Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0011141

Physical Location & Seq

Genomic Coordinates Forward (+)

653986 .. 657564

Gene Structure 3579 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G02860.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2460 bp

ATGGCGGACAAGCTAGCTCTTCCTCTTCTCCTTCCCTGCACTCCTTCCTCTAAACCTTATTCTCACGACCAAAACCACCATATCTCTCGGACGCCTTTTCTTACTACGTCTCTTTCGTCACCACCTCCTCCGCCTGTAGAGCCTCTCCTCCACGATGTTTTCCTTCACCAGAACCCTAATTCCAGACAACCCATCAGCTCTCAAACATCTAGAAACCGTAACCGGACTCGAATTGGCAAGTCACGTGACCCTAACCTCGGTAAACCTTGGTCTTACCATGGTCTTTCTCCACAAGGTCAGCAAGTTCTTCGTTCCCTCATCGAACCCAATTTTGATTCCGGTCAATTAGATTCTGTACTCTCTGAGCTATTCGAGCCTTTTAAGGATAAACCAGAGTCTACCTCGTCGGAGTTACTAGCTTTTCTTAAAGGATTAGGATTTCATAAGAAATTCGATTTGGCTCTGCGTGCTTTTGATTGGTTTATGAAGCAAAAGGATTATCAATCCATGTTGGATAACTCTGTTGTTGCTATAATCATCAGTATGCTAGGTAAAGAAGGCAGAGTATCTTCCGCTGCAAATATGTTCAATGGTTTGCAGGAAGACGGGTTTTCGCTTGATGTCTACTCTTATACTTCGTTGATATCAGCGTTTGCTAATAGCGGAAGGTATAGGGAAGCTGTAAATGTGTTCAAGAAGATGGAGGAAGATGGTTGTAAACCGACTTTGATAACGTATAATGTTATCTTGAATGTGTTTGGGAAAATGGGTACTCCTTGGAATAAGATTACGTCTCTTGTTGAGAAGATGAAGAGTGATGGGATTGCTCCGGATGCGTATACTTACAACACTCTTATAACTTGTTGTAAACGAGGCTCTTTGCATCAGGAAGCTGCTCAGGTTTTTGAAGAAATGAAGGCTGCTGGGTTTAGTTATGATAAGGTTACTTATAATGCGTTATTAGATGTTTATGGAAAGTCTCATCGGCCTAAGGAAGCTATGAAGGTTTTGAATGAAATGGTGCTCAATGGATTTTCTCCGAGCATTGTGACTTACAACTCCTTGATCTCTGCATATGCGAGGGATGGTATGCTGGATGAGGCAATGGAGCTTAAAAATCAGATGGCGGAAAAGGGAACGAAACCTGATGTTTTTACTTATACAACACTTTTGTCAGGGTTTGAGAGGGCTGGGAAGGTCGAATCTGCTATGAGTATTTTTGAAGAGATGAGAAATGCAGGGTGCAAACCAAATATTTGTACTTTTAATGCCTTTATAAAGATGTATGGTAACAGGGGAAAGTTTACTGAAATGATGAAGATATTTGACGAGATCAATGTGTGTGGTCTCTCCCCCGACATTGTCACTTGGAATACACTATTAGCAGTCTTTGGCCAAAACGGGATGGATTCAGAAGTATCGGGTGTATTCAAGGAAATGAAGAGAGCTGGGTTCGTACCCGAAAGGGAAACTTTCAACACCCTAATCAGTGCGTATAGCCGCTGTGGTTCGTTTGAACAAGCTATGACTGTTTACAGACGAATGCTTGATGCTGGGGTCACTCCTGACCTTTCCACCTATAACACTGTGTTGGCAGCTTTGGCCCGTGGAGGAATGTGGGAACAATCTGAAAAAGTTCTTGCAGAGATGGAGGATGGTCGGTGCAAACCAAATGAATTAACTTACTGCTCTCTACTTCATGCATATGCAAATGGCAAGGAGATTGGTCTGATGCATTCTCTAGCAGAAGAGGTTTATTCTGGAGTTATCGAGCCTCGAGCTGTGCTTTTGAAGACCCTTGTCTTGGTTTGTAGTAAGTGTGATCTTTTGCCAGAGGCTGAACGTGCATTCTCTGAGCTCAAAGAAAGAGGGTTTTCACCAGACATAACCACATTAAATTCCATGGTCTCCATATATGGAAGAAGGCAGATGGTGGCAAAGGCGAACGGAGTCTTGGACTACATGAAAGAAAGGGGTTTCACACCAAGCATGGCGACCTACAATAGCCTCATGTATATGCATAGTCGGTCTGCAGATTTCGGAAAATCAGAGGAAATCTTGAGGGAAATACTGGCTAAGGGGATCAAGCCAGACATCATATCGTACAACACAGTCATTTACGCCTATTGTAGAAATACTCGGATGAGAGATGCATCTAGAATATTTTCAGAGATGAGGAATTCAGGGATTGTCCCTGATGTTATCACCTACAATACGTTTATTGGTTCTTATGCAGCTGACTCAATGTTTGAGGAGGCCATCGGCGTCGTTAGGTACATGATCAAGCATGGTTGTAGACCAAACCAGAACACCTACAACTCCATTGTCGATGGATACTGCAAGCTAAACAGGAAAGATGAGGCAAAACTTTTTGTCGAAGATCTGAGGAATCTTGATCCCCATGCTCCCAAAGGCGAGGATCTTAGGTTGCTGGAACGGATAGTGAAGAAGTGGCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

819

Amino Acids

92.08

Weight (kDa)

7.78

Isoelectric Point (pI)

39.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_24	PF23276	175 - 304	4e-12	Fungal tetratrico peptide repeats
PPR_2	PF13041	178 - 220	1e-06	PPR repeat family
PPR_3	PF13812	197 - 256	3.7e-20	Pentatricopeptide repeat domain
PPR_1	PF12854	203 - 235	4.6e-07	PPR repeat
PPR_2	PF13041	207 - 254	3.6e-13	PPR repeat family
PPR	PF01535	209 - 239	1.5e-08	PPR repeat
PPR_2	PF13041	244 - 289	1.8e-10	PPR repeat family
PPR_3	PF13812	265 - 326	1.8e-12	Pentatricopeptide repeat domain
PPR_long	PF17177	266 - 399	8.3e-13	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	273 - 306	6.3e-06	PPR repeat
PPR_3	PF13812	301 - 359	3.3e-13	Pentatricopeptide repeat domain
PPR_1	PF12854	309 - 341	5.7e-06	PPR repeat
PPR_2	PF13041	313 - 356	1.6e-12	PPR repeat family
PPR	PF01535	315 - 345	4e-07	PPR repeat
PPR_3	PF13812	335 - 382	1.2e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	343 - 375	8.8e-11	PPR repeat
PPR_2	PF13041	347 - 394	1.2e-17	PPR repeat family
PPR	PF01535	350 - 379	7.5e-09	PPR repeat
TPR_24	PF23276	351 - 444	6e-07	Fungal tetratrico peptide repeats
PPR_3	PF13812	371 - 432	3.4e-20	Pentatricopeptide repeat domain
PPR_1	PF12854	378 - 411	4.2e-10	PPR repeat
PPR	PF01535	385 - 415	6.5e-08	PPR repeat
PPR_2	PF13041	388 - 427	7.1e-10	PPR repeat family
TPR_24	PF23276	396 - 514	1.9e-06	Fungal tetratrico peptide repeats
PPR_2	PF13041	417 - 456	1.3e-06	PPR repeat family
PPR_3	PF13812	440 - 499	2.4e-10	Pentatricopeptide repeat domain
PPR_2	PF13041	452 - 492	3.9e-06	PPR repeat family
PPR	PF01535	455 - 485	2.6e-06	PPR repeat
