Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0011103

Physical Location & Seq

Genomic Coordinates Reverse (-)

1454131 .. 1457141

Gene Structure 3011 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G04940.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2013 bp

ATGGAAAGAAATGGTGGTCACTACACTGATAAGACGAGAGTGTTGGATATTAAACCATTGCGTACTCTAAGACCTGTGTTTCCCAGTGGAAATCAAGCTCCGCCTTTTGTGTGTGCTCCTCCTTTTGGACCATTTCCTCCTGGGTTCTCATCGTTTTATCCGTTTAGTTCGTCTCAAGCGAATCAGCACACACCAGATCTTAACCAAGCTCAGTATCCACCGCAACATCAGCAGCCTCAGAATCCACCACCGGTATATCAGCAGCAGCCTCCTCAGCATGCATCTGAGCCTTCGTTGGTTACTCCTTTAAGGTCATTTAGATCTCCTGATGTGTCTAATGGCAACGCGGAACTTGAGGGGTCAACTGTGAAAAGAAGGATCCCTAAAAAGCGTCCCATTTCTCGGCCTGAGAATATGAATTTCGAGAGTGGGATTAATGTGGCTGATAGAGAGAATGGCAATAGGGAGTTGGTGTTGAGTGTTCTTATGCGGTTTGATGCGTTAAGAAGAAGGTTTGCACAACTTGAGGATGCTAAGGAAGCAGTTAGTGGGATTATCAAACGCCCTGATTTGAAATCAGGATCTACTTGTATGGGCAGAGGGGTGCGGACAAACACCAAAAAAAGACCTGGTATTGTTCCTGGTGTTGAGATTGGGGACGTATTCTTCTTCAGGTTTGAGATGTGTTTGGTGGGGTTGCATTCTCCATCAATGGCTGGGATTGACTATCTGGTTGTCAAGGGAGAAACGGAAGAAGAACCTATCGCCACTAGCATTGTCTCATCTGGATATTATGATAATGACGAAGGTAATCCTGATGTTTTGATTTATACTGGTCAGGGTGGTAATGCTGATAAAGATAAGCAATCTTCTGACCAAAAGCTCGAAAGGGGTAATCTTGCCTTGGAGAAGAGCTTGCGTAGAGATAGTGCAGTTAGGGTAATAAGGGGCTTGAAAGAGGCTTCTCATAATGCTAAGATCTATATTTATGATGGACTCTATGAGATTAAAGAGTCATGGGTAGAGAAAGGAAAATCTGGACACAACACCTTCAAGTATAAACTAGTTAGAGCTCCTGGTCAACCGCCTGCATTTGCTTCATGGACTGCAATCCAGAAATGGAAGACGGGTGTGCCTTCAAGGCAAGGACTCATTCTTCCCGATATGACTTCCGGGGTTGAAAGCATACCTGTTTCACTTGTTAACGAAGTTGATACCGACAATGGGCCTGCTTATTTCACCTACTCCACAACTGTGAAATACTCAGAGTCGTTTAAGCTGATGCAGCCTTCTTTTGGATGTGATTGTGCCAACTTATGCAAACCAGGGAACTTGGATTGTCACTGCATAAGGAAAAATGGAGGTGACTTCCCCTACACCGGTAATGGAATTCTAGTTAGCCGAAAGCCTATGATATATGAATGCAGTCCATCTTGCCCGTGCTCGACTTGCAAAAACAAGGTGACTCAAATGGGAGTAAAAGTGAGGCTGGAAGTTTTCAAGACAGCGAATAGAGGATGGGGATTGCGGTCATGGGATGCTATTCGTGCTGGTTCTTTTATATGTATCTATGTAGGTGAGGCCAAAGACAAATCAAAGGTGCAGCAAACTATGGCTAATGATGATTATACTTTTGATACAACCAATGTGTATAACCCTTTCAAGTGGAACTACGAACCTGGCTTAGCAGACGAAGATGCTTGTGAAGAGATGTCTGAAGAATCTGAAATCCCGCTGCCACTGATAATCAGTGCTAAGAATGTTGGGAACGTTGCCCGATTCATGAATCATAGTTGCTCACCTAATGTTTTCTGGCAGCCGGTTAGTTATGAAAATAACAGTCAACTCTTTGTGCATGTGGCCTTCTTTGCCATTTCTCACATCCCTCCAATGACTGAGTTAACTTACGACTATGGAGTATCTAGACCAAGTGGGACTCAAAATGGCAATCCTTTATATGGCAAAAGGAAATGCTTCTGTGGATCAGCGTATTGCCGTGGCTCATTTGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000775 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006325 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008168 GO:0008213 GO:0008276 GO:0008361 GO:0009987 GO:0010468 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0019222 GO:0019538 GO:0032259 GO:0032501 GO:0032502 GO:0032535 GO:0036211 GO:0040029 GO:0042054 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0051276 GO:0060255 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0090066 GO:0098687 GO:0099402 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00260 ko00310 ko01100 ko04146 ko04211 map00260 map00310 map01100 map04146 map04211

