Prupe.2G247800_v2.0.a1

Auxin transporter-like protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
26382180 .. 26386468
4289 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G247800.1

Sequence Viewer

Length: 1440 bp
ATGCAACCTCAGAAACAAGCAGAGGAGGCCATAGTCTCAAGCTTCAACCAAACTGATCATCATGATGACAGAGAGGAAGAAGAAGGACCAGATCAGCAGTCTGCTTTTAGCCTCACAAGCTTTCTCTGGCATGGTGGCTCCGTCTATGATGCCTGGTTTAGCTGTGCATCAAATCAGGTTGCTCAGGTTCTGCTCACTCTGCCATACTCTTTCTCCCAACTGGGCATGCTTTCAGGCATCATATTCCAAATTTTTTATGGTATTTTGGGAAGCTGGACTGCTTATCTGATCAGTATTCTCTACGTTGAGTACCGAAGTCGAAAAGAAAAAGAAAATGTCAGCTTCAAGAACCATGTCATACAGTGGTTTGAAGTGTTAGATGGTTTACTGGGTCCATACTGGAAAGCCGTTGGATTGGCCTTCAACTGCACTTTCCTTCTCTTTGGATCTGTTATCCAACTCATAGGTTGTGCAAGCAACATATACTATATAAATGACAATCTGGACAAGAGGACATGGACGTACATATTCGGAGCTTGCTGTGCCACCACTGTGTTCATACCCTCTTTCCACAACTACAGAATCTGGTCTTTTCTTGGGCTTGGCATGACCACCTACACTGCTTGGTATATGACCATTGCAGCCATAGTTCATGGCCAGGCTGAGGGTGTAACACACTCGGGACCAAAGAGAATGGTCTTGTATTTCACTGGCGCCACCAACATACTCTACACTTTCGGCGGCCACGCCGTCACTGTGGAAATTATGCATGCAATGTGGAAGCCTCAGAAGTTTAAGTATGTATATCTCTTTGCTACCCTCTATGTATTCACTCTCACCCTTCCATCTGCAACTGCTGTGTACTGGGCCTTTGGGGACCAACTCCTCACTCACTCAAACGCCTTTGCCCTCCTTCCCCGGAATAAATGGCGCGATGCCGGGGTCACCTTGATGCTTATTCACCAGTTTATCACATTTGGGTTTGCTTGTACGCCATTGTATTTTGTGTGGGAGAAAGTCATAGGAATGCATGACACCAAGAGCATATGCTTGAGGGCTCTTGCCAGGTTGCCTGTGGTGATACCAATTTGGTTCTTGGCCATCATATTCCCCTTCTTTGGTCCCATTAACTCAGCTGTTGGGTCTCTTTTGGTGAGCTTCACTGTCTACATCATCCCCGCCTTAGCCCATATGCTCACTTTCAGATCTGCATCTGCTCGTCAGAATGCGGCAGAGAAGCTTCCATTTTTCCTCCCGAGCTGGACGGGGATGTATGTGGTGAACGCATTTATAGTGGTGTGGGTGTTCATAGTCGGGTTCGGATTCGGTGGGTGGGCTAGCATGACCAACTTCATCAAGCAAGTTGACACTTTTGGGTTGTTCGCCAAGTGCTACCAGTGCCCTCCCAAAGTCTCAGCCTCCCCACCAGTACATCACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

480

Amino Acids

54.13

Weight (kDa)

8.27

Isoelectric Point (pI)

33.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 713
AccI GTMKAC 1 cut(s) 1167
AccII CGCG 1 cut(s) 933
AciI CCGC 3 cut(s) 741, 1179, 1229
AclWI GGATC 1 cut(s) 454
AcoI YGGCCR 3 cut(s) 655, 742, 1098
AcsI RAATTY 1 cut(s) 249
AcyI GRCGYC 1 cut(s) 714
