MD12G1162400.v1.1

Auxin transporter-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
OG0001953
Physical Location & Seq
Forward (+)
24390830 .. 24396467
5638 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1162400.v1.1.491

Sequence Viewer

Length: 1443 bp
ATGTTGGCTCAGAAGCAAGCAGAGGAAGCAATAGTCTCCAATGACCATGAAGGAAAAGAAGATCATCCCCAAGAAAACGATGAGGAAAACACCTCCATGTTTAATGTCAAGAACTTCCTCTGGCATGGAGGCTCCGTTTGGGACGCCTGGTTCAGCTGCGCTTCCAATCAAGTGGCGCAAGTGCTTTTGACACTGCCGTATTCGTTCTCCCAGCTGGGGTTTCTATCCGGCATCTTGCTGCAGCTATTCTACGGAATCCTCGGAAGCTGGACGGCTTATCTGATCAGTGTGCTGTACATGGAATACAGAACCCGGAAGGGAAAAGAGAACGTTAACTTCAAGAACCACGTTATTCAGTGGTTTGAAGTTCTTGATGGGTTGCTTGGCCCCTACTGGAAAGCCGTGGGGCTTGCTTTCAACTGCACTTTCCTCCTCTTTGGATCTGTCATCCAGCTAATTGCTTGTGCAAGTAACATATATTACATAAATGACCATTTGGACAAGAGGACGTGGACCTACATCTTCGGAGCTTGCTGTGCCACCACAGTTTTCATACCTTCTTTCCATAACTATCGGATTTGGTCTTTTCTCGGACTTGGAATGACCACTTACACGGCCTGGTACTTGACCATTGCAGCTGTTGTCCATGGCCAGGTTGAAGGTGTGACACACACAGCTCCCACAAAGCTAGTGCTGTATTTCACCGGAGCCACCAACATACTATACACGTTCGGTGGCCATGCTGTTACTGTGGAAATTATGCATGCCATGTGGAAGCCACAGAAATTCAAGTCCATTTACTTGTATGCCACACTCTACGTTTTCACACTAACACTTCCTTCTGCTACCTCTGTCTACTGGGCCTTTGGTGATGAGCTCCTTAACCATTCCAACGCCTTCTCTCTCCTCCCCAAAAACGGCTGGCGTGACGCCGCCGTTATACTTATGCTCATCCACCAGTTTATAACATTTGGGTTTGCATGTACACCACTGTACTTTGTGTGGGAGAAGGTGATTGGCATGCATGACACAAAGAGCATTTGCTTGAGGGCACTTGCTAGGCTTCCAGTTGTGATCCCAATTTGGTTCTTGGCTATAATCTTCCCCTTCTTTGGGCCCATAAACTCTGCAGTTGGGGCTCTCTTGGTTAGCTTCACCGTCTACATCATCCCATCTTTAGCTCATATGCTCACCTACAGAAAAGCTTCTGCCAGACAGAATGCTGCAGAGAAGCCACCTTTCTTTTTACGAAGCTGGACTGCCATGTACGTGATCAACTCCTTCATGGTGGTGTGGGTTCTGGTGATTGGGTTCGGGTTCGGTGGCTGGGCCAGCGTGACCAACTTTGTGAGACAAGTCGACACATTTGGGCTGTTTGCCAAGTGCTATCAGTGCCACCCTCCAAAACCACCACTAGCAGCCGCAGCTCCTCCCCATTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001736 GO:0001738 GO:0002009 GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0005794 GO:0005886 GO:0006355 GO:0006810 GO:0006811 GO:0006820 GO:0006865 GO:0007164 GO:0007275 GO:0008150 GO:0008509 GO:0008514 GO:0009605 GO:0009606 GO:0009607 GO:0009624 GO:0009628 GO:0009629 GO:0009630 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009914 GO:0009926 GO:0009958 GO:0009986 GO:0009987 GO:0010011 GO:0010015 GO:0010053 GO:0010054 GO:0010101 GO:0010102 GO:0010311 GO:0010328 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010817 GO:0012505 GO:0015075 GO:0015171 GO:0015318 GO:0015711 GO:0015849 GO:0016020 GO:0019219 GO:0019222 GO:0021700 GO:0022603 GO:0022622 GO:0022857 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0034220 GO:0042562 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045893 GO:0045935 GO:0046942 GO:0046943 GO:0048364 GO:0048468 GO:0048469 GO:0048518 GO:0048522 GO:0048527 GO:0048528 GO:0048646 GO:0048729 GO:0048731 GO:0048764 GO:0048765 GO:0048829 GO:0048831 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051239 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0055085 GO:0060255 GO:0060429 GO:0060688 GO:0060918 GO:0060919 GO:0065007 GO:0065008 GO:0071695 GO:0071702 GO:0071705 GO:0071944 GO:0080090 GO:0080161 GO:0090558 GO:0090627 GO:0090696 GO:0090697 GO:0090698 GO:0097708 GO:0098656 GO:0099402 GO:1900618 GO:1902680 GO:1903506 GO:1903508 GO:1903825 GO:1905039 GO:1905392 GO:1905393 GO:1905428 GO:2000026 GO:2000032 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
Aa_trans

