AT4G32570

tify domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0008601
Physical Location & Seq
Reverse (-)
15716232 .. 15718867
2636 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G32570.1

Sequence Viewer

Length: 1086 bp
ATGATGGTGAACCACAACAATGGCCAGCGACCCACTGATATTGATTCTCGTCTCCGACAGACAGAACAAGATAAGCTCTTGTTCCATGACTTTTTAGGCTCCAAGAATCCTACTTTAGCATCCACTTCCATGGCTGACCATAGGCTACCACCGGATAATAAGGCGGCTAAAGCGGCGATGACTCCTTCCACGGCTTCTGCTTCCTCCGCCGGTGGACTCGGCGGTCTCTCCTCAACCTCCGATCTCGTCGAAAGACACAGCGGCGGTGGGAATCATCTTGATGGGATACAATTGTTTGGACCAAGAAGTGATGTTTCTGGCTCAATCATGAGCAATCGGTTTTCAGGAAATAAGAGAAGTAACTCTGATTCTCACTTCACGACTCAGGAGCACCCAGAGACTCTGCATTGGTCCAAGTTGCTTAGAAACGGACCTGGAAGCTTCTCCATGAATGTGAATCCTTTGGCAAACCAGCCTCCACGCGGAGGAGGACAGATCAGTCATTTGCTTCATCAGCTGTCTACTAGCAGGTTCAAAGATGAGAACGTAGGCCCATCAGTTATTGCTCAGACAGCTGCTGATGAAGGTTCACGAACAGGGATGAAAGGTCCCGGTATCTTGAGTTCTTTTACAATGCCAAACTCAAGCAAGCTCGAAAGTTTTGCCCCTTCAAATACCGGAAATCGGAAAGACTTGGCGTCGAGTACTAAGCAAATGACCATCTTCTATGGCGGTCAAGCTCATGTCTTTGATGACGTTCACCCAAACAAGGCGGATGTGATAATGGCCTTGGCAGGATCAAGCGGAGGCTCATGGTCTACGGGTTTGTCTCATAAACCGAAGTCGAAGAACAACACAAGTGACGGTCCATACAAGCTAGGCCAAATGTATGAAGGAGGCAGCTCTAAGGAAACACCACAAATGCCCCCGGAATTTCGTGCAAGGCCGAGTCATCAACCTACCTCCAGTGCCTGTCACCGGATCTTTACACAACCAGGTAGAGAGCATCAAGGAAGCATCATCTCAAGGGGACGAGATATCAGAGATCCGGTTCACAGATCAGATCCTGAAAAAGAAGCCACATGA

Protein Analysis

361

Amino Acids

38.73

Weight (kDa)

9.4

Isoelectric Point (pI)