PPR_long	PF17177	472 - 571	5.4e-08	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	491 - 536	2e-11	PPR repeat family
PPR	PF01535	491 - 520	6.3e-07	PPR repeat
PPR_3	PF13812	512 - 570	1.5e-08	Pentatricopeptide repeat domain
PPR_2	PF13041	522 - 571	3.7e-11	PPR repeat family
TPR_24	PF23276	614 - 724	3.1e-06	Fungal tetratrico peptide repeats
PPR_3	PF13812	617 - 673	2.7e-08	Pentatricopeptide repeat domain
PPR_2	PF13041	627 - 672	1.2e-08	PPR repeat family
PPR_long	PF17177	643 - 715	6e-06	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	686 - 744	8.5e-14	Pentatricopeptide repeat domain
PPR_1	PF12854	693 - 726	1.2e-10	PPR repeat
PPR_2	PF13041	697 - 744	1.9e-15	PPR repeat family
PPR	PF01535	700 - 730	8.7e-07	PPR repeat
PPR_1	PF12854	729 - 760	1e-05	PPR repeat
PPR_2	PF13041	732 - 781	1.9e-14	PPR repeat family
PPR_1	PF12854	764 - 794	1.5e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0011141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02860 AT5G02860 AT5G02860 AT5G02860 AT5G02860
fragaria_vesca	FvH4_2g04590
malus_domestica	MD10G1101600.v1.1
prunus_persica	Prupe.8G139200_v2.0.a1
pyrus_communis	pycom10g08710
rosa_chinensis	RchiOBHm_Chr6g0254201
rosa_laevigata	RLG00000014936
rosa_multiflora	Rmu_sc0000010.1_g000016 Rmu_sc0003711.1_g000009
rosa_roxburghii	Rroxscaffold_7G00211090
rosa_rugosa	Rorug05G0550600
rosa_samantha	Rh6AG067000 Rh6BG060100 Rh6CG059900 Rh6DG056900
rosa_wichuraiana	Rw6G005880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	857, 951, 1277
AccI	GTMKAC	4 cut(s)	398, 624, 839, 2296
AccIII	TCCGGA	1 cut(s)	829
AciI	CCGC	6 cut(s)	5, 131, 573, 663, 1127, 1501
AclWI	GGATC	3 cut(s)	2090, 2390, 2427
AcoI	YGGCCR	2 cut(s)	1393, 2453
AcsI	RAATTY	3 cut(s)	449, 1897, 2179
AcvI	CACGTG	1 cut(s)	245
AcyI	GRCGYC	2 cut(s)	92, 2265
AfaI	GTAC	6 cut(s)	357, 772, 1261, 1458, 2105, 2276
AfiI	CCNNNNNNNGG	2 cut(s)	257, 1804
AjuI	GAANNNNNNNTTGG	4 cut(s)	440, 472, 1937, 1969
AloI	GAACNNNNNNTCC	2 cut(s)	164, 196
Alw21I	GWGCWC	2 cut(s)	1026, 1860
Alw26I	GTCTC	5 cut(s)	114, 798, 984, 1352, 1912
AlwI	GGATC	3 cut(s)	2090, 2390, 2427
AlwNI	CAGNNNCTG	1 cut(s)	1838
Ama87I	CYCGRG	1 cut(s)	1776
Aor13HI	TCCGGA	1 cut(s)	829
AoxI	GGCC	5 cut(s)	986, 1393, 1602, 2256, 2453
ApeKI	GCWGC	5 cut(s)	575, 893, 920, 1595, 2234
