTCCTGGTGGAGGAAACCTATGAGCTTGAGAAGGAAACTACCATCGACCTCTCCAAGAATAATGAAAATGATATTGATGGCACAAATGGCCCTGATTCTATGCCTTTGAATGAAGCCAGTGTCAAGGTCCCAGATGTGAATGAAAATGATAATGATGGCACAAAGGAAAATGACAGTACTCCAAGTGGCTCCCAAAACAGTTCAAGTATGCCTGATGAGTTATCACAGGAGCTGACCCAGCCTCAGCCGAAAGTAAATGACACTGTGGTAGCCAAGGAAGACAGCGTTGTTGAGAAGCCGAAGAAGGCAACAAGACTCACCAGATACAACAGGAGAGGCAGGCCACGGGGTAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005886 GO:0006996 GO:0006997 GO:0006998 GO:0008150 GO:0009987 GO:0010256 GO:0012505 GO:0016020 GO:0016043 GO:0031410 GO:0031967 GO:0031975 GO:0031982 GO:0031984 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0061024 GO:0071763 GO:0071840 GO:0071944 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

564

Amino Acids

61.51

Weight (kDa)

5.4

Isoelectric Point (pI)

51.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007306)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31430 AT4G31430 AT4G31430
fragaria_vesca	FvH4_2g36900
malus_domestica	MD00G1205700.v1.1 MD08G1130500.v1.1 MD15G1108600.v1.1
prunus_persica	Prupe.1G460900_v2.0.a1 Prupe.1G460900_v2.0.a1 Prupe.1G460900_v2.0.a1 Prupe.1G460900_v2.0.a1 Prupe.1G460900_v2.0.a1 Prupe.1G460900_v2.0.a1
pyrus_communis	pycom08g10960 pycom15g09920
rosa_chinensis	RchiOBHm_Chr6g0304881
rosa_laevigata	RLG00000010942
rosa_multiflora	Rmu_ssc0000278.1_g000005
rosa_roxburghii	Rroxscaffold_7G00163380
rosa_rugosa	Rorug06G0336000
rosa_samantha	Rh6AG447200 Rh6BG454300 Rh6CG460700 Rh6DG447700
rosa_wichuraiana	Rw6G038930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1007
AccB1I	GGYRCC	1 cut(s)	194
AccB7I	CCANNNNNTGG	1 cut(s)	546
AccBSI	CCGCTC	2 cut(s)	77, 225
AccI	GTMKAC	1 cut(s)	1253
AciI	CCGC	8 cut(s)	48, 75, 105, 192, 223, 479, 636, 670
AclWI	GGATC	5 cut(s)	12, 36, 49, 577, 600
AcoI	YGGCCR	1 cut(s)	654
AcuI	CTGAAG	4 cut(s)	234, 492, 645, 1221
AcyI	GRCGYC	1 cut(s)	195
AdeI	CACNNNGTG	1 cut(s)	620
AfaI	GTAC	6 cut(s)	82, 463, 665, 862, 943, 1516
AfiI	CCNNNNNNNGG	6 cut(s)	21, 408, 546, 821, 1040, 1348
AflII	CTTAAG	1 cut(s)	995
AhlI	ACTAGT	2 cut(s)	745, 1112
AjnI	CCWGG	5 cut(s)	83, 155, 706, 837, 1341
Alw26I	GTCTC	3 cut(s)	392, 894, 957
AlwI	GGATC	5 cut(s)	12, 36, 49, 577, 600
AlwNI	CAGNNNCTG	2 cut(s)	388, 1570
Ama87I	CYCGRG	1 cut(s)	406
AoxI	GGCC	5 cut(s)	3, 537, 654, 1426, 1679
ApeKI	GCWGC	3 cut(s)	382, 385, 1013
AspLEI	GCGC	1 cut(s)	197