42.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
tify PF06200 234 - 266 5.4e-15 tify domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 222, 498
Acc36I ACCTGC 1 cut(s) 519
AccI GTMKAC 2 cut(s) 521, 818
AccII CGCG 1 cut(s) 483
AclWI GGATC 4 cut(s) 805, 989, 1040, 1058
AcoI YGGCCR 1 cut(s) 22
AcsI RAATTY 1 cut(s) 932
AcyI GRCGYC 1 cut(s) 698
AfaI GTAC 1 cut(s) 706
AfiI CCNNNNNNNGG 5 cut(s) 482, 485, 684, 769, 978
AgsI TTSAA 2 cut(s) 535, 672
AhdI GACNNNNNGTC 1 cut(s) 697
AjnI CCWGG 2 cut(s) 433, 994
AluBI AGCT 8 cut(s) 76, 441, 517, 575, 652, 740, 877, 903
AluI AGCT 8 cut(s) 76, 441, 517, 575, 652, 740, 877, 903
Alw21I GWGCWC 1 cut(s) 393
Alw26I GTCTC 4 cut(s) 56, 230, 392, 834
AlwI GGATC 4 cut(s) 805, 989, 1040, 1058
AlwNI CAGNNNCTG 3 cut(s) 578, 972, 1067
AoxI GGCC 5 cut(s) 22, 550, 786, 880, 944
ApeKI GCWGC 2 cut(s) 575, 900
ApoI RAATTY 1 cut(s) 932
AspS9I GGNCC 6 cut(s) 299, 411, 431, 551, 608, 866
AsuC2I CCSGG 2 cut(s) 612, 929
AsuHPI GGTGA 3 cut(s) 19, 752, 968
AvaII GGWCC 5 cut(s) 299, 411, 431, 608, 866
BaeI ACNNNNGTAYC 2 cut(s) 278, 311
BalI TGGCCA 1 cut(s) 24
Bbv12I GWGCWC 1 cut(s) 393
BbvI GCAGC 2 cut(s) 562, 912
BccI CCATC 3 cut(s) 275, 562, 728
BceAI ACGGC 1 cut(s) 207
BcgI CGANNNNNNTGC 2 cut(s) 644, 678
BciT130I CCWGG 2 cut(s) 435, 996
BciVI GTATCC 1 cut(s) 279
BcnI CCSGG 2 cut(s) 612, 929
BcoDI GTCTC 4 cut(s) 56, 230, 392, 834
BfaI CTAG 2 cut(s) 525, 878
BfuAI ACCTGC 1 cut(s) 519
BfuI GTATCC 1 cut(s) 279
BisI GCNGC 5 cut(s) 165, 174, 262, 576, 901
BlsI GCNGC 5 cut(s) 166, 175, 263, 577, 902
BmcAI AGTACT 1 cut(s) 706
Bme1390I CCNGG 4 cut(s) 435, 612, 929, 996
Bme18I GGWCC 5 cut(s) 299, 411, 431, 608, 866
BmeRI GACNNNNNGTC 1 cut(s) 697
BmgT120I GGNCC 6 cut(s) 299, 411, 431, 551, 608, 866
BmiI GGNNCC 2 cut(s) 100, 610
BmrFI CCNGG 4 cut(s) 435, 612, 929, 996
BmsI GCATC 3 cut(s) 128, 1015, 1026
BpmI CTGGAG 1 cut(s) 949
BpuEI CTTGAG 3 cut(s) 628, 640, 1009
BpuMI CCSGG 2 cut(s) 612, 929
BsaHI GRCGYC 1 cut(s) 698
BsaI GGTCTC 1 cut(s) 230
BsaJI CCNNGG 4 cut(s) 129, 189, 789, 927
BsaWI WCCGGW 4 cut(s) 151, 677, 978, 1048
Bsc4I CCNNNNNNNGG 5 cut(s) 482, 485, 684, 769, 978
Bse118I RCCGGY 1 cut(s) 209
Bse1I ACTGG 1 cut(s) 966
BseBI CCWGG 2 cut(s) 435, 996
BseDI CCNNGG 4 cut(s) 129, 189, 789, 927
BseGI GGATG 3 cut(s) 119, 606, 781
BseLI CCNNNNNNNGG 5 cut(s) 482, 485, 684, 769, 978
BseMII CTCAG 2 cut(s) 398, 581
BseNI ACTGG 1 cut(s) 966
BseRI GAGGAG 2 cut(s) 220, 501
BseXI GCAGC 2 cut(s) 562, 912
Bsh1236I CGCG 1 cut(s) 483
BshFI GGCC 5 cut(s) 24, 552, 788, 882, 946
