Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0011141

Physical Location & Seq

Genomic Coordinates Reverse (-)

3520083 .. 3522533

Gene Structure 2451 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g04590.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2451 bp

ATGGCTGACAAAATGGCTCTCCCTCTTCTCCTCCCTAACCCACCTCCCTCCTCCTCTAAGCCCTTCTTCCCCAACCACCACCAAACCCAAAACCCATCTCCACCACCACCTCTCCCTCCACCTCCACCACCACCCATCACCCCAATTCTCCATGAACTCCTCTCCTCCCCACAATCCCAACACCCCTCTTATCCCAGAAGCCGCACGCGCATCGGCCGCTCGCGTGACTCCAACCGCGGCAAGCCCTGGTCCCACCACCGTCTCTCCTCCCAAGGTCAGCACATCCTAGACTCCTTAATCAACTCACCCTTTGACTCCTCTAAGCTAGATGAACAGCTTCATAGTCTAGTTGAGTTGCATAGAGATGAGTTCGGGTCTAGCTTGGATTCTTTGTCTTTGGATGTTCTGGGTATTGTTAAAGGCTTGGCTTTTTACAAGAAATTCGAGCTGGCTGTGAGTGTGTTTGAGTGGTTCAGGAAGCGTGATGATTGTAGCTACATTTTGAGTGGTTCTGTTGTGTCTGTGGTTATTAGCATTCTTGGGAAAATGGGCCGGGTTTCGAGTGCCGCTTCGTTGTTTAGGAGTTTACATAAGGATGGATTTGATCTTGATGTTTATGCTTACACCTCTTTGATTACTGCTTGTGCTAGTAATGGGAGGTACAGGGAGGCGGTTTCGGTTTTTAAGAAAATGGAGGAGGAGGGGTGCAAGCCCACTTTGATAACTTACAATGTGGTTTTGAATGTGTATGGGAAAATGGGTACTCCTTGGCATAAGATAAAAGCTATTGTTGAGGGCATGAAGAGTGCCGGGATTGCCCCGGATTCTTATACTTATAACACGCTGATAACTTGTTGTCGGCGGGGGTCTTTGTATGTAGAGGCTGCTGAGGTTTTTGAGGAGATGAAAGCAGCAGGGTTTGCACCTGATAAGGTCACGTATAACGCGTTGTTGGATGTTTATGGGAAGTCTCGGAGGACTAAGGAAGCAATGGAGGTGTTGAAAGACATGGAGCTTAATGGGTTTTCCCCAAGCATTGTGTCTTACAATTCATTGATATCAGCTTATGCAAGAGATGGTTTGTTGGAGGAAGCAATGGCCCTGAAAAGCCAGATGGTGGAAAGGGGGATTAAACCTGATGTTTTTACCTACACCACCCTTTTCTCAGGATATGAGAAGGCTGGGAAGGATGAGGCTGCAATGAGGGTCTTTGAGGAGATGAGAGGTTCTGGTTGCAAGCCAAACATTTGTACCTTTAATGCCCTTATCAAGATGCACGGAAATAGGGGAAAGTTCACAGAAATGATGAATGTTCTTGAAGAGATAAATGCATGTAAGTGCACCCCGGATATTGTTACTTGGAATACACTTTTGGCAGTATTTGGCCAAAATGGGATGGACTCAGAAGTGTCGGGGGTGTTCAGAGAGATGAAGAGGGCAGGATTTGTACCTGAGAGGGATACTTTTAACACCCTAATCAGTGCATACAGCCGATGTGGTTCTTTTGACCAAGCCGTGGAGGTGTATAAGAGTATGCAAGAAGCTGGAATTACCCCAGACCTTTCCTCATATAATGCTGTTTTGGCAGCATTGGCTCGAGGTGGGCTTTGGGAACAGTCTGAGAAAATACTTGCTGAAATGAAGAATGGTCGTTGCAAACCCAATGAGCTTACATATAGTTCTCTTCTCCATGCTTACGCCAATGGCAAAGAAATGGAACGCATGCATATCTTGGCTGAAGAAATATACTCTGCTGTAATTGAACCGCATGCTGTGGTCTTAAAGACACTTGTTCTTGTTTTTAGTAAGAGCGACCTCTTGTTGGAAACAGAACATGCCTTCTTGGAACTGAGAAAGAAAGGGTTTTCACCTGACATAACTACACTGAATGCCATGTTATCAATATATGGTCGGAGGCAGATGGTCTCAAAAGCAAGTGAGATATTGAGATTCATGAATGAAATGGGTTACACTCCTAGCTTGACGACATACAATAGTGTGATGTATATGTACAGTCGCTCAGAAGATTTTGAGAAGTCGGAAACTTTTCTAAGGGAGATTATGGAGAAGGGAATAAAGCCGGATATAATTTCCTACAATACTGTTATCTATGCTTATTGTAGAAATGGTCGTATGAGAGACGCTTCACGGATATTCTCAGAGATGGGTGCTTCCGGGATTTCTCCAGATGTAATCACTTACAACACCTTTGTGGCAAGTTATGCAGCCGATTCATTGTTTGTTGAAGCCATTGATGTGGTACGGTACATGATTAAGCATGGGTGCAAACCTAACCAGAATACATACAACTCCATTGTAGATTGGTACTGCAAGCACAATCGACAAGATGAGGGAAAGAAGTTTGTTGACAACCTTCGCGAACTTGATCCACATATTGCGACGGGGGAGGACAGCAGATTACTAGACCGTATTAGAAATAAATGGTCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

817

Amino Acids

91.72

Weight (kDa)

7.26

Isoelectric Point (pI)

45.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_24	PF23276	172 - 301	2.8e-09	Fungal tetratrico peptide repeats
PPR_3	PF13812	191 - 253	1.6e-20	Pentatricopeptide repeat domain
PPR_2	PF13041	204 - 250	3.4e-13	PPR repeat family
PPR	PF01535	207 - 236	5.8e-09	PPR repeat
PPR_2	PF13041	238 - 286	1.3e-09	PPR repeat family
PPR_long	PF17177	263 - 397	1.3e-11	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	263 - 323	2.1e-12	Pentatricopeptide repeat domain
PPR_2	PF13041	285 - 319	5.3e-06	PPR repeat family
PPR_1	PF12854	306 - 338	4.7e-07	PPR repeat
PPR_2	PF13041	309 - 345	9.6e-08	PPR repeat family
PPR	PF01535	312 - 342	4.1e-07	PPR repeat
PPR_1	PF12854	340 - 373	3.6e-08	PPR repeat
PPR_2	PF13041	344 - 391	5e-17	PPR repeat family
PPR	PF01535	347 - 377	2.4e-08	PPR repeat
PPR_3	PF13812	368 - 429	3.9e-21	Pentatricopeptide repeat domain
PPR_1	PF12854	375 - 408	6.3e-08	PPR repeat
PPR	PF01535	382 - 412	6.7e-07	PPR repeat
PPR_2	PF13041	386 - 425	3.4e-09	PPR repeat family
PPR_3	PF13812	438 - 496	3.2e-09	Pentatricopeptide repeat domain
PPR_2	PF13041	449 - 490	1.2e-06	PPR repeat family
PPR	PF01535	452 - 482	4.4e-06	PPR repeat
PPR_long	PF17177	469 - 597	1.5e-09	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	473 - 530	5.9e-10	Pentatricopeptide repeat domain
PPR	PF01535	488 - 517	8.8e-08	PPR repeat
PPR_2	PF13041	488 - 533	4.8e-11	PPR repeat family
PPR_3	PF13812	509 - 567	3.2e-10	Pentatricopeptide repeat domain