ApoI	RAATTY	3 cut(s)	449, 1897, 2179
ArsI	GACNNNNNNTTYG	2 cut(s)	2231, 2263
Asp700I	GAANNNNTTC	2 cut(s)	1635, 2164
AspS9I	GGNCC	1 cut(s)	1603
AsuHPI	GGTGA	4 cut(s)	111, 158, 1869, 2197
AsuNHI	GCTAGC	1 cut(s)	13
AvaI	CYCGRG	1 cut(s)	1776
AxyI	CCTNAGG	1 cut(s)	990
BalI	TGGCCA	2 cut(s)	1395, 2455
BanII	GRGCYC	1 cut(s)	1860
BbrPI	CACGTG	1 cut(s)	245
BbsI	GAAGAC	2 cut(s)	609, 1799
Bbv12I	GWGCWC	2 cut(s)	1026, 1860
BbvI	GCAGC	5 cut(s)	562, 880, 907, 1607, 2246
BcgI	CGANNNNNNTGC	2 cut(s)	290, 324
BciVI	GTATCC	1 cut(s)	2327
BclI	TGATCA	1 cut(s)	2280
BcoDI	GTCTC	5 cut(s)	114, 798, 984, 1352, 1912
BfaI	CTAG	6 cut(s)	14, 210, 416, 548, 1742, 2157
BfmI	CTRYAG	2 cut(s)	135, 2031
BfuI	GTATCC	1 cut(s)	2327
BglII	AGATCT	1 cut(s)	2380
BisI	GCNGC	6 cut(s)	576, 894, 921, 1501, 1596, 2235
BlsI	GCNGC	6 cut(s)	577, 895, 922, 1502, 1597, 2236
BmeT110I	CYCGRG	1 cut(s)	1776
BmgT120I	GGNCC	1 cut(s)	1603
BmsI	GCATC	6 cut(s)	823, 892, 1540, 1722, 2140, 2162
BmtI	GCTAGC	1 cut(s)	17
BoxI	GACNNNNGTC	1 cut(s)	1799
BpiI	GAAGAC	2 cut(s)	609, 1799
BplI	GAGNNNNNCTC	2 cut(s)	386, 418
BpmI	CTGGAG	1 cut(s)	1782
Bpu10I	CCTNAGC	2 cut(s)	897, 2076
BpuEI	CTTGAG	1 cut(s)	2080
BsaAI	YACGTR	1 cut(s)	245
BsaHI	GRCGYC	2 cut(s)	92, 2265
BsaI	GGTCTC	2 cut(s)	1352, 1912
BsaJI	CCNNGG	6 cut(s)	256, 266, 277, 776, 1606, 1902
BsaWI	WCCGGW	3 cut(s)	222, 338, 829
Bsc4I	CCNNNNNNNGG	2 cut(s)	257, 1804
Bse1I	ACTGG	1 cut(s)	2076
Bse21I	CCTNAGG	1 cut(s)	990
Bse3DI	GCAATG	1 cut(s)	1110
BseAI	TCCGGA	1 cut(s)	829
BseDI	CCNNGG	6 cut(s)	256, 266, 277, 776, 1606, 1902
BseGI	GGATG	6 cut(s)	838, 1090, 1102, 1410, 1660, 2148
BseLI	CCNNNNNNNGG	2 cut(s)	257, 1804
BseMI	GCAATG	1 cut(s)	1110
BseMII	CTCAG	4 cut(s)	354, 911, 1845, 2375
BseNI	ACTGG	1 cut(s)	2076
BseRI	GAGGAG	3 cut(s)	117, 137, 2267
BseXI	GCAGC	5 cut(s)	562, 880, 907, 1607, 2246
BseYI	CCCAGC	4 cut(s)	923, 1190, 1448, 1553
BsgI	GTGCAG	1 cut(s)	22
BshFI	GGCC	5 cut(s)	988, 1395, 1604, 2258, 2455
BsiHKAI	GWGCWC	2 cut(s)	1026, 1860
BsiHKCI	CYCGRG	1 cut(s)	1776
BsiSI	CCGG	3 cut(s)	223, 339, 830
BslFI	GGGAC	1 cut(s)	2177
BslI	CCNNNNNNNGG	2 cut(s)	257, 1804
BsmAI	GTCTC	5 cut(s)	114, 798, 984, 1352, 1912
BsmBI	CGTCTC	2 cut(s)	114, 798
BsmFI	GGGAC	1 cut(s)	2177
BsmI	GAATGC	3 cut(s)	1548, 1735, 1847
