Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0007306

Physical Location & Seq

Genomic Coordinates Reverse (-)

5655505 .. 5662708

Gene Structure 7204 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00163380.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1791 bp

ATGGATTCTTTGATTGCGCAAGCGCTAGCCTCAGCGTCTGATAGATCCCGGCGAGCCCTAGAAGCCGGATCCGGCGGCAAGATTGTCCGAACCCGACGACCCGCTCGTACCAGGACTCCCTACGAACGGCCCCCCGCCTTCACCGTCAATCCTCCTCCCGAAAACCCTAATTGGCTCGCCAGGTTCATTTACTCCCCTACTCGCTCTATTGTCAGCGGCGCCGGAAAGGTCCTCTCCTCTGTTTTCCGCTCCGATTCGTCCTCCTCTTCCTCTTCAGAGCTTGGTAGTGACGACGAAGAAGGTGATGATGATTATGTTTCTTCTCAAGAAGATGGTGCATTGAACAAGAGGAATGGGACATCAGAAACAGTATTCAGGCAGGGGGAAACCAAGCATGCAATTGAGCAGCTGCTGAGGCAGGAGACCTTCTCGAGGGATGAGTGTGATAAGTTAATAAAGATTATTAAATCGAGAGTCGTAGGCTGTACCACCACTGAAGACGCGGAAAATACCAGACCAAATGTAGATACAACGGATCTTTCTGCAACAGCTGTTTCAGAGGCCAAAAAGTGGGTGATGGAGAAGAGGTTGGGATCAGCTTCAAAATCGAAGTCGGATCATGGAACAATTCTGTTTCCACAAGGTGCTGAATATGATGGTGGTTCCCCAGTAGATGTGGCCAAATTGTACATGCAGGCACTACCTCCATGGGCATCTCCTTCAAATCAGCATGGAGAATTGAGATCTACATCACCTCTAGGGTTGCAACTATTTAATGAAGAAACCCCATATTCAATTGGTGGAACTTCTGTCAAGTCCAAGCTGAAAAGGGACTCGCCTGCTACTGGGTCATGGAATATCCAGGAGGAAATACGAAGAGTGCGTACTAAGGCAACAGAAGAAATGCTAAGGTCTCTACCTTCCTCGACTATTGATTGGTCTGCATATTCTCTGGAAAACAGAAGTACCTTGAAGTCTCTGCCAGATGGAAAGCAAGAAGCTGATTTGGGAGATAAACTTAAGAATCCTAGAACAGCTGCAGGTTTAACTATGGACCCGTCTTTAGGCATAACTACAACACATAGCTCTGACGTTACGGAGAAGACACAAGATGTGCTGCAAAAAGGAGCTTTGACTAGTGGGACTGAACAGCCAAGTGCAATTGTAGGAGAAACCATACAGTATCAGTTTAGAGGTTCAGGTAGCTTTGATGATGCAGTTGTCTATTCAAAGGTGCATGACCAAACCTTTTCAACAACGGCAAAAGAAGTGACTGTTCATACCACTAATGGCTTCCCTTCAGCACCGAGTTTGTCTACCCAATTGGGTAGAGAGGAAACCACACTGCTAAATGGAGAAATAAATCAGGTCAGTTCAAGTCATGAGAAGATAGTTACAAATCTCCTGGTGGAGGAAACCTATGAGCTTGAGAAGGAAACTACCATCGACCTCTCCAAGAATAATGAAAATGATATTGATGGCACAAATGGCCCTGATTCTATGCCTTTGAATGGAGCCAGTGTCAAGGTCCCAGATCTGAATGAAAATGATAATGATGGCACAAAGGAAAATGACAGTGCTCCAAGTGGCTCCCAAAACAGTTCAAGTATGCCTGATGAGTTATCACAGGAGCTGACCCAGCCTCAGCCGAAATTAAATGACACTGCGGTAGCCATGGAAGACAGCGTTGTAGGAACTACTGTCGGGTATTTATGCCGCGGATTTAGTCCATGTTTAGCTGAACTTAAGTTGAACTGGAAAGCATTCTCCAGAAGTAGAATTTGGAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005886 