PPR_2	PF13041	519 - 568	6.2e-11	PPR repeat family
PPR_3	PF13812	616 - 671	2.4e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	624 - 671	4.8e-06	PPR repeat family
PPR_3	PF13812	684 - 738	1.7e-12	Pentatricopeptide repeat domain
PPR_1	PF12854	690 - 722	5.9e-12	PPR repeat
PPR_2	PF13041	694 - 739	2.8e-15	PPR repeat family
PPR	PF01535	697 - 727	8.3e-08	PPR repeat
PPR_2	PF13041	729 - 778	5.8e-12	PPR repeat family
PPR_1	PF12854	760 - 790	2.5e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0011141)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02860 AT5G02860 AT5G02860 AT5G02860 AT5G02860
fragaria_vesca	FvH4_2g04590
malus_domestica	MD10G1101600.v1.1
prunus_persica	Prupe.8G139200_v2.0.a1
pyrus_communis	pycom10g08710
rosa_chinensis	RchiOBHm_Chr6g0254201
rosa_laevigata	RLG00000014936
rosa_multiflora	Rmu_sc0000010.1_g000016 Rmu_sc0003711.1_g000009
rosa_roxburghii	Rroxscaffold_7G00211090
rosa_rugosa	Rorug05G0550600
rosa_samantha	Rh6AG067000 Rh6BG060100 Rh6CG059900 Rh6DG056900
rosa_wichuraiana	Rw6G005880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	837
AccB7I	CCANNNNNTGG	2 cut(s)	1117, 1516
AccBSI	CCGCTC	1 cut(s)	219
AccII	CGCG	5 cut(s)	208, 223, 237, 947, 2379
AciI	CCGC	8 cut(s)	202, 217, 235, 237, 567, 671, 862, 1766
AclWI	GGATC	1 cut(s)	2381
AcoI	YGGCCR	2 cut(s)	214, 1384
AcsI	RAATTY	1 cut(s)	440
AcuI	CTGAAG	1 cut(s)	1758
AfaI	GTAC	8 cut(s)	662, 763, 1252, 1449, 2012, 2262, 2267, 2327
AfiI	CCNNNNNNNGG	3 cut(s)	1117, 1516, 1822
AflIII	ACRYGT	1 cut(s)	945
AgsI	TTSAA	5 cut(s)	742, 1003, 1319, 1763, 2246
AjnI	CCWGG	1 cut(s)	245
AjuI	GAANNNNNNNTTGG	2 cut(s)	1355, 1387
AleI	CACNNNNGTG	1 cut(s)	2210
Alw21I	GWGCWC	1 cut(s)	1343
Alw26I	GTCTC	4 cut(s)	266, 975, 1930, 2133
Alw44I	GTGCAC	1 cut(s)	1339
AlwI	GGATC	1 cut(s)	2381
Ama87I	CYCGRG	1 cut(s)	1596
AoxI	GGCC	4 cut(s)	214, 550, 1098, 1384
ApaLI	GTGCAC	1 cut(s)	1339
ApeKI	GCWGC	5 cut(s)	884, 911, 1196, 1586, 2225
ApoI	RAATTY	1 cut(s)	440
Asp700I	GAANNNNTTC	2 cut(s)	336, 2046
AspLEI	GCGC	1 cut(s)	210
AspS9I	GGNCC	3 cut(s)	249, 550, 1099
AsuC2I	CCSGG	5 cut(s)	554, 811, 821, 1346, 2176
AsuHPI	GGTGA	3 cut(s)	130, 297, 1860
AvaI	CYCGRG	1 cut(s)	1596