BsnI	GGCC	5 cut(s)	988, 1395, 1604, 2258, 2455
Bso31I	GGTCTC	2 cut(s)	1352, 1912
BsoBI	CYCGRG	1 cut(s)	1776
Bsp1286I	GDGCHC	2 cut(s)	1026, 1860
Bsp13I	TCCGGA	1 cut(s)	829
Bsp143I	GATC	8 cut(s)	1065, 1332, 1822, 2082, 2280, 2380, 2395, 2419
Bsp19I	CCATGG	2 cut(s)	277, 1902
BspACI	CCGC	6 cut(s)	5, 131, 573, 663, 1127, 1501
BspANI	GGCC	5 cut(s)	988, 1395, 1604, 2258, 2455
BspCNI	CTCAG	4 cut(s)	355, 910, 1846, 2376
BspEI	TCCGGA	1 cut(s)	829
BspMAI	CTGCAG	1 cut(s)	2035
BspOI	GCTAGC	1 cut(s)	17
BspPI	GGATC	3 cut(s)	2090, 2390, 2427
BspQI	GCTCTTC	1 cut(s)	24
BspTNI	GGTCTC	2 cut(s)	1352, 1912
BsrDI	GCAATG	1 cut(s)	1110
BsrI	ACTGG	1 cut(s)	2076
BssECI	CCNNGG	6 cut(s)	256, 266, 277, 776, 1606, 1902
BssMI	GATC	8 cut(s)	1065, 1332, 1822, 2082, 2280, 2380, 2395, 2419
BssNAI	GTATAC	1 cut(s)	840
BssNI	GRCGYC	2 cut(s)	92, 2265
BssT1I	CCWWGG	4 cut(s)	266, 277, 776, 1902
Bst1107I	GTATAC	1 cut(s)	840
Bst4CI	ACNGT	4 cut(s)	218, 1531, 1588, 2113
Bst6I	CTCTTC	6 cut(s)	24, 30, 806, 1218, 1436, 1743
BstACI	GRCGYC	2 cut(s)	92, 2265
BstBAI	YACGTR	1 cut(s)	245
BstC8I	GCNNGC	3 cut(s)	15, 468, 2342
BstDEI	CTNAG	7 cut(s)	363, 897, 990, 1854, 2076, 2384, 2423
BstDSI	CCRYGG	3 cut(s)	277, 1606, 1902
BstF5I	GGATG	6 cut(s)	838, 1090, 1102, 1410, 1660, 2148
BstKTI	GATC	8 cut(s)	1068, 1335, 1825, 2085, 2283, 2383, 2398, 2422
BstMAI	GTCTC	5 cut(s)	114, 798, 984, 1352, 1912
BstMBI	GATC	8 cut(s)	1065, 1332, 1822, 2082, 2280, 2380, 2395, 2419
BstMWI	GCNNNNNNNGC	6 cut(s)	139, 373, 467, 833, 1601, 1844
BstPAI	GACNNNNGTC	1 cut(s)	1799
BstSFI	CTRYAG	2 cut(s)	135, 2031
BstV1I	GCAGC	5 cut(s)	562, 880, 907, 1607, 2246
BstV2I	GAAGAC	2 cut(s)	609, 1799
BstX2I	RGATCY	2 cut(s)	2380, 2419
BstYI	RGATCY	2 cut(s)	2380, 2419
BstZ17I	GTATAC	1 cut(s)	840
Bsu36I	CCTNAGG	1 cut(s)	990
BsuI	GTATCC	1 cut(s)	2327
BsuRI	GGCC	5 cut(s)	988, 1395, 1604, 2258, 2455
BtgI	CCRYGG	3 cut(s)	277, 1606, 1902
BtsCI	GGATG	6 cut(s)	838, 1090, 1102, 1410, 1660, 2148
BtsIMutI	CAGTG	2 cut(s)	1495, 1584
Cac8I	GCNNGC	3 cut(s)	15, 468, 2342
CaiI	CAGNNNCTG	1 cut(s)	1838
Cfr13I	GGNCC	1 cut(s)	1603
CseI	GACGC	2 cut(s)	100, 2254
Csp6I	GTAC	6 cut(s)	356, 771, 1260, 1457, 2104, 2275
CspCI	CAANNNNNGTGG	2 cut(s)	1324, 1359
CviQI	GTAC	6 cut(s)	356, 771, 1260, 1457, 2104, 2275