AspS9I	GGNCC	4 cut(s)	205, 1030, 1427, 1465
AsuC2I	CCSGG	1 cut(s)	22
AsuHPI	GGTGA	5 cut(s)	103, 290, 562, 720, 1648
AvaI	CYCGRG	1 cut(s)	406
AvaII	GGWCC	3 cut(s)	205, 1030, 1465
BaeGI	GKGCMC	1 cut(s)	676
BaeI	ACNNNNGTAYC	2 cut(s)	925, 958
BalI	TGGCCA	1 cut(s)	656
BamHI	GGATCC	1 cut(s)	41
BanI	GGYRCC	1 cut(s)	194
BanII	GRGCYC	1 cut(s)	31
BarI	GAAGNNNNNNTAC	2 cut(s)	844, 876
BbsI	GAAGAC	2 cut(s)	1085, 1623
BbvCI	CCTCAGC	2 cut(s)	389, 1581
BbvI	GCAGC	3 cut(s)	372, 394, 1000
BccI	CCATC	6 cut(s)	547, 626, 956, 1388, 1409, 1487
BciT130I	CCWGG	5 cut(s)	85, 157, 708, 839, 1343
BcnI	CCSGG	1 cut(s)	22
BcoDI	GTCTC	3 cut(s)	392, 894, 957
BcuI	ACTAGT	2 cut(s)	745, 1112
BfaI	CTAG	5 cut(s)	32, 734, 746, 1005, 1113
BfmI	CTRYAG	1 cut(s)	1014
BfoI	RGCGCY	1 cut(s)	198
BfrI	CTTAAG	1 cut(s)	995
BfuAI	ACCTGC	1 cut(s)	1007
BglII	AGATCT	2 cut(s)	649, 719
BisI	GCNGC	5 cut(s)	49, 193, 383, 386, 1014
BlsI	GCNGC	5 cut(s)	50, 194, 384, 387, 1015
BmcAI	AGTACT	1 cut(s)	1516
Bme1390I	CCNGG	6 cut(s)	22, 85, 157, 708, 839, 1343
Bme18I	GGWCC	3 cut(s)	205, 1030, 1465
BmeT110I	CYCGRG	1 cut(s)	406
BmgT120I	GGNCC	4 cut(s)	205, 1030, 1427, 1465
BmiI	GGNNCC	6 cut(s)	43, 196, 640, 1032, 1467, 1528
BmrFI	CCNGG	6 cut(s)	22, 85, 157, 708, 839, 1343
BmrI	ACTGGG	2 cut(s)	638, 831
BmsI	GCATC	4 cut(s)	301, 466, 698, 1083
BmuI	ACTGGG	2 cut(s)	638, 831
BpiI	GAAGAC	2 cut(s)	1085, 1623
BplI	GAGNNNNNCTC	2 cut(s)	389, 421
BpmI	CTGGAG	1 cut(s)	729
Bpu10I	CCTNAGC	3 cut(s)	389, 884, 1581
BpuEI	CTTGAG	2 cut(s)	285, 1385
BpuMI	CCSGG	1 cut(s)	22
BsaBI	GATNNNNATC	1 cut(s)	724
BsaHI	GRCGYC	1 cut(s)	195
BsaI	GGTCTC	2 cut(s)	392, 894
BsaJI	CCNNGG	3 cut(s)	683, 1611, 1682
BsaXI	ACNNNNNCTCC	4 cut(s)	73, 103, 548, 578
Bsc4I	CCNNNNNNNGG	6 cut(s)	21, 408, 546, 821, 1040, 1348
Bse1I	ACTGG	3 cut(s)	644, 826, 1455
Bse8I	GATNNNNATC	1 cut(s)	724
BseBI	CCWGG	5 cut(s)	85, 157, 708, 839, 1343
BseDI	CCNNGG	3 cut(s)	683, 1611, 1682
BseGI	GGATG	1 cut(s)	418
BseJI	GATNNNNATC	1 cut(s)	724
BseLI	CCNNNNNNNGG	6 cut(s)	21, 408, 546, 821, 1040, 1348
BseMII	CTCAG	2 cut(s)	380, 1595
BseNI	ACTGG	3 cut(s)	644, 826, 1455
BseRI	GAGGAG	6 cut(s)	114, 117, 120, 202, 229, 1284
BseSI	GKGCMC	1 cut(s)	676
BseXI	GCAGC	3 cut(s)	372, 394, 1000
BseYI	CCCAGC	1 cut(s)	1575
BshFI	GGCC	5 cut(s)	5, 539, 656, 1428, 1681
BshNI	GGYRCC	1 cut(s)	194
BsiHKCI	CYCGRG	1 cut(s)	406
BsiSI	CCGG	4 cut(s)	22, 39, 45, 198