GO:0006996 GO:0006997 GO:0006998 GO:0008150 GO:0009987 GO:0010256 GO:0012505 GO:0016020 GO:0016043 GO:0031410 GO:0031967 GO:0031975 GO:0031982 GO:0031984 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0061024 GO:0071763 GO:0071840 GO:0071944 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

596

Amino Acids

64.76

Weight (kDa)

5.01

Isoelectric Point (pI)

49.97

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007306)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31430 AT4G31430 AT4G31430
fragaria_vesca	FvH4_2g36900
malus_domestica	MD00G1205700.v1.1 MD08G1130500.v1.1 MD15G1108600.v1.1
prunus_persica	Prupe.1G460900_v2.0.a1 Prupe.1G460900_v2.0.a1 Prupe.1G460900_v2.0.a1 Prupe.1G460900_v2.0.a1 Prupe.1G460900_v2.0.a1 Prupe.1G460900_v2.0.a1
pyrus_communis	pycom08g10960 pycom15g09920
rosa_chinensis	RchiOBHm_Chr6g0304881
rosa_laevigata	RLG00000010942
rosa_multiflora	Rmu_ssc0000278.1_g000005
rosa_roxburghii	Rroxscaffold_7G00163380
rosa_rugosa	Rorug06G0336000
rosa_samantha	Rh6AG447200 Rh6BG454300 Rh6CG460700 Rh6DG447700
rosa_wichuraiana	Rw6G038930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	18
Acc36I	ACCTGC	1 cut(s)	1031
AccB1I	GGYRCC	1 cut(s)	218
AccB7I	CCANNNNNTGG	1 cut(s)	570
AccBSI	CCGCTC	2 cut(s)	104, 249
AccI	GTMKAC	1 cut(s)	1316
AccII	CGCG	2 cut(s)	503, 1719
AciI	CCGC	9 cut(s)	75, 102, 135, 216, 247, 503, 1667, 1717, 1719
AclWI	GGATC	6 cut(s)	39, 63, 76, 543, 601, 624
AcoI	YGGCCR	1 cut(s)	678
AcsI	RAATTY	1 cut(s)	1779
AcuI	CTGAAG	3 cut(s)	258, 516, 1284
AcyI	GRCGYC	1 cut(s)	219
AdeI	CACNNNGTG	1 cut(s)	644
AfaI	GTAC	5 cut(s)	109, 487, 689, 886, 967
AfeI	AGCGCT	1 cut(s)	24
AfiI	CCNNNNNNNGG	7 cut(s)	126, 432, 570, 845, 1064, 1411, 1511
AflII	CTTAAG	2 cut(s)	1019, 1745
AhlI	ACTAGT	1 cut(s)	1136
AjnI	CCWGG	4 cut(s)	110, 179, 861, 1404
AjuI	GAANNNNNNNTTGG	1 cut(s)	1765
Alw21I	GWGCWC	1 cut(s)	1582
Alw26I	GTCTC	3 cut(s)	416, 918, 981
AlwI	GGATC	6 cut(s)	39, 63, 76, 543, 601, 624
AlwNI	CAGNNNCTG	3 cut(s)	38, 412, 1633
