AT5G01240

Auxin transporter-like protein 1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0001953
Physical Location & Seq
Forward (+)
97536 .. 101835
4300 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G01240.2

Sequence Viewer

Length: 1467 bp
ATGTCGGGTGAGAAACAAGCGGAGGAGTCAATAGTAGTCTCCGGGGAGGATGAGGTGGCCGGTAGAAAAGTGGAAGATTCAGCGGCGGAGGAGGATATTGACGGCAACGGGGGCAATGGATTTAGTATGAAGAGCTTCCTCTGGCATGGCGGGTCCGCTTGGGACGCCTGGTTTAGCTGTGCATCAAATCAAGTGGCACAAGTGCTGTTGACGCTGCCGTATTCGTTCTCGCAGTTGGGAATGTTATCAGGAATATTGCTTCAAATATTCTATGGGTTAATGGGATCTTGGACTGCTTATCTCATCAGTGTTCTTTACGTCGAGTATCGTGCCCGTATGGAGAAACAAGAAGCCAAATCCTTCAAAAACCACGTTATTCAATGGTTTGAAGTGCTTGATGGGCTGCTGGGTCCGTACTGGAAAGCAGCGGGGCTCGCATTTAATTGCACCTTCTTGTTATTCGGATCAGTCATCCAGCTCATTGCTTGTGCTAGCAATATATATTACATAAACGATAGGTTAGACAAGAGGACATGGACTTATATATTTGGGGCTTGCTGTGCCACGACCGTTTTCATACCATCTTTCCACAATTACCGTATTTGGTCTTTCCTCGGCCTTGGCATGACCACCTACACCGCTTGGTACCTCACCATCGCCTCTTTTCTCCATGGTCAGGCGGAGGGTGTGACACATTCCGGTCCAACCAAGCTTGTGTTGTACTTTACCGGAGCCACCAACATCCTCTATACCTTCGGTGGACACGCTGTGACCGTGGAAATAATGCATGCGATGTGGAAACCAAGGAAGTTTAAGAGCATCTACTTGATGGCAACTCTGTACGTCTTCACATTAACGCTTCCGTCAGCCTCCGCCGTCTACTGGGCTTTCGGCGACCAACTTCTCAACCACTCAAACGCTTTCTCTCTCCTCCCTAAAACGCGTTTCCGTGACACCGCCGTTATCCTCATGCTCATCCATCAGTTTATAACGTTCGGGTTTGCGTGTACACCATTGTACTTCGTATGGGAAAAAGCGATCGGAATGCACCACACAAAGAGCTTATGTCTAAGAGCGCTGGTGAGGCTACCGGTGGTGGTTCCGATATGGTTTTTGGCAATCATCTTTCCCTTTTTCGGGCCAATAAACTCGGCAGTTGGAGCCTTACTTGTTACCTTCACCGTCTATATCATCCCTGCCTTAGCCCACATGCTCACGTACCGCACCGCCTCTGCCCGCCGGAACGCGGCGGAGAAACCACCGTTTTTTATCCCTAGCTGGGCTGGAGTTTACGTGATAAACGCTTTCATAGTGGTTTGGGTCCTAGTTCTCGGGTTCGGGTTTGGCGGATGGGCCAGTATGACCAACTTCATCAGGCAAATTGATACTTTTGGCCTCTTTGCCAAATGCTACCAATGCAAACCACCTCCAGCTCCGATCGCCGCCGGAGCTCACCACCGCCGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001736 GO:0001738 GO:0002009 GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0005794 GO:0005886 GO:0006355 GO:0006810 GO:0006811 GO:0006820 GO:0006865 GO:0007164 GO:0007275 GO:0008150 GO:0008509 GO:0008514 GO:0009605 GO:0009606 GO:0009607 GO:0009624 GO:0009628 GO:0009629 GO:0009630 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009914 GO:0009926 GO:0009958 GO:0009986 GO:0009987 