Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0011103

Physical Location & Seq

Genomic Coordinates Forward (+)

18059817 .. 18062907

Gene Structure 3091 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g24040.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2106 bp

ATGGAACCTCTCAATGGTATTGATAAGTCGAGGGTTTTGGATGTGAAACCTCTGCGTACTCTGACGCCTGTGTTCCCAACCGGCGCTCAGGCCCCTAACTTTGGTTGCATGCCTCCCTTTGGCCATACCCCTAATGGGTTTTCGCCCTTTTTCCCATTTAGTGCACCACCACAAGCCCAAGCCACTCAACACTCACCTGATCTCAATCATGTGAATCCCCCCGCAATGCAAACACCAGCTGGTCCCATGCCGGCTCCACTTCGGTCATATAGAGCCCCCAACCCGTCTGGAGGACTGCCCCATGACTTTCCGGAGGAGTCCAATGGAGACAGGGAGTCGTCAATGGGCGATGAAGATGGGTATTTTGATGGTCATAAGGACGTGGCTGGGTCTAGTTCATCTCGGAAGAAGACCACCAGAGGTTCATATCGTAAGAAGGTTAGGAGAAATGGAGATGCTGATGCAGTAGTCTTAGGATCGAGCGTGAACTTTGTTTCTGTGATCAGTCCAGCTCAGCTGGAAGATGGTAACAGGGACTTGGTAAATTATGTACTCATGAATTTTGATGCGATCCGGAGAAGGATTTGCCAGATTGAAGATACCAAGGAAAAGAACACCGACTCCATTAAGCGTGCAGATTTAAAAGCTGGCAATATTGCAATGACCAAAAAGGTTCGAACAAACATGAGGAGGAGAATTGGACCTGTCCCCGGAGTTGAGATTGGGGACATTTTCTTTTTCCGAATGGAAATGTGTGTGGTGGGATTACATGCTCCATCAATGGCTGGTATTGATTACATGACTCTCAGGGGTGATTTGGAAAAAGATCCCATAGCCTTGAGCATTGTATCTTCAGGAGGCTATGAGGATGACACAGATAGCAGTGATGTATTGATATACAGTGGTCAGGGTGGAATTACTAACAGCAAAGATAAGCAGGTGGCTGTCACTGATCAGAAGCTTGAAAGGGGCAATCTCGCTCTTGAGAGAAGCTTGCAACGTGGCAATGAAGTAAGAGTGATTCGAGGGTTGAAAGATGATACTACTCCTAACTCCAAGGTCTATATCTATGATGGCCTCTACAAGATCCAAGAGTCATGGACAGAGAGGGGGAAATCTGGTGGCAATATGTTCAAGTACAAGCTAGTGAGGGTGTCTGGACAGCCTGATGCCTTTTCAGTTCTGCAAACAATCCGAAAGTGGAAGGATGGTTTTTCATCAAGGGCTGGACTTGTTCTTCCAGACCTCACTTCAGGTTCTGAACGAATACCTGTTTCCCTTGTAAATGAAGTTGATAACGAGAAGGGGCCTGCTTATTTCACGTATCTCCCTTCGCTCAAGTATTCCAAATCTTTCACTTTAACGCAGCCTAGTTTAGGTTGCAAATGCCGTAATGCATGCCTCCCAGGTGATATGAATTGCTCTTGCATTCAGAAAAATGAAGGTGAATTTCCTTACACTGGTAATGGGATTCTAGTCAGCCGTAAACAGTTGGTCTATGAATGTGGTGCCTCATGTCCATGCCCTCCTAACTGCAAGAACCGGGTATCCCAAAGTGGTGTAAAAGTGCGCTTGGAAGTGTTTAGGACAAAGGATAGGGGCTGGGGCCTACGGTCATGGGATCCTATTCGTGCTGGTGCTTTTATTTGCGAGTATGCTGGTGAAGTTATAGATGAAGCAAAATTCAAAAATAAAGGGGACGAAGGCGAAATTGATGAGTATGTTTTTGATACAAGGCGCAATTTTGACTCCTTCAAGTGGAATTATGAACCTGGCTTACTAGATGAGGAGAGTCCTAATGATTCTGTCGAGGCCTATAGCATCCCATATCCCCTGATCATAAGTGCCAAGAATGCTGGGAATGTTTCTCGTTTTATTAACCACAGTTGTTCACCAAATGTCTTTTGGCAACCAGTTCTGTATGAACAGAACAATCAGTCTTTTCTCCATATTGGGTTTTTTGCCATCAGACACATTCCCCCTTTGACAGAACTGACATATGATTACGGGGTTTCAATGTCTGGTGGAGCGGGCAATAACAATGGCCCCCATAGGAAAAAGAAATGCTTATGTGGATCCTCAAAATGCCGGGGTTATTTTGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000775 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006325 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008168 GO:0008213 GO:0008276 GO:0008361 GO:0009987 GO:0010468 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0019222 GO:0019538 GO:0032259 GO:0032501 GO:0032502 GO:0032535 GO:0036211 GO:0040029 GO:0042054 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0051276 GO:0060255 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0090066 GO:0098687 GO:0099402 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00260 ko00310 ko01100 ko04146 ko04211 map00260 map00310 map01100 map04146 map04211