Ama87I	CYCGRG	1 cut(s)	430
Aor51HI	AGCGCT	1 cut(s)	24
AoxI	GGCC	4 cut(s)	128, 561, 678, 1489
ApeKI	GCWGC	4 cut(s)	406, 409, 1037, 1117
ApoI	RAATTY	1 cut(s)	1779
ArsI	GACNNNNNNTTYG	2 cut(s)	596, 628
Asp700I	GAANNNNTTC	1 cut(s)	1763
AspLEI	GCGC	3 cut(s)	19, 25, 221
AspS9I	GGNCC	5 cut(s)	129, 229, 1054, 1490, 1528
AsuC2I	CCSGG	1 cut(s)	49
AsuHPI	GGTGA	4 cut(s)	133, 314, 586, 744
AsuNHI	GCTAGC	1 cut(s)	25
AvaI	CYCGRG	1 cut(s)	430
AvaII	GGWCC	3 cut(s)	229, 1054, 1528
BaeI	ACNNNNGTAYC	2 cut(s)	949, 982
BalI	TGGCCA	1 cut(s)	680
BamHI	GGATCC	1 cut(s)	68
BanI	GGYRCC	1 cut(s)	218
BanII	GRGCYC	1 cut(s)	58
BarI	GAAGNNNNNNTAC	2 cut(s)	868, 900
BbsI	GAAGAC	3 cut(s)	504, 1109, 1686
Bbv12I	GWGCWC	1 cut(s)	1582
BbvCI	CCTCAGC	3 cut(s)	31, 413, 1644
BbvI	GCAGC	4 cut(s)	396, 418, 1024, 1104
BccI	CCATC	7 cut(s)	326, 571, 650, 980, 1451, 1472, 1550
BceAI	ACGGC	2 cut(s)	143, 1275
BciT130I	CCWGG	4 cut(s)	112, 181, 863, 1406
BcnI	CCSGG	1 cut(s)	49
BcoDI	GTCTC	3 cut(s)	416, 918, 981
BcuI	ACTAGT	1 cut(s)	1136
BfaI	CTAG	5 cut(s)	26, 59, 758, 1029, 1137
BfmI	CTRYAG	1 cut(s)	1038
BfoI	RGCGCY	2 cut(s)	26, 222
BfrI	CTTAAG	2 cut(s)	1019, 1745
BfuAI	ACCTGC	1 cut(s)	1031
BglII	AGATCT	2 cut(s)	743, 1534
BisI	GCNGC	7 cut(s)	76, 217, 407, 410, 1038, 1118, 1717
BlsI	GCNGC	7 cut(s)	77, 218, 408, 411, 1039, 1119, 1718
Bme1390I	CCNGG	5 cut(s)	49, 112, 181, 863, 1406
Bme18I	GGWCC	3 cut(s)	229, 1054, 1528
BmeT110I	CYCGRG	1 cut(s)	430
BmgT120I	GGNCC	5 cut(s)	129, 229, 1054, 1490, 1528
BmiI	GGNNCC	8 cut(s)	70, 131, 220, 664, 1056, 1516, 1530, 1591
BmrFI	CCNGG	5 cut(s)	49, 112, 181, 863, 1406
BmrI	ACTGGG	2 cut(s)	662, 855
BmsI	GCATC	2 cut(s)	722, 1204
BmtI	GCTAGC	1 cut(s)	29
BmuI	ACTGGG	2 cut(s)	662, 855
BpiI	GAAGAC	3 cut(s)	504, 1109, 1686
BplI	GAGNNNNNCTC	2 cut(s)	413, 445
BpmI	CTGGAG	1 cut(s)	1753
Bpu10I	CCTNAGC	4 cut(s)	31, 413, 908, 1644
BpuEI	CTTGAG	2 cut(s)	309, 1448
BpuMI	CCSGG	1 cut(s)	49
BsaBI	GATNNNNATC	1 cut(s)	748
BsaHI	GRCGYC	1 cut(s)	219
BsaI	GGTCTC	2 cut(s)	416, 918
BsaJI	CCNNGG	3 cut(s)	707, 1674, 1717
