Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003267.1

Orthogroup ID

OG0001953

Physical Location & Seq

Genomic Coordinates Reverse (-)

9315 .. 12715

Gene Structure 3401 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003267.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1557 bp

ctgaaagcaaaggaaaaagctgatacatcaaagtcaagagcccggggagggagagaaagtgacatttcaagcaagatctaccaggatttagtcgttaccacaatgttgcctcagaagcaagcagaggaggcaatagtctccaactttagcgagggagcagatcatgaaggaaaggaattgggagcagaagagaataaagatggagaaaacgcctcattgtttagtgtcaagaactttctctggcatggtggctctgcttgggacgcctggttcagctgtgcttccaatcaagtggcgcaagtactattgacacttccatactcattctctcagctcggacttttatccggtatcttgcttcagctgttctatgggatcgtcggaagctggacggcttatctaatcagtgtgctctatattgagtaccggagcaggaaggagaaggagaatgttaatttcaagaaccatgttatccagtggtttgaagtgcttgatgggttacttggtccttactggaaagcagtggggcttgccttcaactgtactttcctcctatttggatctgtcattcagctcattgcttgtgcaagcaacatatattacatcaatgacaatttggacaagaggacttggacatatatctttggagcttgctgtgccactacagtgttcataccttctttccataactatcggatttggtctttccttggacttggaatgaccacttacacagcctggtacatgaccatagcagctgctgttcatggacaggttgaaggtgttacacactcggctccccacaagatggtgctgtatttcaccggcgccaccaacatactatacacctttggtggccatgctgttacagtggaaatcatgcatgccatgtggaagccacaaaagttcaagtacatttacttgtttgccacactctatgttttcacattgacaattccttcggcttcggtcgtttactgggccttcggcgatgagcttctcaaccattccaacgccttctctctcctccccaagaatgcgtggcgtgacgctgctgttatcctcatgctcattcaccagtttattacttttgggtttgcttgcacaccattgtactttgtgtgggagaaggtgatcggtatgcatgacacaagaagcatttgcttgagggcactggctaggcttccagttgtgattccaatttggttcttggctattatctttccgtttttcggaccgattaactctgcggttggggctctcttggttagtttcacagtctacatcatcccatctttggctcatatgctcacatacagaaaagcatctgccagacagaatgctgcggagaagccaccattctttttaccaagttggacagccatgtttgtgatcaactccttcatagttgtgtgggttctggtaatcgggttcgggttcggtggatgggctagcatgaccaactttgtgaggcaagtggacacatttgggctgtttgcaaagtgctatcaatgcaagcctccaaagccagtagtagcaccagccccacgtaactaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001736 GO:0001738 GO:0002009 GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0005794 GO:0005886 GO:0006355 GO:0006810 GO:0006811 GO:0006820 GO:0006865 GO:0007164 GO:0007275 GO:0008150 GO:0008509 GO:0008514 GO:0009605 GO:0009606 GO:0009607 GO:0009624 GO:0009628 GO:0009629 GO:0009630 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009914 GO:0009926 GO:0009958 GO:0009986 GO:0009987 GO:0010011 GO:0010015 GO:0010053 GO:0010054 GO:0010101 GO:0010102 GO:0010311 GO:0010328 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010817 GO:0012505 GO:0015075 GO:0015171 GO:0015318 GO:0015711 GO:0015849 GO:0016020 GO:0019219 GO:0019222 GO:0021700 GO:0022603 GO:0022622 GO:0022857 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0034220 GO:0042562 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045893 GO:0045935 GO:0046942 GO:0046943 GO:0048364 GO:0048468 GO:0048469 GO:0048518 GO:0048522 GO:0048527 GO:0048528 GO:0048646 GO:0048729 GO:0048731 GO:0048764 GO:0048765 GO:0048829 GO:0048831 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051239 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0055085 GO:0060255 GO:0060429 GO:0060688 GO:0060918 GO:0060919 GO:0065007 GO:0065008 GO:0071695 GO:0071702 GO:0071705 GO:0071944 GO:0080090 GO:0080161 GO:0090558 GO:0090627 GO:0090696 GO:0090697 GO:0090698 GO:0097708 GO:0098656 GO:0099402 GO:1900618 GO:1902680 GO:1903506 GO:1903508 GO:1903825 GO:1905039 GO:1905392 GO:1905393 GO:1905428 GO:2000026 GO:2000032 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Aa_trans