AfaI GTAC 5 cut(s) 311, 524, 863, 991, 1431
AfiI CCNNNNNNNGG 2 cut(s) 664, 1118
AgsI TTSAA 4 cut(s) 46, 346, 371, 424
AjnI CCWGG 3 cut(s) 152, 657, 1064
AleI CACNNNNGTG 1 cut(s) 551
Alw26I GTCTC 3 cut(s) 40, 1149, 1417
AlwI GGATC 1 cut(s) 454
AlwNI CAGNNNCTG 2 cut(s) 190, 585
Ama87I CYCGRG 2 cut(s) 679, 1255
AoxI GGCC 6 cut(s) 27, 417, 655, 742, 867, 1098
ApeKI GCWGC 1 cut(s) 641
ApoI RAATTY 1 cut(s) 249
AspLEI GCGC 2 cut(s) 716, 933
AspS9I GGNCC 6 cut(s) 86, 392, 683, 867, 877, 1121
AsuC2I CCSGG 2 cut(s) 919, 940
AsuHPI GGTGA 6 cut(s) 829, 937, 953, 1090, 1165, 1291
AsuNHI GCTAGC 1 cut(s) 1337
AvaI CYCGRG 2 cut(s) 679, 1255
AvaII GGWCC 5 cut(s) 86, 392, 683, 877, 1121
BaeGI GKGCMC 1 cut(s) 1403
BalI TGGCCA 2 cut(s) 657, 1100
BanI GGYRCC 1 cut(s) 713
BanII GRGCYC 1 cut(s) 1060
BbvCI CCTCAGC 1 cut(s) 663
BbvI GCAGC 1 cut(s) 653
BccI CCATC 3 cut(s) 374, 853, 1109
BceAI ACGGC 2 cut(s) 392, 734
BciT130I CCWGG 3 cut(s) 154, 659, 1066
BclI TGATCA 2 cut(s) 55, 288
BcnI CCSGG 2 cut(s) 919, 940
BcoDI GTCTC 3 cut(s) 40, 1149, 1417
BfaI CTAG 1 cut(s) 1338
BfmI CTRYAG 1 cut(s) 577
BfoI RGCGCY 1 cut(s) 717
BglII AGATCT 1 cut(s) 1205
BisI GCNGC 3 cut(s) 642, 742, 1230
BlsI GCNGC 3 cut(s) 643, 743, 1231
Bme1390I CCNGG 5 cut(s) 154, 659, 919, 940, 1066
Bme18I GGWCC 5 cut(s) 86, 392, 683, 877, 1121
BmeT110I CYCGRG 2 cut(s) 679, 1255
BmgT120I GGNCC 6 cut(s) 86, 392, 683, 867, 877, 1121
BmiI GGNNCC 6 cut(s) 139, 393, 684, 715, 878, 1123
BmrFI CCNGG 5 cut(s) 154, 659, 919, 940, 1066
BmrI ACTGGG 3 cut(s) 230, 398, 874
BmsI GCATC 6 cut(s) 139, 176, 246, 925, 942, 1220
BmtI GCTAGC 1 cut(s) 1341
BmuI ACTGGG 3 cut(s) 230, 398, 874
Bpu10I CCTNAGC 3 cut(s) 183, 663, 1183
BpuEI CTTGAG 2 cut(s) 22, 1072
BpuMI CCSGG 2 cut(s) 919, 940
BsaBI GATNNNNATC 1 cut(s) 1210
BsaHI GRCGYC 1 cut(s) 714
BsaI GGTCTC 1 cut(s) 1149
BsaJI CCNNGG 2 cut(s) 917, 939
BsaXI ACNNNNNCTCC 2 cut(s) 197, 227
Bsc4I CCNNNNNNNGG 2 cut(s) 664, 1118
Bse1I ACTGG 8 cut(s) 225, 393, 404, 715, 869, 964, 1396, 1427
Bse3DI GCAATG 2 cut(s) 636, 780
Bse8I GATNNNNATC 1 cut(s) 1210