BslFI	GGGAC	4 cut(s)	346, 821, 1132, 1451
BslI	CCNNNNNNNGG	6 cut(s)	21, 408, 546, 821, 1040, 1348
BsmAI	GTCTC	3 cut(s)	392, 894, 957
BsmFI	GGGAC	4 cut(s)	346, 821, 1132, 1451
BsnI	GGCC	5 cut(s)	5, 539, 656, 1428, 1681
Bso31I	GGTCTC	2 cut(s)	392, 894
BsoBI	CYCGRG	1 cut(s)	406
Bsp1286I	GDGCHC	2 cut(s)	31, 676
Bsp1407I	TGTACA	1 cut(s)	663
Bsp143I	GATC	7 cut(s)	17, 41, 511, 569, 592, 649, 719
Bsp19I	CCATGG	1 cut(s)	683
BspACI	CCGC	8 cut(s)	48, 75, 105, 192, 223, 479, 636, 670
BspANI	GGCC	5 cut(s)	5, 539, 656, 1428, 1681
BspCNI	CTCAG	2 cut(s)	381, 1594
BspHI	TCATGA	1 cut(s)	1318
BspLI	GGNNCC	6 cut(s)	43, 196, 640, 1032, 1467, 1528
BspMAI	CTGCAG	1 cut(s)	1018
BspMI	ACCTGC	1 cut(s)	1007
BspPI	GGATC	5 cut(s)	12, 36, 49, 577, 600
BspT107I	GGYRCC	1 cut(s)	194
BspTI	CTTAAG	1 cut(s)	995
BspTNI	GGTCTC	2 cut(s)	392, 894
BsrBI	CCGCTC	2 cut(s)	77, 225
BsrGI	TGTACA	1 cut(s)	663
BsrI	ACTGG	3 cut(s)	644, 826, 1455
BssECI	CCNNGG	3 cut(s)	683, 1611, 1682
BssMI	GATC	7 cut(s)	17, 41, 511, 569, 592, 649, 719
BssNI	GRCGYC	1 cut(s)	195
BssT1I	CCWWGG	2 cut(s)	683, 1611
Bst2UI	CCWGG	5 cut(s)	85, 157, 708, 839, 1343
Bst4CI	ACNGT	7 cut(s)	115, 346, 1195, 1210, 1514, 1538, 1603
Bst6I	CTCTTC	4 cut(s)	247, 253, 554, 847
BstACI	GRCGYC	1 cut(s)	195
BstAFI	CTTAAG	1 cut(s)	995
BstAUI	TGTACA	1 cut(s)	663
BstC8I	GCNNGC	6 cut(s)	27, 153, 372, 672, 816, 1679
BstDEI	CTNAG	4 cut(s)	389, 864, 884, 1581
BstDSI	CCRYGG	2 cut(s)	683, 1682
BstENI	CCTNNNNNAGG	2 cut(s)	406, 1346
BstF5I	GGATG	1 cut(s)	418
BstH2I	RGCGCY	1 cut(s)	198
BstHHI	GCGC	1 cut(s)	197
BstKTI	GATC	7 cut(s)	20, 44, 514, 572, 595, 652, 722
BstMAI	GTCTC	3 cut(s)	392, 894, 957
BstMBI	GATC	7 cut(s)	17, 41, 511, 569, 592, 649, 719
BstMWI	GCNNNNNNNGC	4 cut(s)	35, 391, 1425, 1576
BstNI	CCWGG	5 cut(s)	85, 157, 708, 839, 1343
BstNSI	RCATGY	2 cut(s)	374, 670
BstSCI	CCNGG	6 cut(s)	20, 83, 155, 706, 837, 1341
BstSFI	CTRYAG	1 cut(s)	1014
BstSLI	GKGCMC	1 cut(s)	676
BstV1I	GCAGC	3 cut(s)	372, 394, 1000
BstV2I	GAAGAC	2 cut(s)	1085, 1623
BstX2I	RGATCY	4 cut(s)	17, 41, 649, 719
BstYI	RGATCY	4 cut(s)	17, 41, 649, 719
BsuRI	GGCC	5 cut(s)	5, 539, 656, 1428, 1681
BtgI	CCRYGG	2 cut(s)	683, 1682
BtsCI	GGATG	1 cut(s)	418
BtsI	GCAGTG	1 cut(s)	1280
BtsIMutI	CAGTG	4 cut(s)	468, 1280, 1462, 1599
BveI	ACCTGC	1 cut(s)	1007
Cac8I	GCNNGC	6 cut(s)	27, 153, 372, 672, 816, 1679