Protein Analysis

518

Amino Acids

58.2

Weight (kDa)

8.86

Isoelectric Point (pI)

30.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001953)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38120 AT2G38120 AT5G01240 AT5G01240
fragaria_vesca	FvH4_6g11840 FvH4_6g11840 FvH4_6g11840 FvH4_6g11840 FvH4_6g11840 FvH4_7g24200 FvH4_7g24200 FvH4_7g24200 FvH4_7g24200 FvH4_7g24200
malus_domestica	MD01G1149100.v1.1 MD04G1149300.v1.1 MD07G1215900.v1.1 MD12G1162400.v1.1
prunus_persica	Prupe.2G247800_v2.0.a1 Prupe.6G273000_v2.0.a1
pyrus_communis	pycom01g16750 pycom04g13460 pycom12g15450
rosa_chinensis	RchiOBHm_Chr1g0369771 RchiOBHm_Chr3g0463551
rosa_laevigata	RLG00000024771 RLG00000027107
rosa_multiflora	Rmu_sc0001154.1_g000037 Rmu_sc0003267.1_g000002 Rmu_sc0042064.1_g000001
rosa_roxburghii	Rroxscaffold_4G00287400 Rroxscaffold_6G00416440
rosa_rugosa	Rorug01G0352100 Rorug03G0065900 Rorug03G0065900
rosa_samantha	Rh1AG360500 Rh1BG324200 Rh1CG337400 Rh1DG354700 Rh3AG122900 Rh3BG128000 Rh3CG129600 Rh3DG128500
rosa_wichuraiana	Rw0G010490 Rw1G031750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	827
AccB7I	CCANNNNNTGG	1 cut(s)	808
AccI	GTMKAC	1 cut(s)	1281
AciI	CCGC	2 cut(s)	1250, 1346
AclWI	GGATC	2 cut(s)	383, 568
AcoI	YGGCCR	1 cut(s)	856
AcuI	CTGAAG	1 cut(s)	344
AcyI	GRCGYC	2 cut(s)	264, 828
AfaI	GTAC	6 cut(s)	303, 425, 544, 743, 914, 1115
AfiI	CCNNNNNNNGG	4 cut(s)	48, 808, 1232, 1297
AgsI	TTSAA	6 cut(s)	69, 460, 485, 538, 779, 910
AjnI	CCWGG	3 cut(s)	81, 266, 737
AleI	CACNNNNGTG	1 cut(s)	665
AloI	GAACNNNNNNTCC	2 cut(s)	254, 286
AluBI	AGCT	9 cut(s)	20, 276, 334, 364, 387, 574, 650, 758, 997
AluI	AGCT	9 cut(s)	20, 276, 334, 364, 387, 574, 650, 758, 997
Alw21I	GWGCWC	1 cut(s)	414
Alw26I	GTCTC	1 cut(s)	142
AlwI	GGATC	2 cut(s)	383, 568
AlwNI	CAGNNNCTG	1 cut(s)	761
Ama87I	CYCGRG	1 cut(s)	42
AoxI	GGCC	2 cut(s)	856, 981
ApeKI	GCWGC	4 cut(s)	755, 758, 1052, 1343
ArsI	GACNNNNNNTTYG	2 cut(s)	943, 975
AspLEI	GCGC	2 cut(s)	298, 830