BsaXI	ACNNNNNCTCC	6 cut(s)	100, 130, 572, 602, 1506, 1536
Bsc4I	CCNNNNNNNGG	7 cut(s)	126, 432, 570, 845, 1064, 1411, 1511
Bse1I	ACTGG	4 cut(s)	668, 850, 1518, 1760
Bse8I	GATNNNNATC	1 cut(s)	748
BseBI	CCWGG	4 cut(s)	112, 181, 863, 1406
BseDI	CCNNGG	3 cut(s)	707, 1674, 1717
BseGI	GGATG	1 cut(s)	442
BseJI	GATNNNNATC	1 cut(s)	748
BseLI	CCNNNNNNNGG	7 cut(s)	126, 432, 570, 845, 1064, 1411, 1511
BseMII	CTCAG	3 cut(s)	45, 404, 1658
BseNI	ACTGG	4 cut(s)	668, 850, 1518, 1760
BseRI	GAGGAG	3 cut(s)	144, 226, 253
BseXI	GCAGC	4 cut(s)	396, 418, 1024, 1104
BseYI	CCCAGC	1 cut(s)	1638
Bsh1236I	CGCG	2 cut(s)	503, 1719
BshFI	GGCC	4 cut(s)	130, 563, 680, 1491
BshNI	GGYRCC	1 cut(s)	218
BsiHKAI	GWGCWC	1 cut(s)	1582
BsiHKCI	CYCGRG	1 cut(s)	430
BsiSI	CCGG	4 cut(s)	49, 66, 72, 222
BslFI	GGGAC	4 cut(s)	370, 845, 1156, 1514
BslI	CCNNNNNNNGG	7 cut(s)	126, 432, 570, 845, 1064, 1411, 1511
BsmAI	GTCTC	3 cut(s)	416, 918, 981
BsmFI	GGGAC	4 cut(s)	370, 845, 1156, 1514
BsmI	GAATGC	1 cut(s)	1763
BsnI	GGCC	4 cut(s)	130, 563, 680, 1491
Bso31I	GGTCTC	2 cut(s)	416, 918
BsoBI	CYCGRG	1 cut(s)	430
Bsp1286I	GDGCHC	2 cut(s)	58, 1582
Bsp1407I	TGTACA	1 cut(s)	687
Bsp143I	GATC	7 cut(s)	44, 68, 535, 593, 616, 743, 1534
Bsp19I	CCATGG	2 cut(s)	707, 1674
BspACI	CCGC	9 cut(s)	75, 102, 135, 216, 247, 503, 1667, 1717, 1719
BspANI	GGCC	4 cut(s)	130, 563, 680, 1491
BspCNI	CTCAG	3 cut(s)	44, 405, 1657
BspFNI	CGCG	2 cut(s)	503, 1719
BspHI	TCATGA	1 cut(s)	1381
BspLI	GGNNCC	8 cut(s)	70, 131, 220, 664, 1056, 1516, 1530, 1591
BspMAI	CTGCAG	1 cut(s)	1042
BspMI	ACCTGC	1 cut(s)	1031
BspOI	GCTAGC	1 cut(s)	29
BspPI	GGATC	6 cut(s)	39, 63, 76, 543, 601, 624
BspT107I	GGYRCC	1 cut(s)	218
BspTI	CTTAAG	2 cut(s)	1019, 1745
BspTNI	GGTCTC	2 cut(s)	416, 918
BsrBI	CCGCTC	2 cut(s)	104, 249
BsrGI	TGTACA	1 cut(s)	687
BsrI	ACTGG	4 cut(s)	668, 850, 1518, 1760
BssECI	CCNNGG	3 cut(s)	707, 1674, 1717
BssMI	GATC	7 cut(s)	44, 68, 535, 593, 616, 743, 1534
BssNI	GRCGYC	1 cut(s)	219
BssT1I	CCWWGG	2 cut(s)	707, 1674
Bst2UI	CCWGG	4 cut(s)	112, 181, 863, 1406
Bst4CI	ACNGT	7 cut(s)	145, 370, 1182, 1276, 1577, 1601, 1702