CaiI	CAGNNNCTG	2 cut(s)	388, 1570
CciI	TCATGA	1 cut(s)	1318
CfoI	GCGC	1 cut(s)	197
Cfr13I	GGNCC	4 cut(s)	205, 1030, 1427, 1465
Csp6I	GTAC	6 cut(s)	81, 462, 664, 861, 942, 1515
CviAII	CATG	7 cut(s)	371, 596, 667, 684, 828, 1172, 1319
CviQI	GTAC	6 cut(s)	81, 462, 664, 861, 942, 1515
DdeI	CTNAG	4 cut(s)	389, 864, 884, 1581
DinI	GGCGCC	1 cut(s)	196
DpnI	GATC	7 cut(s)	19, 43, 513, 571, 594, 651, 721
DpnII	GATC	7 cut(s)	17, 41, 511, 569, 592, 649, 719
DraIII	CACNNNGTG	1 cut(s)	620
EaeI	YGGCCR	1 cut(s)	654
Eam1104I	CTCTTC	4 cut(s)	247, 253, 554, 847
EarI	CTCTTC	4 cut(s)	247, 253, 554, 847
Eco130I	CCWWGG	2 cut(s)	683, 1611
Eco24I	GRGCYC	1 cut(s)	31
Eco31I	GGTCTC	2 cut(s)	392, 894
Eco47I	GGWCC	3 cut(s)	205, 1030, 1465
Eco57I	CTGAAG	4 cut(s)	234, 492, 645, 1221
Eco88I	CYCGRG	1 cut(s)	406
EcoNI	CCTNNNNNAGG	2 cut(s)	406, 1346
EcoO109I	RGGNCCY	2 cut(s)	205, 1465
EcoRII	CCWGG	5 cut(s)	83, 155, 706, 837, 1341
EcoT14I	CCWWGG	2 cut(s)	683, 1611
EcoT22I	ATGCAT	1 cut(s)	316
EcoT38I	GRGCYC	1 cut(s)	31
EgeI	GGCGCC	1 cut(s)	196
EheI	GGCGCC	1 cut(s)	196
ErhI	CCWWGG	2 cut(s)	683, 1611
FaeI	CATG	7 cut(s)	374, 599, 670, 687, 831, 1175, 1322
FaqI	GGGAC	4 cut(s)	346, 821, 1132, 1451
FatI	CATG	7 cut(s)	370, 595, 666, 683, 827, 1171, 1318
FauI	CCCGC	3 cut(s)	82, 112, 663
FblI	GTMKAC	1 cut(s)	1253
Fnu4HI	GCNGC	5 cut(s)	49, 193, 383, 386, 1014
FokI	GGATG	1 cut(s)	425
FriOI	GRGCYC	1 cut(s)	31
Fsp4HI	GCNGC	5 cut(s)	49, 193, 383, 386, 1014
FspBI	CTAG	5 cut(s)	32, 734, 746, 1005, 1113
GlaI	GCGC	1 cut(s)	196
GluI	GCNGC	5 cut(s)	49, 193, 383, 386, 1014
GsaI	CCCAGC	1 cut(s)	1579
GsuI	CTGGAG	1 cut(s)	729
HaeII	RGCGCY	1 cut(s)	198
HaeIII	GGCC	5 cut(s)	5, 539, 656, 1428, 1681
HapII	CCGG	4 cut(s)	22, 39, 45, 198
HhaI	GCGC	1 cut(s)	197
Hin1I	GRCGYC	1 cut(s)	195
Hin1II	CATG	7 cut(s)	374, 599, 670, 687, 831, 1175, 1322
Hin6I	GCGC	1 cut(s)	195
HinP1I	GCGC	1 cut(s)	195
HinfI	GANTC	7 cut(s)	88, 230, 450, 809, 1000, 1433, 1653
HpaII	CCGG	4 cut(s)	22, 39, 45, 198
HphI	GGTGA	5 cut(s)	103, 290, 562, 720, 1648
Hpy166II	GTNNAC	1 cut(s)	1254
Hpy188I	TCNGA	6 cut(s)	62, 229, 253, 340, 535, 1066
Hpy188III	TCNNGA	7 cut(s)	15, 134, 302, 406, 447, 929, 1319
Hpy8I	GTNNAC	1 cut(s)	1254
Hpy99I	CGWCG	2 cut(s)	72, 272
HpyAV	CCTTC	8 cut(s)	118, 269, 412, 705, 906, 1242, 1363, 1636
HpyCH4III	ACNGT	7 cut(s)	115, 346, 1195, 1210, 1514, 1538, 1603
HpyCH4IV	ACGT	1 cut(s)	1068
