Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0014016

Physical Location & Seq

Genomic Coordinates Reverse (-)

15669219 .. 15671249

Gene Structure 2031 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G32470.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 369 bp

ATGGCGTCGCTTCTGAAAGCATTCATCGATCCAAAGAAGAACTTCCTCGCTCGTATGCATATGAAAGCCATATCTACTCGCCTTCGCAGATACGGTCTGAGGTACGATGATCTGTACGATCAGTATTACAGTATGGACATCAAAGAGGCTATGAACAGATTGCCCAGGGAGGTCGTTGATGCTCGTAACCAGCGTCTCAAGCGTGCCATGGACCTCTCCATGAAGCACGAGTACCTCCCCAAGGATCTTCAGGCGGTGCAGACCCCATTCCGTGGCTATCTTCAGGACATGCTTGCTCTTGTTGAGAGGGAAAGCAAGGAACGAGAGGCCTTGGGAGCTCTACCACTATACCAGCGCACACTCCCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0005746 GO:0005750 GO:0005773 GO:0005774 GO:0006091 GO:0006119 GO:0006122 GO:0006139 GO:0006163 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007005 GO:0008150 GO:0008152 GO:0009060 GO:0009117 GO:0009123 GO:0009126 GO:0009141 GO:0009144 GO:0009150 GO:0009161 GO:0009167 GO:0009199 GO:0009205 GO:0009259 GO:0009536 GO:0009987 GO:0015980 GO:0016020 GO:0016043 GO:0016310 GO:0017004 GO:0017062 GO:0017144 GO:0019637 GO:0019693 GO:0019866 GO:0022607 GO:0022900 GO:0022904 GO:0031090 GO:0031966 GO:0031967 GO:0031975 GO:0032991 GO:0033108 GO:0034551 GO:0034622 GO:0034641 GO:0042773 GO:0042775 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044281 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044437 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0045275 GO:0045333 GO:0046034 GO:0046483 GO:0055086 GO:0055114 GO:0065003 GO:0070069 GO:0070469 GO:0071704 GO:0071840 GO:0072521 GO:0098588 GO:0098796 GO:0098798 GO:0098800 GO:0098803 GO:0098805 GO:1901135 GO:1901360 GO:1901564 GO:1902494 GO:1990204

KEGG Pathways

Metabolic & Signaling

ko00190 ko01100 ko04260 ko04714 ko04932 ko05010 ko05012 ko05016 map00190 map01100 map04260 map04714 map04932 map05010 map05012 map05016

Pfam Domains

Protein Families

UCR_14kD

Protein Analysis

122

Amino Acids

14.53

Weight (kDa)

9.73

Isoelectric Point (pI)

38.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UCR_14kD	PF02271	16 - 98	7.4e-22	Ubiquinol-cytochrome C reductase complex 14kD subunit