Pfam Domains

Protein Families

Pre-SET SAD_SRA SET

Protein Analysis

702

Amino Acids

77.52

Weight (kDa)

8.49

Isoelectric Point (pI)

45.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAD_SRA	PF02182	232 - 388	2.5e-56	SAD/SRA domain
Pre-SET	PF05033	418 - 515	1.6e-24	Pre-SET motif
SET	PF00856	534 - 670	4.3e-22	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011103)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04940 AT5G04940
fragaria_vesca	FvH4_6g24040
malus_domestica	MD02G1267300.v1.1 MD07G1051900.v1.1
prunus_persica	Prupe.2G055000_v2.0.a1 Prupe.2G069200_v2.0.a1 Prupe.7G185900_v2.0.a1
pyrus_communis	pycom02g22920 pycom07g04020
rosa_chinensis	RchiOBHm_Chr1g0330251
rosa_laevigata	RLG00000029815
rosa_multiflora	Rmu_sc0002485.1_g000001
rosa_roxburghii	Rroxscaffold_4G00320020
rosa_rugosa	Rorug01G0087900
rosa_samantha	Rh1AG106200 Rh1BG084600 Rh1CG102000 Rh1DG110000
rosa_wichuraiana	Rw1G008390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	928
Acc36I	ACCTGC	1 cut(s)	928
AccB1I	GGYRCC	1 cut(s)	1508
AccBSI	CCGCTC	1 cut(s)	2030
AccIII	TCCGGA	2 cut(s)	310, 573
AciI	CCGC	2 cut(s)	222, 2030
AclWI	GGATC	8 cut(s)	484, 565, 821, 1081, 1616, 1629, 2070, 2083
AcoI	YGGCCR	1 cut(s)	121
AcsI	RAATTY	3 cut(s)	559, 1448, 1682
AcuI	CTGAAG	2 cut(s)	837, 1236
AcyI	GRCGYC	1 cut(s)	65
AfaI	GTAC	3 cut(s)	58, 552, 1139
AfiI	CCNNNNNNNGG	9 cut(s)	14, 101, 119, 135, 290, 710, 1376, 1460, 1758
AgsI	TTSAA	7 cut(s)	596, 965, 1033, 1135, 1687, 1756, 2016
AhdI	GACNNNNNGTC	1 cut(s)	334
AjiI	CACGTC	1 cut(s)	382
AjnI	CCWGG	2 cut(s)	1405, 1771
AloI	GAACNNNNNNTCC	4 cut(s)	605, 637, 1532, 1564
AluBI	AGCT	7 cut(s)	239, 512, 517, 647, 961, 993, 1144
AluI	AGCT	7 cut(s)	239, 512, 517, 647, 961, 993, 1144
Alw21I	GWGCWC	1 cut(s)	166
Alw26I	GTCTC	1 cut(s)	321
Alw44I	GTGCAC	1 cut(s)	162
AlwI	GGATC	8 cut(s)	484, 565, 821, 1081, 1616, 1629, 2070, 2083
AlwNI	CAGNNNCTG	1 cut(s)	1259
Aor13HI	TCCGGA	2 cut(s)	310, 573
AoxI	GGCC	7 cut(s)	90, 121, 1075, 1307, 1606, 1812, 2044
ApaLI	GTGCAC	1 cut(s)	162
ApeKI	GCWGC	1 cut(s)	1366
ApoI	RAATTY	3 cut(s)	559, 1448, 1682
AspLEI	GCGC	3 cut(s)	86, 1572, 1740