HpyCH4V	TGCA	8 cut(s)	314, 374, 521, 742, 1016, 1096, 1136, 1171
HpyF10VI	GCNNNNNNNGC	4 cut(s)	35, 391, 1425, 1576
HpyF3I	CTNAG	4 cut(s)	389, 864, 884, 1581
HpySE526I	ACGT	1 cut(s)	1068
Hsp92I	GRCGYC	1 cut(s)	195
Hsp92II	CATG	7 cut(s)	374, 599, 670, 687, 831, 1175, 1322
HspAI	GCGC	1 cut(s)	195
KasI	GGCGCC	1 cut(s)	194
Kzo9I	GATC	7 cut(s)	17, 41, 511, 569, 592, 649, 719
LmnI	GCTCC	5 cut(s)	185, 230, 1103, 1532, 1567
Lsp1109I	GCAGC	3 cut(s)	372, 394, 1000
LweI	GCATC	4 cut(s)	301, 466, 698, 1083
MaeI	CTAG	5 cut(s)	32, 734, 746, 1005, 1113
MaeII	ACGT	1 cut(s)	1068
MaeIII	GTNAC	3 cut(s)	263, 1069, 1330
MalI	GATC	7 cut(s)	19, 43, 513, 571, 594, 651, 721
MbiI	CCGCTC	2 cut(s)	77, 225
MboI	GATC	7 cut(s)	17, 41, 511, 569, 592, 649, 719
MfeI	CAATTG	4 cut(s)	375, 771, 1137, 1259
MflI	RGATCY	4 cut(s)	17, 41, 649, 719
MhlI	GDGCHC	2 cut(s)	31, 676
MlsI	TGGCCA	1 cut(s)	656
MluCI	AATT	8 cut(s)	145, 375, 659, 713, 771, 906, 1137, 1259
MluNI	TGGCCA	1 cut(s)	656
Mly113I	GGCGCC	1 cut(s)	195
MlyI	GAGTC	4 cut(s)	82, 459, 803, 1647
MmeI	TCCRAC	1 cut(s)	570
Mox20I	TGGCCA	1 cut(s)	656
Mph1103I	ATGCAT	1 cut(s)	316
MscI	TGGCCA	1 cut(s)	656
MseI	TTAA	5 cut(s)	428, 441, 750, 996, 1022
Msp20I	TGGCCA	1 cut(s)	656
MspA1I	CMGCKG	4 cut(s)	192, 385, 527, 1013
MspCI	CTTAAG	1 cut(s)	995
MspI	CCGG	4 cut(s)	22, 39, 45, 198
MspR9I	CCNGG	6 cut(s)	22, 85, 157, 708, 839, 1343
MunI	CAATTG	4 cut(s)	375, 771, 1137, 1259
MvaI	CCWGG	5 cut(s)	85, 157, 708, 839, 1343
MwoI	GCNNNNNNNGC	4 cut(s)	35, 391, 1425, 1576
NarI	GGCGCC	1 cut(s)	195
NciI	CCSGG	1 cut(s)	22
NcoI	CCATGG	1 cut(s)	683
NdeII	GATC	7 cut(s)	17, 41, 511, 569, 592, 649, 719
NlaIII	CATG	7 cut(s)	374, 599, 670, 687, 831, 1175, 1322
NlaIV	GGNNCC	6 cut(s)	43, 196, 640, 1032, 1467, 1528
NmuCI	GTSAC	1 cut(s)	263
NsiI	ATGCAT	1 cut(s)	316
NspI	RCATGY	2 cut(s)	374, 670
PaeI	GCATGC	1 cut(s)	374
PaeR7I	CTCGAG	1 cut(s)	406
PagI	TCATGA	1 cut(s)	1318
PcsI	WCGNNNNNNNCGW	2 cut(s)	76, 856
PfeI	GAWTC	3 cut(s)	230, 1000, 1433
PflMI	CCANNNNNTGG	1 cut(s)	546
PfoI	TCCNGGA	1 cut(s)	837
PkrI	GCNGC	5 cut(s)	50, 194, 384, 387, 1015
PleI	GAGTC	4 cut(s)	82, 458, 803, 1647
PluTI	GGCGCC	1 cut(s)	198
PpsI	GAGTC	4 cut(s)	82, 458, 803, 1647
PpuMI	RGGWCCY	2 cut(s)	205, 1465
Psp5II	RGGWCCY	2 cut(s)	205, 1465
Psp6I	CCWGG	5 cut(s)	83, 155, 706, 837, 1341
PspFI	CCCAGC	1 cut(s)	1575
PspGI	CCWGG	5 cut(s)	83, 155, 706, 837, 1341