AvaII	GGWCC	1 cut(s)	249
BaeGI	GKGCMC	1 cut(s)	1343
BaeI	ACNNNNGTAYC	2 cut(s)	1234, 1267
BalI	TGGCCA	1 cut(s)	1386
Bbv12I	GWGCWC	1 cut(s)	1343
BbvCI	CCTCAGC	1 cut(s)	888
BbvI	GCAGC	5 cut(s)	871, 923, 1183, 1598, 2237
BccI	CCATC	8 cut(s)	103, 143, 590, 1070, 1108, 1390, 1915, 2158
BceAI	ACGGC	1 cut(s)	1499
BcgI	CGANNNNNNTGC	2 cut(s)	193, 227
BciT130I	CCWGG	1 cut(s)	247
BciVI	GTATCC	1 cut(s)	1453
BcnI	CCSGG	5 cut(s)	554, 811, 821, 1346, 2176
BcoDI	GTCTC	4 cut(s)	266, 975, 1930, 2133
BfaI	CTAG	7 cut(s)	287, 326, 347, 378, 648, 1977, 2423
BfuI	GTATCC	1 cut(s)	1453
BisI	GCNGC	9 cut(s)	202, 217, 238, 567, 885, 912, 1197, 1587, 2226
BlsI	GCNGC	9 cut(s)	203, 218, 239, 568, 886, 913, 1198, 1588, 2227
Bme1390I	CCNGG	6 cut(s)	247, 554, 811, 821, 1346, 2176
Bme18I	GGWCC	1 cut(s)	249
BmeT110I	CYCGRG	1 cut(s)	1596
BmgT120I	GGNCC	3 cut(s)	249, 550, 1099
BmiI	GGNNCC	1 cut(s)	251
BmrFI	CCNGG	6 cut(s)	247, 554, 811, 821, 1346, 2176
BmsI	GCATC	2 cut(s)	219, 1263
BpmI	CTGGAG	1 cut(s)	2169
Bpu10I	CCTNAGC	1 cut(s)	888
BpuMI	CCSGG	5 cut(s)	554, 811, 821, 1346, 2176
BsaAI	YACGTR	1 cut(s)	939
BsaI	GGTCTC	1 cut(s)	1930
BsaJI	CCNNGG	7 cut(s)	235, 245, 271, 767, 819, 1344, 1515
BsaXI	ACNNNNNCTCC	6 cut(s)	96, 126, 248, 278, 689, 719
Bsc4I	CCNNNNNNNGG	3 cut(s)	1117, 1516, 1822
Bse3DI	GCAATG	3 cut(s)	996, 1101, 1206
BseBI	CCWGG	1 cut(s)	247
BseDI	CCNNGG	7 cut(s)	235, 245, 271, 767, 819, 1344, 1515
BseGI	GGATG	6 cut(s)	282, 406, 601, 961, 1195, 1401
BseLI	CCNNNNNNNGG	3 cut(s)	1117, 1516, 1822
BseMI	GCAATG	3 cut(s)	996, 1101, 1206
BseMII	CTCAG	8 cut(s)	879, 1179, 1416, 1443, 1611, 1841, 2034, 2172
BseSI	GKGCMC	1 cut(s)	1343
BseX3I	CGGCCG	1 cut(s)	214
BseXI	GCAGC	5 cut(s)	871, 923, 1183, 1598, 2237
BseYI	CCCAGC	1 cut(s)	1181
Bsh1236I	CGCG	5 cut(s)	208, 223, 237, 947, 2379
Bsh1285I	CGRYCG	1 cut(s)	217
BshFI	GGCC	4 cut(s)	216, 552, 1100, 1386
BsiEI	CGRYCG	1 cut(s)	217
BsiHKAI	GWGCWC	1 cut(s)	1343
BsiHKCI	CYCGRG	1 cut(s)	1596
BsiSI	CCGG	6 cut(s)	553, 810, 821, 1346, 2081, 2175
BslFI	GGGAC	1 cut(s)	235
BslI	CCNNNNNNNGG	3 cut(s)	1117, 1516, 1822
BsmAI	GTCTC	4 cut(s)	266, 975, 1930, 2133
BsmBI	CGTCTC	2 cut(s)	266, 2133
BsmFI	GGGAC	1 cut(s)	235