Protein Analysis

481

Amino Acids

54.27

Weight (kDa)

8.44

Isoelectric Point (pI)

30.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aa_trans PF01490 42 - 435 7.6e-88 Transmembrane amino acid transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 965
AccI GTMKAC 3 cut(s) 855, 1161, 1359
AciI CCGC 2 cut(s) 933, 1422
AclI AACGTT 1 cut(s) 330
AclWI GGATC 2 cut(s) 448, 1069
AcoI YGGCCR 2 cut(s) 649, 736
AcsI RAATTY 1 cut(s) 785
AcyI GRCGYC 2 cut(s) 144, 930
AfaI GTAC 5 cut(s) 296, 623, 985, 995, 1268
AfiI CCNNNNNNNGG 5 cut(s) 216, 652, 917, 1112, 1113
AflIII ACRYGT 1 cut(s) 726
AgsI TTSAA 5 cut(s) 340, 365, 418, 659, 790
AjiI CACGTC 1 cut(s) 510
AjnI CCWGG 3 cut(s) 146, 617, 651
AloI GAACNNNNNNTCC 2 cut(s) 134, 166
Alw21I GWGCWC 1 cut(s) 879
Alw26I GTCTC 2 cut(s) 40, 1345
AlwI GGATC 2 cut(s) 448, 1069
AoxI GGCC 7 cut(s) 385, 615, 649, 736, 861, 1115, 1329
ApaI GGGCCC 1 cut(s) 1119
ApeKI GCWGC 7 cut(s) 156, 238, 241, 635, 1223, 1418, 1424
ApoI RAATTY 1 cut(s) 785
Asp700I GAANNNNTTC 1 cut(s) 1204
AspLEI GCGC 2 cut(s) 161, 178
AspS9I GGNCC 6 cut(s) 386, 513, 861, 1115, 1116, 1329
AsuC2I CCSGG 1 cut(s) 313
AsuHPI GGTGA 6 cut(s) 694, 881, 1024, 1147, 1183, 1315
AvaII GGWCC 1 cut(s) 513
BaeGI GKGCMC 2 cut(s) 1054, 1119
BalI TGGCCA 2 cut(s) 651, 738
BanII GRGCYC 3 cut(s) 879, 1119, 1141
Bbv12I GWGCWC 1 cut(s) 879
BbvI GCAGC 7 cut(s) 143, 225, 253, 647, 1210, 1430, 1436
BccI CCATC 2 cut(s) 368, 1180
BceAI ACGGC 6 cut(s) 181, 288, 386, 630, 920, 934
BciT130I CCWGG 3 cut(s) 148, 619, 653
BclI TGATCA 2 cut(s) 282, 1272
BcnI CCSGG 1 cut(s) 313
BcoDI GTCTC 2 cut(s) 40, 1345
BfaI CTAG 3 cut(s) 689, 1059, 1415
BfmI CTRYAG 4 cut(s) 239, 1128, 1195, 1224
BisI GCNGC 9 cut(s) 157, 239, 242, 636, 933, 1224, 1419, 1422, 1425
BlsI GCNGC 9 cut(s) 158, 240, 243, 637, 934, 1225, 1420, 1423, 1426
Bme1390I CCNGG 4 cut(s) 148, 313, 619, 653
Bme18I GGWCC 1 cut(s) 513
BmgBI CACGTC 1 cut(s) 510
BmgT120I GGNCC 6 cut(s) 386, 513, 861, 1115, 1116, 1329
BmiI GGNNCC 4 cut(s) 133, 388, 709, 1117
BmrFI CCNGG 4 cut(s) 148, 313, 619, 653
BmrI ACTGGG 1 cut(s) 868
BmsI GCATC 1 cut(s) 240
BmuI ACTGGG 1 cut(s) 868
BpuEI CTTGAG 1 cut(s) 1066
BpuMI CCSGG 1 cut(s) 313
BsaAI YACGTR 1 cut(s) 1270
BsaHI GRCGYC 2 cut(s) 144, 930
