Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0019126

Physical Location & Seq

Genomic Coordinates Forward (+)

16952406 .. 16952947

Gene Structure 542 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G35783.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 189 bp

ATGGGGCAATGCTCATCGGCGACAAAGATGAGGAGAAAGAGGAAAAGGGAAGAAGAATGTTGCAGAGAATCAATGGAGAGGAGGAATAAAGGATGTTTAGCCATGGTGAAGGAGAGACGTTCTAGGTTTTATATAGCTAGAAGATGTATTCTTATGTTGCTTTGTTGGCACAAATACGCCAATTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DVL

Protein Analysis

62

Amino Acids

7.58

Weight (kDa)

10.25

Isoelectric Point (pI)

124.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DVL	PF08137	37 - 55	6.5e-10	DVL family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0019126)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18518 AT4G35783
malus_domestica	MD02G1122600.v1.1
prunus_persica	Prupe.7G175900_v2.0.a1
pyrus_communis	pycom02g09560
rosa_chinensis	RchiOBHm_Chr2g0098221
rosa_roxburghii	Rroxscaffold_2G00144150
rosa_wichuraiana	Rw2G009280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AluBI	AGCT	1 cut(s)	137
AluI	AGCT	1 cut(s)	137
Alw26I	GTCTC	1 cut(s)	109
AsuHPI	GGTGA	1 cut(s)	118
BcoDI	GTCTC	1 cut(s)	109
BfaI	CTAG	2 cut(s)	123, 138
BsaJI	CCNNGG	1 cut(s)	102
Bse3DI	GCAATG	1 cut(s)	14
BseDI	CCNNGG	1 cut(s)	102
BseGI	GGATG	1 cut(s)	98
BseMI	GCAATG	1 cut(s)	14
BseRI	GAGGAG	2 cut(s)	46, 94
BsmAI	GTCTC	1 cut(s)	109
BsmBI	CGTCTC	1 cut(s)	109
Bsp19I	CCATGG	1 cut(s)	102
BsrDI	GCAATG	1 cut(s)	14
BssECI	CCNNGG	1 cut(s)	102
BssT1I	CCWWGG	1 cut(s)	102
BstDSI	CCRYGG	1 cut(s)	102
BstF5I	GGATG	1 cut(s)	98
BstMAI	GTCTC	1 cut(s)	109
BstMWI	GCNNNNNNNGC	1 cut(s)	166
BtgI	CCRYGG	1 cut(s)	102
BtsCI	GGATG	1 cut(s)	98
CviAII	CATG	1 cut(s)	103
CviJI	RGCY	2 cut(s)	101, 137
CviKI_1	RGCY	2 cut(s)	101, 137
Eco130I	CCWWGG	1 cut(s)	102
EcoT14I	CCWWGG	1 cut(s)	102
ErhI	CCWWGG	1 cut(s)	102
Esp3I	CGTCTC	1 cut(s)	109
FaeI	CATG	1 cut(s)	106
FaiI	YATR	4 cut(s)	104, 132, 134, 155
FatI	CATG	1 cut(s)	102
FokI	GGATG	1 cut(s)	105
FspBI	CTAG	2 cut(s)	123, 138
Hin1II	CATG	1 cut(s)	106
HinfI	GANTC	1 cut(s)	68
HphI	GGTGA	1 cut(s)	118
Hpy188III	TCNNGA	1 cut(s)	186
HpyAV	CCTTC	1 cut(s)	103
HpyCH4IV	ACGT	1 cut(s)	118
HpyCH4V	TGCA	1 cut(s)	63
HpyF10VI	GCNNNNNNNGC	1 cut(s)	166
HpySE526I	ACGT	1 cut(s)	118
Hsp92II	CATG	1 cut(s)	106
MaeI	CTAG	2 cut(s)	123, 138
MaeII	ACGT	1 cut(s)	118
MboII	GAAGA	3 cut(s)	62, 65, 153
MluCI	AATT	1 cut(s)	181
MnlI	CCTC	4 cut(s)	24, 33, 72, 75
MwoI	GCNNNNNNNGC	1 cut(s)	166
NcoI	CCATGG	1 cut(s)	102
NlaIII	CATG	1 cut(s)	106
PfeI	GAWTC	1 cut(s)	68
SetI	ASST	3 cut(s)	121, 128, 139
SgeI	CNNG	3 cut(s)	115, 135, 150
Sse9I	AATT	1 cut(s)	181
SspMI	CTAG	2 cut(s)	123, 138
StyI	CCWWGG	1 cut(s)	102
TaiI	ACGT	1 cut(s)	121
TasI	AATT	1 cut(s)	181
TfiI	GAWTC	1 cut(s)	68
XspI	CTAG	2 cut(s)	123, 138

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.