PspN4I	GGNNCC	6 cut(s)	43, 196, 640, 1032, 1467, 1528
PspPI	GGNCC	4 cut(s)	205, 1030, 1427, 1465
PspPPI	RGGWCCY	2 cut(s)	205, 1465
PstI	CTGCAG	1 cut(s)	1018
PstNI	CAGNNNCTG	2 cut(s)	388, 1570
PsuI	RGATCY	4 cut(s)	17, 41, 649, 719
PvuII	CAGCTG	3 cut(s)	385, 527, 1013
RsaI	GTAC	6 cut(s)	82, 463, 665, 862, 943, 1516
RsaNI	GTAC	6 cut(s)	81, 462, 664, 861, 942, 1515
SaqAI	TTAA	5 cut(s)	428, 441, 750, 996, 1022
SatI	GCNGC	5 cut(s)	49, 193, 383, 386, 1014
Sau3AI	GATC	7 cut(s)	17, 41, 511, 569, 592, 649, 719
Sau96I	GGNCC	4 cut(s)	205, 1030, 1427, 1465
ScaI	AGTACT	1 cut(s)	1516
SchI	GAGTC	4 cut(s)	82, 459, 803, 1647
ScrFI	CCNGG	6 cut(s)	22, 85, 157, 708, 839, 1343
SduI	GDGCHC	2 cut(s)	31, 676
SfaNI	GCATC	4 cut(s)	301, 466, 698, 1083
SfcI	CTRYAG	1 cut(s)	1014
SfoI	GGCGCC	1 cut(s)	196
Sfr274I	CTCGAG	1 cut(s)	406
SinI	GGWCC	3 cut(s)	205, 1030, 1465
SlaI	CTCGAG	1 cut(s)	406
SmlI	CTYRAG	4 cut(s)	300, 406, 995, 1364
SmoI	CTYRAG	4 cut(s)	300, 406, 995, 1364
SpeI	ACTAGT	2 cut(s)	745, 1112
SphI	GCATGC	1 cut(s)	374
Sse9I	AATT	8 cut(s)	145, 375, 659, 713, 771, 906, 1137, 1259
SsiI	CCGC	8 cut(s)	48, 75, 105, 192, 223, 479, 636, 670
SspDI	GGCGCC	1 cut(s)	194
SspI	AATATT	1 cut(s)	1160
SspMI	CTAG	5 cut(s)	32, 734, 746, 1005, 1113
StyD4I	CCNGG	6 cut(s)	20, 83, 155, 706, 837, 1341
StyI	CCWWGG	2 cut(s)	683, 1611
TaaI	ACNGT	7 cut(s)	115, 346, 1195, 1210, 1514, 1538, 1603
TaiI	ACGT	1 cut(s)	1071
TaqI	TCGA	5 cut(s)	407, 446, 584, 902, 1383
TasI	AATT	8 cut(s)	145, 375, 659, 713, 771, 906, 1137, 1259
TatI	WGTACW	3 cut(s)	461, 663, 1514
TauI	GCSGC	2 cut(s)	51, 195
TfiI	GAWTC	3 cut(s)	230, 1000, 1433
Tru1I	TTAA	5 cut(s)	428, 441, 750, 996, 1022
Tru9I	TTAA	5 cut(s)	428, 441, 750, 996, 1022
TscAI	CASTG	4 cut(s)	475, 1287, 1462, 1606
TseFI	GTSAC	1 cut(s)	263
TseI	GCWGC	3 cut(s)	382, 385, 1013
Tsp45I	GTSAC	1 cut(s)	263
TspDTI	ATGAA	6 cut(s)	151, 768, 1202, 1416, 1464, 1494
TspGWI	ACGGA	1 cut(s)	1088
TspRI	CASTG	4 cut(s)	475, 1287, 1462, 1606
Van91I	CCANNNNNTGG	1 cut(s)	546
Vha464I	CTTAAG	1 cut(s)	995
VpaK11BI	GGWCC	3 cut(s)	205, 1030, 1465
XagI	CCTNNNNNAGG	2 cut(s)	406, 1346
XceI	RCATGY	2 cut(s)	374, 670
XhoI	CTCGAG	1 cut(s)	406
XmiI	GTMKAC	1 cut(s)	1253
XspI	CTAG	5 cut(s)	32, 734, 746, 1005, 1113
ZrmI	AGTACT	1 cut(s)	1516
Zsp2I	ATGCAT	1 cut(s)	316

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.