Calcium-binding EF hand family protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G32060 AT4G32060 |
| fragaria_vesca | FvH4_2g28590 FvH4_2g28590 |
| malus_domestica | MD08G1152800.v1.1 MD15G1129400.v1.1 |
| prunus_persica | Prupe.1G485000_v2.0.a1 Prupe.1G485000_v2.0.a1 Prupe.1G485000_v2.0.a1 Prupe.1G485000_v2.0.a1 Prupe.1G485000_v2.0.a1 Prupe.1G485000_v2.0.a1 |
| pyrus_communis | pycom08g13170 pycom15g11660 |
| rosa_chinensis | RchiOBHm_Chr6g0297361 |
| rosa_laevigata | RLG00000011608 |
| rosa_multiflora | Rmu_ssc0000109.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00170610 |
| rosa_rugosa | Rorug06G0270900 Rorug06G0271000 |
| rosa_samantha | Rh6AG382400 Rh6BG390500 Rh6CG395600 Rh6DG382600 |
| rosa_wichuraiana | Rw6G033310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 6 cut(s) | 6, 213, 1082, 1142, 1284, 1390 |
| AclI | AACGTT | 1 cut(s) | 445 |
| AclWI | GGATC | 7 cut(s) | 76, 89, 140, 181, 197, 204, 217 |
| AcoI | YGGCCR | 2 cut(s) | 850, 1050 |
| AcsI | RAATTY | 3 cut(s) | 962, 1175, 1366 |
| AcuI | CTGAAG | 2 cut(s) | 1011, 1190 |
| AfaI | GTAC | 3 cut(s) | 160, 485, 1451 |
| AfeI | AGCGCT | 1 cut(s) | 1227 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 219 |
| AgeI | ACCGGT | 1 cut(s) | 887 |
| AgsI | TTSAA | 7 cut(s) | 154, 306, 433, 694, 757, 1180, 1276 |
| AjiI | CACGTC | 1 cut(s) | 1417 |
| AjnI | CCWGG | 2 cut(s) | 376, 619 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 909, 941 |
| AluBI | AGCT | 7 cut(s) | 93, 206, 387, 741, 1108, 1195, 1247 |
| AluI | AGCT | 7 cut(s) | 93, 206, 387, 741, 1108, 1195, 1247 |
| Alw26I | GTCTC | 2 cut(s) | 169, 1449 |
| AlwI | GGATC | 7 cut(s) | 76, 89, 140, 181, 197, 204, 217 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1085 |
| Aor51HI | AGCGCT | 1 cut(s) | 1227 |
| AoxI | GGCC | 3 cut(s) | 850, 862, 1050 |
| ApeKI | GCWGC | 3 cut(s) | 90, 1079, 1108 |
| ApoI | RAATTY | 3 cut(s) | 962, 1175, 1366 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1427, 1459 |
| AsiGI | ACCGGT | 1 cut(s) | 887 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 425, 1175, 1271 |
| AspLEI | GCGC | 2 cut(s) | 143, 1228 |
| AspS9I | GGNCC | 2 cut(s) | 234, 1211 |
| AsuC2I | CCSGG | 2 cut(s) | 196, 1151 |
| AsuHPI | GGTGA | 2 cut(s) | 184, 635 |
| AsuII | TTCGAA | 2 cut(s) | 499, 868 |
| AvaII | GGWCC | 2 cut(s) | 234, 1211 |
| AxyI | CCTNAGG | 1 cut(s) | 217 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1144, 1177 |
| BalI | TGGCCA | 1 cut(s) | 852 |
| BamHI | GGATCC | 2 cut(s) | 81, 209 |
| BbvCI | CCTCAGC | 1 cut(s) | 1001 |
| BbvI | GCAGC | 3 cut(s) | 102, 1091, 1095 |
| BceAI | ACGGC | 1 cut(s) | 103 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 470, 504 |
| BciT130I | CCWGG | 2 cut(s) | 378, 621 |
| BcnI | CCSGG | 2 cut(s) | 196, 1151 |