BsaJI CCNNGG 3 cut(s) 259, 402, 646
BsaWI WCCGGW 1 cut(s) 704
BsaXI ACNNNNNCTCC 2 cut(s) 120, 150
Bsc4I CCNNNNNNNGG 5 cut(s) 216, 652, 917, 1112, 1113
Bse1I ACTGG 4 cut(s) 398, 863, 958, 1067
Bse3DI GCAATG 1 cut(s) 630
BseBI CCWGG 3 cut(s) 148, 619, 653
BseDI CCNNGG 3 cut(s) 259, 402, 646
BseGI GGATG 4 cut(s) 64, 447, 951, 1167
BseLI CCNNNNNNNGG 5 cut(s) 216, 652, 917, 1112, 1113
BseMI GCAATG 1 cut(s) 630
BseMII CTCAG 1 cut(s) 23
BseNI ACTGG 4 cut(s) 398, 863, 958, 1067
BseRI GAGGAG 3 cut(s) 422, 896, 1419
BseSI GKGCMC 2 cut(s) 1054, 1119
BseXI GCAGC 7 cut(s) 143, 225, 253, 647, 1210, 1430, 1436
BseYI CCCAGC 3 cut(s) 210, 214, 1326
BsgI GTGCAG 1 cut(s) 406
BshFI GGCC 7 cut(s) 387, 617, 651, 738, 863, 1117, 1331
BsiHKAI GWGCWC 1 cut(s) 879
BsiSI CCGG 3 cut(s) 228, 313, 705
BslFI GGGAC 1 cut(s) 155
BslI CCNNNNNNNGG 5 cut(s) 216, 652, 917, 1112, 1113
BsmAI GTCTC 2 cut(s) 40, 1345
BsmFI GGGAC 1 cut(s) 155
BsmI GAATGC 1 cut(s) 1225
BsnI GGCC 7 cut(s) 387, 617, 651, 738, 863, 1117, 1331
Bsp120I GGGCCC 1 cut(s) 1115
Bsp1286I GDGCHC 4 cut(s) 879, 1054, 1119, 1141
Bsp1407I TGTACA 2 cut(s) 294, 983
Bsp143I GATC 5 cut(s) 61, 282, 440, 1074, 1272
Bsp19I CCATGG 1 cut(s) 646
BspACI CCGC 2 cut(s) 933, 1422
BspANI GGCC 7 cut(s) 387, 617, 651, 738, 863, 1117, 1331
BspCNI CTCAG 1 cut(s) 22
BspLI GGNNCC 4 cut(s) 133, 388, 709, 1117
BspMAI CTGCAG 3 cut(s) 243, 1132, 1228
BspPI GGATC 2 cut(s) 448, 1069
BsrDI GCAATG 1 cut(s) 630
BsrGI TGTACA 2 cut(s) 294, 983
BsrI ACTGG 4 cut(s) 398, 863, 958, 1067
BssECI CCNNGG 3 cut(s) 259, 402, 646
BssMI GATC 5 cut(s) 61, 282, 440, 1074, 1272
BssNI GRCGYC 2 cut(s) 144, 930
BssT1I CCWWGG 1 cut(s) 646
Bst2UI CCWGG 3 cut(s) 148, 619, 653
Bst4CI ACNGT 4 cut(s) 547, 751, 993, 1159
BstACI GRCGYC 2 cut(s) 144, 930
BstAUI TGTACA 2 cut(s) 294, 983
BstBAI YACGTR 1 cut(s) 1270
BstC8I GCNNGC 7 cut(s) 18, 411, 532, 765, 923, 1022, 1333
BstDEI CTNAG 1 cut(s) 9
BstDSI CCRYGG 2 cut(s) 402, 646
BstF5I GGATG 4 cut(s) 64, 447, 951, 1167
BstHHI GCGC 2 cut(s) 161, 178
BstKTI GATC 5 cut(s) 64, 285, 443, 1077, 1275
BstMAI GTCTC 2 cut(s) 40, 1345
BstMBI GATC 5 cut(s) 61, 282, 440, 1074, 1272
BstMWI GCNNNNNNNGC 6 cut(s) 26, 536, 1136, 1332, 1392, 1424
BstNI CCWGG 3 cut(s) 148, 619, 653