AspS9I	GGNCC	6 cut(s)	91, 242, 701, 1307, 1606, 2045
AsuC2I	CCSGG	3 cut(s)	711, 1544, 2090
AsuHPI	GGTGA	6 cut(s)	186, 824, 1421, 1457, 1673, 1884
AsuII	TTCGAA	1 cut(s)	676
AvaII	GGWCC	2 cut(s)	242, 701
BaeGI	GKGCMC	1 cut(s)	166
BalI	TGGCCA	1 cut(s)	123
BamHI	GGATCC	2 cut(s)	1621, 2075
BanI	GGYRCC	1 cut(s)	1508
BanII	GRGCYC	1 cut(s)	277
BbsI	GAAGAC	1 cut(s)	416
Bbv12I	GWGCWC	1 cut(s)	166
BbvI	GCAGC	1 cut(s)	1378
BccI	CCATC	7 cut(s)	350, 362, 518, 784, 1067, 1202, 1973
BceAI	ACGGC	2 cut(s)	1374, 1467
BciT130I	CCWGG	2 cut(s)	1407, 1773
BciVI	GTATCC	1 cut(s)	1558
BclI	TGATCA	3 cut(s)	501, 952, 1836
BcnI	CCSGG	3 cut(s)	711, 1544, 2090
BcoDI	GTCTC	1 cut(s)	321
BfaI	CTAG	5 cut(s)	393, 1145, 1371, 1475, 1781
BfmI	CTRYAG	1 cut(s)	1816
BfoI	RGCGCY	1 cut(s)	87
BfuAI	ACCTGC	1 cut(s)	928
BfuI	GTATCC	1 cut(s)	1558
BisI	GCNGC	1 cut(s)	1367
BlpI	GCTNAGC	1 cut(s)	513
BlsI	GCNGC	1 cut(s)	1368
Bme1390I	CCNGG	5 cut(s)	711, 1407, 1544, 1773, 2090
Bme18I	GGWCC	2 cut(s)	242, 701
BmeRI	GACNNNNNGTC	1 cut(s)	334
BmgBI	CACGTC	1 cut(s)	382
BmgT120I	GGNCC	6 cut(s)	91, 242, 701, 1307, 1606, 2045
BmrFI	CCNGG	5 cut(s)	711, 1407, 1544, 1773, 2090
BmsI	GCATC	5 cut(s)	445, 451, 556, 1159, 1830
BpiI	GAAGAC	1 cut(s)	416
BpmI	CTGGAG	1 cut(s)	309
Bpu10I	CCTNAGC	1 cut(s)	87
Bpu1102I	GCTNAGC	1 cut(s)	513
Bpu14I	TTCGAA	1 cut(s)	676
BpuEI	CTTGAG	3 cut(s)	859, 1004, 1322
BpuMI	CCSGG	3 cut(s)	711, 1544, 2090
BsaAI	YACGTR	1 cut(s)	1323
BsaBI	GATNNNNATC	1 cut(s)	204
BsaHI	GRCGYC	1 cut(s)	65
BsaJI	CCNNGG	5 cut(s)	603, 709, 1056, 1405, 2089
BsaWI	WCCGGW	2 cut(s)	310, 573
BsaXI	ACNNNNNCTCC	2 cut(s)	605, 635
Bsc4I	CCNNNNNNNGG	9 cut(s)	14, 101, 119, 135, 290, 710, 1376, 1460, 1758
Bse118I	RCCGGY	2 cut(s)	80, 250
Bse1I	ACTGG	2 cut(s)	1465, 1913
Bse3DI	GCAATG	3 cut(s)	231, 666, 1012
Bse8I	GATNNNNATC	1 cut(s)	204
BseAI	TCCGGA	2 cut(s)	310, 573
BseBI	CCWGG	2 cut(s)	1407, 1773
BseDI	CCNNGG	5 cut(s)	603, 709, 1056, 1405, 2089
BseGI	GGATG	4 cut(s)	46, 874, 1213, 1821
BseJI	GATNNNNATC	1 cut(s)	204
BseLI	CCNNNNNNNGG	9 cut(s)	14, 101, 119, 135, 290, 710, 1376, 1460, 1758
BseMI	GCAATG	3 cut(s)	231, 666, 1012