AspS9I	GGNCC	3 cut(s)	506, 981, 1235
AsuC2I	CCSGG	2 cut(s)	43, 44
AsuHPI	GGTGA	3 cut(s)	814, 1067, 1144
AsuNHI	GCTAGC	1 cut(s)	1451
AvaI	CYCGRG	1 cut(s)	42
AvaII	GGWCC	2 cut(s)	506, 1235
BaeGI	GKGCMC	1 cut(s)	1174
BalI	TGGCCA	1 cut(s)	858
BanI	GGYRCC	1 cut(s)	827
BanII	GRGCYC	2 cut(s)	43, 1261
Bbv12I	GWGCWC	1 cut(s)	414
BbvI	GCAGC	4 cut(s)	745, 767, 1039, 1330
BccI	CCATC	5 cut(s)	194, 488, 802, 1300, 1440
BceAI	ACGGC	1 cut(s)	408
BciT130I	CCWGG	3 cut(s)	83, 268, 739
BclI	TGATCA	1 cut(s)	1392
BcnI	CCSGG	2 cut(s)	43, 44
BcoDI	GTCTC	1 cut(s)	142
BfaI	CTAG	2 cut(s)	1179, 1452
BfmI	CTRYAG	1 cut(s)	663
BfoI	RGCGCY	1 cut(s)	831
BglII	AGATCT	1 cut(s)	75
BisI	GCNGC	4 cut(s)	756, 759, 1053, 1344
BlsI	GCNGC	4 cut(s)	757, 760, 1054, 1345
BmcAI	AGTACT	1 cut(s)	303
Bme1390I	CCNGG	5 cut(s)	43, 44, 83, 268, 739
Bme18I	GGWCC	2 cut(s)	506, 1235
BmeT110I	CYCGRG	1 cut(s)	42
BmgT120I	GGNCC	3 cut(s)	506, 981, 1235
BmiI	GGNNCC	2 cut(s)	798, 829
BmrFI	CCNGG	5 cut(s)	43, 44, 83, 268, 739
BmrI	ACTGGG	1 cut(s)	988
BmsI	GCATC	1 cut(s)	1334
BmtI	GCTAGC	1 cut(s)	1455
BmuI	ACTGGG	1 cut(s)	988
BpuEI	CTTGAG	1 cut(s)	1186
BpuMI	CCSGG	2 cut(s)	43, 44
BsaAI	YACGTR	1 cut(s)	1550
BsaHI	GRCGYC	2 cut(s)	264, 828
BsaJI	CCNNGG	3 cut(s)	42, 43, 709
BsaWI	WCCGGW	2 cut(s)	347, 426
BsaXI	ACNNNNNCTCC	2 cut(s)	43, 73
Bsc4I	CCNNNNNNNGG	4 cut(s)	48, 808, 1232, 1297
Bse118I	RCCGGY	1 cut(s)	824
Bse1I	ACTGG	7 cut(s)	475, 518, 983, 1078, 1179, 1187, 1529
Bse3DI	GCAATG	1 cut(s)	576
BseBI	CCWGG	3 cut(s)	83, 268, 739
BseDI	CCNNGG	3 cut(s)	42, 43, 709
BseGI	GGATG	2 cut(s)	1287, 1451
BseLI	CCNNNNNNNGG	4 cut(s)	48, 808, 1232, 1297
BseMI	GCAATG	1 cut(s)	576
BseMII	CTCAG	2 cut(s)	125, 344
BseNI	ACTGG	7 cut(s)	475, 518, 983, 1078, 1179, 1187, 1529
BseRI	GAGGAG	2 cut(s)	140, 1016
BseSI	GKGCMC	1 cut(s)	1174
BseXI	GCAGC	4 cut(s)	745, 767, 1039, 1330
Bsh1285I	CGRYCG	1 cut(s)	972
BshFI	GGCC	2 cut(s)	858, 983
BshNI	GGYRCC	1 cut(s)	827
BsiEI	CGRYCG	1 cut(s)	972
BsiHKAI	GWGCWC	1 cut(s)	414