| BcoDI | GTCTC | 2 cut(s) | 169, 1449 |
| BfaI | CTAG | 2 cut(s) | 584, 1223 |
| BfmI | CTRYAG | 1 cut(s) | 19 |
| BfoI | RGCGCY | 1 cut(s) | 1229 |
| BglII | AGATCT | 2 cut(s) | 423, 982 |
| BisI | GCNGC | 5 cut(s) | 91, 1080, 1083, 1109, 1284 |
| BlsI | GCNGC | 5 cut(s) | 92, 1081, 1084, 1110, 1285 |
| BmcAI | AGTACT | 1 cut(s) | 485 |
| Bme1390I | CCNGG | 4 cut(s) | 196, 378, 621, 1151 |
| Bme18I | GGWCC | 2 cut(s) | 234, 1211 |
| BmgBI | CACGTC | 1 cut(s) | 1417 |
| BmgT120I | GGNCC | 2 cut(s) | 234, 1211 |
| BmiI | GGNNCC | 2 cut(s) | 83, 211 |
| BmrFI | CCNGG | 4 cut(s) | 196, 378, 621, 1151 |
| BmrI | ACTGGG | 1 cut(s) | 615 |
| BmsI | GCATC | 8 cut(s) | 397, 500, 623, 813, 987, 1078, 1153, 1408 |
| BmuI | ACTGGG | 1 cut(s) | 615 |
| BpmI | CTGGAG | 1 cut(s) | 1028 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1001 |
| Bpu14I | TTCGAA | 2 cut(s) | 499, 868 |
| BpuMI | CCSGG | 2 cut(s) | 196, 1151 |
| BsaAI | YACGTR | 1 cut(s) | 1199 |
| BsaBI | GATNNNNATC | 1 cut(s) | 28 |
| BsaI | GGTCTC | 1 cut(s) | 169 |
| BsaJI | CCNNGG | 1 cut(s) | 85 |
| BsaWI | WCCGGW | 1 cut(s) | 887 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 897, 927 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 219 |
| Bse118I | RCCGGY | 2 cut(s) | 529, 887 |
| Bse1I | ACTGG | 1 cut(s) | 610 |
| Bse21I | CCTNAGG | 1 cut(s) | 217 |
| Bse8I | GATNNNNATC | 1 cut(s) | 28 |
| BseBI | CCWGG | 2 cut(s) | 378, 621 |
| BseDI | CCNNGG | 1 cut(s) | 85 |
| BseGI | GGATG | 4 cut(s) | 66, 907, 1384, 1469 |
| BseJI | GATNNNNATC | 1 cut(s) | 28 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 219 |
| BseMII | CTCAG | 7 cut(s) | 91, 736, 845, 992, 1121, 1304, 1470 |
| BseNI | ACTGG | 1 cut(s) | 610 |
| BseXI | GCAGC | 3 cut(s) | 102, 1091, 1095 |
| BshFI | GGCC | 3 cut(s) | 852, 864, 1052 |
| BshTI | ACCGGT | 1 cut(s) | 887 |
| BsiSI | CCGG | 5 cut(s) | 138, 195, 530, 888, 1150 |
| BslFI | GGGAC | 3 cut(s) | 539, 1166, 1427 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 219 |
| BsmAI | GTCTC | 2 cut(s) | 169, 1449 |
| BsmFI | GGGAC | 3 cut(s) | 539, 1166, 1427 |
| BsmI | GAATGC | 1 cut(s) | 726 |
| BsnI | GGCC | 3 cut(s) | 852, 864, 1052 |
| Bso31I | GGTCTC | 1 cut(s) | 169 |
| Bsp119I | TTCGAA | 2 cut(s) | 499, 868 |
| BspACI | CCGC | 6 cut(s) | 6, 213, 1082, 1142, 1284, 1390 |
| BspANI | GGCC | 3 cut(s) | 852, 864, 1052 |
| BspCNI | CTCAG | 7 cut(s) | 90, 735, 844, 993, 1122, 1303, 1469 |
| BspLI | GGNNCC | 2 cut(s) | 83, 211 |
| BspPI | GGATC | 7 cut(s) | 76, 89, 140, 181, 197, 204, 217 |
| BspQI | GCTCTTC | 1 cut(s) | 100 |
| BspT104I | TTCGAA | 2 cut(s) | 499, 868 |
| BspTNI | GGTCTC | 1 cut(s) | 169 |
| BsrFI | RCCGGY | 2 cut(s) | 529, 887 |
| BsrI | ACTGG | 1 cut(s) | 610 |
| BssAI | RCCGGY | 2 cut(s) | 529, 887 |
| BssECI | CCNNGG | 1 cut(s) | 85 |