BsiHKAI GWGCWC 1 cut(s) 393
BsiSI CCGG 7 cut(s) 152, 210, 612, 678, 929, 979, 1049
BslFI GGGAC 2 cut(s) 594, 1044
BslI CCNNNNNNNGG 5 cut(s) 482, 485, 684, 769, 978
BsmAI GTCTC 4 cut(s) 56, 230, 392, 834
BsmBI CGTCTC 1 cut(s) 56
BsmFI GGGAC 2 cut(s) 594, 1044
BsnI GGCC 5 cut(s) 24, 552, 788, 882, 946
Bso31I GGTCTC 1 cut(s) 230
Bsp1286I GDGCHC 1 cut(s) 393
Bsp143I GATC 7 cut(s) 241, 495, 797, 981, 1045, 1058, 1063
Bsp19I CCATGG 1 cut(s) 129
BspANI GGCC 5 cut(s) 24, 552, 788, 882, 946
BspCNI CTCAG 2 cut(s) 397, 580
BspFNI CGCG 1 cut(s) 483
BspHI TCATGA 1 cut(s) 327
BspLI GGNNCC 2 cut(s) 100, 610
BspMI ACCTGC 1 cut(s) 519
BspPI GGATC 4 cut(s) 805, 989, 1040, 1058
BspTNI GGTCTC 1 cut(s) 230
BsrFI RCCGGY 1 cut(s) 209
BsrI ACTGG 1 cut(s) 966
BssAI RCCGGY 1 cut(s) 209
BssECI CCNNGG 4 cut(s) 129, 189, 789, 927
BssMI GATC 7 cut(s) 241, 495, 797, 981, 1045, 1058, 1063
BssNI GRCGYC 1 cut(s) 698
BssT1I CCWWGG 2 cut(s) 129, 789
Bst2UI CCWGG 2 cut(s) 435, 996
Bst4CI ACNGT 1 cut(s) 866
BstACI GRCGYC 1 cut(s) 698
BstC8I GCNNGC 2 cut(s) 26, 650
BstDEI CTNAG 5 cut(s) 384, 422, 567, 708, 906
BstDSI CCRYGG 2 cut(s) 129, 189
BstF5I GGATG 3 cut(s) 119, 606, 781
BstFNI CGCG 1 cut(s) 483
BstKTI GATC 7 cut(s) 244, 498, 800, 984, 1048, 1061, 1066
BstMAI GTCTC 4 cut(s) 56, 230, 392, 834
BstMBI GATC 7 cut(s) 241, 495, 797, 981, 1045, 1058, 1063
BstMWI GCNNNNNNNGC 5 cut(s) 170, 173, 206, 514, 572
BstNI CCWGG 2 cut(s) 435, 996
BstSCI CCNGG 4 cut(s) 433, 610, 927, 994
BstUI CGCG 1 cut(s) 483
BstV1I GCAGC 2 cut(s) 562, 912
BstX2I RGATCY 3 cut(s) 981, 1045, 1063
BstXI CCANNNNNNTGG 2 cut(s) 20, 130
BstYI RGATCY 3 cut(s) 981, 1045, 1063
BsuI GTATCC 1 cut(s) 279
BsuRI GGCC 5 cut(s) 24, 552, 788, 882, 946
BtgI CCRYGG 2 cut(s) 129, 189
BtgZI GCGATG 1 cut(s) 191
BtsCI GGATG 3 cut(s) 119, 606, 781
BtsIMutI CAGTG 2 cut(s) 33, 973
BveI ACCTGC 1 cut(s) 519
Cac8I GCNNGC 2 cut(s) 26, 650
CaiI CAGNNNCTG 3 cut(s) 578, 972, 1067
CciI TCATGA 1 cut(s) 327
Cfr10I RCCGGY 1 cut(s) 209
Cfr13I GGNCC 6 cut(s) 299, 411, 431, 551, 608, 866
CseI GACGC 1 cut(s) 687
CsiI ACCWGGT 1 cut(s) 994
Csp6I GTAC 1 cut(s) 705
CspCI CAANNNNNGTGG 2 cut(s) 22, 57
CviAII CATG 7 cut(s) 86, 130, 328, 448, 743, 813, 1083
CviQI GTAC 1 cut(s) 705
DdeI CTNAG 5 cut(s) 384, 422, 567, 708, 906
DpnI GATC 7 cut(s) 243, 497, 799, 983, 1047, 1060, 1065
DpnII GATC 7 cut(s) 241, 495, 797, 981, 1045, 1058, 1063
DrdI GACNNNNNNGTC 2 cut(s) 222, 498
DriI GACNNNNNGTC 1 cut(s) 697
DseDI GACNNNNNNGTC 2 cut(s) 222, 498
EaeI YGGCCR 1 cut(s) 22