BstNSI RCATGY 3 cut(s) 767, 984, 1024
BstSCI CCNGG 4 cut(s) 146, 311, 617, 651
BstSFI CTRYAG 4 cut(s) 239, 1128, 1195, 1224
BstSLI GKGCMC 2 cut(s) 1054, 1119
BstV1I GCAGC 7 cut(s) 143, 225, 253, 647, 1210, 1430, 1436
BstX2I RGATCY 1 cut(s) 440
BstXI CCANNNNNNTGG 1 cut(s) 172
BstYI RGATCY 1 cut(s) 440
BsuRI GGCC 7 cut(s) 387, 617, 651, 738, 863, 1117, 1331
BtgI CCRYGG 2 cut(s) 402, 646
BtrI CACGTC 1 cut(s) 510
BtsCI GGATG 4 cut(s) 64, 447, 951, 1167
BtsI GCAGTG 1 cut(s) 191
BtsIMutI CAGTG 5 cut(s) 191, 292, 362, 989, 1397
Cac8I GCNNGC 7 cut(s) 18, 411, 532, 765, 923, 1022, 1333
CfoI GCGC 2 cut(s) 161, 178
Cfr13I GGNCC 6 cut(s) 386, 513, 861, 1115, 1116, 1329
CseI GACGC 2 cut(s) 152, 938
Csp6I GTAC 5 cut(s) 295, 622, 984, 994, 1267
CviQI GTAC 5 cut(s) 295, 622, 984, 994, 1267
DdeI CTNAG 1 cut(s) 9
DpnI GATC 5 cut(s) 63, 284, 442, 1076, 1274
DpnII GATC 5 cut(s) 61, 282, 440, 1074, 1272
EaeI YGGCCR 2 cut(s) 649, 736
Ecl136II GAGCTC 1 cut(s) 877
Eco130I CCWWGG 1 cut(s) 646
Eco24I GRGCYC 3 cut(s) 879, 1119, 1141
Eco47I GGWCC 1 cut(s) 513
Eco53kI GAGCTC 1 cut(s) 877
EcoICRI GAGCTC 1 cut(s) 877
EcoRII CCWGG 3 cut(s) 146, 617, 651
EcoT14I CCWWGG 1 cut(s) 646
EcoT22I ATGCAT 2 cut(s) 765, 1026
EcoT38I GRGCYC 3 cut(s) 879, 1119, 1141
ErhI CCWWGG 1 cut(s) 646
FaqI GGGAC 1 cut(s) 155
FauNDI CATATG 1 cut(s) 1185
FbaI TGATCA 2 cut(s) 282, 1272
FblI GTMKAC 3 cut(s) 855, 1161, 1359
Fnu4HI GCNGC 9 cut(s) 157, 239, 242, 636, 933, 1224, 1419, 1422, 1425
FokI GGATG 4 cut(s) 51, 434, 938, 1154
FriOI GRGCYC 3 cut(s) 879, 1119, 1141
Fsp4HI GCNGC 9 cut(s) 157, 239, 242, 636, 933, 1224, 1419, 1422, 1425
FspBI CTAG 3 cut(s) 689, 1059, 1415
GlaI GCGC 2 cut(s) 160, 177
GluI GCNGC 9 cut(s) 157, 239, 242, 636, 933, 1224, 1419, 1422, 1425
GsaI CCCAGC 3 cut(s) 214, 218, 1330
HaeIII GGCC 7 cut(s) 387, 617, 651, 738, 863, 1117, 1331
HapII CCGG 3 cut(s) 228, 313, 705
HgaI GACGC 2 cut(s) 152, 938
HhaI GCGC 2 cut(s) 161, 178
Hin1I GRCGYC 2 cut(s) 144, 930
Hin6I GCGC 2 cut(s) 159, 176
HinP1I GCGC 2 cut(s) 159, 176
HincII GTYRAC 2 cut(s) 334, 1360
HindII GTYRAC 2 cut(s) 334, 1360
HindIII AAGCTT 1 cut(s) 1203
HinfI GANTC 1 cut(s) 255
HpaI GTTAAC 1 cut(s) 334
HpaII CCGG 3 cut(s) 228, 313, 705
HphI GGTGA 6 cut(s) 694, 881, 1024, 1147, 1183, 1315