| Bst2UI | CCWGG | 2 cut(s) | 378, 621 |
| Bst4CI | ACNGT | 5 cut(s) | 42, 163, 811, 1185, 1484 |
| Bst6I | CTCTTC | 5 cut(s) | 100, 792, 987, 1030, 1399 |
| BstBAI | YACGTR | 1 cut(s) | 1199 |
| BstBI | TTCGAA | 2 cut(s) | 499, 868 |
| BstC8I | GCNNGC | 3 cut(s) | 6, 1093, 1106 |
| BstDSI | CCRYGG | 1 cut(s) | 85 |
| BstF5I | GGATG | 4 cut(s) | 66, 907, 1384, 1469 |
| BstH2I | RGCGCY | 1 cut(s) | 1229 |
| BstHHI | GCGC | 2 cut(s) | 143, 1228 |
| BstMAI | GTCTC | 2 cut(s) | 169, 1449 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 212, 832, 1088, 1101, 1232, 1396 |
| BstNI | CCWGG | 2 cut(s) | 378, 621 |
| BstNSI | RCATGY | 1 cut(s) | 1159 |
| BstSCI | CCNGG | 4 cut(s) | 194, 376, 619, 1149 |
| BstSFI | CTRYAG | 1 cut(s) | 19 |
| BstSNI | TACGTA | 1 cut(s) | 1199 |
| BstV1I | GCAGC | 3 cut(s) | 102, 1091, 1095 |
| BstX2I | RGATCY | 6 cut(s) | 81, 145, 173, 209, 423, 982 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 860 |
| BstYI | RGATCY | 6 cut(s) | 81, 145, 173, 209, 423, 982 |
| Bsu36I | CCTNAGG | 1 cut(s) | 217 |
| BsuRI | GGCC | 3 cut(s) | 852, 864, 1052 |
| BtgI | CCRYGG | 1 cut(s) | 85 |
| BtrI | CACGTC | 1 cut(s) | 1417 |
| BtsCI | GGATG | 4 cut(s) | 66, 907, 1384, 1469 |
| BtsI | GCAGTG | 1 cut(s) | 753 |
| BtsIMutI | CAGTG | 3 cut(s) | 753, 816, 1166 |
| Cac8I | GCNNGC | 3 cut(s) | 6, 1093, 1106 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1085 |
| CfoI | GCGC | 2 cut(s) | 143, 1228 |
| Cfr10I | RCCGGY | 2 cut(s) | 529, 887 |
| Cfr13I | GGNCC | 2 cut(s) | 234, 1211 |
| CseI | GACGC | 1 cut(s) | 114 |
| Csp6I | GTAC | 3 cut(s) | 159, 484, 1450 |
| CspAI | ACCGGT | 1 cut(s) | 887 |
| CviAII | CATG | 3 cut(s) | 655, 1156, 1340 |
| CviQI | GTAC | 3 cut(s) | 159, 484, 1450 |
| EaeI | YGGCCR | 2 cut(s) | 850, 1050 |
| Eam1104I | CTCTTC | 5 cut(s) | 100, 792, 987, 1030, 1399 |
| EarI | CTCTTC | 5 cut(s) | 100, 792, 987, 1030, 1399 |
| EciI | GGCGGA | 1 cut(s) | 202 |
| Eco105I | TACGTA | 1 cut(s) | 1199 |
| Eco31I | GGTCTC | 1 cut(s) | 169 |
| Eco47I | GGWCC | 2 cut(s) | 234, 1211 |
| Eco47III | AGCGCT | 1 cut(s) | 1227 |
| Eco57I | CTGAAG | 2 cut(s) | 1011, 1190 |
| Eco81I | CCTNAGG | 1 cut(s) | 217 |
| EcoRI | GAATTC | 1 cut(s) | 1175 |
| EcoRII | CCWGG | 2 cut(s) | 376, 619 |
| FaeI | CATG | 3 cut(s) | 658, 1159, 1343 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 413, 445 |
| FaqI | GGGAC | 3 cut(s) | 539, 1166, 1427 |
| FatI | CATG | 3 cut(s) | 654, 1155, 1339 |
| FauI | CCCGC | 3 cut(s) | 13, 1149, 1383 |
| FauNDI | CATATG | 1 cut(s) | 882 |
| Fnu4HI | GCNGC | 5 cut(s) | 91, 1080, 1083, 1109, 1284 |
| FokI | GGATG | 4 cut(s) | 53, 914, 1391, 1476 |
| Fsp4HI | GCNGC | 5 cut(s) | 91, 1080, 1083, 1109, 1284 |
| FspBI | CTAG | 2 cut(s) | 584, 1223 |
| GlaI | GCGC | 2 cut(s) | 142, 1227 |