Eam1105I GACNNNNNGTC 1 cut(s) 697
EciI GGCGGA 2 cut(s) 196, 788
Eco130I CCWWGG 2 cut(s) 129, 789
Eco31I GGTCTC 1 cut(s) 230
Eco32I GATATC 1 cut(s) 1039
Eco47I GGWCC 5 cut(s) 299, 411, 431, 608, 866
EcoO109I RGGNCCY 1 cut(s) 608
EcoRII CCWGG 2 cut(s) 433, 994
EcoRV GATATC 1 cut(s) 1039
EcoT14I CCWWGG 2 cut(s) 129, 789
ErhI CCWWGG 2 cut(s) 129, 789
Esp3I CGTCTC 1 cut(s) 56
FaeI CATG 7 cut(s) 89, 133, 331, 451, 746, 816, 1086
FaqI GGGAC 2 cut(s) 594, 1044
FatI CATG 7 cut(s) 85, 129, 327, 447, 742, 812, 1082
FblI GTMKAC 2 cut(s) 521, 818
Fnu4HI GCNGC 5 cut(s) 165, 174, 262, 576, 901
FokI GGATG 3 cut(s) 106, 613, 788
Fsp4HI GCNGC 5 cut(s) 165, 174, 262, 576, 901
FspBI CTAG 2 cut(s) 525, 878
GluI GCNGC 5 cut(s) 165, 174, 262, 576, 901
GsuI CTGGAG 1 cut(s) 949
HaeIII GGCC 5 cut(s) 24, 552, 788, 882, 946
HapII CCGG 7 cut(s) 152, 210, 612, 678, 929, 979, 1049
HgaI GACGC 1 cut(s) 687
Hin1I GRCGYC 1 cut(s) 698
Hin1II CATG 7 cut(s) 89, 133, 331, 451, 746, 816, 1086
HindIII AAGCTT 1 cut(s) 439
HpaII CCGG 7 cut(s) 152, 210, 612, 678, 929, 979, 1049
HphI GGTGA 3 cut(s) 19, 752, 968
Hpy166II GTNNAC 7 cut(s) 10, 215, 522, 590, 760, 819, 1054
Hpy188I TCNGA 7 cut(s) 56, 241, 367, 570, 687, 1043, 1063
Hpy188III TCNNGA 8 cut(s) 278, 328, 345, 379, 386, 591, 619, 1067
Hpy8I GTNNAC 7 cut(s) 10, 215, 522, 590, 760, 819, 1054
Hpy99I CGWCG 2 cut(s) 251, 703
HpyAV CCTTC 4 cut(s) 195, 578, 678, 887
HpyCH4III ACNGT 1 cut(s) 866
HpyCH4IV ACGT 2 cut(s) 546, 756
HpyCH4V TGCA 2 cut(s) 406, 941
HpyF10VI GCNNNNNNNGC 5 cut(s) 170, 173, 206, 514, 572
HpyF3I CTNAG 5 cut(s) 384, 422, 567, 708, 906
HpySE526I ACGT 2 cut(s) 546, 756
Hsp92I GRCGYC 1 cut(s) 698
Hsp92II CATG 7 cut(s) 89, 133, 331, 451, 746, 816, 1086
Kzo9I GATC 7 cut(s) 241, 495, 797, 981, 1045, 1058, 1063
LmnI GCTCC 2 cut(s) 104, 388
Lsp1109I GCAGC 2 cut(s) 562, 912
LweI GCATC 3 cut(s) 128, 1015, 1026
MabI ACCWGGT 1 cut(s) 994
MaeI CTAG 2 cut(s) 525, 878
MaeII ACGT 2 cut(s) 546, 756
MaeIII GTNAC 3 cut(s) 359, 860, 974
MalI GATC 7 cut(s) 243, 497, 799, 983, 1047, 1060, 1065
MboI GATC 7 cut(s) 241, 495, 797, 981, 1045, 1058, 1063
MboII GAAGA 2 cut(s) 715, 859
MfeI CAATTG 1 cut(s) 290
MflI RGATCY 3 cut(s) 981, 1045, 1063
MhlI GDGCHC 1 cut(s) 393
MlsI TGGCCA 1 cut(s) 24
MluCI AATT 2 cut(s) 290, 932
MluNI TGGCCA 1 cut(s) 24
MlyI GAGTC 5 cut(s) 175, 210, 376, 394, 958
MmeI TCCRAC 1 cut(s) 79
MnlI CCTC 9 cut(s) 214, 241, 247, 479, 482, 486, 800, 890, 973
Mox20I TGGCCA 1 cut(s) 24
MscI TGGCCA 1 cut(s) 24
MslI CAYNNNNRTG 4 cut(s) 18, 128, 279, 452