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014016)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32470 AT5G25450
fragaria_vesca	FvH4_2g29690
malus_domestica	MD08G1143000.v1.1 MD15G1119900.v1.1
prunus_persica	Prupe.1G472700_v2.0.a1
pyrus_communis	pycom08g12170 pycom15g10800
rosa_chinensis	RchiOBHm_Chr6g0298671
rosa_laevigata	RLG00000011493
rosa_multiflora	Rmu_sc0008099.1_g000004 Rmu_sc0008142.1_g000004
rosa_roxburghii	Rroxscaffold_7G00169410
rosa_rugosa	Rorug06G0282500
rosa_samantha	Rh6BG401500 Rh6CG407400
rosa_wichuraiana	Rw6G034420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	272
AciI	CCGC	1 cut(s)	254
AclWI	GGATC	2 cut(s)	23, 252
AcuI	CTGAAG	2 cut(s)	233, 266
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	3 cut(s)	104, 116, 233
AfiI	CCNNNNNNNGG	2 cut(s)	241, 272
AjnI	CCWGG	1 cut(s)	164
AluBI	AGCT	1 cut(s)	338
AluI	AGCT	1 cut(s)	338
Alw21I	GWGCWC	1 cut(s)	340
Alw26I	GTCTC	1 cut(s)	200
AlwI	GGATC	2 cut(s)	23, 252
AoxI	GGCC	1 cut(s)	327
Asp700I	GAANNNNTTC	2 cut(s)	20, 41
AspLEI	GCGC	1 cut(s)	357
AspS9I	GGNCC	1 cut(s)	211
AvaII	GGWCC	1 cut(s)	211
BanII	GRGCYC	1 cut(s)	340
BarI	GAAGNNNNNNTAC	2 cut(s)	215, 247
BauI	CACGAG	1 cut(s)	227
Bbv12I	GWGCWC	1 cut(s)	340
BciT130I	CCWGG	1 cut(s)	166
BcoDI	GTCTC	1 cut(s)	200
Bme1390I	CCNGG	1 cut(s)	166
Bme18I	GGWCC	1 cut(s)	211
BmgT120I	GGNCC	1 cut(s)	211
BmrFI	CCNGG	1 cut(s)	166
BmsI	GCATC	1 cut(s)	169
BpuEI	CTTGAG	1 cut(s)	182
Bsa29I	ATCGAT	1 cut(s)	27
BsaHI	GRCGYC	1 cut(s)	5
BsaJI	CCNNGG	6 cut(s)	164, 165, 207, 240, 271, 330
Bsc4I	CCNNNNNNNGG	2 cut(s)	241, 272
BseBI	CCWGG	1 cut(s)	166
BseCI	ATCGAT	1 cut(s)	27
BseDI	CCNNGG	6 cut(s)	164, 165, 207, 240, 271, 330
BseLI	CCNNNNNNNGG	2 cut(s)	241, 272
BseMII	CTCAG	1 cut(s)	89
BsgI	GTGCAG	1 cut(s)	278
BshFI	GGCC	1 cut(s)	329
BshVI	ATCGAT	1 cut(s)	27
BsiHKAI	GWGCWC	1 cut(s)	340
BslI	CCNNNNNNNGG	2 cut(s)	241, 272
BsmAI	GTCTC	1 cut(s)	200
BsmBI	CGTCTC	1 cut(s)	200
BsmI	GAATGC	1 cut(s)	20
BsnI	GGCC	1 cut(s)	329
Bsp1286I	GDGCHC	1 cut(s)	340
Bsp143I	GATC	4 cut(s)	28, 109, 118, 244
Bsp19I	CCATGG	1 cut(s)	207
BspACI	CCGC	1 cut(s)	254
BspANI	GGCC	1 cut(s)	329
BspCNI	CTCAG	1 cut(s)	90
BspDI	ATCGAT	1 cut(s)	27
BspPI	GGATC	2 cut(s)	23, 252
BssECI	CCNNGG	6 cut(s)	164, 165, 207, 240, 271, 330
BssMI	GATC	4 cut(s)	28, 109, 118, 244
BssNI	GRCGYC	1 cut(s)	5
BssSI	CACGAG	1 cut(s)	227
BssT1I	CCWWGG	3 cut(s)	207, 240, 330
Bst2BI	CACGAG	1 cut(s)	227
Bst2UI	CCWGG	1 cut(s)	166
Bst4CI	ACNGT	2 cut(s)	95, 131
BstACI	GRCGYC	1 cut(s)	5
BstC8I	GCNNGC	2 cut(s)	204, 294
BstDEI	CTNAG	1 cut(s)	98
BstDSI	CCRYGG	2 cut(s)	207, 271
BstENI	CCTNNNNNAGG	1 cut(s)	239
BstHHI	GCGC	1 cut(s)	357
BstKTI	GATC	4 cut(s)	31, 112, 121, 247
BstMAI	GTCTC	1 cut(s)	200
BstMBI	GATC	4 cut(s)	28, 109, 118, 244
BstMWI	GCNNNNNNNGC	2 cut(s)	199, 335
BstNI	CCWGG	1 cut(s)	166
BstNSI	RCATGY	1 cut(s)	292
BstSCI	CCNGG	1 cut(s)	164
BstX2I	RGATCY	1 cut(s)	244
BstYI	RGATCY	1 cut(s)	244
Bsu15I	ATCGAT	1 cut(s)	27
BsuRI	GGCC	1 cut(s)	329
BsuTUI	ATCGAT	1 cut(s)	27
BtgI	CCRYGG	2 cut(s)	207, 271
Cac8I	GCNNGC	2 cut(s)	204, 294
CfoI	GCGC	1 cut(s)	357
Cfr13I	GGNCC	1 cut(s)	211
ClaI	ATCGAT	1 cut(s)	27
CseI	GACGC	1 cut(s)	182
Csp6I	GTAC	3 cut(s)	103, 115, 232
CviAII	CATG	3 cut(s)	208, 220, 289
CviJI	RGCY	5 cut(s)	68, 149, 276, 329, 338