| GluI | GCNGC | 5 cut(s) | 91, 1080, 1083, 1109, 1284 |
| GsuI | CTGGAG | 1 cut(s) | 1028 |
| HaeII | RGCGCY | 1 cut(s) | 1229 |
| HaeIII | GGCC | 3 cut(s) | 852, 864, 1052 |
| HapII | CCGG | 5 cut(s) | 138, 195, 530, 888, 1150 |
| HgaI | GACGC | 1 cut(s) | 114 |
| HhaI | GCGC | 2 cut(s) | 143, 1228 |
| Hin1II | CATG | 3 cut(s) | 658, 1159, 1343 |
| Hin6I | GCGC | 2 cut(s) | 141, 1226 |
| HinP1I | GCGC | 2 cut(s) | 141, 1226 |
| HincII | GTYRAC | 1 cut(s) | 49 |
| HindII | GTYRAC | 1 cut(s) | 49 |
| HindIII | AAGCTT | 1 cut(s) | 739 |
| HpaII | CCGG | 5 cut(s) | 138, 195, 530, 888, 1150 |
| HphI | GGTGA | 2 cut(s) | 184, 635 |
| Hpy166II | GTNNAC | 5 cut(s) | 49, 159, 626, 1205, 1256 |
| Hpy188III | TCNNGA | 6 cut(s) | 79, 390, 467, 731, 1358, 1494 |
| Hpy8I | GTNNAC | 5 cut(s) | 49, 159, 626, 1205, 1256 |
| HpyCH4III | ACNGT | 5 cut(s) | 42, 163, 811, 1185, 1484 |
| HpyCH4IV | ACGT | 3 cut(s) | 445, 1198, 1416 |
| HpyCH4V | TGCA | 7 cut(s) | 491, 1016, 1064, 1079, 1091, 1399, 1433 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 212, 832, 1088, 1101, 1232, 1396 |
| HpySE526I | ACGT | 3 cut(s) | 445, 1198, 1416 |
| Hsp92II | CATG | 3 cut(s) | 658, 1159, 1343 |
| HspAI | GCGC | 2 cut(s) | 141, 1226 |
| LguI | GCTCTTC | 1 cut(s) | 100 |
| Lsp1109I | GCAGC | 3 cut(s) | 102, 1091, 1095 |
| LweI | GCATC | 8 cut(s) | 397, 500, 623, 813, 987, 1078, 1153, 1408 |
| MaeI | CTAG | 2 cut(s) | 584, 1223 |
| MaeII | ACGT | 3 cut(s) | 445, 1198, 1416 |
| MaeIII | GTNAC | 3 cut(s) | 380, 712, 876 |
| MfeI | CAATTG | 2 cut(s) | 549, 1428 |
| MflI | RGATCY | 6 cut(s) | 81, 145, 173, 209, 423, 982 |
| MlsI | TGGCCA | 1 cut(s) | 852 |
| MluCI | AATT | 9 cut(s) | 280, 365, 433, 549, 962, 1175, 1329, 1366, 1428 |
| MluNI | TGGCCA | 1 cut(s) | 852 |
| MlyI | GAGTC | 4 cut(s) | 69, 826, 1135, 1343 |
| MmeI | TCCRAC | 1 cut(s) | 94 |
| Mox20I | TGGCCA | 1 cut(s) | 852 |
| MroXI | GAANNNNTTC | 3 cut(s) | 425, 1175, 1271 |
| MscI | TGGCCA | 1 cut(s) | 852 |
| MseI | TTAA | 1 cut(s) | 804 |
| MslI | CAYNNNNRTG | 1 cut(s) | 858 |
| Msp20I | TGGCCA | 1 cut(s) | 852 |
| MspA1I | CMGCKG | 2 cut(s) | 206, 1082 |
| MspI | CCGG | 5 cut(s) | 138, 195, 530, 888, 1150 |
| MspR9I | CCNGG | 4 cut(s) | 196, 378, 621, 1151 |
| MunI | CAATTG | 2 cut(s) | 549, 1428 |
| Mva1269I | GAATGC | 1 cut(s) | 726 |
| MvaI | CCWGG | 2 cut(s) | 378, 621 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 212, 832, 1088, 1101, 1232, 1396 |
| NciI | CCSGG | 2 cut(s) | 196, 1151 |
| NdeI | CATATG | 1 cut(s) | 882 |
| NlaIII | CATG | 3 cut(s) | 658, 1159, 1343 |
| NlaIV | GGNNCC | 2 cut(s) | 83, 211 |
| NmuCI | GTSAC | 1 cut(s) | 712 |
| NspI | RCATGY | 1 cut(s) | 1159 |
| NspV | TTCGAA | 2 cut(s) | 499, 868 |
| PciSI | GCTCTTC | 1 cut(s) | 100 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 359 |
