Rh6AG104400

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Forward (+)
15425184 .. 15425532
349 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG104400.1

Sequence Viewer

Length: 210 bp
ATGGTGATTCTGAGGTTGGACACGTGTGTGGAGCTACTGAAGCTGGCCATAGAGTTCGTCATTGTCGTAGCAGAAGCAGTAGAGATAGCTCTTCAGCAGAACTTCCCTCCAAATCTTACAAGTTCGTTTAAATTCTACTCAGTTGCTTATTCCTTTGGGCCAGAAGATATTTGTATTATTAGCTCTACTGGCACCATTGATGCTTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

69

Amino Acids

7.64

Weight (kDa)

4.12

Isoelectric Point (pI)

39.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0018304)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 191
AcoI YGGCCR 1 cut(s) 45
AcsI RAATTY 1 cut(s) 131
AcuI CTGAAG 2 cut(s) 59, 77
AcvI CACGTG 1 cut(s) 24
AflIII ACRYGT 2 cut(s) 21, 23
AleI CACNNNNGTG 1 cut(s) 26
AluBI AGCT 4 cut(s) 34, 43, 89, 183
AluI AGCT 4 cut(s) 34, 43, 89, 183
AoxI GGCC 2 cut(s) 45, 158
ApoI RAATTY 1 cut(s) 131
AspS9I GGNCC 1 cut(s) 158
AsuHPI GGTGA 1 cut(s) 16
BalI TGGCCA 1 cut(s) 47
BanI GGYRCC 1 cut(s) 191
BbrPI CACGTG 1 cut(s) 24
BmgT120I GGNCC 1 cut(s) 158
BmiI GGNNCC 1 cut(s) 193
BmsI GCATC 1 cut(s) 190
BsaAI YACGTR 1 cut(s) 24
Bse1I ACTGG 1 cut(s) 193
BseMII CTCAG 1 cut(s) 153
BseNI ACTGG 1 cut(s) 193
BshFI GGCC 2 cut(s) 47, 160
BshNI GGYRCC 1 cut(s) 191
BsnI GGCC 2 cut(s) 47, 160
BspANI GGCC 2 cut(s) 47, 160
BspCNI CTCAG 1 cut(s) 152
BspLI GGNNCC 1 cut(s) 193
BspQI GCTCTTC 1 cut(s) 96
BspT107I GGYRCC 1 cut(s) 191
BsrI ACTGG 1 cut(s) 193
Bst6I CTCTTC 1 cut(s) 96
BstBAI YACGTR 1 cut(s) 24
BstC8I GCNNGC 1 cut(s) 45
BstDEI CTNAG 2 cut(s) 11, 139
BstMWI GCNNNNNNNGC 2 cut(s) 40, 189
BsuRI GGCC 2 cut(s) 47, 160
Cac8I GCNNGC 1 cut(s) 45
Cfr13I GGNCC 1 cut(s) 158
CviJI RGCY 6 cut(s) 34, 43, 47, 89, 160, 183
CviKI_1 RGCY 6 cut(s) 34, 43, 47, 89, 160, 183
DdeI CTNAG 2 cut(s) 11, 139
DraI TTTAAA 1 cut(s) 130
EaeI YGGCCR 1 cut(s) 45
Eam1104I CTCTTC 1 cut(s) 96
EarI CTCTTC 1 cut(s) 96
Eco57I CTGAAG 2 cut(s) 59, 77
Eco72I CACGTG 1 cut(s) 24
FaiI YATR 1 cut(s) 50
HaeIII GGCC 2 cut(s) 47, 160
HinfI GANTC 1 cut(s) 7
HphI GGTGA 1 cut(s) 16
Hpy188I TCNGA 1 cut(s) 12
HpyCH4IV ACGT 1 cut(s) 23
HpyF10VI GCNNNNNNNGC 2 cut(s) 40, 189
HpyF3I CTNAG 2 cut(s) 11, 139
HpySE526I ACGT 1 cut(s) 23
LguI GCTCTTC 1 cut(s) 96
LmnI GCTCC 1 cut(s) 31
LpnPI CCDG 3 cut(s) 29, 174, 174
LweI GCATC 1 cut(s) 190
MaeII ACGT 1 cut(s) 23
MboII GAAGA 2 cut(s) 83, 176
MlsI TGGCCA 1 cut(s) 47
MluCI AATT 1 cut(s) 131
MluNI TGGCCA 1 cut(s) 47
MnlI CCTC 2 cut(s) 6, 117
Mox20I TGGCCA 1 cut(s) 47
MscI TGGCCA 1 cut(s) 47
MseI TTAA 1 cut(s) 129
MslI CAYNNNNRTG 1 cut(s) 26
Msp20I TGGCCA 1 cut(s) 47
MwoI GCNNNNNNNGC 2 cut(s) 40, 189
NlaIV GGNNCC 1 cut(s) 193
OliI CACNNNNGTG 1 cut(s) 26
PciSI GCTCTTC 1 cut(s) 96
PcsI WCGNNNNNNNCGW 1 cut(s) 63
PfeI GAWTC 1 cut(s) 7
PmaCI CACGTG 1 cut(s) 24
PmlI CACGTG 1 cut(s) 24
Ppu21I YACGTR 1 cut(s) 24
PspCI CACGTG 1 cut(s) 24
PspN4I GGNNCC 1 cut(s) 193
PspPI GGNCC 1 cut(s) 158
RseI CAYNNNNRTG 1 cut(s) 26
SapI GCTCTTC 1 cut(s) 96
SaqAI TTAA 1 cut(s) 129
Sau96I GGNCC 1 cut(s) 158
SetI ASST 6 cut(s) 17, 26, 36, 45, 91, 185
SfaNI GCATC 1 cut(s) 190
SgeI CNNG 6 cut(s) 34, 36, 56, 132, 173, 201
SmiMI CAYNNNNRTG 1 cut(s) 26
Sse9I AATT 1 cut(s) 131
TaiI ACGT 1 cut(s) 26
TasI AATT 1 cut(s) 131
TfiI GAWTC 1 cut(s) 7
Tru1I TTAA 1 cut(s) 129
Tru9I TTAA 1 cut(s) 129
XapI RAATTY 1 cut(s) 131
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.