Hpy166II GTNNAC 6 cut(s) 334, 513, 856, 986, 1162, 1360
Hpy188I TCNGA 6 cut(s) 12, 263, 282, 527, 576, 593
Hpy188III TCNNGA 3 cut(s) 109, 340, 371
Hpy8I GTNNAC 6 cut(s) 334, 513, 856, 986, 1162, 1360
HpyAV CCTTC 9 cut(s) 44, 310, 567, 653, 849, 907, 1003, 1117, 1291
HpyCH4III ACNGT 4 cut(s) 547, 751, 993, 1159
HpyCH4IV ACGT 6 cut(s) 330, 348, 509, 728, 819, 1269
HpyCH4V TGCA 9 cut(s) 241, 423, 467, 635, 763, 980, 1024, 1130, 1226
HpyF10VI GCNNNNNNNGC 6 cut(s) 26, 536, 1136, 1332, 1392, 1424
HpyF3I CTNAG 1 cut(s) 9
HpySE526I ACGT 6 cut(s) 330, 348, 509, 728, 819, 1269
Hsp92I GRCGYC 2 cut(s) 144, 930
HspAI GCGC 2 cut(s) 159, 176
Ksp22I TGATCA 2 cut(s) 282, 1272
KspAI GTTAAC 1 cut(s) 334
Kzo9I GATC 5 cut(s) 61, 282, 440, 1074, 1272
LmnI GCTCC 6 cut(s) 137, 527, 682, 707, 882, 1432
Lsp1109I GCAGC 7 cut(s) 143, 225, 253, 647, 1210, 1430, 1436
LweI GCATC 1 cut(s) 240
MaeI CTAG 3 cut(s) 689, 1059, 1415
MaeII ACGT 6 cut(s) 330, 348, 509, 728, 819, 1269
MaeIII GTNAC 5 cut(s) 470, 664, 745, 926, 1336
MalI GATC 5 cut(s) 63, 284, 442, 1076, 1274
MboI GATC 5 cut(s) 61, 282, 440, 1074, 1272
MboII GAAGA 3 cut(s) 71, 514, 1093
MflI RGATCY 1 cut(s) 440
MhlI GDGCHC 4 cut(s) 879, 1054, 1119, 1141
MlsI TGGCCA 2 cut(s) 651, 738
MluCI AATT 4 cut(s) 456, 756, 785, 1080
MluNI TGGCCA 2 cut(s) 651, 738
MmeI TCCRAC 1 cut(s) 915
Mox20I TGGCCA 2 cut(s) 651, 738
Mph1103I ATGCAT 2 cut(s) 765, 1026
MroXI GAANNNNTTC 1 cut(s) 1204
MscI TGGCCA 2 cut(s) 651, 738
MseI TTAA 3 cut(s) 102, 333, 882
MslI CAYNNNNRTG 3 cut(s) 95, 1268, 1289
Msp20I TGGCCA 2 cut(s) 651, 738
MspA1I CMGCKG 3 cut(s) 156, 214, 638
MspI CCGG 3 cut(s) 228, 313, 705
MspR9I CCNGG 4 cut(s) 148, 313, 619, 653
Mva1269I GAATGC 1 cut(s) 1225
MvaI CCWGG 3 cut(s) 148, 619, 653
MwoI GCNNNNNNNGC 6 cut(s) 26, 536, 1136, 1332, 1392, 1424
NciI CCSGG 1 cut(s) 313
NcoI CCATGG 1 cut(s) 646
NdeI CATATG 1 cut(s) 1185
NdeII GATC 5 cut(s) 61, 282, 440, 1074, 1272
NlaIV GGNNCC 4 cut(s) 133, 388, 709, 1117
NmuCI GTSAC 3 cut(s) 664, 926, 1336
NsiI ATGCAT 2 cut(s) 765, 1026
NspI RCATGY 3 cut(s) 767, 984, 1024
PaeI GCATGC 2 cut(s) 767, 1024
PctI GAATGC 1 cut(s) 1225
PdmI GAANNNNTTC 1 cut(s) 1204
PfeI GAWTC 1 cut(s) 255
PkrI GCNGC 9 cut(s) 158, 240, 243, 637, 934, 1225, 1420, 1423, 1426