BsiHKCI	CYCGRG	1 cut(s)	42
BsiSI	CCGG	4 cut(s)	43, 348, 427, 825
BslFI	GGGAC	1 cut(s)	275
BslI	CCNNNNNNNGG	4 cut(s)	48, 808, 1232, 1297
BsmAI	GTCTC	1 cut(s)	142
BsmFI	GGGAC	1 cut(s)	275
BsmI	GAATGC	2 cut(s)	1042, 1345
BsnI	GGCC	2 cut(s)	858, 983
BsoBI	CYCGRG	1 cut(s)	42
Bsp1286I	GDGCHC	4 cut(s)	43, 414, 1174, 1261
Bsp143I	GATC	6 cut(s)	75, 160, 375, 560, 1134, 1392
BspACI	CCGC	2 cut(s)	1250, 1346
BspANI	GGCC	2 cut(s)	858, 983
BspCNI	CTCAG	2 cut(s)	124, 343
BspHI	TCATGA	1 cut(s)	163
BspLI	GGNNCC	2 cut(s)	798, 829
BspOI	GCTAGC	1 cut(s)	1455
BspPI	GGATC	2 cut(s)	383, 568
BspT107I	GGYRCC	1 cut(s)	827
BsrDI	GCAATG	1 cut(s)	576
BsrFI	RCCGGY	1 cut(s)	824
BsrI	ACTGG	7 cut(s)	475, 518, 983, 1078, 1179, 1187, 1529
BssAI	RCCGGY	1 cut(s)	824
BssECI	CCNNGG	3 cut(s)	42, 43, 709
BssMI	GATC	6 cut(s)	75, 160, 375, 560, 1134, 1392
BssNI	GRCGYC	2 cut(s)	264, 828
BssT1I	CCWWGG	1 cut(s)	709
Bst2UI	CCWGG	3 cut(s)	83, 268, 739
Bst4CI	ACNGT	4 cut(s)	542, 667, 871, 1279
Bst6I	CTCTTC	1 cut(s)	183
BstACI	GRCGYC	2 cut(s)	264, 828
BstBAI	YACGTR	1 cut(s)	1550
BstC8I	GCNNGC	8 cut(s)	120, 531, 589, 652, 885, 1102, 1453, 1517
BstDEI	CTNAG	2 cut(s)	111, 330
BstF5I	GGATG	2 cut(s)	1287, 1451
BstH2I	RGCGCY	1 cut(s)	831
BstHHI	GCGC	2 cut(s)	298, 830
BstKTI	GATC	6 cut(s)	78, 163, 378, 563, 1137, 1395
BstMAI	GTCTC	1 cut(s)	142
BstMBI	GATC	6 cut(s)	75, 160, 375, 560, 1134, 1392
BstMCI	CGRYCG	1 cut(s)	972
BstMWI	GCNNNNNNNGC	7 cut(s)	115, 128, 263, 656, 1256, 1512, 1525
BstNI	CCWGG	3 cut(s)	83, 268, 739
BstNSI	RCATGY	1 cut(s)	887
BstSCI	CCNGG	5 cut(s)	41, 42, 81, 266, 737
BstSFI	CTRYAG	1 cut(s)	663
BstSLI	GKGCMC	1 cut(s)	1174
BstV1I	GCAGC	4 cut(s)	745, 767, 1039, 1330
BstX2I	RGATCY	2 cut(s)	75, 560
BstXI	CCANNNNNNTGG	1 cut(s)	292
BstYI	RGATCY	2 cut(s)	75, 560
BsuRI	GGCC	2 cut(s)	858, 983
BtgZI	GCGATG	1 cut(s)	1005
BtsCI	GGATG	2 cut(s)	1287, 1451
BtsI	GCAGTG	1 cut(s)	528
BtsIMutI	CAGTG	6 cut(s)	412, 482, 528, 672, 876, 1172
Cac8I	GCNNGC	8 cut(s)	120, 531, 589, 652, 885, 1102, 1453, 1517