BsmI	GAATGC	2 cut(s)	534, 1894
BsnI	GGCC	4 cut(s)	216, 552, 1100, 1386
Bso31I	GGTCTC	1 cut(s)	1930
BsoBI	CYCGRG	1 cut(s)	1596
Bsp1286I	GDGCHC	1 cut(s)	1343
Bsp1407I	TGTACA	1 cut(s)	2010
Bsp143I	GATC	2 cut(s)	604, 2386
Bsp68I	TCGCGA	1 cut(s)	2379
BspACI	CCGC	8 cut(s)	202, 217, 235, 237, 567, 671, 862, 1766
BspANI	GGCC	4 cut(s)	216, 552, 1100, 1386
BspCNI	CTCAG	8 cut(s)	880, 1178, 1415, 1444, 1612, 1842, 2033, 2171
BspFNI	CGCG	5 cut(s)	208, 223, 237, 947, 2379
BspHI	TCATGA	1 cut(s)	1953
BspLI	GGNNCC	1 cut(s)	251
BspPI	GGATC	1 cut(s)	2381
BspTNI	GGTCTC	1 cut(s)	1930
BsrBI	CCGCTC	1 cut(s)	219
BsrDI	GCAATG	3 cut(s)	996, 1101, 1206
BsrGI	TGTACA	1 cut(s)	2010
BssECI	CCNNGG	7 cut(s)	235, 245, 271, 767, 819, 1344, 1515
BssMI	GATC	2 cut(s)	604, 2386
BssT1I	CCWWGG	2 cut(s)	271, 767
Bst2UI	CCWGG	1 cut(s)	247
Bst4CI	ACNGT	6 cut(s)	260, 1617, 2015, 2104, 2265, 2429
Bst6I	CTCTTC	5 cut(s)	30, 797, 1314, 1427, 1689
BstAPI	GCANNNNNTGC	2 cut(s)	920, 2222
BstAUI	TGTACA	1 cut(s)	2010
BstBAI	YACGTR	1 cut(s)	939
BstC8I	GCNNGC	9 cut(s)	206, 221, 242, 450, 710, 1238, 1724, 1770, 2333
BstDSI	CCRYGG	2 cut(s)	235, 1515
BstF5I	GGATG	6 cut(s)	282, 406, 601, 961, 1195, 1401
BstFNI	CGCG	5 cut(s)	208, 223, 237, 947, 2379
BstHHI	GCGC	1 cut(s)	210
BstKTI	GATC	2 cut(s)	607, 2389
BstMAI	GTCTC	4 cut(s)	266, 975, 1930, 2133
BstMBI	GATC	2 cut(s)	604, 2386
BstMCI	CGRYCG	1 cut(s)	217
BstMWI	GCNNNNNNNGC	7 cut(s)	207, 216, 815, 920, 1583, 1592, 2222
BstNI	CCWGG	1 cut(s)	247
BstNSI	RCATGY	4 cut(s)	1335, 1726, 1772, 1838
BstSCI	CCNGG	6 cut(s)	245, 552, 809, 819, 1344, 2174
BstSLI	GKGCMC	1 cut(s)	1343
BstUI	CGCG	5 cut(s)	208, 223, 237, 947, 2379
BstV1I	GCAGC	5 cut(s)	871, 923, 1183, 1598, 2237
BstXI	CCANNNNNNTGG	1 cut(s)	2257
BstZI	CGGCCG	1 cut(s)	214
BsuI	GTATCC	1 cut(s)	1453
BsuRI	GGCC	4 cut(s)	216, 552, 1100, 1386
BtgI	CCRYGG	2 cut(s)	235, 1515
BtsCI	GGATG	6 cut(s)	282, 406, 601, 961, 1195, 1401
BtsIMutI	CAGTG	2 cut(s)	1486, 1883
BtuMI	TCGCGA	1 cut(s)	2379
Cac8I	GCNNGC	9 cut(s)	206, 221, 242, 450, 710, 1238, 1724, 1770, 2333
CciI	TCATGA	1 cut(s)	1953
CfoI	GCGC	1 cut(s)	210
Cfr13I	GGNCC	3 cut(s)	249, 550, 1099
Cfr42I	CCGCGG	1 cut(s)	238
CseI	GACGC	1 cut(s)	2150