GO:0010011 GO:0010015 GO:0010053 GO:0010054 GO:0010101 GO:0010102 GO:0010311 GO:0010328 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010817 GO:0012505 GO:0015075 GO:0015171 GO:0015318 GO:0015711 GO:0015849 GO:0016020 GO:0019219 GO:0019222 GO:0021700 GO:0022603 GO:0022622 GO:0022857 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0034220 GO:0042562 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045893 GO:0045935 GO:0046942 GO:0046943 GO:0048364 GO:0048468 GO:0048469 GO:0048518 GO:0048522 GO:0048527 GO:0048528 GO:0048646 GO:0048729 GO:0048731 GO:0048764 GO:0048765 GO:0048829 GO:0048831 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051239 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0055085 GO:0060255 GO:0060429 GO:0060688 GO:0060918 GO:0060919 GO:0065007 GO:0065008 GO:0071695 GO:0071702 GO:0071705 GO:0071944 GO:0080090 GO:0080161 GO:0090558 GO:0090627 GO:0090696 GO:0090697 GO:0090698 GO:0097708 GO:0098656 GO:0099402 GO:1900618 GO:1902680 GO:1903506 GO:1903508 GO:1903825 GO:1905039 GO:1905392 GO:1905393 GO:1905428 GO:2000026 GO:2000032 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
Aa_trans

Protein Analysis

488

Amino Acids

54.6

Weight (kDa)

8.91

Isoelectric Point (pI)

30.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aa_trans PF01490 1 - 363 1.8e-73 Transmembrane amino acid transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 989
Acc65I GGTACC 1 cut(s) 645
AccB1I GGYRCC 1 cut(s) 645
AccI GTMKAC 1 cut(s) 879
AccII CGCG 2 cut(s) 943, 1247
AclI AACGTT 1 cut(s) 992
AclWI GGATC 2 cut(s) 292, 472
AcoI YGGCCR 1 cut(s) 57
AcyI GRCGYC 1 cut(s) 165
AdeI CACNNNGTG 1 cut(s) 769
AfaI GTAC 7 cut(s) 416, 647, 722, 842, 1009, 1019, 1220
AfeI AGCGCT 1 cut(s) 1077
AfiI CCNNNNNNNGG 6 cut(s) 676, 882, 1136, 1137, 1246, 1279
AflIII ACRYGT 1 cut(s) 941
AgeI ACCGGT 1 cut(s) 1090
AgsI TTSAA 4 cut(s) 263, 364, 380, 389
AjnI CCWGG 1 cut(s) 167
AluBI AGCT 8 cut(s) 135, 177, 478, 712, 1062, 1278, 1433, 1451
AluI AGCT 8 cut(s) 135, 177, 478, 712, 1062, 1278, 1433, 1451
Alw21I GWGCWC 1 cut(s) 1453
Alw26I GTCTC 1 cut(s) 43
AlwI GGATC 2 cut(s) 292, 472
Ama87I CYCGRG 1 cut(s) 1331
Aor51HI AGCGCT 1 cut(s) 1077