CaiI	CAGNNNCTG	1 cut(s)	761
CciI	TCATGA	1 cut(s)	163
CfoI	GCGC	2 cut(s)	298, 830
Cfr10I	RCCGGY	1 cut(s)	824
Cfr13I	GGNCC	3 cut(s)	506, 981, 1235
Cfr9I	CCCGGG	1 cut(s)	42
CpoI	CGGWCCG	1 cut(s)	1235
CseI	GACGC	2 cut(s)	272, 1058
Csp6I	GTAC	6 cut(s)	302, 424, 543, 742, 913, 1114
CspI	CGGWCCG	1 cut(s)	1235
CviQI	GTAC	6 cut(s)	302, 424, 543, 742, 913, 1114
DdeI	CTNAG	2 cut(s)	111, 330
DinI	GGCGCC	1 cut(s)	829
DpnI	GATC	6 cut(s)	77, 162, 377, 562, 1136, 1394
DpnII	GATC	6 cut(s)	75, 160, 375, 560, 1134, 1392
EaeI	YGGCCR	1 cut(s)	856
Eam1104I	CTCTTC	1 cut(s)	183
EarI	CTCTTC	1 cut(s)	183
Eco130I	CCWWGG	1 cut(s)	709
Eco24I	GRGCYC	2 cut(s)	43, 1261
Eco47I	GGWCC	2 cut(s)	506, 1235
Eco57I	CTGAAG	1 cut(s)	344
Eco88I	CYCGRG	1 cut(s)	42
EcoRII	CCWGG	3 cut(s)	81, 266, 737
EcoT14I	CCWWGG	1 cut(s)	709
EcoT22I	ATGCAT	2 cut(s)	885, 1146
EcoT38I	GRGCYC	2 cut(s)	43, 1261
EgeI	GGCGCC	1 cut(s)	829
EheI	GGCGCC	1 cut(s)	829
ErhI	CCWWGG	1 cut(s)	709
FaqI	GGGAC	1 cut(s)	275
FauNDI	CATATG	1 cut(s)	1305
FbaI	TGATCA	1 cut(s)	1392
FblI	GTMKAC	1 cut(s)	1281
Fnu4HI	GCNGC	4 cut(s)	756, 759, 1053, 1344
FokI	GGATG	2 cut(s)	1274, 1458
FriOI	GRGCYC	2 cut(s)	43, 1261
Fsp4HI	GCNGC	4 cut(s)	756, 759, 1053, 1344
FspBI	CTAG	2 cut(s)	1179, 1452
GlaI	GCGC	2 cut(s)	297, 829
GluI	GCNGC	4 cut(s)	756, 759, 1053, 1344
HaeII	RGCGCY	1 cut(s)	831
HaeIII	GGCC	2 cut(s)	858, 983
HapII	CCGG	4 cut(s)	43, 348, 427, 825
HgaI	GACGC	2 cut(s)	272, 1058
HhaI	GCGC	2 cut(s)	298, 830
Hin1I	GRCGYC	2 cut(s)	264, 828
Hin6I	GCGC	2 cut(s)	296, 828
HinP1I	GCGC	2 cut(s)	296, 828
HinfI	GANTC	1 cut(s)	1195
HpaII	CCGG	4 cut(s)	43, 348, 427, 825
HphI	GGTGA	3 cut(s)	814, 1067, 1144
Hpy166II	GTNNAC	3 cut(s)	976, 1282, 1480
Hpy188I	TCNGA	5 cut(s)	114, 338, 383, 696, 1235
Hpy188III	TCNNGA	4 cut(s)	36, 164, 229, 460
Hpy8I	GTNNAC	3 cut(s)	976, 1282, 1480
Hpy99I	CGWCG	1 cut(s)	383
HpyCH4III	ACNGT	4 cut(s)	542, 667, 871, 1279
HpyCH4IV	ACGT	1 cut(s)	1549
HpyCH4V	TGCA	6 cut(s)	587, 883, 1104, 1144, 1499, 1515