Csp6I	GTAC	8 cut(s)	661, 762, 1251, 1448, 2011, 2261, 2266, 2326
CviQI	GTAC	8 cut(s)	661, 762, 1251, 1448, 2011, 2261, 2266, 2326
DpnI	GATC	2 cut(s)	606, 2388
DpnII	GATC	2 cut(s)	604, 2386
EaeI	YGGCCR	2 cut(s)	214, 1384
EagI	CGGCCG	1 cut(s)	214
Eam1104I	CTCTTC	5 cut(s)	30, 797, 1314, 1427, 1689
EarI	CTCTTC	5 cut(s)	30, 797, 1314, 1427, 1689
EclXI	CGGCCG	1 cut(s)	214
Eco130I	CCWWGG	2 cut(s)	271, 767
Eco31I	GGTCTC	1 cut(s)	1930
Eco32I	GATATC	1 cut(s)	1059
Eco47I	GGWCC	1 cut(s)	249
Eco52I	CGGCCG	1 cut(s)	214
Eco57I	CTGAAG	1 cut(s)	1758
Eco88I	CYCGRG	1 cut(s)	1596
EcoRII	CCWGG	1 cut(s)	245
EcoRV	GATATC	1 cut(s)	1059
EcoT14I	CCWWGG	2 cut(s)	271, 767
EcoT22I	ATGCAT	2 cut(s)	1333, 1728
ErhI	CCWWGG	2 cut(s)	271, 767
Esp3I	CGTCTC	2 cut(s)	266, 2133
FalI	AAGNNNNNCTT	2 cut(s)	50, 82
FaqI	GGGAC	1 cut(s)	235
FauI	CCCGC	1 cut(s)	855
Fnu4HI	GCNGC	9 cut(s)	202, 217, 238, 567, 885, 912, 1197, 1587, 2226
FokI	GGATG	6 cut(s)	269, 413, 608, 968, 1202, 1408
Fsp4HI	GCNGC	9 cut(s)	202, 217, 238, 567, 885, 912, 1197, 1587, 2226
FspBI	CTAG	7 cut(s)	287, 326, 347, 378, 648, 1977, 2423
GlaI	GCGC	1 cut(s)	209
GluI	GCNGC	9 cut(s)	202, 217, 238, 567, 885, 912, 1197, 1587, 2226
GsaI	CCCAGC	1 cut(s)	1185
GsuI	CTGGAG	1 cut(s)	2169
HaeIII	GGCC	4 cut(s)	216, 552, 1100, 1386
HapII	CCGG	6 cut(s)	553, 810, 821, 1346, 2081, 2175
HgaI	GACGC	1 cut(s)	2150
HhaI	GCGC	1 cut(s)	210
Hin6I	GCGC	1 cut(s)	208
HinP1I	GCGC	1 cut(s)	208
HincII	GTYRAC	1 cut(s)	2368
HindII	GTYRAC	1 cut(s)	2368
HinfI	GANTC	8 cut(s)	227, 290, 314, 386, 824, 1400, 1950, 2231
HpaII	CCGG	6 cut(s)	553, 810, 821, 1346, 2081, 2175
HphI	GGTGA	3 cut(s)	130, 297, 1860
Hpy166II	GTNNAC	4 cut(s)	587, 1296, 1341, 2368
Hpy188I	TCNGA	8 cut(s)	975, 1405, 1424, 1621, 1914, 2023, 2041, 2161
Hpy188III	TCNNGA	8 cut(s)	475, 608, 1167, 1270, 1316, 1954, 2186, 2378
Hpy8I	GTNNAC	4 cut(s)	587, 1296, 1341, 2368
Hpy99I	CGWCG	1 cut(s)	2404
HpyAV	CCTTC	6 cut(s)	73, 1171, 1180, 1849, 2062, 2384
HpyCH4III	ACNGT	6 cut(s)	260, 1617, 2015, 2104, 2265, 2429
HpyCH4IV	ACGT	1 cut(s)	938
HpyF10VI	GCNNNNNNNGC	7 cut(s)	207, 216, 815, 920, 1583, 1592, 2222
HpySE526I	ACGT	1 cut(s)	938
HspAI	GCGC	1 cut(s)	208