Bst6I	CTCTTC	4 cut(s)	271, 277, 578, 871
BstACI	GRCGYC	1 cut(s)	219
BstAFI	CTTAAG	2 cut(s)	1019, 1745
BstAUI	TGTACA	1 cut(s)	687
BstC8I	GCNNGC	7 cut(s)	21, 27, 54, 177, 396, 696, 840
BstDEI	CTNAG	5 cut(s)	31, 413, 888, 908, 1644
BstDSI	CCRYGG	3 cut(s)	707, 1674, 1717
BstENI	CCTNNNNNAGG	2 cut(s)	430, 1409
BstF5I	GGATG	1 cut(s)	442
BstFNI	CGCG	2 cut(s)	503, 1719
BstH2I	RGCGCY	2 cut(s)	26, 222
BstHHI	GCGC	3 cut(s)	19, 25, 221
BstKTI	GATC	7 cut(s)	47, 71, 538, 596, 619, 746, 1537
BstMAI	GTCTC	3 cut(s)	416, 918, 981
BstMBI	GATC	7 cut(s)	44, 68, 535, 593, 616, 743, 1534
BstMWI	GCNNNNNNNGC	4 cut(s)	62, 415, 1488, 1639
BstNI	CCWGG	4 cut(s)	112, 181, 863, 1406
BstNSI	RCATGY	2 cut(s)	398, 694
BstSCI	CCNGG	5 cut(s)	47, 110, 179, 861, 1404
BstSFI	CTRYAG	1 cut(s)	1038
BstUI	CGCG	2 cut(s)	503, 1719
BstV1I	GCAGC	4 cut(s)	396, 418, 1024, 1104
BstV2I	GAAGAC	3 cut(s)	504, 1109, 1686
BstX2I	RGATCY	5 cut(s)	44, 68, 535, 743, 1534
BstYI	RGATCY	5 cut(s)	44, 68, 535, 743, 1534
BsuRI	GGCC	4 cut(s)	130, 563, 680, 1491
BtgI	CCRYGG	3 cut(s)	707, 1674, 1717
BtsCI	GGATG	1 cut(s)	442
BtsI	GCAGTG	2 cut(s)	1343, 1662
BtsIMutI	CAGTG	5 cut(s)	492, 1343, 1525, 1582, 1662
BveI	ACCTGC	1 cut(s)	1031
Cac8I	GCNNGC	7 cut(s)	21, 27, 54, 177, 396, 696, 840
CaiI	CAGNNNCTG	3 cut(s)	38, 412, 1633
CciI	TCATGA	1 cut(s)	1381
CfoI	GCGC	3 cut(s)	19, 25, 221
Cfr13I	GGNCC	5 cut(s)	129, 229, 1054, 1490, 1528
Cfr42I	CCGCGG	1 cut(s)	1720
CseI	GACGC	2 cut(s)	24, 509
Csp6I	GTAC	5 cut(s)	108, 486, 688, 885, 966
CviQI	GTAC	5 cut(s)	108, 486, 688, 885, 966
DdeI	CTNAG	5 cut(s)	31, 413, 888, 908, 1644
DinI	GGCGCC	1 cut(s)	220
DpnI	GATC	7 cut(s)	46, 70, 537, 595, 618, 745, 1536
DpnII	GATC	7 cut(s)	44, 68, 535, 593, 616, 743, 1534
DraIII	CACNNNGTG	1 cut(s)	644
EaeI	YGGCCR	1 cut(s)	678
Eam1104I	CTCTTC	4 cut(s)	271, 277, 578, 871
EarI	CTCTTC	4 cut(s)	271, 277, 578, 871
Eco130I	CCWWGG	2 cut(s)	707, 1674
Eco24I	GRGCYC	1 cut(s)	58
Eco31I	GGTCTC	2 cut(s)	416, 918
Eco47I	GGWCC	3 cut(s)	229, 1054, 1528
Eco47III	AGCGCT	1 cut(s)	24
Eco57I	CTGAAG	3 cut(s)	258, 516, 1284
Eco88I	CYCGRG	1 cut(s)	430