BseBI CCWGG 3 cut(s) 154, 659, 1066
BseDI CCNNGG 2 cut(s) 917, 939
BseGI GGATG 2 cut(s) 1173, 1275
BseJI GATNNNNATC 1 cut(s) 1210
BseLI CCNNNNNNNGG 2 cut(s) 664, 1118
BseMI GCAATG 2 cut(s) 636, 780
BseMII CTCAG 6 cut(s) 23, 197, 654, 800, 1146, 1428
BseNI ACTGG 8 cut(s) 225, 393, 404, 715, 869, 964, 1396, 1427
BseRI GAGGAG 2 cut(s) 38, 875
BseSI GKGCMC 1 cut(s) 1403
BseXI GCAGC 1 cut(s) 653
BsgI GTGCAG 1 cut(s) 412
Bsh1236I CGCG 1 cut(s) 933
BshFI GGCC 6 cut(s) 29, 419, 657, 744, 869, 1100
BshNI GGYRCC 1 cut(s) 713
BsiHKCI CYCGRG 2 cut(s) 679, 1255
BsiSI CCGG 2 cut(s) 919, 939
BslFI GGGAC 3 cut(s) 696, 890, 1107
BslI CCNNNNNNNGG 2 cut(s) 664, 1118
BsmAI GTCTC 3 cut(s) 40, 1149, 1417
BsmFI GGGAC 3 cut(s) 696, 890, 1107
BsmI GAATGC 2 cut(s) 1032, 1231
BsnI GGCC 6 cut(s) 29, 419, 657, 744, 869, 1100
Bso31I GGTCTC 1 cut(s) 1149
BsoBI CYCGRG 2 cut(s) 679, 1255
Bsp1286I GDGCHC 2 cut(s) 1060, 1403
Bsp143I GATC 5 cut(s) 55, 91, 288, 446, 1205
BspACI CCGC 3 cut(s) 741, 1179, 1229
BspANI GGCC 6 cut(s) 29, 419, 657, 744, 869, 1100
BspCNI CTCAG 6 cut(s) 22, 196, 655, 799, 1145, 1427
BspFNI CGCG 1 cut(s) 933
BspHI TCATGA 1 cut(s) 61
BspLI GGNNCC 6 cut(s) 139, 393, 684, 715, 878, 1123
BspOI GCTAGC 1 cut(s) 1341
BspPI GGATC 1 cut(s) 454
BspT107I GGYRCC 1 cut(s) 713
BspTNI GGTCTC 1 cut(s) 1149
BsrDI GCAATG 2 cut(s) 636, 780
BsrI ACTGG 8 cut(s) 225, 393, 404, 715, 869, 964, 1396, 1427
BssECI CCNNGG 2 cut(s) 917, 939
BssMI GATC 5 cut(s) 55, 91, 288, 446, 1205
BssNI GRCGYC 1 cut(s) 714
Bst2UI CCWGG 3 cut(s) 154, 659, 1066
Bst4CI ACNGT 4 cut(s) 363, 553, 757, 1165
BstACI GRCGYC 1 cut(s) 714
BstC8I GCNNGC 5 cut(s) 227, 475, 538, 771, 1339
BstDEI CTNAG 7 cut(s) 9, 183, 663, 786, 1132, 1183, 1414
BstEII GGTNACC 1 cut(s) 943
BstF5I GGATG 2 cut(s) 1173, 1275
BstFNI CGCG 1 cut(s) 933
BstH2I RGCGCY 1 cut(s) 717
BstHHI GCGC 2 cut(s) 716, 933
BstKTI GATC 5 cut(s) 58, 94, 291, 449, 1208
BstMAI GTCTC 3 cut(s) 40, 1149, 1417
BstMBI GATC 5 cut(s) 55, 91, 288, 446, 1205
BstMWI GCNNNNNNNGC 5 cut(s) 26, 117, 199, 542, 1398
BstNI CCWGG 3 cut(s) 154, 659, 1066