BseMII	CTCAG	3 cut(s)	101, 527, 820
BseNI	ACTGG	2 cut(s)	1465, 1913
BseRI	GAGGAG	4 cut(s)	329, 703, 706, 1802
BseSI	GKGCMC	1 cut(s)	166
BseXI	GCAGC	1 cut(s)	1378
BseYI	CCCAGC	3 cut(s)	386, 1602, 1856
BsgI	GTGCAG	1 cut(s)	654
BshFI	GGCC	7 cut(s)	92, 123, 1077, 1309, 1608, 1814, 2046
BshNI	GGYRCC	1 cut(s)	1508
BsiHKAI	GWGCWC	1 cut(s)	166
BsiSI	CCGG	7 cut(s)	81, 251, 311, 574, 711, 1543, 2089
BslFI	GGGAC	5 cut(s)	228, 548, 692, 740, 1712
BslI	CCNNNNNNNGG	9 cut(s)	14, 101, 119, 135, 290, 710, 1376, 1460, 1758
BsmAI	GTCTC	1 cut(s)	321
BsmFI	GGGAC	5 cut(s)	228, 548, 692, 740, 1712
BsmI	GAATGC	2 cut(s)	1428, 1858
BsnI	GGCC	7 cut(s)	92, 123, 1077, 1309, 1608, 1814, 2046
Bsp119I	TTCGAA	1 cut(s)	676
Bsp1286I	GDGCHC	2 cut(s)	166, 277
Bsp13I	TCCGGA	2 cut(s)	310, 573
Bsp1720I	GCTNAGC	1 cut(s)	513
BspACI	CCGC	2 cut(s)	222, 2030
BspANI	GGCC	7 cut(s)	92, 123, 1077, 1309, 1608, 1814, 2046
BspCNI	CTCAG	3 cut(s)	100, 526, 819
BspEI	TCCGGA	2 cut(s)	310, 573
BspHI	TCATGA	1 cut(s)	555
BspMI	ACCTGC	1 cut(s)	928
BspPI	GGATC	8 cut(s)	484, 565, 821, 1081, 1616, 1629, 2070, 2083
BspT104I	TTCGAA	1 cut(s)	676
BspT107I	GGYRCC	1 cut(s)	1508
BsrBI	CCGCTC	1 cut(s)	2030
BsrDI	GCAATG	3 cut(s)	231, 666, 1012
BsrFI	RCCGGY	2 cut(s)	80, 250
BsrI	ACTGG	2 cut(s)	1465, 1913
BssAI	RCCGGY	2 cut(s)	80, 250
BssECI	CCNNGG	5 cut(s)	603, 709, 1056, 1405, 2089
BssNI	GRCGYC	1 cut(s)	65
BssT1I	CCWWGG	2 cut(s)	603, 1056
Bst2UI	CCWGG	2 cut(s)	1407, 1773
Bst4CI	ACNGT	4 cut(s)	902, 1491, 1614, 1886
BstACI	GRCGYC	1 cut(s)	65
BstBAI	YACGTR	1 cut(s)	1323
BstBI	TTCGAA	1 cut(s)	676
BstC8I	GCNNGC	8 cut(s)	110, 252, 633, 649, 995, 1311, 1399, 2032
BstDEI	CTNAG	4 cut(s)	87, 472, 513, 806
BstENI	CCTNNNNNAGG	1 cut(s)	1374
BstF5I	GGATG	4 cut(s)	46, 874, 1213, 1821
BstH2I	RGCGCY	1 cut(s)	87
BstHHI	GCGC	3 cut(s)	86, 1572, 1740
BstMAI	GTCTC	1 cut(s)	321
BstMWI	GCNNNNNNNGC	1 cut(s)	1853
BstNI	CCWGG	2 cut(s)	1407, 1773
BstNSI	RCATGY	3 cut(s)	112, 773, 1401
BstSCI	CCNGG	5 cut(s)	709, 1405, 1542, 1771, 2088
BstSFI	CTRYAG	1 cut(s)	1816
BstSLI	GKGCMC	1 cut(s)	166
BstV1I	GCAGC	1 cut(s)	1378
BstV2I	GAAGAC	1 cut(s)	416