Ppu21I YACGTR 1 cut(s) 1270
PsiI TTATAA 1 cut(s) 965
Psp124BI GAGCTC 1 cut(s) 879
Psp1406I AACGTT 1 cut(s) 330
Psp6I CCWGG 3 cut(s) 146, 617, 651
PspFI CCCAGC 3 cut(s) 210, 214, 1326
PspGI CCWGG 3 cut(s) 146, 617, 651
PspN4I GGNNCC 4 cut(s) 133, 388, 709, 1117
PspOMI GGGCCC 1 cut(s) 1115
PspPI GGNCC 6 cut(s) 386, 513, 861, 1115, 1116, 1329
PstI CTGCAG 3 cut(s) 243, 1132, 1228
PsuI RGATCY 1 cut(s) 440
PvuII CAGCTG 3 cut(s) 156, 214, 638
RsaI GTAC 5 cut(s) 296, 623, 985, 995, 1268
RsaNI GTAC 5 cut(s) 295, 622, 984, 994, 1267
RseI CAYNNNNRTG 3 cut(s) 95, 1268, 1289
SacI GAGCTC 1 cut(s) 879
SalI GTCGAC 1 cut(s) 1358
SaqAI TTAA 3 cut(s) 102, 333, 882
SatI GCNGC 9 cut(s) 157, 239, 242, 636, 933, 1224, 1419, 1422, 1425
Sau3AI GATC 5 cut(s) 61, 282, 440, 1074, 1272
Sau96I GGNCC 6 cut(s) 386, 513, 861, 1115, 1116, 1329
ScrFI CCNGG 4 cut(s) 148, 313, 619, 653
SduI GDGCHC 4 cut(s) 879, 1054, 1119, 1141
SfaNI GCATC 1 cut(s) 240
SfcI CTRYAG 4 cut(s) 239, 1128, 1195, 1224
SinI GGWCC 1 cut(s) 513
SmiMI CAYNNNNRTG 3 cut(s) 95, 1268, 1289
SmlI CTYRAG 1 cut(s) 1045
SmoI CTYRAG 1 cut(s) 1045
SphI GCATGC 2 cut(s) 767, 1024
Sse9I AATT 4 cut(s) 456, 756, 785, 1080
SsiI CCGC 2 cut(s) 933, 1422
SspMI CTAG 3 cut(s) 689, 1059, 1415
SstI GAGCTC 1 cut(s) 879
StyD4I CCNGG 4 cut(s) 146, 311, 617, 651
StyI CCWWGG 1 cut(s) 646
TaaI ACNGT 4 cut(s) 547, 751, 993, 1159
TaiI ACGT 6 cut(s) 333, 351, 512, 731, 822, 1272
TaqI TCGA 1 cut(s) 1359
TasI AATT 4 cut(s) 456, 756, 785, 1080
TatI WGTACW 3 cut(s) 294, 983, 993
TauI GCSGC 2 cut(s) 935, 1424
TfiI GAWTC 1 cut(s) 255
Tru1I TTAA 3 cut(s) 102, 333, 882
Tru9I TTAA 3 cut(s) 102, 333, 882
TscAI CASTG 5 cut(s) 198, 292, 362, 996, 1397
TseFI GTSAC 3 cut(s) 664, 926, 1336
TseI GCWGC 7 cut(s) 156, 238, 241, 635, 1223, 1418, 1424
Tsp45I GTSAC 3 cut(s) 664, 926, 1336
TspDTI ATGAA 3 cut(s) 63, 541, 1273
TspGWI ACGGA 2 cut(s) 124, 267
TspRI CASTG 5 cut(s) 198, 292, 362, 996, 1397
VpaK11BI GGWCC 1 cut(s) 513
XapI RAATTY 1 cut(s) 785
XceI RCATGY 3 cut(s) 767, 984, 1024
XmiI GTMKAC 3 cut(s) 855, 1161, 1359
XmnI GAANNNNTTC 1 cut(s) 1204
XspI CTAG 3 cut(s) 689, 1059, 1415
Zsp2I ATGCAT 2 cut(s) 765, 1026
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.