BstNSI RCATGY 2 cut(s) 229, 773
BstPI GGTNACC 1 cut(s) 943
BstSCI CCNGG 5 cut(s) 152, 657, 917, 938, 1064
BstSFI CTRYAG 1 cut(s) 577
BstSLI GKGCMC 1 cut(s) 1403
BstUI CGCG 1 cut(s) 933
BstV1I GCAGC 1 cut(s) 653
BstX2I RGATCY 2 cut(s) 446, 1205
BstYI RGATCY 2 cut(s) 446, 1205
BsuRI GGCC 6 cut(s) 29, 419, 657, 744, 869, 1100
BtgZI GCGATG 1 cut(s) 948
BtsCI GGATG 2 cut(s) 1173, 1275
BtsI GCAGTG 1 cut(s) 618
BtsIMutI CAGTG 7 cut(s) 368, 549, 618, 708, 753, 1161, 1403
Cac8I GCNNGC 5 cut(s) 227, 475, 538, 771, 1339
CaiI CAGNNNCTG 2 cut(s) 190, 585
CciI TCATGA 1 cut(s) 61
CfoI GCGC 2 cut(s) 716, 933
Cfr13I GGNCC 6 cut(s) 86, 392, 683, 867, 877, 1121
Csp6I GTAC 5 cut(s) 310, 523, 862, 990, 1430
CviQI GTAC 5 cut(s) 310, 523, 862, 990, 1430
DdeI CTNAG 7 cut(s) 9, 183, 663, 786, 1132, 1183, 1414
DinI GGCGCC 1 cut(s) 715
DpnI GATC 5 cut(s) 57, 93, 290, 448, 1207
DpnII GATC 5 cut(s) 55, 91, 288, 446, 1205
EaeI YGGCCR 3 cut(s) 655, 742, 1098
Eco24I GRGCYC 1 cut(s) 1060
Eco31I GGTCTC 1 cut(s) 1149
Eco47I GGWCC 5 cut(s) 86, 392, 683, 877, 1121
Eco88I CYCGRG 2 cut(s) 679, 1255
Eco91I GGTNACC 1 cut(s) 943
EcoO65I GGTNACC 1 cut(s) 943
EcoRII CCWGG 3 cut(s) 152, 657, 1064
EcoT22I ATGCAT 2 cut(s) 771, 1032
EcoT38I GRGCYC 1 cut(s) 1060
EgeI GGCGCC 1 cut(s) 715
EheI GGCGCC 1 cut(s) 715
FaqI GGGAC 3 cut(s) 696, 890, 1107
FauI CCCGC 1 cut(s) 1186
FauNDI CATATG 2 cut(s) 1046, 1191
FbaI TGATCA 2 cut(s) 55, 288
FblI GTMKAC 1 cut(s) 1167
Fnu4HI GCNGC 3 cut(s) 642, 742, 1230
FokI GGATG 2 cut(s) 1160, 1282
FriOI GRGCYC 1 cut(s) 1060
Fsp4HI GCNGC 3 cut(s) 642, 742, 1230
FspBI CTAG 1 cut(s) 1338
GlaI GCGC 2 cut(s) 715, 932
GluI GCNGC 3 cut(s) 642, 742, 1230
HaeII RGCGCY 1 cut(s) 717
HaeIII GGCC 6 cut(s) 29, 419, 657, 744, 869, 1100
HapII CCGG 2 cut(s) 919, 939
HhaI GCGC 2 cut(s) 716, 933
Hin1I GRCGYC 1 cut(s) 714
Hin6I GCGC 2 cut(s) 714, 931
HinP1I GCGC 2 cut(s) 714, 931
HincII GTYRAC 1 cut(s) 1366
HindII GTYRAC 1 cut(s) 1366
HindIII AAGCTT 3 cut(s) 40, 118, 1238
HinfI GANTC 2 cut(s) 582, 1323
HpaII CCGG 2 cut(s) 919, 939