BstX2I	RGATCY	4 cut(s)	826, 1086, 1621, 2075
BstYI	RGATCY	4 cut(s)	826, 1086, 1621, 2075
BsuI	GTATCC	1 cut(s)	1558
BsuRI	GGCC	7 cut(s)	92, 123, 1077, 1309, 1608, 1814, 2046
BtgZI	GCGATG	1 cut(s)	363
BtrI	CACGTC	1 cut(s)	382
BtsCI	GGATG	4 cut(s)	46, 874, 1213, 1821
BtsI	GCAGTG	1 cut(s)	889
BtsIMutI	CAGTG	4 cut(s)	889, 907, 948, 1458
BveI	ACCTGC	1 cut(s)	928
Cac8I	GCNNGC	8 cut(s)	110, 252, 633, 649, 995, 1311, 1399, 2032
CaiI	CAGNNNCTG	1 cut(s)	1259
CciI	TCATGA	1 cut(s)	555
CfoI	GCGC	3 cut(s)	86, 1572, 1740
Cfr10I	RCCGGY	2 cut(s)	80, 250
Cfr13I	GGNCC	6 cut(s)	91, 242, 701, 1307, 1606, 2045
CseI	GACGC	1 cut(s)	73
Csp6I	GTAC	3 cut(s)	57, 551, 1138
CviQI	GTAC	3 cut(s)	57, 551, 1138
DdeI	CTNAG	4 cut(s)	87, 472, 513, 806
DraI	TTTAAA	1 cut(s)	642
DriI	GACNNNNNGTC	1 cut(s)	334
EaeI	YGGCCR	1 cut(s)	121
Eam1105I	GACNNNNNGTC	1 cut(s)	334
Eco130I	CCWWGG	2 cut(s)	603, 1056
Eco147I	AGGCCT	1 cut(s)	1814
Eco24I	GRGCYC	1 cut(s)	277
Eco47I	GGWCC	2 cut(s)	242, 701
Eco57I	CTGAAG	2 cut(s)	837, 1236
EcoNI	CCTNNNNNAGG	1 cut(s)	1374
EcoO109I	RGGNCCY	3 cut(s)	91, 1307, 1606
EcoRII	CCWGG	2 cut(s)	1405, 1771
EcoT14I	CCWWGG	2 cut(s)	603, 1056
EcoT22I	ATGCAT	1 cut(s)	1399
EcoT38I	GRGCYC	1 cut(s)	277
ErhI	CCWWGG	2 cut(s)	603, 1056
FalI	AAGNNNNNCTT	2 cut(s)	2051, 2083
FaqI	GGGAC	5 cut(s)	228, 548, 692, 740, 1712
FauI	CCCGC	2 cut(s)	229, 2023
FauNDI	CATATG	1 cut(s)	1999
FbaI	TGATCA	3 cut(s)	501, 952, 1836
Fnu4HI	GCNGC	1 cut(s)	1367
FokI	GGATG	4 cut(s)	53, 881, 1220, 1808
FriOI	GRGCYC	1 cut(s)	277
Fsp4HI	GCNGC	1 cut(s)	1367
FspBI	CTAG	5 cut(s)	393, 1145, 1371, 1475, 1781
GlaI	GCGC	3 cut(s)	85, 1571, 1739
GluI	GCNGC	1 cut(s)	1367
GsaI	CCCAGC	3 cut(s)	390, 1606, 1860
GsuI	CTGGAG	1 cut(s)	309
HaeII	RGCGCY	1 cut(s)	87
HaeIII	GGCC	7 cut(s)	92, 123, 1077, 1309, 1608, 1814, 2046
HapII	CCGG	7 cut(s)	81, 251, 311, 574, 711, 1543, 2089
HgaI	GACGC	1 cut(s)	73
HhaI	GCGC	3 cut(s)	86, 1572, 1740
Hin1I	GRCGYC	1 cut(s)	65
Hin6I	GCGC	3 cut(s)	84, 1570, 1738
HinP1I	GCGC	3 cut(s)	84, 1570, 1738
HindIII	AAGCTT	2 cut(s)	959, 991
HpaII	CCGG	7 cut(s)	81, 251, 311, 574, 711, 1543, 2089
HphI	GGTGA	6 cut(s)	186, 824, 1421, 1457, 1673, 1884