Pfam Domains

Protein Families

AT_hook Pre-SET SAD_SRA SET

Protein Analysis

670

Amino Acids

74.47

Weight (kDa)

8.56

Isoelectric Point (pI)

46.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAD_SRA	PF02182	211 - 361	1.3e-52	SAD/SRA domain
Pre-SET	PF05033	391 - 487	7.5e-23	Pre-SET motif
SET	PF00856	506 - 639	8.6e-18	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011103)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04940 AT5G04940
fragaria_vesca	FvH4_6g24040
malus_domestica	MD02G1267300.v1.1 MD07G1051900.v1.1
prunus_persica	Prupe.2G055000_v2.0.a1 Prupe.2G069200_v2.0.a1 Prupe.7G185900_v2.0.a1
pyrus_communis	pycom02g22920 pycom07g04020
rosa_chinensis	RchiOBHm_Chr1g0330251
rosa_laevigata	RLG00000029815
rosa_multiflora	Rmu_sc0002485.1_g000001
rosa_roxburghii	Rroxscaffold_4G00320020
rosa_rugosa	Rorug01G0087900
rosa_samantha	Rh1AG106200 Rh1BG084600 Rh1CG102000 Rh1DG110000
rosa_wichuraiana	Rw1G008390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	347
AciI	CCGC	8 cut(s)	101, 221, 347, 490, 607, 1085, 1528, 1733
AclI	AACGTT	1 cut(s)	1770
AclWI	GGATC	4 cut(s)	373, 386, 589, 1990
AcsI	RAATTY	2 cut(s)	418, 1389
AcuI	CTGAAG	2 cut(s)	655, 1737
AfaI	GTAC	1 cut(s)	64
AfiI	CCNNNNNNNGG	6 cut(s)	125, 402, 1224, 1295, 1379, 1958
AgeI	ACCGGT	2 cut(s)	250, 1379
AgsI	TTSAA	7 cut(s)	574, 955, 1054, 1140, 1181, 1501, 1663
AhlI	ACTAGT	1 cut(s)	1063
AjnI	CCWGG	6 cut(s)	139, 628, 640, 1075, 1324, 1678
AleI	CACNNNNGTG	1 cut(s)	1253
AluBI	AGCT	6 cut(s)	98, 209, 883, 915, 1073, 1279
AluI	AGCT	6 cut(s)	98, 209, 883, 915, 1073, 1279
Alw21I	GWGCWC	3 cut(s)	118, 1075, 1445
Alw26I	GTCTC	2 cut(s)	177, 784
AlwI	GGATC	4 cut(s)	373, 386, 589, 1990
AoxI	GGCC	4 cut(s)	404, 1226, 1581, 1860
ApeKI	GCWGC	7 cut(s)	232, 262, 265, 1285, 1603, 1735, 1816
ApoI	RAATTY	2 cut(s)	418, 1389
AseI	ATTAAT	1 cut(s)	435
AsiGI	ACCGGT	2 cut(s)	250, 1379
Asp700I	GAANNNNTTC	1 cut(s)	1973
AspS9I	GGNCC	2 cut(s)	128, 1226
AsuC2I	CCSGG	1 cut(s)	1174
AsuHPI	GGTGA	5 cut(s)	1231, 1376, 1474, 1589, 1791
AvaII	GGWCC	1 cut(s)	128
BamHI	GGATCC	1 cut(s)	378
BanII	GRGCYC	1 cut(s)	1075
BbsI	GAAGAC	1 cut(s)	1130