HphI GGTGA 6 cut(s) 829, 937, 953, 1090, 1165, 1291
Hpy166II GTNNAC 5 cut(s) 386, 862, 1168, 1282, 1366
Hpy188I TCNGA 7 cut(s) 12, 288, 533, 789, 1205, 1224, 1322
Hpy188III TCNNGA 5 cut(s) 62, 346, 503, 681, 1255
Hpy8I GTNNAC 5 cut(s) 386, 862, 1168, 1282, 1366
HpyAV CCTTC 6 cut(s) 77, 430, 446, 851, 923, 1123
HpyCH4III ACNGT 4 cut(s) 363, 553, 757, 1165
HpyCH4IV ACGT 2 cut(s) 303, 521
HpyF10VI GCNNNNNNNGC 5 cut(s) 26, 117, 199, 542, 1398
HpyF3I CTNAG 7 cut(s) 9, 183, 663, 786, 1132, 1183, 1414
HpySE526I ACGT 2 cut(s) 303, 521
Hsp92I GRCGYC 1 cut(s) 714
HspAI GCGC 2 cut(s) 714, 931
KasI GGCGCC 1 cut(s) 713
Ksp22I TGATCA 2 cut(s) 55, 288
Kzo9I GATC 5 cut(s) 55, 91, 288, 446, 1205
LmnI GCTCC 2 cut(s) 143, 533
Lsp1109I GCAGC 1 cut(s) 653
LweI GCATC 6 cut(s) 139, 176, 246, 925, 942, 1220
MaeI CTAG 1 cut(s) 1338
MaeII ACGT 2 cut(s) 303, 521
MaeIII GTNAC 3 cut(s) 670, 751, 943
MalI GATC 5 cut(s) 57, 93, 290, 448, 1207
MboI GATC 5 cut(s) 55, 91, 288, 446, 1205
MboII GAAGA 2 cut(s) 89, 92
MflI RGATCY 2 cut(s) 446, 1205
MhlI GDGCHC 2 cut(s) 1060, 1403
MlsI TGGCCA 2 cut(s) 657, 1100
MluCI AATT 3 cut(s) 249, 762, 1086
MluNI TGGCCA 2 cut(s) 657, 1100
Mly113I GGCGCC 1 cut(s) 714
MmeI TCCRAC 2 cut(s) 391, 481
Mox20I TGGCCA 2 cut(s) 657, 1100
Mph1103I ATGCAT 2 cut(s) 771, 1032
MscI TGGCCA 2 cut(s) 657, 1100
MseI TTAA 2 cut(s) 795, 1128
MslI CAYNNNNRTG 4 cut(s) 63, 551, 950, 1025
Msp20I TGGCCA 2 cut(s) 657, 1100
MspA1I CMGCKG 1 cut(s) 1136
MspI CCGG 2 cut(s) 919, 939
MspR9I CCNGG 5 cut(s) 154, 659, 919, 940, 1066
Mva1269I GAATGC 2 cut(s) 1032, 1231
MvaI CCWGG 3 cut(s) 154, 659, 1066
MvnI CGCG 1 cut(s) 933
MwoI GCNNNNNNNGC 5 cut(s) 26, 117, 199, 542, 1398
NarI GGCGCC 1 cut(s) 714
NciI CCSGG 2 cut(s) 919, 940
NdeI CATATG 2 cut(s) 1046, 1191
NdeII GATC 5 cut(s) 55, 91, 288, 446, 1205
NheI GCTAGC 1 cut(s) 1337
NlaIV GGNNCC 6 cut(s) 139, 393, 684, 715, 878, 1123
NmuCI GTSAC 2 cut(s) 751, 943
NsiI ATGCAT 2 cut(s) 771, 1032
NspI RCATGY 2 cut(s) 229, 773
OliI CACNNNNGTG 1 cut(s) 551
PaeI GCATGC 2 cut(s) 229, 773
PagI TCATGA 1 cut(s) 61