KspI	CCGCGG	1 cut(s)	238
Kzo9I	GATC	2 cut(s)	604, 2386
LmnI	GCTCC	1 cut(s)	1012
Lsp1109I	GCAGC	5 cut(s)	871, 923, 1183, 1598, 2237
LweI	GCATC	2 cut(s)	219, 1263
MaeI	CTAG	7 cut(s)	287, 326, 347, 378, 648, 1977, 2423
MaeII	ACGT	1 cut(s)	938
MaeIII	GTNAC	4 cut(s)	224, 934, 1354, 1967
MalI	GATC	2 cut(s)	606, 2388
MbiI	CCGCTC	1 cut(s)	219
MboI	GATC	2 cut(s)	604, 2386
MboII	GAAGA	9 cut(s)	17, 58, 814, 1331, 1444, 1654, 1676, 1751, 2036
MhlI	GDGCHC	1 cut(s)	1343
MlsI	TGGCCA	1 cut(s)	1386
MluCI	AATT	6 cut(s)	144, 440, 1048, 1548, 1758, 2088
MluI	ACGCGT	1 cut(s)	945
MluNI	TGGCCA	1 cut(s)	1386
MlyI	GAGTC	4 cut(s)	221, 284, 308, 1394
MmeI	TCCRAC	6 cut(s)	255, 933, 1065, 1803, 1892, 2019
Mox20I	TGGCCA	1 cut(s)	1386
Mph1103I	ATGCAT	2 cut(s)	1333, 1728
MroXI	GAANNNNTTC	2 cut(s)	336, 2046
MscI	TGGCCA	1 cut(s)	1386
MseI	TTAA	9 cut(s)	296, 417, 684, 1017, 1131, 1257, 1467, 1781, 2274
MslI	CAYNNNNRTG	6 cut(s)	363, 594, 1301, 1336, 2210, 2255
Msp20I	TGGCCA	1 cut(s)	1386
MspA1I	CMGCKG	1 cut(s)	237
MspI	CCGG	6 cut(s)	553, 810, 821, 1346, 2081, 2175
MspR9I	CCNGG	6 cut(s)	247, 554, 811, 821, 1346, 2176
Mva1269I	GAATGC	2 cut(s)	534, 1894
MvaI	CCWGG	1 cut(s)	247
MvnI	CGCG	5 cut(s)	208, 223, 237, 947, 2379
MwoI	GCNNNNNNNGC	7 cut(s)	207, 216, 815, 920, 1583, 1592, 2222
NciI	CCSGG	5 cut(s)	554, 811, 821, 1346, 2176
NdeII	GATC	2 cut(s)	604, 2386
NlaIV	GGNNCC	1 cut(s)	251
NmuCI	GTSAC	2 cut(s)	224, 934
NruI	TCGCGA	1 cut(s)	2379
NsiI	ATGCAT	2 cut(s)	1333, 1728
NspI	RCATGY	4 cut(s)	1335, 1726, 1772, 1838
OliI	CACNNNNGTG	1 cut(s)	2210
PaeI	GCATGC	2 cut(s)	1726, 1772
PaeR7I	CTCGAG	1 cut(s)	1596
PagI	TCATGA	1 cut(s)	1953
PcsI	WCGNNNNNNNCGW	1 cut(s)	944
PctI	GAATGC	2 cut(s)	534, 1894
PdmI	GAANNNNTTC	2 cut(s)	336, 2046
PfeI	GAWTC	4 cut(s)	386, 824, 1950, 2231
PflMI	CCANNNNNTGG	2 cut(s)	1117, 1516
PfoI	TCCNGGA	1 cut(s)	2174
PkrI	GCNGC	9 cut(s)	203, 218, 239, 568, 886, 913, 1198, 1588, 2227
PleI	GAGTC	4 cut(s)	221, 284, 308, 1394
PpsI	GAGTC	4 cut(s)	221, 284, 308, 1394
Ppu21I	YACGTR	1 cut(s)	939
PsiI	TTATAA	1 cut(s)	837
Psp6I	CCWGG	1 cut(s)	245
PspFI	CCCAGC	1 cut(s)	1181
PspGI	CCWGG	1 cut(s)	245
PspN4I	GGNNCC	1 cut(s)	251
PspPI	GGNCC	3 cut(s)	249, 550, 1099