Hpy166II	GTNNAC	4 cut(s)	164, 487, 1487, 1892
Hpy188I	TCNGA	8 cut(s)	63, 405, 743, 957, 1196, 1261, 1434, 1970
Hpy188III	TCNNGA	8 cut(s)	288, 311, 556, 574, 855, 983, 1158, 1241
Hpy8I	GTNNAC	4 cut(s)	164, 487, 1487, 1892
HpyAV	CCTTC	8 cut(s)	430, 573, 1198, 1297, 1341, 1436, 1697, 1762
HpyCH4III	ACNGT	4 cut(s)	902, 1491, 1614, 1886
HpyCH4IV	ACGT	3 cut(s)	381, 1000, 1322
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1853
HpyF3I	CTNAG	4 cut(s)	87, 472, 513, 806
HpySE526I	ACGT	3 cut(s)	381, 1000, 1322
Hsp92I	GRCGYC	1 cut(s)	65
HspAI	GCGC	3 cut(s)	84, 1570, 1738
Kpn2I	TCCGGA	2 cut(s)	310, 573
KroI	GCCGGC	1 cut(s)	250
KroNI	GCCGGC	1 cut(s)	252
Ksp22I	TGATCA	3 cut(s)	501, 952, 1836
LmnI	GCTCC	3 cut(s)	259, 778, 2027
Lsp1109I	GCAGC	1 cut(s)	1378
LweI	GCATC	5 cut(s)	445, 451, 556, 1159, 1830
MaeI	CTAG	5 cut(s)	393, 1145, 1371, 1475, 1781
MaeII	ACGT	3 cut(s)	381, 1000, 1322
MaeIII	GTNAC	2 cut(s)	527, 946
MbiI	CCGCTC	1 cut(s)	2030
MboII	GAAGA	7 cut(s)	365, 418, 421, 533, 608, 843, 1229
MflI	RGATCY	4 cut(s)	826, 1086, 1621, 2075
MhlI	GDGCHC	2 cut(s)	166, 277
MlsI	TGGCCA	1 cut(s)	123
MluNI	TGGCCA	1 cut(s)	123
MlyI	GAGTC	7 cut(s)	326, 344, 614, 796, 1103, 1742, 1801
Mox20I	TGGCCA	1 cut(s)	123
Mph1103I	ATGCAT	1 cut(s)	1399
MroI	TCCGGA	2 cut(s)	310, 573
MroNI	GCCGGC	1 cut(s)	250
MscI	TGGCCA	1 cut(s)	123
MseI	TTAA	4 cut(s)	627, 641, 1361, 1878
MslI	CAYNNNNRTG	1 cut(s)	1519
Msp20I	TGGCCA	1 cut(s)	123
MspA1I	CMGCKG	2 cut(s)	239, 517
MspI	CCGG	7 cut(s)	81, 251, 311, 574, 711, 1543, 2089
MspR9I	CCNGG	5 cut(s)	711, 1407, 1544, 1773, 2090
Mva1269I	GAATGC	2 cut(s)	1428, 1858
MvaI	CCWGG	2 cut(s)	1407, 1773
MwoI	GCNNNNNNNGC	1 cut(s)	1853
NaeI	GCCGGC	1 cut(s)	252
NciI	CCSGG	3 cut(s)	711, 1544, 2090
NdeI	CATATG	1 cut(s)	1999
NgoMIV	GCCGGC	1 cut(s)	250
NmuCI	GTSAC	1 cut(s)	946
NsiI	ATGCAT	1 cut(s)	1399
NspI	RCATGY	3 cut(s)	112, 773, 1401
NspV	TTCGAA	1 cut(s)	676
PaeI	GCATGC	2 cut(s)	112, 1401
PagI	TCATGA	1 cut(s)	555
PaqCI	CACCTGC	1 cut(s)	928
PceI	AGGCCT	1 cut(s)	1814
PctI	GAATGC	2 cut(s)	1428, 1858
PdiI	GCCGGC	1 cut(s)	252
PfeI	GAWTC	4 cut(s)	214, 1021, 1471, 1802