PctI GAATGC 2 cut(s) 1032, 1231
PfeI GAWTC 2 cut(s) 582, 1323
PkrI GCNGC 3 cut(s) 643, 743, 1231
PluTI GGCGCC 1 cut(s) 717
Psp6I CCWGG 3 cut(s) 152, 657, 1064
PspEI GGTNACC 1 cut(s) 943
PspGI CCWGG 3 cut(s) 152, 657, 1064
PspN4I GGNNCC 6 cut(s) 139, 393, 684, 715, 878, 1123
PspPI GGNCC 6 cut(s) 86, 392, 683, 867, 877, 1121
PstNI CAGNNNCTG 2 cut(s) 190, 585
PsuI RGATCY 2 cut(s) 446, 1205
PvuII CAGCTG 1 cut(s) 1136
RsaI GTAC 5 cut(s) 311, 524, 863, 991, 1431
RsaNI GTAC 5 cut(s) 310, 523, 862, 990, 1430
RseI CAYNNNNRTG 4 cut(s) 63, 551, 950, 1025
SaqAI TTAA 2 cut(s) 795, 1128
SatI GCNGC 3 cut(s) 642, 742, 1230
Sau3AI GATC 5 cut(s) 55, 91, 288, 446, 1205
Sau96I GGNCC 6 cut(s) 86, 392, 683, 867, 877, 1121
ScrFI CCNGG 5 cut(s) 154, 659, 919, 940, 1066
SduI GDGCHC 2 cut(s) 1060, 1403
SfaNI GCATC 6 cut(s) 139, 176, 246, 925, 942, 1220
SfcI CTRYAG 1 cut(s) 577
SfoI GGCGCC 1 cut(s) 715
SinI GGWCC 5 cut(s) 86, 392, 683, 877, 1121
SmiMI CAYNNNNRTG 4 cut(s) 63, 551, 950, 1025
SmlI CTYRAG 2 cut(s) 37, 1051
SmoI CTYRAG 2 cut(s) 37, 1051
SphI GCATGC 2 cut(s) 229, 773
Sse9I AATT 3 cut(s) 249, 762, 1086
SsiI CCGC 3 cut(s) 741, 1179, 1229
SspDI GGCGCC 1 cut(s) 713
SspMI CTAG 1 cut(s) 1338
StyD4I CCNGG 5 cut(s) 152, 657, 917, 938, 1064
TaaI ACNGT 4 cut(s) 363, 553, 757, 1165
TaiI ACGT 2 cut(s) 306, 524
TaqI TCGA 1 cut(s) 319
TasI AATT 3 cut(s) 249, 762, 1086
TatI WGTACW 2 cut(s) 861, 1429
TauI GCSGC 2 cut(s) 744, 1232
TfiI GAWTC 2 cut(s) 582, 1323
Tru1I TTAA 2 cut(s) 795, 1128
Tru9I TTAA 2 cut(s) 795, 1128
TscAI CASTG 7 cut(s) 368, 556, 625, 715, 760, 1168, 1403
TseFI GTSAC 2 cut(s) 751, 943
TseI GCWGC 1 cut(s) 641
Tsp45I GTSAC 2 cut(s) 751, 943
TspDTI ATGAA 4 cut(s) 547, 641, 1297, 1342
TspGWI ACGGA 1 cut(s) 130
TspRI CASTG 7 cut(s) 368, 556, 625, 715, 760, 1168, 1403
VpaK11BI GGWCC 5 cut(s) 86, 392, 683, 877, 1121
XapI RAATTY 1 cut(s) 249
XceI RCATGY 2 cut(s) 229, 773
XcmI CCANNNNNNNNNTGG 2 cut(s) 254, 1072
XmiI GTMKAC 1 cut(s) 1167
XspI CTAG 1 cut(s) 1338
Zsp2I ATGCAT 2 cut(s) 771, 1032
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.