Bbv12I	GWGCWC	3 cut(s)	118, 1075, 1445
BbvCI	CCTCAGC	1 cut(s)	273
BbvI	GCAGC	7 cut(s)	244, 274, 277, 1297, 1615, 1722, 1828
BccI	CCATC	4 cut(s)	715, 986, 1438, 1512
BceAI	ACGGC	1 cut(s)	1980
BciT130I	CCWGG	6 cut(s)	141, 630, 642, 1077, 1326, 1680
BciVI	GTATCC	1 cut(s)	225
BcnI	CCSGG	1 cut(s)	1174
BcoDI	GTCTC	2 cut(s)	177, 784
BcuI	ACTAGT	1 cut(s)	1063
BfaI	CTAG	4 cut(s)	771, 1064, 1394, 1923
BfuI	GTATCC	1 cut(s)	225
BglI	GCCNNNNNGGC	1 cut(s)	1141
BglII	AGATCT	3 cut(s)	196, 320, 978
BisI	GCNGC	7 cut(s)	233, 263, 266, 1286, 1604, 1736, 1817
BlpI	GCTNAGC	1 cut(s)	1684
BlsI	GCNGC	7 cut(s)	234, 264, 267, 1287, 1605, 1737, 1818
Bme1390I	CCNGG	7 cut(s)	141, 630, 642, 1077, 1174, 1326, 1680
Bme18I	GGWCC	1 cut(s)	128
BmgT120I	GGNCC	2 cut(s)	128, 1226
BmiI	GGNNCC	1 cut(s)	380
BmrFI	CCNGG	7 cut(s)	141, 630, 642, 1077, 1174, 1326, 1680
BmrI	ACTGGG	1 cut(s)	78
BmsI	GCATC	6 cut(s)	290, 487, 520, 1272, 1528, 1687
BmuI	ACTGGG	1 cut(s)	78
BpiI	GAAGAC	1 cut(s)	1130
Bpu10I	CCTNAGC	2 cut(s)	273, 534
Bpu1102I	GCTNAGC	1 cut(s)	1684
BpuEI	CTTGAG	3 cut(s)	159, 374, 545
BpuMI	CCSGG	1 cut(s)	1174
BsaJI	CCNNGG	5 cut(s)	140, 903, 1173, 1325, 1996
BsaWI	WCCGGW	2 cut(s)	250, 1379
BsaXI	ACNNNNNCTCC	4 cut(s)	458, 488, 1467, 1497
Bsc4I	CCNNNNNNNGG	6 cut(s)	125, 402, 1224, 1295, 1379, 1958
Bse118I	RCCGGY	3 cut(s)	250, 1379, 1819
Bse1I	ACTGG	2 cut(s)	84, 838
Bse3DI	GCAATG	1 cut(s)	56
BseBI	CCWGG	6 cut(s)	141, 630, 642, 1077, 1326, 1680
BseDI	CCNNGG	5 cut(s)	140, 903, 1173, 1325, 1996
BseGI	GGATG	5 cut(s)	535, 1304, 1523, 1543, 1881
BseLI	CCNNNNNNNGG	6 cut(s)	125, 402, 1224, 1295, 1379, 1958
BseMI	GCAATG	1 cut(s)	56
BseMII	CTCAG	7 cut(s)	224, 251, 276, 287, 399, 1278, 1887
BseNI	ACTGG	2 cut(s)	84, 838
BseRI	GAGGAG	2 cut(s)	108, 261
BseXI	GCAGC	7 cut(s)	244, 274, 277, 1297, 1615, 1722, 1828
BseYI	CCCAGC	1 cut(s)	716
BsgI	GTGCAG	2 cut(s)	951, 1622
Bsh1236I	CGCG	1 cut(s)	347
BshFI	GGCC	4 cut(s)	406, 1228, 1583, 1862
BshTI	ACCGGT	2 cut(s)	250, 1379
BsiHKAI	GWGCWC	3 cut(s)	118, 1075, 1445
BsiSI	CCGG	4 cut(s)	251, 1173, 1380, 1820
BslFI	GGGAC	3 cut(s)	378, 671, 1948