| PctI | GAATGC | 1 cut(s) | 726 |
| PdmI | GAANNNNTTC | 3 cut(s) | 425, 1175, 1271 |
| PfeI | GAWTC | 6 cut(s) | 110, 251, 393, 575, 734, 1354 |
| PfoI | TCCNGGA | 1 cut(s) | 1149 |
| PinAI | ACCGGT | 1 cut(s) | 887 |
| PkrI | GCNGC | 5 cut(s) | 92, 1081, 1084, 1110, 1285 |
| PleI | GAGTC | 4 cut(s) | 69, 825, 1134, 1343 |
| PpsI | GAGTC | 4 cut(s) | 69, 825, 1134, 1343 |
| Ppu21I | YACGTR | 1 cut(s) | 1199 |
| Psp1406I | AACGTT | 1 cut(s) | 445 |
| Psp6I | CCWGG | 2 cut(s) | 376, 619 |
| PspGI | CCWGG | 2 cut(s) | 376, 619 |
| PspN4I | GGNNCC | 2 cut(s) | 83, 211 |
| PspPI | GGNCC | 2 cut(s) | 234, 1211 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1085 |
| PsuI | RGATCY | 6 cut(s) | 81, 145, 173, 209, 423, 982 |
| PvuII | CAGCTG | 1 cut(s) | 206 |
| RsaI | GTAC | 3 cut(s) | 160, 485, 1451 |
| RsaNI | GTAC | 3 cut(s) | 159, 484, 1450 |
| RseI | CAYNNNNRTG | 1 cut(s) | 858 |
| SapI | GCTCTTC | 1 cut(s) | 100 |
| SaqAI | TTAA | 1 cut(s) | 804 |
| SatI | GCNGC | 5 cut(s) | 91, 1080, 1083, 1109, 1284 |
| Sau96I | GGNCC | 2 cut(s) | 234, 1211 |
| ScaI | AGTACT | 1 cut(s) | 485 |
| SchI | GAGTC | 4 cut(s) | 69, 826, 1135, 1343 |
| ScrFI | CCNGG | 4 cut(s) | 196, 378, 621, 1151 |
| SfaNI | GCATC | 8 cut(s) | 397, 500, 623, 813, 987, 1078, 1153, 1408 |
| SfcI | CTRYAG | 1 cut(s) | 19 |
| SfuI | TTCGAA | 2 cut(s) | 499, 868 |
| SinI | GGWCC | 2 cut(s) | 234, 1211 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 858 |
| SnaBI | TACGTA | 1 cut(s) | 1199 |
| Sse9I | AATT | 9 cut(s) | 280, 365, 433, 549, 962, 1175, 1329, 1366, 1428 |
| SsiI | CCGC | 6 cut(s) | 6, 213, 1082, 1142, 1284, 1390 |
| SspMI | CTAG | 2 cut(s) | 584, 1223 |
| StyD4I | CCNGG | 4 cut(s) | 194, 376, 619, 1149 |
| TaaI | ACNGT | 5 cut(s) | 42, 163, 811, 1185, 1484 |
| TaiI | ACGT | 3 cut(s) | 448, 1201, 1419 |
| TaqI | TCGA | 7 cut(s) | 480, 499, 868, 897, 1070, 1352, 1402 |
| TaqII | GACCGA | 1 cut(s) | 66 |
| TasI | AATT | 9 cut(s) | 280, 365, 433, 549, 962, 1175, 1329, 1366, 1428 |
| TatI | WGTACW | 1 cut(s) | 483 |
| TauI | GCSGC | 2 cut(s) | 1085, 1286 |
| TfiI | GAWTC | 6 cut(s) | 110, 251, 393, 575, 734, 1354 |
| Tru1I | TTAA | 1 cut(s) | 804 |
| Tru9I | TTAA | 1 cut(s) | 804 |
| TscAI | CASTG | 3 cut(s) | 753, 816, 1173 |
| TseFI | GTSAC | 1 cut(s) | 712 |
| TseI | GCWGC | 3 cut(s) | 90, 1079, 1108 |
| Tsp45I | GTSAC | 1 cut(s) | 712 |
| TspDTI | ATGAA | 6 cut(s) | 385, 539, 643, 992, 1280, 1328 |
| TspGWI | ACGGA | 2 cut(s) | 34, 138 |
| TspRI | CASTG | 3 cut(s) | 753, 816, 1173 |
| VpaK11BI | GGWCC | 2 cut(s) | 234, 1211 |
| XapI | RAATTY | 3 cut(s) | 962, 1175, 1366 |
| XceI | RCATGY | 1 cut(s) | 1159 |
| XmnI | GAANNNNTTC | 3 cut(s) | 425, 1175, 1271 |
| XspI | CTAG | 2 cut(s) | 584, 1223 |
| ZrmI | AGTACT | 1 cut(s) | 485 |