AoxI GGCC 5 cut(s) 57, 616, 1139, 1353, 1393
ApeKI GCWGC 3 cut(s) 214, 403, 425
AsiGI ACCGGT 1 cut(s) 1090
Asp700I GAANNNNTTC 1 cut(s) 134
Asp718I GGTACC 1 cut(s) 645
AspLEI GCGC 1 cut(s) 1078
AspS9I GGNCC 6 cut(s) 153, 410, 701, 1139, 1321, 1353
AsuC2I CCSGG 1 cut(s) 43
AsuHPI GGTGA 5 cut(s) 20, 643, 1093, 1171, 1445
AsuNHI GCTAGC 1 cut(s) 491
AvaI CYCGRG 1 cut(s) 1331
AvaII GGWCC 4 cut(s) 153, 410, 701, 1321
BaeGI GKGCMC 1 cut(s) 334
BanI GGYRCC 1 cut(s) 645
BanII GRGCYC 2 cut(s) 435, 1453
BbsI GAAGAC 1 cut(s) 838
Bbv12I GWGCWC 1 cut(s) 1453
BbvI GCAGC 3 cut(s) 201, 390, 437
BccI CCATC 6 cut(s) 392, 589, 662, 823, 987, 1344
BceAI ACGGC 5 cut(s) 118, 202, 860, 944, 1446
BcgI CGANNNNNNTGC 4 cut(s) 311, 345, 1027, 1061
BciT130I CCWGG 1 cut(s) 169
BcnI CCSGG 1 cut(s) 43
BcoDI GTCTC 1 cut(s) 43
BfaI CTAG 3 cut(s) 492, 1275, 1325
BfoI RGCGCY 1 cut(s) 1079
BisI GCNGC 6 cut(s) 84, 215, 404, 426, 1248, 1443
BlsI GCNGC 6 cut(s) 85, 216, 405, 427, 1249, 1444
Bme1390I CCNGG 2 cut(s) 43, 169
Bme18I GGWCC 4 cut(s) 153, 410, 701, 1321
BmeT110I CYCGRG 1 cut(s) 1331
BmgT120I GGNCC 6 cut(s) 153, 410, 701, 1139, 1321, 1353
BmiI GGNNCC 7 cut(s) 154, 411, 647, 733, 1101, 1162, 1322
BmrFI CCNGG 2 cut(s) 43, 169
BmrI ACTGGG 1 cut(s) 892
BmsI GCATC 2 cut(s) 191, 828
BmtI GCTAGC 1 cut(s) 495
BmuI ACTGGG 1 cut(s) 892
BpiI GAAGAC 1 cut(s) 838
BpmI CTGGAG 2 cut(s) 1305, 1413
Bpu10I CCTNAGC 1 cut(s) 1201
BpuMI CCSGG 1 cut(s) 43
BsaAI YACGTR 2 cut(s) 1218, 1294
BsaHI GRCGYC 1 cut(s) 165
BsaJI CCNNGG 6 cut(s) 42, 613, 619, 670, 774, 803
BsaWI WCCGGW 3 cut(s) 698, 728, 1090
BsaXI ACNNNNNCTCC 2 cut(s) 1278, 1308
Bsc4I CCNNNNNNNGG 6 cut(s) 676, 882, 1136, 1137, 1246, 1279
Bse118I RCCGGY 2 cut(s) 59, 1090
Bse1I ACTGG 3 cut(s) 422, 887, 1356
Bse3DI GCAATG 2 cut(s) 121, 480
BseBI CCWGG 1 cut(s) 169
BseDI CCNNGG 6 cut(s) 42, 613, 619, 670, 774, 803
BseGI GGATG 6 cut(s) 55, 471, 741, 975, 1191, 1355
BseLI CCNNNNNNNGG 6 cut(s) 676, 882, 1136, 1137, 1246, 1279
BseMI GCAATG 2 cut(s) 121, 480
BseNI ACTGG 3 cut(s) 422, 887, 1356
BseRI GAGGAG 3 cut(s) 38, 104, 920
BseSI GKGCMC 1 cut(s) 334
BseXI GCAGC 3 cut(s) 201, 390, 437
BseYI CCCAGC 2 cut(s) 406, 1278