EcoNI	CCTNNNNNAGG	2 cut(s)	430, 1409
EcoO109I	RGGNCCY	2 cut(s)	229, 1528
EcoRII	CCWGG	4 cut(s)	110, 179, 861, 1404
EcoT14I	CCWWGG	2 cut(s)	707, 1674
EcoT38I	GRGCYC	1 cut(s)	58
EgeI	GGCGCC	1 cut(s)	220
EheI	GGCGCC	1 cut(s)	220
ErhI	CCWWGG	2 cut(s)	707, 1674
FaqI	GGGAC	4 cut(s)	370, 845, 1156, 1514
FauI	CCCGC	2 cut(s)	109, 142
FblI	GTMKAC	1 cut(s)	1316
Fnu4HI	GCNGC	7 cut(s)	76, 217, 407, 410, 1038, 1118, 1717
FokI	GGATG	1 cut(s)	449
FriOI	GRGCYC	1 cut(s)	58
Fsp4HI	GCNGC	7 cut(s)	76, 217, 407, 410, 1038, 1118, 1717
FspBI	CTAG	5 cut(s)	26, 59, 758, 1029, 1137
FspI	TGCGCA	1 cut(s)	18
GlaI	GCGC	3 cut(s)	18, 24, 220
GluI	GCNGC	7 cut(s)	76, 217, 407, 410, 1038, 1118, 1717
GsaI	CCCAGC	1 cut(s)	1642
GsuI	CTGGAG	1 cut(s)	1753
HaeII	RGCGCY	2 cut(s)	26, 222
HaeIII	GGCC	4 cut(s)	130, 563, 680, 1491
HapII	CCGG	4 cut(s)	49, 66, 72, 222
HgaI	GACGC	2 cut(s)	24, 509
HhaI	GCGC	3 cut(s)	19, 25, 221
Hin1I	GRCGYC	1 cut(s)	219
Hin6I	GCGC	3 cut(s)	17, 23, 219
HinP1I	GCGC	3 cut(s)	17, 23, 219
HinfI	GANTC	7 cut(s)	5, 115, 254, 474, 833, 1024, 1496
HpaII	CCGG	4 cut(s)	49, 66, 72, 222
HphI	GGTGA	4 cut(s)	133, 314, 586, 744
Hpy166II	GTNNAC	1 cut(s)	1317
Hpy188I	TCNGA	9 cut(s)	40, 89, 253, 277, 364, 559, 616, 1090, 1539
Hpy188III	TCNNGA	7 cut(s)	158, 326, 430, 471, 953, 1382, 1770
Hpy8I	GTNNAC	1 cut(s)	1317
Hpy99I	CGWCG	2 cut(s)	99, 296
HpyAV	CCTTC	7 cut(s)	148, 293, 436, 729, 930, 1308, 1426
HpyCH4III	ACNGT	7 cut(s)	145, 370, 1182, 1276, 1577, 1601, 1702
HpyCH4IV	ACGT	1 cut(s)	1092
HpyF10VI	GCNNNNNNNGC	4 cut(s)	62, 415, 1488, 1639
HpyF3I	CTNAG	5 cut(s)	31, 413, 888, 908, 1644
HpySE526I	ACGT	1 cut(s)	1092
Hsp92I	GRCGYC	1 cut(s)	219
HspAI	GCGC	3 cut(s)	17, 23, 219
KasI	GGCGCC	1 cut(s)	218
KspI	CCGCGG	1 cut(s)	1720
Kzo9I	GATC	7 cut(s)	44, 68, 535, 593, 616, 743, 1534
LmnI	GCTCC	6 cut(s)	254, 1127, 1514, 1585, 1595, 1630
Lsp1109I	GCAGC	4 cut(s)	396, 418, 1024, 1104
LweI	GCATC	2 cut(s)	722, 1204
MaeI	CTAG	5 cut(s)	26, 59, 758, 1029, 1137
MaeII	ACGT	1 cut(s)	1092
MaeIII	GTNAC	4 cut(s)	287, 1093, 1270, 1393
MalI	GATC	7 cut(s)	46, 70, 537, 595, 618, 745, 1536