DdeI	CTNAG	7 cut(s)	363, 897, 990, 1854, 2076, 2384, 2423
DpnI	GATC	8 cut(s)	1067, 1334, 1824, 2084, 2282, 2382, 2397, 2421
DpnII	GATC	8 cut(s)	1065, 1332, 1822, 2082, 2280, 2380, 2395, 2419
EaeI	YGGCCR	2 cut(s)	1393, 2453
Eam1104I	CTCTTC	6 cut(s)	24, 30, 806, 1218, 1436, 1743
EarI	CTCTTC	6 cut(s)	24, 30, 806, 1218, 1436, 1743
EciI	GGCGGA	3 cut(s)	20, 120, 1142
Ecl136II	GAGCTC	1 cut(s)	1858
Eco130I	CCWWGG	4 cut(s)	266, 277, 776, 1902
Eco24I	GRGCYC	1 cut(s)	1860
Eco31I	GGTCTC	2 cut(s)	1352, 1912
Eco32I	GATATC	1 cut(s)	645
Eco53kI	GAGCTC	1 cut(s)	1858
Eco72I	CACGTG	1 cut(s)	245
Eco81I	CCTNAGG	1 cut(s)	990
Eco88I	CYCGRG	1 cut(s)	1776
EcoICRI	GAGCTC	1 cut(s)	1858
EcoRI	GAATTC	1 cut(s)	2179
EcoRV	GATATC	1 cut(s)	645
EcoT14I	CCWWGG	4 cut(s)	266, 277, 776, 1902
EcoT22I	ATGCAT	4 cut(s)	1705, 1737, 2022, 2155
EcoT38I	GRGCYC	1 cut(s)	1860
ErhI	CCWWGG	4 cut(s)	266, 277, 776, 1902
Esp3I	CGTCTC	2 cut(s)	114, 798
FalI	AAGNNNNNCTT	2 cut(s)	1456, 1488
FaqI	GGGAC	1 cut(s)	2177
FauNDI	CATATG	2 cut(s)	1075, 1705
FbaI	TGATCA	1 cut(s)	2280
FblI	GTMKAC	4 cut(s)	398, 624, 839, 2296
Fnu4HI	GCNGC	6 cut(s)	576, 894, 921, 1501, 1596, 2235
FokI	GGATG	6 cut(s)	845, 1097, 1109, 1417, 1667, 2155
FriOI	GRGCYC	1 cut(s)	1860
Fsp4HI	GCNGC	6 cut(s)	576, 894, 921, 1501, 1596, 2235
FspBI	CTAG	6 cut(s)	14, 210, 416, 548, 1742, 2157
GluI	GCNGC	6 cut(s)	576, 894, 921, 1501, 1596, 2235
GsaI	CCCAGC	4 cut(s)	927, 1194, 1452, 1557
GsuI	CTGGAG	1 cut(s)	1782
HaeIII	GGCC	5 cut(s)	988, 1395, 1604, 2258, 2455
HapII	CCGG	3 cut(s)	223, 339, 830
HgaI	GACGC	2 cut(s)	100, 2254
Hin1I	GRCGYC	2 cut(s)	92, 2265
HinfI	GANTC	9 cut(s)	226, 335, 350, 395, 1202, 1409, 1950, 2240, 2389
HpaII	CCGG	3 cut(s)	223, 339, 830
HphI	GGTGA	4 cut(s)	111, 158, 1869, 2197
Hpy166II	GTNNAC	9 cut(s)	263, 399, 625, 719, 840, 869, 1305, 1534, 2297
Hpy8I	GTNNAC	9 cut(s)	263, 399, 625, 719, 840, 869, 1305, 1534, 2297
Hpy99I	CGWCG	2 cut(s)	409, 2270
HpyAV	CCTTC	9 cut(s)	41, 54, 173, 551, 660, 910, 997, 1189, 1917
HpyCH4III	ACNGT	4 cut(s)	218, 1531, 1588, 2113
HpyCH4IV	ACGT	6 cut(s)	107, 244, 734, 791, 1843, 2216
HpyF10VI	GCNNNNNNNGC	6 cut(s)	139, 373, 467, 833, 1601, 1844
HpyF3I	CTNAG	7 cut(s)	363, 897, 990, 1854, 2076, 2384, 2423