HpyF10VI	GCNNNNNNNGC	7 cut(s)	115, 128, 263, 656, 1256, 1512, 1525
HpyF3I	CTNAG	2 cut(s)	111, 330
HpySE526I	ACGT	1 cut(s)	1549
Hsp92I	GRCGYC	2 cut(s)	264, 828
HspAI	GCGC	2 cut(s)	296, 828
KasI	GGCGCC	1 cut(s)	827
Ksp22I	TGATCA	1 cut(s)	1392
Kzo9I	GATC	6 cut(s)	75, 160, 375, 560, 1134, 1392
LmnI	GCTCC	5 cut(s)	155, 182, 429, 647, 802
Lsp1109I	GCAGC	4 cut(s)	745, 767, 1039, 1330
LweI	GCATC	1 cut(s)	1334
MaeI	CTAG	2 cut(s)	1179, 1452
MaeII	ACGT	1 cut(s)	1549
MaeIII	GTNAC	7 cut(s)	59, 94, 498, 784, 865, 1046, 1550
MalI	GATC	6 cut(s)	77, 162, 377, 562, 1136, 1394
MboI	GATC	6 cut(s)	75, 160, 375, 560, 1134, 1392
MboII	GAAGA	1 cut(s)	200
MflI	RGATCY	2 cut(s)	75, 560
MhlI	GDGCHC	4 cut(s)	43, 414, 1174, 1261
MlsI	TGGCCA	1 cut(s)	858
MluCI	AATT	5 cut(s)	176, 454, 613, 954, 1200
MluNI	TGGCCA	1 cut(s)	858
Mly113I	GGCGCC	1 cut(s)	828
MmeI	TCCRAC	4 cut(s)	165, 361, 1035, 1355
Mox20I	TGGCCA	1 cut(s)	858
Mph1103I	ATGCAT	2 cut(s)	885, 1146
MscI	TGGCCA	1 cut(s)	858
MseI	TTAA	2 cut(s)	453, 1242
MslI	CAYNNNNRTG	3 cut(s)	665, 1388, 1409
Msp20I	TGGCCA	1 cut(s)	858
MspA1I	CMGCKG	3 cut(s)	276, 364, 758
MspI	CCGG	4 cut(s)	43, 348, 427, 825
MspR9I	CCNGG	5 cut(s)	43, 44, 83, 268, 739
Mva1269I	GAATGC	2 cut(s)	1042, 1345
MvaI	CCWGG	3 cut(s)	83, 268, 739
MwoI	GCNNNNNNNGC	7 cut(s)	115, 128, 263, 656, 1256, 1512, 1525
NarI	GGCGCC	1 cut(s)	828
NciI	CCSGG	2 cut(s)	43, 44
NdeI	CATATG	1 cut(s)	1305
NdeII	GATC	6 cut(s)	75, 160, 375, 560, 1134, 1392
NheI	GCTAGC	1 cut(s)	1451
NlaIV	GGNNCC	2 cut(s)	798, 829
NmeAIII	GCCGAG	1 cut(s)	773
NmuCI	GTSAC	2 cut(s)	59, 1046
NsiI	ATGCAT	2 cut(s)	885, 1146
NspI	RCATGY	1 cut(s)	887
OliI	CACNNNNGTG	1 cut(s)	665
PaeI	GCATGC	1 cut(s)	887
PagI	TCATGA	1 cut(s)	163
PctI	GAATGC	2 cut(s)	1042, 1345
PfeI	GAWTC	1 cut(s)	1195
PflMI	CCANNNNNTGG	1 cut(s)	808
PkrI	GCNGC	4 cut(s)	757, 760, 1054, 1345
PluTI	GGCGCC	1 cut(s)	831
Ppu21I	YACGTR	1 cut(s)	1550
Psp6I	CCWGG	3 cut(s)	81, 266, 737
PspGI	CCWGG	3 cut(s)	81, 266, 737