Bsh1236I CGCG 2 cut(s) 943, 1247
Bsh1285I CGRYCG 3 cut(s) 570, 1041, 1440
BshFI GGCC 5 cut(s) 59, 618, 1141, 1355, 1395
BshNI GGYRCC 1 cut(s) 645
BshTI ACCGGT 1 cut(s) 1090
BsiEI CGRYCG 3 cut(s) 570, 1041, 1440
BsiHKAI GWGCWC 1 cut(s) 1453
BsiHKCI CYCGRG 1 cut(s) 1331
BsiSI CCGG 7 cut(s) 42, 60, 699, 729, 1091, 1240, 1446
BslFI GGGAC 1 cut(s) 176
BslI CCNNNNNNNGG 6 cut(s) 676, 882, 1136, 1137, 1246, 1279
BsmAI GTCTC 1 cut(s) 43
BsmFI GGGAC 1 cut(s) 176
BsmI GAATGC 1 cut(s) 1050
BsnI GGCC 5 cut(s) 59, 618, 1141, 1355, 1395
BsoBI CYCGRG 1 cut(s) 1331
Bsp1286I GDGCHC 3 cut(s) 334, 435, 1453
Bsp1407I TGTACA 1 cut(s) 1007
Bsp143I GATC 4 cut(s) 284, 464, 1038, 1437
Bsp19I CCATGG 1 cut(s) 670
BspANI GGCC 5 cut(s) 59, 618, 1141, 1355, 1395
BspFNI CGCG 2 cut(s) 943, 1247
BspLI GGNNCC 7 cut(s) 154, 411, 647, 733, 1101, 1162, 1322
BspOI GCTAGC 1 cut(s) 495
BspPI GGATC 2 cut(s) 292, 472
BspQI GCTCTTC 1 cut(s) 125
BspT107I GGYRCC 1 cut(s) 645
BsrDI GCAATG 2 cut(s) 121, 480
BsrFI RCCGGY 2 cut(s) 59, 1090
BsrGI TGTACA 1 cut(s) 1007
BsrI ACTGG 3 cut(s) 422, 887, 1356
BssAI RCCGGY 2 cut(s) 59, 1090
BssECI CCNNGG 6 cut(s) 42, 613, 619, 670, 774, 803
BssMI GATC 4 cut(s) 284, 464, 1038, 1437
BssNI GRCGYC 1 cut(s) 165
BssT1I CCWWGG 3 cut(s) 619, 670, 803
Bst2UI CCWGG 1 cut(s) 169
Bst4CI ACNGT 5 cut(s) 571, 599, 775, 1183, 1263
Bst6I CTCTTC 1 cut(s) 125
BstACI GRCGYC 1 cut(s) 165
BstAUI TGTACA 1 cut(s) 1007
BstBAI YACGTR 2 cut(s) 1218, 1294
BstC8I GCNNGC 5 cut(s) 435, 493, 556, 789, 1237
BstDEI CTNAG 2 cut(s) 1070, 1201
BstDSI CCRYGG 2 cut(s) 670, 774
BstF5I GGATG 6 cut(s) 55, 471, 741, 975, 1191, 1355
BstFNI CGCG 2 cut(s) 943, 1247
BstH2I RGCGCY 1 cut(s) 1079
BstHHI GCGC 1 cut(s) 1078
BstKTI GATC 4 cut(s) 287, 467, 1041, 1440
BstMAI GTCTC 1 cut(s) 43
BstMBI GATC 4 cut(s) 284, 464, 1038, 1437
BstMCI CGRYCG 3 cut(s) 570, 1041, 1440
BstNI CCWGG 1 cut(s) 169
BstNSI RCATGY 2 cut(s) 791, 1213
BstSCI CCNGG 2 cut(s) 41, 167
BstSLI GKGCMC 1 cut(s) 334
BstUI CGCG 2 cut(s) 943, 1247
BstV1I GCAGC 3 cut(s) 201, 390, 437
BstV2I GAAGAC 1 cut(s) 838
BstX2I RGATCY 1 cut(s) 284
BstYI RGATCY 1 cut(s) 284
BsuRI GGCC 5 cut(s) 59, 618, 1141, 1355, 1395
BtgI CCRYGG 2 cut(s) 670, 774