MbiI	CCGCTC	2 cut(s)	104, 249
MboI	GATC	7 cut(s)	44, 68, 535, 593, 616, 743, 1534
MfeI	CAATTG	4 cut(s)	399, 795, 1161, 1322
MflI	RGATCY	5 cut(s)	44, 68, 535, 743, 1534
MhlI	GDGCHC	2 cut(s)	58, 1582
MlsI	TGGCCA	1 cut(s)	680
MluNI	TGGCCA	1 cut(s)	680
Mly113I	GGCGCC	1 cut(s)	219
MlyI	GAGTC	3 cut(s)	109, 483, 827
MmeI	TCCRAC	1 cut(s)	594
Mox20I	TGGCCA	1 cut(s)	680
MroXI	GAANNNNTTC	1 cut(s)	1763
MscI	TGGCCA	1 cut(s)	680
MseI	TTAA	7 cut(s)	452, 465, 774, 1020, 1046, 1655, 1746
Msp20I	TGGCCA	1 cut(s)	680
MspA1I	CMGCKG	5 cut(s)	216, 409, 551, 1037, 1719
MspCI	CTTAAG	2 cut(s)	1019, 1745
MspI	CCGG	4 cut(s)	49, 66, 72, 222
MspR9I	CCNGG	5 cut(s)	49, 112, 181, 863, 1406
MunI	CAATTG	4 cut(s)	399, 795, 1161, 1322
Mva1269I	GAATGC	1 cut(s)	1763
MvaI	CCWGG	4 cut(s)	112, 181, 863, 1406
MvnI	CGCG	2 cut(s)	503, 1719
MwoI	GCNNNNNNNGC	4 cut(s)	62, 415, 1488, 1639
NarI	GGCGCC	1 cut(s)	219
NciI	CCSGG	1 cut(s)	49
NcoI	CCATGG	2 cut(s)	707, 1674
NdeII	GATC	7 cut(s)	44, 68, 535, 593, 616, 743, 1534
NheI	GCTAGC	1 cut(s)	25
NlaIV	GGNNCC	8 cut(s)	70, 131, 220, 664, 1056, 1516, 1530, 1591
NmuCI	GTSAC	2 cut(s)	287, 1270
NsbI	TGCGCA	1 cut(s)	18
NspI	RCATGY	2 cut(s)	398, 694
PaeI	GCATGC	1 cut(s)	398
PaeR7I	CTCGAG	1 cut(s)	430
PagI	TCATGA	1 cut(s)	1381
PcsI	WCGNNNNNNNCGW	2 cut(s)	103, 880
PctI	GAATGC	1 cut(s)	1763
PdmI	GAANNNNTTC	1 cut(s)	1763
PfeI	GAWTC	4 cut(s)	5, 254, 1024, 1496
PflMI	CCANNNNNTGG	1 cut(s)	570
PfoI	TCCNGGA	1 cut(s)	861
PkrI	GCNGC	7 cut(s)	77, 218, 408, 411, 1039, 1119, 1718
PleI	GAGTC	3 cut(s)	109, 482, 827
PluTI	GGCGCC	1 cut(s)	222
PpsI	GAGTC	3 cut(s)	109, 482, 827
PpuMI	RGGWCCY	2 cut(s)	229, 1528
Psp5II	RGGWCCY	2 cut(s)	229, 1528
Psp6I	CCWGG	4 cut(s)	110, 179, 861, 1404
PspFI	CCCAGC	1 cut(s)	1638
PspGI	CCWGG	4 cut(s)	110, 179, 861, 1404
PspN4I	GGNNCC	8 cut(s)	70, 131, 220, 664, 1056, 1516, 1530, 1591
PspPI	GGNCC	5 cut(s)	129, 229, 1054, 1490, 1528
PspPPI	RGGWCCY	2 cut(s)	229, 1528
PstI	CTGCAG	1 cut(s)	1042
PstNI	CAGNNNCTG	3 cut(s)	38, 412, 1633
PsuI	RGATCY	5 cut(s)	44, 68, 535, 743, 1534
PvuII	CAGCTG	3 cut(s)	409, 551, 1037