HpySE526I	ACGT	6 cut(s)	107, 244, 734, 791, 1843, 2216
Hsp92I	GRCGYC	2 cut(s)	92, 2265
Kpn2I	TCCGGA	1 cut(s)	829
Ksp22I	TGATCA	1 cut(s)	2280
Kzo9I	GATC	8 cut(s)	1065, 1332, 1822, 2082, 2280, 2380, 2395, 2419
LguI	GCTCTTC	1 cut(s)	24
LmnI	GCTCC	3 cut(s)	832, 1108, 2410
Lsp1109I	GCAGC	5 cut(s)	562, 880, 907, 1607, 2246
LweI	GCATC	6 cut(s)	823, 892, 1540, 1722, 2140, 2162
MaeI	CTAG	6 cut(s)	14, 210, 416, 548, 1742, 2157
MaeII	ACGT	6 cut(s)	107, 244, 734, 791, 1843, 2216
MalI	GATC	8 cut(s)	1067, 1334, 1824, 2084, 2282, 2382, 2397, 2421
MboI	GATC	8 cut(s)	1065, 1332, 1822, 2082, 2280, 2380, 2395, 2419
MflI	RGATCY	2 cut(s)	2380, 2419
MhlI	GDGCHC	2 cut(s)	1026, 1860
MlsI	TGGCCA	2 cut(s)	1395, 2455
MluCI	AATT	8 cut(s)	178, 231, 328, 344, 449, 1676, 1897, 2179
MluNI	TGGCCA	2 cut(s)	1395, 2455
MlyI	GAGTC	4 cut(s)	220, 404, 1959, 2234
MmeI	TCCRAC	2 cut(s)	387, 492
Mox20I	TGGCCA	2 cut(s)	1395, 2455
Mph1103I	ATGCAT	4 cut(s)	1705, 1737, 2022, 2155
MroI	TCCGGA	1 cut(s)	829
MroXI	GAANNNNTTC	2 cut(s)	1635, 2164
MscI	TGGCCA	2 cut(s)	1395, 2455
MseI	TTAA	6 cut(s)	381, 426, 1113, 1266, 1679, 1895
MslI	CAYNNNNRTG	3 cut(s)	542, 1704, 2015
Msp20I	TGGCCA	2 cut(s)	1395, 2455
MspA1I	CMGCKG	3 cut(s)	575, 1503, 2237
MspI	CCGG	3 cut(s)	223, 339, 830
Mva1269I	GAATGC	3 cut(s)	1548, 1735, 1847
MwoI	GCNNNNNNNGC	6 cut(s)	139, 373, 467, 833, 1601, 1844
NcoI	CCATGG	2 cut(s)	277, 1902
NdeI	CATATG	2 cut(s)	1075, 1705
NdeII	GATC	8 cut(s)	1065, 1332, 1822, 2082, 2280, 2380, 2395, 2419
NheI	GCTAGC	1 cut(s)	13
NmuCI	GTSAC	6 cut(s)	117, 240, 245, 1048, 1363, 1558
NsiI	ATGCAT	4 cut(s)	1705, 1737, 2022, 2155
PaeR7I	CTCGAG	1 cut(s)	1776
PciSI	GCTCTTC	1 cut(s)	24
PcsI	WCGNNNNNNNCGW	1 cut(s)	113
PctI	GAATGC	3 cut(s)	1548, 1735, 1847
PdmI	GAANNNNTTC	2 cut(s)	1635, 2164
PfeI	GAWTC	5 cut(s)	335, 350, 1202, 1409, 2389
PflFI	GACNNNGTC	1 cut(s)	1361
PkrI	GCNGC	6 cut(s)	577, 895, 922, 1502, 1597, 2236
PleI	GAGTC	4 cut(s)	220, 403, 1958, 2234
PmaCI	CACGTG	1 cut(s)	245
PmlI	CACGTG	1 cut(s)	245
PpsI	GAGTC	4 cut(s)	220, 403, 1958, 2234
Ppu21I	YACGTR	1 cut(s)	245
PshAI	GACNNNNGTC	1 cut(s)	1799
PsiI	TTATAA	3 cut(s)	857, 951, 1277
Psp124BI	GAGCTC	1 cut(s)	1860
PspCI	CACGTG	1 cut(s)	245
PspFI	CCCAGC	4 cut(s)	923, 1190, 1448, 1553
PspPI	GGNCC	1 cut(s)	1603