PkrI	GCNGC	1 cut(s)	1368
PleI	GAGTC	7 cut(s)	325, 343, 614, 796, 1102, 1742, 1800
PpsI	GAGTC	7 cut(s)	325, 343, 614, 796, 1102, 1742, 1800
Ppu21I	YACGTR	1 cut(s)	1323
Psp6I	CCWGG	2 cut(s)	1405, 1771
PspFI	CCCAGC	3 cut(s)	386, 1602, 1856
PspGI	CCWGG	2 cut(s)	1405, 1771
PspPI	GGNCC	6 cut(s)	91, 242, 701, 1307, 1606, 2045
PsrI	GAACNNNNNNTAC	2 cut(s)	1761, 1793
PstNI	CAGNNNCTG	1 cut(s)	1259
PsuI	RGATCY	4 cut(s)	826, 1086, 1621, 2075
PvuII	CAGCTG	2 cut(s)	239, 517
RsaI	GTAC	3 cut(s)	58, 552, 1139
RsaNI	GTAC	3 cut(s)	57, 551, 1138
RseI	CAYNNNNRTG	1 cut(s)	1519
SaqAI	TTAA	4 cut(s)	627, 641, 1361, 1878
SatI	GCNGC	1 cut(s)	1367
Sau96I	GGNCC	6 cut(s)	91, 242, 701, 1307, 1606, 2045
SchI	GAGTC	7 cut(s)	326, 344, 614, 796, 1103, 1742, 1801
ScrFI	CCNGG	5 cut(s)	711, 1407, 1544, 1773, 2090
SduI	GDGCHC	2 cut(s)	166, 277
SfaNI	GCATC	5 cut(s)	445, 451, 556, 1159, 1830
SfcI	CTRYAG	1 cut(s)	1816
SfuI	TTCGAA	1 cut(s)	676
SinI	GGWCC	2 cut(s)	242, 701
SmiMI	CAYNNNNRTG	1 cut(s)	1519
SmlI	CTYRAG	3 cut(s)	838, 983, 1337
SmoI	CTYRAG	3 cut(s)	838, 983, 1337
SphI	GCATGC	2 cut(s)	112, 1401
SseBI	AGGCCT	1 cut(s)	1814
SsiI	CCGC	2 cut(s)	222, 2030
SspI	AATATT	1 cut(s)	655
SspMI	CTAG	5 cut(s)	393, 1145, 1371, 1475, 1781
StuI	AGGCCT	1 cut(s)	1814
StyD4I	CCNGG	5 cut(s)	709, 1405, 1542, 1771, 2088
StyI	CCWWGG	2 cut(s)	603, 1056
TaaI	ACNGT	4 cut(s)	902, 1491, 1614, 1886
TaiI	ACGT	3 cut(s)	384, 1003, 1325
TaqI	TCGA	5 cut(s)	29, 479, 676, 1024, 1809
TaqII	GACCGA	1 cut(s)	252
TatI	WGTACW	2 cut(s)	550, 1137
TfiI	GAWTC	4 cut(s)	214, 1021, 1471, 1802
Tru1I	TTAA	4 cut(s)	627, 641, 1361, 1878
Tru9I	TTAA	4 cut(s)	627, 641, 1361, 1878
TscAI	CASTG	4 cut(s)	889, 907, 955, 1465
TseFI	GTSAC	1 cut(s)	946
TseI	GCWGC	1 cut(s)	1366
Tsp45I	GTSAC	1 cut(s)	946
TspRI	CASTG	4 cut(s)	889, 907, 955, 1465
VneI	GTGCAC	1 cut(s)	162
VpaK11BI	GGWCC	2 cut(s)	242, 701
XagI	CCTNNNNNAGG	1 cut(s)	1374
XapI	RAATTY	3 cut(s)	559, 1448, 1682
XceI	RCATGY	3 cut(s)	112, 773, 1401
XcmI	CCANNNNNNNNNTGG	2 cut(s)	131, 1902
XspI	CTAG	5 cut(s)	393, 1145, 1371, 1475, 1781
Zsp2I	ATGCAT	1 cut(s)	1399

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.