BslI	CCNNNNNNNGG	6 cut(s)	125, 402, 1224, 1295, 1379, 1958
BsmAI	GTCTC	2 cut(s)	177, 784
BsmBI	CGTCTC	1 cut(s)	177
BsmFI	GGGAC	3 cut(s)	378, 671, 1948
BsmI	GAATGC	2 cut(s)	700, 1427
BsnI	GGCC	4 cut(s)	406, 1228, 1583, 1862
Bsp1286I	GDGCHC	3 cut(s)	118, 1075, 1445
Bsp143I	GATC	6 cut(s)	196, 320, 378, 581, 978, 1982
Bsp1720I	GCTNAGC	1 cut(s)	1684
BspACI	CCGC	8 cut(s)	101, 221, 347, 490, 607, 1085, 1528, 1733
BspANI	GGCC	4 cut(s)	406, 1228, 1583, 1862
BspCNI	CTCAG	7 cut(s)	223, 250, 277, 286, 400, 1277, 1888
BspFNI	CGCG	1 cut(s)	347
BspHI	TCATGA	1 cut(s)	1782
BspLI	GGNNCC	1 cut(s)	380
BspPI	GGATC	4 cut(s)	373, 386, 589, 1990
BspQI	GCTCTTC	1 cut(s)	905
BsrDI	GCAATG	1 cut(s)	56
BsrFI	RCCGGY	3 cut(s)	250, 1379, 1819
BsrI	ACTGG	2 cut(s)	84, 838
BssAI	RCCGGY	3 cut(s)	250, 1379, 1819
BssECI	CCNNGG	5 cut(s)	140, 903, 1173, 1325, 1996
BssMI	GATC	6 cut(s)	196, 320, 378, 581, 978, 1982
BssT1I	CCWWGG	1 cut(s)	903
Bst2UI	CCWGG	6 cut(s)	141, 630, 642, 1077, 1326, 1680
Bst4CI	ACNGT	3 cut(s)	367, 1255, 1841
Bst6I	CTCTTC	2 cut(s)	905, 1701
BstC8I	GCNNGC	4 cut(s)	279, 917, 1089, 1230
BstDSI	CCRYGG	1 cut(s)	1996
BstF5I	GGATG	5 cut(s)	535, 1304, 1523, 1543, 1881
BstFNI	CGCG	1 cut(s)	347
BstKTI	GATC	6 cut(s)	199, 323, 381, 584, 981, 1985
BstMAI	GTCTC	2 cut(s)	177, 784
BstMBI	GATC	6 cut(s)	196, 320, 378, 581, 978, 1982
BstMWI	GCNNNNNNNGC	8 cut(s)	229, 274, 539, 1141, 1285, 1449, 1547, 1868
BstNI	CCWGG	6 cut(s)	141, 630, 642, 1077, 1326, 1680
BstNSI	RCATGY	2 cut(s)	281, 1859
BstSCI	CCNGG	7 cut(s)	139, 628, 640, 1075, 1172, 1324, 1678
BstUI	CGCG	1 cut(s)	347
BstV1I	GCAGC	7 cut(s)	244, 274, 277, 1297, 1615, 1722, 1828
BstV2I	GAAGAC	1 cut(s)	1130
BstX2I	RGATCY	5 cut(s)	196, 320, 378, 581, 978
BstYI	RGATCY	5 cut(s)	196, 320, 378, 581, 978
BsuI	GTATCC	1 cut(s)	225
BsuRI	GGCC	4 cut(s)	406, 1228, 1583, 1862
BtgI	CCRYGG	1 cut(s)	1996
BtsCI	GGATG	5 cut(s)	535, 1304, 1523, 1543, 1881
BtsI	GCAGTG	1 cut(s)	1342
BtsIMutI	CAGTG	5 cut(s)	24, 91, 1342, 1739, 1756
Cac8I	GCNNGC	4 cut(s)	279, 917, 1089, 1230
CciI	TCATGA	1 cut(s)	1782
Cfr10I	RCCGGY	3 cut(s)	250, 1379, 1819
Cfr13I	GGNCC	2 cut(s)	128, 1226
CseI	GACGC	1 cut(s)	380