BtgZI GCGATG 2 cut(s) 640, 806
BtsCI GGATG 6 cut(s) 55, 471, 741, 975, 1191, 1355
BtsIMutI CAGTG 1 cut(s) 313
Cac8I GCNNGC 5 cut(s) 435, 493, 556, 789, 1237
CfoI GCGC 1 cut(s) 1078
Cfr10I RCCGGY 2 cut(s) 59, 1090
Cfr13I GGNCC 6 cut(s) 153, 410, 701, 1139, 1321, 1353
CseI GACGC 2 cut(s) 173, 220
Csp6I GTAC 7 cut(s) 415, 646, 721, 841, 1008, 1018, 1219
CspAI ACCGGT 1 cut(s) 1090
CspCI CAANNNNNGTGG 2 cut(s) 174, 209
CviAII CATG 7 cut(s) 146, 534, 625, 671, 788, 970, 1210
CviQI GTAC 7 cut(s) 415, 646, 721, 841, 1008, 1018, 1219
DdeI CTNAG 2 cut(s) 1070, 1201
DpnI GATC 4 cut(s) 286, 466, 1040, 1439
DpnII GATC 4 cut(s) 284, 464, 1038, 1437
DraIII CACNNNGTG 1 cut(s) 769
EaeI YGGCCR 1 cut(s) 57
Eam1104I CTCTTC 1 cut(s) 125
EarI CTCTTC 1 cut(s) 125
EciI GGCGGA 5 cut(s) 101, 695, 862, 1265, 1362
Ecl136II GAGCTC 1 cut(s) 1451
Eco130I CCWWGG 3 cut(s) 619, 670, 803
Eco24I GRGCYC 2 cut(s) 435, 1453
Eco47I GGWCC 4 cut(s) 153, 410, 701, 1321
Eco47III AGCGCT 1 cut(s) 1077
Eco53kI GAGCTC 1 cut(s) 1451
Eco88I CYCGRG 1 cut(s) 1331
EcoICRI GAGCTC 1 cut(s) 1451
EcoO109I RGGNCCY 1 cut(s) 1321
EcoRII CCWGG 1 cut(s) 167
EcoT14I CCWWGG 3 cut(s) 619, 670, 803
EcoT22I ATGCAT 1 cut(s) 789
EcoT38I GRGCYC 2 cut(s) 435, 1453
ErhI CCWWGG 3 cut(s) 619, 670, 803
FaeI CATG 7 cut(s) 149, 537, 628, 674, 791, 973, 1213
FaqI GGGAC 1 cut(s) 176
FatI CATG 7 cut(s) 145, 533, 624, 670, 787, 969, 1209
FauI CCCGC 3 cut(s) 143, 421, 1244
FblI GTMKAC 1 cut(s) 879
Fnu4HI GCNGC 6 cut(s) 84, 215, 404, 426, 1248, 1443
FokI GGATG 6 cut(s) 62, 458, 728, 962, 1178, 1362
FriOI GRGCYC 2 cut(s) 435, 1453
Fsp4HI GCNGC 6 cut(s) 84, 215, 404, 426, 1248, 1443
FspBI CTAG 3 cut(s) 492, 1275, 1325
GlaI GCGC 1 cut(s) 1077
GluI GCNGC 6 cut(s) 84, 215, 404, 426, 1248, 1443
GsaI CCCAGC 2 cut(s) 410, 1282
GsuI CTGGAG 2 cut(s) 1305, 1413
HaeII RGCGCY 1 cut(s) 1079
HaeIII GGCC 5 cut(s) 59, 618, 1141, 1355, 1395
HapII CCGG 7 cut(s) 42, 60, 699, 729, 1091, 1240, 1446
HgaI GACGC 2 cut(s) 173, 220
HhaI GCGC 1 cut(s) 1078
Hin1I GRCGYC 1 cut(s) 165
Hin1II CATG 7 cut(s) 149, 537, 628, 674, 791, 973, 1213
Hin6I GCGC 1 cut(s) 1076
HinP1I GCGC 1 cut(s) 1076
HincII GTYRAC 1 cut(s) 210
HindII GTYRAC 1 cut(s) 210
