AT4G33960

No description available

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
16277282 .. 16277896
615 bp
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UTR
Exon/CDS
Intron
AT4G33960.1

Sequence Viewer

Length: 204 bp
ATGGTGATAAAAAGGATAGAGCTGTGTATAGAGCTAATGAAGATAGGTATGGAGTTTGTAGTGGTGGTGGCTGAAGCCGTCCAGATTGTTATGCGGCAACACCTCAACCACCGTGCTCCACCTCCTCCGCCTGTCCTCCGCCAGGGTCTTCTCCCTTATACCGCTTCTTACCCTTCTCCATTCCTATTTGGATTTCTCCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

67

Amino Acids

7.6

Weight (kDa)

9.1

Isoelectric Point (pI)

67.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018304)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 94, 128, 139, 162
AcuI CTGAAG 1 cut(s) 93
AfiI CCNNNNNNNGG 1 cut(s) 142
AjnI CCWGG 1 cut(s) 141
AluBI AGCT 2 cut(s) 22, 34
AluI AGCT 2 cut(s) 22, 34
Alw21I GWGCWC 1 cut(s) 118
AsuHPI GGTGA 1 cut(s) 16
BbsI GAAGAC 1 cut(s) 140
Bbv12I GWGCWC 1 cut(s) 118
BceAI ACGGC 1 cut(s) 62
BciT130I CCWGG 1 cut(s) 143
BisI GCNGC 1 cut(s) 95
BlsI GCNGC 1 cut(s) 96
Bme1390I CCNGG 1 cut(s) 143
BmrFI CCNGG 1 cut(s) 143
BpiI GAAGAC 1 cut(s) 140
BsaJI CCNNGG 1 cut(s) 142
Bsc4I CCNNNNNNNGG 1 cut(s) 142
BseBI CCWGG 1 cut(s) 143
BseDI CCNNGG 1 cut(s) 142
BseLI CCNNNNNNNGG 1 cut(s) 142
BseRI GAGGAG 1 cut(s) 114
BsiHKAI GWGCWC 1 cut(s) 118
BslI CCNNNNNNNGG 1 cut(s) 142
Bsp1286I GDGCHC 1 cut(s) 118
BspACI CCGC 4 cut(s) 94, 128, 139, 162
BssECI CCNNGG 1 cut(s) 142
Bst2UI CCWGG 1 cut(s) 143
Bst4CI ACNGT 1 cut(s) 113
BstENI CCTNNNNNAGG 1 cut(s) 140
BstNI CCWGG 1 cut(s) 143
BstSCI CCNGG 1 cut(s) 141
BstV2I GAAGAC 1 cut(s) 140
CviJI RGCY 4 cut(s) 22, 34, 71, 77
CviKI_1 RGCY 4 cut(s) 22, 34, 71, 77
EciI GGCGGA 2 cut(s) 117, 128
Eco57I CTGAAG 1 cut(s) 93
EcoNI CCTNNNNNAGG 1 cut(s) 140
EcoRII CCWGG 1 cut(s) 141
FaiI YATR 4 cut(s) 29, 50, 92, 159
Fnu4HI GCNGC 1 cut(s) 95
Fsp4HI GCNGC 1 cut(s) 95
GluI GCNGC 1 cut(s) 95
HphI GGTGA 1 cut(s) 16
Hpy188III TCNNGA 1 cut(s) 82
HpyAV CCTTC 1 cut(s) 183
HpyCH4III ACNGT 1 cut(s) 113
LmnI GCTCC 1 cut(s) 121
LpnPI CCDG 4 cut(s) 95, 128, 144, 155
MboII GAAGA 2 cut(s) 52, 140
MhlI GDGCHC 1 cut(s) 118
MnlI CCTC 4 cut(s) 113, 132, 135, 146
MspR9I CCNGG 1 cut(s) 143
MvaI CCWGG 1 cut(s) 143
PkrI GCNGC 1 cut(s) 96
Psp6I CCWGG 1 cut(s) 141
PspGI CCWGG 1 cut(s) 141
SatI GCNGC 1 cut(s) 95
ScrFI CCNGG 1 cut(s) 143
SduI GDGCHC 1 cut(s) 118
SetI ASST 5 cut(s) 24, 36, 49, 105, 124
SgeI CNNG 5 cut(s) 94, 125, 143, 154, 155
SsiI CCGC 4 cut(s) 94, 128, 139, 162
StyD4I CCNGG 1 cut(s) 141
TaaI ACNGT 1 cut(s) 113
TauI GCSGC 1 cut(s) 97
TspDTI ATGAA 1 cut(s) 53
XagI CCTNNNNNAGG 1 cut(s) 140
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.