CsiI	ACCWGGT	1 cut(s)	628
Csp6I	GTAC	1 cut(s)	63
CspAI	ACCGGT	2 cut(s)	250, 1379
CspCI	CAANNNNNGTGG	2 cut(s)	757, 792
CviAII	CATG	6 cut(s)	278, 1017, 1101, 1533, 1783, 1856
CviQI	GTAC	1 cut(s)	63
DpnI	GATC	6 cut(s)	198, 322, 380, 583, 980, 1984
DpnII	GATC	6 cut(s)	196, 320, 378, 581, 978, 1982
Eam1104I	CTCTTC	2 cut(s)	905, 1701
EarI	CTCTTC	2 cut(s)	905, 1701
EciI	GGCGGA	1 cut(s)	90
Ecl136II	GAGCTC	1 cut(s)	1073
Eco130I	CCWWGG	1 cut(s)	903
Eco24I	GRGCYC	1 cut(s)	1075
Eco47I	GGWCC	1 cut(s)	128
Eco53kI	GAGCTC	1 cut(s)	1073
Eco57I	CTGAAG	2 cut(s)	655, 1737
EcoICRI	GAGCTC	1 cut(s)	1073
EcoRI	GAATTC	1 cut(s)	1389
EcoRII	CCWGG	6 cut(s)	139, 628, 640, 1075, 1324, 1678
EcoT14I	CCWWGG	1 cut(s)	903
EcoT22I	ATGCAT	1 cut(s)	283
EcoT38I	GRGCYC	1 cut(s)	1075
ErhI	CCWWGG	1 cut(s)	903
Esp3I	CGTCTC	1 cut(s)	177
FaeI	CATG	6 cut(s)	281, 1020, 1104, 1536, 1786, 1859
FaqI	GGGAC	3 cut(s)	378, 671, 1948
FatI	CATG	6 cut(s)	277, 1016, 1100, 1532, 1782, 1855
FauI	CCCGC	1 cut(s)	1740
Fnu4HI	GCNGC	7 cut(s)	233, 263, 266, 1286, 1604, 1736, 1817
FokI	GGATG	5 cut(s)	542, 1311, 1530, 1550, 1868
FriOI	GRGCYC	1 cut(s)	1075
Fsp4HI	GCNGC	7 cut(s)	233, 263, 266, 1286, 1604, 1736, 1817
FspBI	CTAG	4 cut(s)	771, 1064, 1394, 1923
GluI	GCNGC	7 cut(s)	233, 263, 266, 1286, 1604, 1736, 1817
GsaI	CCCAGC	1 cut(s)	720
HaeIII	GGCC	4 cut(s)	406, 1228, 1583, 1862
HapII	CCGG	4 cut(s)	251, 1173, 1380, 1820
HgaI	GACGC	1 cut(s)	380
Hin1II	CATG	6 cut(s)	281, 1020, 1104, 1536, 1786, 1859
HincII	GTYRAC	5 cut(s)	363, 1082, 1204, 1844, 1902
HindII	GTYRAC	5 cut(s)	363, 1082, 1204, 1844, 1902
HpaI	GTTAAC	2 cut(s)	1204, 1902
HpaII	CCGG	4 cut(s)	251, 1173, 1380, 1820
HphI	GGTGA	5 cut(s)	1231, 1376, 1474, 1589, 1791
Hpy166II	GTNNAC	5 cut(s)	363, 1082, 1204, 1844, 1902
Hpy188I	TCNGA	6 cut(s)	240, 286, 874, 1267, 1717, 1726
Hpy8I	GTNNAC	5 cut(s)	363, 1082, 1204, 1844, 1902
HpyAV	CCTTC	8 cut(s)	300, 369, 504, 800, 1060, 1146, 1299, 1873
HpyCH4III	ACNGT	3 cut(s)	367, 1255, 1841
HpyCH4IV	ACGT	2 cut(s)	660, 1770
HpyF10VI	GCNNNNNNNGC	8 cut(s)	229, 274, 539, 1141, 1285, 1449, 1547, 1868
HpySE526I	ACGT	2 cut(s)	660, 1770