HindIII AAGCTT 1 cut(s) 710
HinfI GANTC 2 cut(s) 26, 77
HpaII CCGG 7 cut(s) 42, 60, 699, 729, 1091, 1240, 1446
HphI GGTGA 5 cut(s) 20, 643, 1093, 1171, 1445
Hpy166II GTNNAC 6 cut(s) 210, 761, 880, 1008, 1010, 1291
Hpy188I TCNGA 4 cut(s) 464, 1043, 1104, 1437
Hpy188III TCNNGA 1 cut(s) 249
Hpy8I GTNNAC 6 cut(s) 210, 761, 880, 1008, 1010, 1291
Hpy99I CGWCG 1 cut(s) 323
HpyAV CCTTC 4 cut(s) 370, 460, 763, 1186
HpyCH4III ACNGT 5 cut(s) 571, 599, 775, 1183, 1263
HpyCH4IV ACGT 6 cut(s) 318, 372, 843, 992, 1217, 1293
HpyCH4V TGCA 5 cut(s) 182, 447, 787, 1048, 1419
HpyF3I CTNAG 2 cut(s) 1070, 1201
HpySE526I ACGT 6 cut(s) 318, 372, 843, 992, 1217, 1293
Hsp92I GRCGYC 1 cut(s) 165
Hsp92II CATG 7 cut(s) 149, 537, 628, 674, 791, 973, 1213
HspAI GCGC 1 cut(s) 1076
KpnI GGTACC 1 cut(s) 649
Kzo9I GATC 4 cut(s) 284, 464, 1038, 1437
LguI GCTCTTC 1 cut(s) 125
LmnI GCTCC 4 cut(s) 731, 1160, 1438, 1448
Lsp1109I GCAGC 3 cut(s) 201, 390, 437
LweI GCATC 2 cut(s) 191, 828
MaeI CTAG 3 cut(s) 492, 1275, 1325
MaeII ACGT 6 cut(s) 318, 372, 843, 992, 1217, 1293
MaeIII GTNAC 4 cut(s) 688, 769, 950, 1171
MalI GATC 4 cut(s) 286, 466, 1040, 1439
MboI GATC 4 cut(s) 284, 464, 1038, 1437
MboII GAAGA 3 cut(s) 86, 142, 838
MflI RGATCY 1 cut(s) 284
MhlI GDGCHC 3 cut(s) 334, 435, 1453
MluCI AATT 3 cut(s) 442, 592, 1380
MluI ACGCGT 1 cut(s) 941
MlyI GAGTC 1 cut(s) 35
MmeI TCCRAC 2 cut(s) 728, 1138
Mph1103I ATGCAT 1 cut(s) 789
MroXI GAANNNNTTC 1 cut(s) 134
MseI TTAA 4 cut(s) 278, 441, 813, 854
MspA1I CMGCKG 2 cut(s) 83, 428
MspI CCGG 7 cut(s) 42, 60, 699, 729, 1091, 1240, 1446
MspR9I CCNGG 2 cut(s) 43, 169
Mva1269I GAATGC 1 cut(s) 1050
MvaI CCWGG 1 cut(s) 169
MvnI CGCG 2 cut(s) 943, 1247
NciI CCSGG 1 cut(s) 43
NcoI CCATGG 1 cut(s) 670
NdeII GATC 4 cut(s) 284, 464, 1038, 1437
NheI GCTAGC 1 cut(s) 491
NlaIII CATG 7 cut(s) 149, 537, 628, 674, 791, 973, 1213
NlaIV GGNNCC 7 cut(s) 154, 411, 647, 733, 1101, 1162, 1322
NmeAIII GCCGAG 2 cut(s) 594, 1130
NmuCI GTSAC 3 cut(s) 688, 769, 950
NsiI ATGCAT 1 cut(s) 789
NspI RCATGY 2 cut(s) 791, 1213
PaeI GCATGC 1 cut(s) 791
PciSI GCTCTTC 1 cut(s) 125
PcsI WCGNNNNNNNCGW 1 cut(s) 771
PctI GAATGC 1 cut(s) 1050
PdmI GAANNNNTTC 1 cut(s) 134