Msp20I TGGCCA 1 cut(s) 24
MspA1I CMGCKG 3 cut(s) 261, 517, 575
MspI CCGG 7 cut(s) 152, 210, 612, 678, 929, 979, 1049
MspR9I CCNGG 4 cut(s) 435, 612, 929, 996
MunI CAATTG 1 cut(s) 290
MvaI CCWGG 2 cut(s) 435, 996
MvnI CGCG 1 cut(s) 483
MwoI GCNNNNNNNGC 5 cut(s) 170, 173, 206, 514, 572
NciI CCSGG 2 cut(s) 612, 929
NcoI CCATGG 1 cut(s) 129
NdeII GATC 7 cut(s) 241, 495, 797, 981, 1045, 1058, 1063
NlaIII CATG 7 cut(s) 89, 133, 331, 451, 746, 816, 1086
NlaIV GGNNCC 2 cut(s) 100, 610
NmeAIII GCCGAG 2 cut(s) 198, 972
NmuCI GTSAC 2 cut(s) 860, 974
PagI TCATGA 1 cut(s) 327
PfeI GAWTC 5 cut(s) 44, 106, 271, 368, 457
PkrI GCNGC 5 cut(s) 166, 175, 263, 577, 902
PleI GAGTC 5 cut(s) 175, 210, 376, 394, 957
PpsI GAGTC 5 cut(s) 175, 210, 376, 394, 957
PpuMI RGGWCCY 1 cut(s) 608
Psp5II RGGWCCY 1 cut(s) 608
Psp6I CCWGG 2 cut(s) 433, 994
PspGI CCWGG 2 cut(s) 433, 994
PspN4I GGNNCC 2 cut(s) 100, 610
PspPI GGNCC 6 cut(s) 299, 411, 431, 551, 608, 866
PspPPI RGGWCCY 1 cut(s) 608
PsrI GAACNNNNNNTAC 2 cut(s) 607, 639
PstNI CAGNNNCTG 3 cut(s) 578, 972, 1067
PsuI RGATCY 3 cut(s) 981, 1045, 1063
PvuII CAGCTG 2 cut(s) 517, 575
RsaI GTAC 1 cut(s) 706
RsaNI GTAC 1 cut(s) 705
RseI CAYNNNNRTG 4 cut(s) 18, 128, 279, 452
SatI GCNGC 5 cut(s) 165, 174, 262, 576, 901
Sau3AI GATC 7 cut(s) 241, 495, 797, 981, 1045, 1058, 1063
Sau96I GGNCC 6 cut(s) 299, 411, 431, 551, 608, 866
ScaI AGTACT 1 cut(s) 706
SchI GAGTC 5 cut(s) 175, 210, 376, 394, 958
ScrFI CCNGG 4 cut(s) 435, 612, 929, 996
SduI GDGCHC 1 cut(s) 393
SexAI ACCWGGT 1 cut(s) 994
SfaNI GCATC 3 cut(s) 128, 1015, 1026
SgrAI CRCCGGYG 1 cut(s) 209
SinI GGWCC 5 cut(s) 299, 411, 431, 608, 866
SmiMI CAYNNNNRTG 4 cut(s) 18, 128, 279, 452
SmlI CTYRAG 3 cut(s) 619, 643, 1024
SmoI CTYRAG 3 cut(s) 619, 643, 1024
Sse9I AATT 2 cut(s) 290, 932
SspMI CTAG 2 cut(s) 525, 878
StyD4I CCNGG 4 cut(s) 433, 610, 927, 994
StyI CCWWGG 2 cut(s) 129, 789
TaaI ACNGT 1 cut(s) 866
TaiI ACGT 2 cut(s) 549, 759
TaqI TCGA 4 cut(s) 249, 654, 701, 845
TasI AATT 2 cut(s) 290, 932
TatI WGTACW 1 cut(s) 704
TauI GCSGC 3 cut(s) 167, 176, 264
TfiI GAWTC 5 cut(s) 44, 106, 271, 368, 457
TscAI CASTG 2 cut(s) 40, 973
TseFI GTSAC 2 cut(s) 860, 974
TseI GCWGC 2 cut(s) 575, 900
Tsp45I GTSAC 2 cut(s) 860, 974
TspDTI ATGAA 5 cut(s) 464, 500, 597, 617, 906
TspGWI ACGGA 1 cut(s) 444
TspRI CASTG 2 cut(s) 40, 973
VpaK11BI GGWCC 5 cut(s) 299, 411, 431, 608, 866
XapI RAATTY 1 cut(s) 932
XmiI GTMKAC 2 cut(s) 521, 818
XspI CTAG 2 cut(s) 525, 878
ZrmI AGTACT 1 cut(s) 706
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.