Hsp92II	CATG	6 cut(s)	281, 1020, 1104, 1536, 1786, 1859
KspAI	GTTAAC	2 cut(s)	1204, 1902
Kzo9I	GATC	6 cut(s)	196, 320, 378, 581, 978, 1982
LguI	GCTCTTC	1 cut(s)	905
LmnI	GCTCC	3 cut(s)	103, 121, 1078
Lsp1109I	GCAGC	7 cut(s)	244, 274, 277, 1297, 1615, 1722, 1828
LweI	GCATC	6 cut(s)	290, 487, 520, 1272, 1528, 1687
MabI	ACCWGGT	1 cut(s)	628
MaeI	CTAG	4 cut(s)	771, 1064, 1394, 1923
MaeII	ACGT	2 cut(s)	660, 1770
MaeIII	GTNAC	5 cut(s)	17, 298, 1340, 1364, 1462
MalI	GATC	6 cut(s)	198, 322, 380, 583, 980, 1984
MboI	GATC	6 cut(s)	196, 320, 378, 581, 978, 1982
MflI	RGATCY	5 cut(s)	196, 320, 378, 581, 978
MhlI	GDGCHC	3 cut(s)	118, 1075, 1445
MluCI	AATT	2 cut(s)	418, 1389
MlyI	GAGTC	6 cut(s)	990, 1022, 1143, 1277, 1459, 1930
MmeI	TCCRAC	1 cut(s)	24
Mph1103I	ATGCAT	1 cut(s)	283
MroXI	GAANNNNTTC	1 cut(s)	1973
MseI	TTAA	9 cut(s)	51, 201, 308, 435, 503, 1008, 1203, 1275, 1901
MslI	CAYNNNNRTG	2 cut(s)	1253, 2008
MspA1I	CMGCKG	1 cut(s)	1735
MspI	CCGG	4 cut(s)	251, 1173, 1380, 1820
MspR9I	CCNGG	7 cut(s)	141, 630, 642, 1077, 1174, 1326, 1680
Mva1269I	GAATGC	2 cut(s)	700, 1427
MvaI	CCWGG	6 cut(s)	141, 630, 642, 1077, 1326, 1680
MvnI	CGCG	1 cut(s)	347
MwoI	GCNNNNNNNGC	8 cut(s)	229, 274, 539, 1141, 1285, 1449, 1547, 1868
NciI	CCSGG	1 cut(s)	1174
NdeII	GATC	6 cut(s)	196, 320, 378, 581, 978, 1982
NlaIII	CATG	6 cut(s)	281, 1020, 1104, 1536, 1786, 1859
NlaIV	GGNNCC	1 cut(s)	380
NmeAIII	GCCGAG	1 cut(s)	382
NmuCI	GTSAC	4 cut(s)	17, 1340, 1364, 1462
NsiI	ATGCAT	1 cut(s)	283
NspI	RCATGY	2 cut(s)	281, 1859
OliI	CACNNNNGTG	1 cut(s)	1253
PaeI	GCATGC	1 cut(s)	281
PagI	TCATGA	1 cut(s)	1782
PciSI	GCTCTTC	1 cut(s)	905
PcsI	WCGNNNNNNNCGW	2 cut(s)	158, 176
PctI	GAATGC	2 cut(s)	700, 1427
PdmI	GAANNNNTTC	1 cut(s)	1973
PfeI	GAWTC	5 cut(s)	181, 241, 1721, 1779, 1786
PinAI	ACCGGT	2 cut(s)	250, 1379
PkrI	GCNGC	7 cut(s)	234, 264, 267, 1287, 1605, 1737, 1818
PleI	GAGTC	6 cut(s)	990, 1021, 1143, 1276, 1459, 1930
PpsI	GAGTC	6 cut(s)	990, 1021, 1143, 1276, 1459, 1930
PshBI	ATTAAT	1 cut(s)	435
Psp124BI	GAGCTC	1 cut(s)	1075
Psp1406I	AACGTT	1 cut(s)	1770
Psp6I	CCWGG	6 cut(s)	139, 628, 640, 1075, 1324, 1678