PspXI	VCTCGAGB	1 cut(s)	1596
RruI	TCGCGA	1 cut(s)	2379
RsaI	GTAC	8 cut(s)	662, 763, 1252, 1449, 2012, 2262, 2267, 2327
RsaNI	GTAC	8 cut(s)	661, 762, 1251, 1448, 2011, 2261, 2266, 2326
RseI	CAYNNNNRTG	6 cut(s)	363, 594, 1301, 1336, 2210, 2255
SacII	CCGCGG	1 cut(s)	238
SaqAI	TTAA	9 cut(s)	296, 417, 684, 1017, 1131, 1257, 1467, 1781, 2274
SatI	GCNGC	9 cut(s)	202, 217, 238, 567, 885, 912, 1197, 1587, 2226
Sau3AI	GATC	2 cut(s)	604, 2386
Sau96I	GGNCC	3 cut(s)	249, 550, 1099
SchI	GAGTC	4 cut(s)	221, 284, 308, 1394
ScrFI	CCNGG	6 cut(s)	247, 554, 811, 821, 1346, 2176
SduI	GDGCHC	1 cut(s)	1343
SfaNI	GCATC	2 cut(s)	219, 1263
Sfr274I	CTCGAG	1 cut(s)	1596
Sfr303I	CCGCGG	1 cut(s)	238
SgrBI	CCGCGG	1 cut(s)	238
SinI	GGWCC	1 cut(s)	249
SlaI	CTCGAG	1 cut(s)	1596
SmiMI	CAYNNNNRTG	6 cut(s)	363, 594, 1301, 1336, 2210, 2255
SmlI	CTYRAG	1 cut(s)	1596
SmoI	CTYRAG	1 cut(s)	1596
SphI	GCATGC	2 cut(s)	1726, 1772
Sse9I	AATT	6 cut(s)	144, 440, 1048, 1548, 1758, 2088
SsiI	CCGC	8 cut(s)	202, 217, 235, 237, 567, 671, 862, 1766
SspMI	CTAG	7 cut(s)	287, 326, 347, 378, 648, 1977, 2423
StyD4I	CCNGG	6 cut(s)	245, 552, 809, 819, 1344, 2174
StyI	CCWWGG	2 cut(s)	271, 767
TaaI	ACNGT	6 cut(s)	260, 1617, 2015, 2104, 2265, 2429
TaiI	ACGT	1 cut(s)	941
TaqI	TCGA	4 cut(s)	444, 560, 1597, 2341
TasI	AATT	6 cut(s)	144, 440, 1048, 1548, 1758, 2088
TatI	WGTACW	1 cut(s)	2010
TauI	GCSGC	4 cut(s)	204, 219, 240, 569
TfiI	GAWTC	4 cut(s)	386, 824, 1950, 2231
Tru1I	TTAA	9 cut(s)	296, 417, 684, 1017, 1131, 1257, 1467, 1781, 2274
Tru9I	TTAA	9 cut(s)	296, 417, 684, 1017, 1131, 1257, 1467, 1781, 2274
TscAI	CASTG	2 cut(s)	1486, 1890
TseFI	GTSAC	2 cut(s)	224, 934
TseI	GCWGC	5 cut(s)	884, 911, 1196, 1586, 2225
Tsp45I	GTSAC	2 cut(s)	224, 934
TspGWI	ACGGA	2 cut(s)	1293, 2164
TspRI	CASTG	2 cut(s)	1486, 1890
Van91I	CCANNNNNTGG	2 cut(s)	1117, 1516
VneI	GTGCAC	1 cut(s)	1339
VpaK11BI	GGWCC	1 cut(s)	249
XapI	RAATTY	1 cut(s)	440
XceI	RCATGY	4 cut(s)	1335, 1726, 1772, 1838
XhoI	CTCGAG	1 cut(s)	1596
XmnI	GAANNNNTTC	2 cut(s)	336, 2046
XspI	CTAG	7 cut(s)	287, 326, 347, 378, 648, 1977, 2423
Zsp2I	ATGCAT	2 cut(s)	1333, 1728

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.