CviKI_1	RGCY	5 cut(s)	68, 149, 276, 329, 338
CviQI	GTAC	3 cut(s)	103, 115, 232
DdeI	CTNAG	1 cut(s)	98
DpnI	GATC	4 cut(s)	30, 111, 120, 246
DpnII	GATC	4 cut(s)	28, 109, 118, 244
Ecl136II	GAGCTC	1 cut(s)	338
Eco130I	CCWWGG	3 cut(s)	207, 240, 330
Eco147I	AGGCCT	1 cut(s)	329
Eco24I	GRGCYC	1 cut(s)	340
Eco47I	GGWCC	1 cut(s)	211
Eco53kI	GAGCTC	1 cut(s)	338
Eco57I	CTGAAG	2 cut(s)	233, 266
EcoICRI	GAGCTC	1 cut(s)	338
EcoNI	CCTNNNNNAGG	1 cut(s)	239
EcoRII	CCWGG	1 cut(s)	164
EcoT14I	CCWWGG	3 cut(s)	207, 240, 330
EcoT22I	ATGCAT	1 cut(s)	60
EcoT38I	GRGCYC	1 cut(s)	340
ErhI	CCWWGG	3 cut(s)	207, 240, 330
Esp3I	CGTCTC	1 cut(s)	200
FaeI	CATG	3 cut(s)	211, 223, 292
FalI	AAGNNNNNCTT	2 cut(s)	26, 58
FatI	CATG	3 cut(s)	207, 219, 288
FauNDI	CATATG	1 cut(s)	60
FriOI	GRGCYC	1 cut(s)	340
GlaI	GCGC	1 cut(s)	356
HaeIII	GGCC	1 cut(s)	329
HgaI	GACGC	1 cut(s)	182
HhaI	GCGC	1 cut(s)	357
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	3 cut(s)	211, 223, 292
Hin6I	GCGC	1 cut(s)	355
HinP1I	GCGC	1 cut(s)	355
Hpy188I	TCNGA	2 cut(s)	15, 99
Hpy188III	TCNNGA	1 cut(s)	284
Hpy99I	CGWCG	1 cut(s)	10
HpyAV	CCTTC	1 cut(s)	92
HpyCH4III	ACNGT	2 cut(s)	95, 131
HpyCH4V	TGCA	2 cut(s)	58, 259
HpyF10VI	GCNNNNNNNGC	2 cut(s)	199, 335
HpyF3I	CTNAG	1 cut(s)	98
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	3 cut(s)	211, 223, 292
HspAI	GCGC	1 cut(s)	355
Kzo9I	GATC	4 cut(s)	28, 109, 118, 244
LmnI	GCTCC	1 cut(s)	335
LpnPI	CCDG	6 cut(s)	151, 178, 203, 236, 269, 365
LweI	GCATC	1 cut(s)	169
MaeIII	GTNAC	1 cut(s)	185
MalI	GATC	4 cut(s)	30, 111, 120, 246
MboI	GATC	4 cut(s)	28, 109, 118, 244
MboII	GAAGA	3 cut(s)	49, 239, 272
MflI	RGATCY	1 cut(s)	244
MhlI	GDGCHC	1 cut(s)	340
MnlI	CCTC	8 cut(s)	56, 93, 139, 163, 224, 245, 300, 319
Mph1103I	ATGCAT	1 cut(s)	60
MroXI	GAANNNNTTC	2 cut(s)	20, 41
MspR9I	CCNGG	1 cut(s)	166
Mva1269I	GAATGC	1 cut(s)	20
MvaI	CCWGG	1 cut(s)	166
MwoI	GCNNNNNNNGC	2 cut(s)	199, 335
NcoI	CCATGG	1 cut(s)	207
NdeI	CATATG	1 cut(s)	60
NdeII	GATC	4 cut(s)	28, 109, 118, 244
NlaIII	CATG	3 cut(s)	211, 223, 292
NsiI	ATGCAT	1 cut(s)	60
NspI	RCATGY	1 cut(s)	292
PasI	CCCWGGG	1 cut(s)	165
PceI	AGGCCT	1 cut(s)	329
PcsI	WCGNNNNNNNCGW	1 cut(s)	190
PctI	GAATGC	1 cut(s)	20
PdmI	GAANNNNTTC	2 cut(s)	20, 41
PflMI	CCANNNNNTGG	1 cut(s)	272
Psp124BI	GAGCTC	1 cut(s)	340
Psp6I	CCWGG	1 cut(s)	164
PspGI	CCWGG	1 cut(s)	164
PspPI	GGNCC	1 cut(s)	211
PsuI	RGATCY	1 cut(s)	244
RsaI	GTAC	3 cut(s)	104, 116, 233
RsaNI	GTAC	3 cut(s)	103, 115, 232
SacI	GAGCTC	1 cut(s)	340
Sau3AI	GATC	4 cut(s)	28, 109, 118, 244
Sau96I	GGNCC	1 cut(s)	211
ScrFI	CCNGG	1 cut(s)	166
SduI	GDGCHC	1 cut(s)	340
SetI	ASST	5 cut(s)	104, 174, 216, 237, 340
SfaNI	GCATC	1 cut(s)	169
SinI	GGWCC	1 cut(s)	211
SmlI	CTYRAG	1 cut(s)	197
SmoI	CTYRAG	1 cut(s)	197
SseBI	AGGCCT	1 cut(s)	329
SsiI	CCGC	1 cut(s)	254
SstI	GAGCTC	1 cut(s)	340
StuI	AGGCCT	1 cut(s)	329
StyD4I	CCNGG	1 cut(s)	164
StyI	CCWWGG	3 cut(s)	207, 240, 330
TaaI	ACNGT	2 cut(s)	95, 131
TaqI	TCGA	1 cut(s)	27
TspDTI	ATGAA	4 cut(s)	13, 77, 167, 236
TspGWI	ACGGA	1 cut(s)	260
Van91I	CCANNNNNTGG	1 cut(s)	272
VpaK11BI	GGWCC	1 cut(s)	211
XagI	CCTNNNNNAGG	1 cut(s)	239
XceI	RCATGY	1 cut(s)	292
XmnI	GAANNNNTTC	2 cut(s)	20, 41
Zsp2I	ATGCAT	1 cut(s)	60

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.