PspFI	CCCAGC	1 cut(s)	716
PspGI	CCWGG	6 cut(s)	139, 628, 640, 1075, 1324, 1678
PspN4I	GGNNCC	1 cut(s)	380
PspPI	GGNCC	2 cut(s)	128, 1226
PsuI	RGATCY	5 cut(s)	196, 320, 378, 581, 978
RsaI	GTAC	1 cut(s)	64
RsaNI	GTAC	1 cut(s)	63
RseI	CAYNNNNRTG	2 cut(s)	1253, 2008
SacI	GAGCTC	1 cut(s)	1075
SapI	GCTCTTC	1 cut(s)	905
SaqAI	TTAA	9 cut(s)	51, 201, 308, 435, 503, 1008, 1203, 1275, 1901
SatI	GCNGC	7 cut(s)	233, 263, 266, 1286, 1604, 1736, 1817
Sau3AI	GATC	6 cut(s)	196, 320, 378, 581, 978, 1982
Sau96I	GGNCC	2 cut(s)	128, 1226
SchI	GAGTC	6 cut(s)	990, 1022, 1143, 1277, 1459, 1930
ScrFI	CCNGG	7 cut(s)	141, 630, 642, 1077, 1174, 1326, 1680
SduI	GDGCHC	3 cut(s)	118, 1075, 1445
SexAI	ACCWGGT	1 cut(s)	628
SfaNI	GCATC	6 cut(s)	290, 487, 520, 1272, 1528, 1687
SinI	GGWCC	1 cut(s)	128
SmiMI	CAYNNNNRTG	2 cut(s)	1253, 2008
SmlI	CTYRAG	3 cut(s)	174, 353, 524
SmoI	CTYRAG	3 cut(s)	174, 353, 524
SpeI	ACTAGT	1 cut(s)	1063
SphI	GCATGC	1 cut(s)	281
Sse9I	AATT	2 cut(s)	418, 1389
SsiI	CCGC	8 cut(s)	101, 221, 347, 490, 607, 1085, 1528, 1733
SspMI	CTAG	4 cut(s)	771, 1064, 1394, 1923
SstI	GAGCTC	1 cut(s)	1075
StyD4I	CCNGG	7 cut(s)	139, 628, 640, 1075, 1172, 1324, 1678
StyI	CCWWGG	1 cut(s)	903
TaaI	ACNGT	3 cut(s)	367, 1255, 1841
TaiI	ACGT	2 cut(s)	663, 1773
TaqI	TCGA	3 cut(s)	423, 885, 1445
TasI	AATT	2 cut(s)	418, 1389
TfiI	GAWTC	5 cut(s)	181, 241, 1721, 1779, 1786
Tru1I	TTAA	9 cut(s)	51, 201, 308, 435, 503, 1008, 1203, 1275, 1901
Tru9I	TTAA	9 cut(s)	51, 201, 308, 435, 503, 1008, 1203, 1275, 1901
TscAI	CASTG	5 cut(s)	31, 91, 1349, 1746, 1756
TseFI	GTSAC	4 cut(s)	17, 1340, 1364, 1462
TseI	GCWGC	7 cut(s)	232, 262, 265, 1285, 1603, 1735, 1816
Tsp45I	GTSAC	4 cut(s)	17, 1340, 1364, 1462
TspDTI	ATGAA	6 cut(s)	431, 1089, 1434, 1771, 1799, 1845
TspGWI	ACGGA	2 cut(s)	150, 764
TspRI	CASTG	5 cut(s)	31, 91, 1349, 1746, 1756
VpaK11BI	GGWCC	1 cut(s)	128
VspI	ATTAAT	1 cut(s)	435
XapI	RAATTY	2 cut(s)	418, 1389
XbaI	TCTAGA	1 cut(s)	1922
XceI	RCATGY	2 cut(s)	281, 1859
XmnI	GAANNNNTTC	1 cut(s)	1973
XspI	CTAG	4 cut(s)	771, 1064, 1394, 1923
Zsp2I	ATGCAT	1 cut(s)	283

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.