PspN4I	GGNNCC	2 cut(s)	798, 829
PspPI	GGNCC	3 cut(s)	506, 981, 1235
PstNI	CAGNNNCTG	1 cut(s)	761
PsuI	RGATCY	2 cut(s)	75, 560
PvuII	CAGCTG	3 cut(s)	276, 364, 758
RsaI	GTAC	6 cut(s)	303, 425, 544, 743, 914, 1115
RsaNI	GTAC	6 cut(s)	302, 424, 543, 742, 913, 1114
RseI	CAYNNNNRTG	3 cut(s)	665, 1388, 1409
Rsr2I	CGGWCCG	1 cut(s)	1235
RsrII	CGGWCCG	1 cut(s)	1235
SaqAI	TTAA	2 cut(s)	453, 1242
SatI	GCNGC	4 cut(s)	756, 759, 1053, 1344
Sau3AI	GATC	6 cut(s)	75, 160, 375, 560, 1134, 1392
Sau96I	GGNCC	3 cut(s)	506, 981, 1235
ScaI	AGTACT	1 cut(s)	303
ScrFI	CCNGG	5 cut(s)	43, 44, 83, 268, 739
SduI	GDGCHC	4 cut(s)	43, 414, 1174, 1261
SfaNI	GCATC	1 cut(s)	1334
SfcI	CTRYAG	1 cut(s)	663
SfoI	GGCGCC	1 cut(s)	829
SgrAI	CRCCGGYG	1 cut(s)	824
SinI	GGWCC	2 cut(s)	506, 1235
SmaI	CCCGGG	1 cut(s)	44
SmiMI	CAYNNNNRTG	3 cut(s)	665, 1388, 1409
SmlI	CTYRAG	1 cut(s)	1165
SmoI	CTYRAG	1 cut(s)	1165
SphI	GCATGC	1 cut(s)	887
Sse9I	AATT	5 cut(s)	176, 454, 613, 954, 1200
SsiI	CCGC	2 cut(s)	1250, 1346
SspDI	GGCGCC	1 cut(s)	827
SspMI	CTAG	2 cut(s)	1179, 1452
StyD4I	CCNGG	5 cut(s)	41, 42, 81, 266, 737
StyI	CCWWGG	1 cut(s)	709
TaaI	ACNGT	4 cut(s)	542, 667, 871, 1279
TaiI	ACGT	1 cut(s)	1552
TaqII	GACCGA	2 cut(s)	958, 1252
TasI	AATT	5 cut(s)	176, 454, 613, 954, 1200
TatI	WGTACW	4 cut(s)	301, 542, 912, 1113
TfiI	GAWTC	1 cut(s)	1195
Tru1I	TTAA	2 cut(s)	453, 1242
Tru9I	TTAA	2 cut(s)	453, 1242
TscAI	CASTG	6 cut(s)	412, 482, 528, 672, 876, 1179
TseFI	GTSAC	2 cut(s)	59, 1046
TseI	GCWGC	4 cut(s)	755, 758, 1052, 1343
Tsp45I	GTSAC	2 cut(s)	59, 1046
TspDTI	ATGAA	4 cut(s)	180, 661, 755, 1393
TspGWI	ACGGA	1 cut(s)	1215
TspMI	CCCGGG	1 cut(s)	42
TspRI	CASTG	6 cut(s)	412, 482, 528, 672, 876, 1179
Van91I	CCANNNNNTGG	1 cut(s)	808
VpaK11BI	GGWCC	2 cut(s)	506, 1235
XceI	RCATGY	1 cut(s)	887
XmaI	CCCGGG	1 cut(s)	42
XmiI	GTMKAC	1 cut(s)	1281
XspI	CTAG	2 cut(s)	1179, 1452
ZrmI	AGTACT	1 cut(s)	303
Zsp2I	ATGCAT	2 cut(s)	885, 1146

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.