PspXI	VCTCGAGB	1 cut(s)	1776
PstI	CTGCAG	1 cut(s)	2035
PstNI	CAGNNNCTG	1 cut(s)	1838
PsuI	RGATCY	2 cut(s)	2380, 2419
PsyI	GACNNNGTC	1 cut(s)	1361
PvuII	CAGCTG	1 cut(s)	2237
RsaI	GTAC	6 cut(s)	357, 772, 1261, 1458, 2105, 2276
RsaNI	GTAC	6 cut(s)	356, 771, 1260, 1457, 2104, 2275
RseI	CAYNNNNRTG	3 cut(s)	542, 1704, 2015
SacI	GAGCTC	1 cut(s)	1860
SapI	GCTCTTC	1 cut(s)	24
SaqAI	TTAA	6 cut(s)	381, 426, 1113, 1266, 1679, 1895
SatI	GCNGC	6 cut(s)	576, 894, 921, 1501, 1596, 2235
Sau3AI	GATC	8 cut(s)	1065, 1332, 1822, 2082, 2280, 2380, 2395, 2419
Sau96I	GGNCC	1 cut(s)	1603
SchI	GAGTC	4 cut(s)	220, 404, 1959, 2234
SduI	GDGCHC	2 cut(s)	1026, 1860
SfaNI	GCATC	6 cut(s)	823, 892, 1540, 1722, 2140, 2162
SfcI	CTRYAG	2 cut(s)	135, 2031
Sfr274I	CTCGAG	1 cut(s)	1776
SlaI	CTCGAG	1 cut(s)	1776
SmiMI	CAYNNNNRTG	3 cut(s)	542, 1704, 2015
SmlI	CTYRAG	2 cut(s)	1776, 2059
SmoI	CTYRAG	2 cut(s)	1776, 2059
Sse9I	AATT	8 cut(s)	178, 231, 328, 344, 449, 1676, 1897, 2179
SsiI	CCGC	6 cut(s)	5, 131, 573, 663, 1127, 1501
SspI	AATATT	2 cut(s)	1255, 2163
SspMI	CTAG	6 cut(s)	14, 210, 416, 548, 1742, 2157
SstI	GAGCTC	1 cut(s)	1860
StyI	CCWWGG	4 cut(s)	266, 277, 776, 1902
TaaI	ACNGT	4 cut(s)	218, 1531, 1588, 2113
TaiI	ACGT	6 cut(s)	110, 247, 737, 794, 1846, 2219
TaqI	TCGA	9 cut(s)	229, 321, 372, 453, 1200, 1770, 1777, 2328, 2376
TaqII	GACCGA	1 cut(s)	2016
TasI	AATT	8 cut(s)	178, 231, 328, 344, 449, 1676, 1897, 2179
TatI	WGTACW	2 cut(s)	355, 1259
TauI	GCSGC	1 cut(s)	1503
TfiI	GAWTC	5 cut(s)	335, 350, 1202, 1409, 2389
Tru1I	TTAA	6 cut(s)	381, 426, 1113, 1266, 1679, 1895
Tru9I	TTAA	6 cut(s)	381, 426, 1113, 1266, 1679, 1895
TscAI	CASTG	2 cut(s)	1495, 1591
TseFI	GTSAC	6 cut(s)	117, 240, 245, 1048, 1363, 1558
TseI	GCWGC	5 cut(s)	575, 893, 920, 1595, 2234
Tsp45I	GTSAC	6 cut(s)	117, 240, 245, 1048, 1363, 1558
TspGWI	ACGGA	2 cut(s)	1962, 2452
TspRI	CASTG	2 cut(s)	1495, 1591
Tth111I	GACNNNGTC	1 cut(s)	1361
XapI	RAATTY	3 cut(s)	449, 1897, 2179
XbaI	TCTAGA	2 cut(s)	209, 2156
XhoI	CTCGAG	1 cut(s)	1776
XmiI	GTMKAC	4 cut(s)	398, 624, 839, 2296
XmnI	GAANNNNTTC	2 cut(s)	1635, 2164
XspI	CTAG	6 cut(s)	14, 210, 416, 548, 1742, 2157
Zsp2I	ATGCAT	4 cut(s)	1705, 1737, 2022, 2155

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.