PfeI GAWTC 1 cut(s) 77
PinAI ACCGGT 1 cut(s) 1090
PkrI GCNGC 6 cut(s) 85, 216, 405, 427, 1249, 1444
Ple19I CGATCG 2 cut(s) 1041, 1440
PleI GAGTC 1 cut(s) 34
PpsI GAGTC 1 cut(s) 34
Ppu21I YACGTR 2 cut(s) 1218, 1294
PpuMI RGGWCCY 1 cut(s) 1321
PsiI TTATAA 1 cut(s) 989
Psp124BI GAGCTC 1 cut(s) 1453
Psp1406I AACGTT 1 cut(s) 992
Psp5II RGGWCCY 1 cut(s) 1321
Psp6I CCWGG 1 cut(s) 167
PspFI CCCAGC 2 cut(s) 406, 1278
PspGI CCWGG 1 cut(s) 167
PspN4I GGNNCC 7 cut(s) 154, 411, 647, 733, 1101, 1162, 1322
PspPI GGNCC 6 cut(s) 153, 410, 701, 1139, 1321, 1353
PspPPI RGGWCCY 1 cut(s) 1321
PsuI RGATCY 1 cut(s) 284
PvuI CGATCG 2 cut(s) 1041, 1440
RsaI GTAC 7 cut(s) 416, 647, 722, 842, 1009, 1019, 1220
RsaNI GTAC 7 cut(s) 415, 646, 721, 841, 1008, 1018, 1219
SacI GAGCTC 1 cut(s) 1453
SapI GCTCTTC 1 cut(s) 125
SaqAI TTAA 4 cut(s) 278, 441, 813, 854
SatI GCNGC 6 cut(s) 84, 215, 404, 426, 1248, 1443
Sau3AI GATC 4 cut(s) 284, 464, 1038, 1437
Sau96I GGNCC 6 cut(s) 153, 410, 701, 1139, 1321, 1353
SchI GAGTC 1 cut(s) 35
ScrFI CCNGG 2 cut(s) 43, 169
SduI GDGCHC 3 cut(s) 334, 435, 1453
SfaNI GCATC 2 cut(s) 191, 828
SinI GGWCC 4 cut(s) 153, 410, 701, 1321
SphI GCATGC 1 cut(s) 791
Sse9I AATT 3 cut(s) 442, 592, 1380
SspI AATATT 2 cut(s) 255, 267
SspMI CTAG 3 cut(s) 492, 1275, 1325
SstI GAGCTC 1 cut(s) 1453
StyD4I CCNGG 2 cut(s) 41, 167
StyI CCWWGG 3 cut(s) 619, 670, 803
TaaI ACNGT 5 cut(s) 571, 599, 775, 1183, 1263
TaiI ACGT 6 cut(s) 321, 375, 846, 995, 1220, 1296
TaqI TCGA 1 cut(s) 321
TasI AATT 3 cut(s) 442, 592, 1380
TatI WGTACW 3 cut(s) 720, 1007, 1017
TauI GCSGC 3 cut(s) 86, 1250, 1445
TfiI GAWTC 1 cut(s) 77
Tru1I TTAA 4 cut(s) 278, 441, 813, 854
Tru9I TTAA 4 cut(s) 278, 441, 813, 854
TscAI CASTG 1 cut(s) 313
TseFI GTSAC 3 cut(s) 688, 769, 950
TseI GCWGC 3 cut(s) 214, 403, 425
Tsp45I GTSAC 3 cut(s) 688, 769, 950
TspDTI ATGAA 4 cut(s) 143, 565, 1297, 1360
TspGWI ACGGA 3 cut(s) 402, 852, 938
TspRI CASTG 1 cut(s) 313
VpaK11BI GGWCC 4 cut(s) 153, 410, 701, 1321
XceI RCATGY 2 cut(s) 791, 1213
XmiI GTMKAC 1 cut(s) 879
XmnI GAANNNNTTC 1 cut(s) 134
XspI CTAG 3 cut(s) 492, 1275, 1325
Zsp2I ATGCAT 1 cut(s) 789
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.