RsaI	GTAC	5 cut(s)	109, 487, 689, 886, 967
RsaNI	GTAC	5 cut(s)	108, 486, 688, 885, 966
SacII	CCGCGG	1 cut(s)	1720
SaqAI	TTAA	7 cut(s)	452, 465, 774, 1020, 1046, 1655, 1746
SatI	GCNGC	7 cut(s)	76, 217, 407, 410, 1038, 1118, 1717
Sau3AI	GATC	7 cut(s)	44, 68, 535, 593, 616, 743, 1534
Sau96I	GGNCC	5 cut(s)	129, 229, 1054, 1490, 1528
SchI	GAGTC	3 cut(s)	109, 483, 827
ScrFI	CCNGG	5 cut(s)	49, 112, 181, 863, 1406
SduI	GDGCHC	2 cut(s)	58, 1582
SfaNI	GCATC	2 cut(s)	722, 1204
SfcI	CTRYAG	1 cut(s)	1038
SfoI	GGCGCC	1 cut(s)	220
Sfr274I	CTCGAG	1 cut(s)	430
Sfr303I	CCGCGG	1 cut(s)	1720
SgrBI	CCGCGG	1 cut(s)	1720
SinI	GGWCC	3 cut(s)	229, 1054, 1528
SlaI	CTCGAG	1 cut(s)	430
SmlI	CTYRAG	5 cut(s)	324, 430, 1019, 1427, 1745
SmoI	CTYRAG	5 cut(s)	324, 430, 1019, 1427, 1745
SpeI	ACTAGT	1 cut(s)	1136
SphI	GCATGC	1 cut(s)	398
SsiI	CCGC	9 cut(s)	75, 102, 135, 216, 247, 503, 1667, 1717, 1719
SspDI	GGCGCC	1 cut(s)	218
SspMI	CTAG	5 cut(s)	26, 59, 758, 1029, 1137
StyD4I	CCNGG	5 cut(s)	47, 110, 179, 861, 1404
StyI	CCWWGG	2 cut(s)	707, 1674
TaaI	ACNGT	7 cut(s)	145, 370, 1182, 1276, 1577, 1601, 1702
TaiI	ACGT	1 cut(s)	1095
TaqI	TCGA	5 cut(s)	431, 470, 608, 926, 1446
TatI	WGTACW	1 cut(s)	687
TauI	GCSGC	3 cut(s)	78, 219, 1719
TfiI	GAWTC	4 cut(s)	5, 254, 1024, 1496
Tru1I	TTAA	7 cut(s)	452, 465, 774, 1020, 1046, 1655, 1746
Tru9I	TTAA	7 cut(s)	452, 465, 774, 1020, 1046, 1655, 1746
TscAI	CASTG	5 cut(s)	499, 1350, 1525, 1582, 1669
TseFI	GTSAC	2 cut(s)	287, 1270
TseI	GCWGC	4 cut(s)	406, 409, 1037, 1117
Tsp45I	GTSAC	2 cut(s)	287, 1270
TspDTI	ATGAA	5 cut(s)	175, 792, 1268, 1479, 1557
TspGWI	ACGGA	2 cut(s)	548, 1112
TspRI	CASTG	5 cut(s)	499, 1350, 1525, 1582, 1669
Van91I	CCANNNNNTGG	1 cut(s)	570
Vha464I	CTTAAG	2 cut(s)	1019, 1745
VpaK11BI	GGWCC	3 cut(s)	229, 1054, 1528
XagI	CCTNNNNNAGG	2 cut(s)	430, 1409
XapI	RAATTY	1 cut(s)	1779
XceI	RCATGY	2 cut(s)	398, 694
XhoI	CTCGAG	1 cut(s)	430
XmiI	GTMKAC	1 cut(s)	1316
XmnI	GAANNNNTTC	1 cut(s)	1763
XspI	CTAG	5 cut(s)	26, 59, 758, 1029, 1137

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.