Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0011103

Physical Location & Seq

Genomic Coordinates Forward (+)

18113153 .. 18115283

Gene Structure 2131 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G008390.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2052 bp

ATGGAATCTCTGAATGGTATTGATAAGTCAAGGGTTTTGGATGTTAAACCTCTGCGTACTTTGATGCCGGTGTTCCCAACCGGCGCTCAGGCCCCTAACTTTGGCTGCATGCCTCCCTTTGGGCATACCCCTAATGGGTTCTCTCCATTTTTCCCATTTAGTGCACCACCACAGGCCACTCAACAGTCACCTGATCTCAATCATGTGAGTCCTCCCGGAATGCAAACACCAGCTGGTCACATGCCGGCTCCACTTCGGTCGTATAGAGCCCCGAACCCATCTGGAGCACTGCCCCATGACTTTCCGGAGGATTCCAACGGAGACGGGGAGTCGTCAATGGGTGGGACGGCCAATGAAGATGGGTATTTTGATGGTCATAAGGACGTGGCTCCTCATCGTGGTTCTAGTTCATCTCGAAAGAAGACCAACAGAGCTAGTTCATCTCGAAAGAAGGTTAAGAAAAGTGGAGACGCTGATGCATTGATCTTTGTTGGAAACAAAGGATCGAGCGTGAACTTTGTTTCTTTGATCAGTCCAGTTCAACTAGAAGATGGTAACAGGGAGTTGGTTAATTATGTACTCATGAATTTTGATGCACTCCGGAGAAGGATCTGCCAGATTGAAGATACCAAGGAAAAGAACACCGACACTATTAAGCGTGCAGATTTAAAAGCTGGTAATATTGCAATGACCAAAAAGGTTCGAACAAACATGAGGAGGAGAATTGGAGTTGTCCCTGGAGTTGAGATTGGGGACATTTTCTTTTTCAGAATGGAAATGTGTGTGGTGGGATTACATGCTCCATCAATGGCTGGTATTGATTACATGACTCTCAAGGGTGATTTGGAAAAAGATCCCATAGCCTTGAGCATTGTTTCTTCAGGAGGCTACGAGATGAAACAGATAGCAGTGATGGGTAATCTTGCTCTTGAGAGAAGCTTGCAACGTGGCAATGAAGTAAGAGTGATTCGAGGGTTGAAAGATGATACTACTCTTAATTCCAAGGTCTATGTCTATGATGGCCTCTACAAAATCCAAGAGTCATGGACGGAGAGGGGAAAATCTGGTGGCAATATGTTCAAGTACAAGTTAGTGAGGGTGCCTGGACAGCCTGATGCCTTTTCAGTTCTGCAAACAATCCGAAAGTGGAAGGACGGTTTATCATCGAGGGCTGGACTTGTTCTTCCAGACCTCACTTCAGGGGCTGAACGTATACCTGTTTCCCTTGTAAATGAAGTTGATAACGAGAAGGGGCCTGCTTATTTCACGTATTTCCCTTCGCTCAAGTATTCTAAATCTTTCACTTTAACACAGCCTTCTCTCGGTTGCAAATGCCGTAGTGCATGCCTCCCAGGTGATATGAATTGCTCTTGCATTCAGAAAAATGAAGGTGAATTTCCTTACACTGGTAATGGGATTCTAGTCAGCCGTAAACAGTTGGTGCATGAATGTGGTGCTACATGTTCATGCCCTCCTAACTGCAAAAACCGGGTATCCCAAAGTGGTGTAAAAGTGCGCTTGGAAGTGTTTAGGACAAAGGATAGGGGCTGGGGCCTACGGTCATGGGATTCTATTCGTGCTGGTACTTTTATTTGTGAGTATGCTGGTGAAGTTATAGATGAAGTGAAATTCAAAAATAAAGGGGATGAAGGTGAAACTGATGACTATATTTTTGATACAAGGCGCGATTATGACTCCTTTAAGTGGAATTATGAACCTGGCTTACTAGATGAGGATAGTCCTAATGATTCTGTTGAGGATTATAGCATCCCATATCCCCTTATCATAAGTGCCAAGAATGCTGGGAATGTAGCTCGATTCATCAATCACGGTTGTTCACCAAATGTTTTTTGGCAACCAGTTCTATATGAACAGAACAATCAGTCTTTTCTCCATATTGCTTTTTTTGCCATCAGACACATTCCCCCTTTGACAGAACTGACATATGATTATGGGATTTCAATGTCTGATGAAGCGGCCAATAACAATGGCCTCCATAGGAAAAAGAAATGTTTATGTGGATCCTCCAAATGCCGGGGTTATTTTGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000775 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006325 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008168 GO:0008213 GO:0008276 GO:0008361 GO:0009987 GO:0010468 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0019222 GO:0019538 GO:0032259 GO:0032501 GO:0032502 GO:0032535 GO:0036211 GO:0040029 GO:0042054 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0051276 GO:0060255 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0090066 GO:0098687 GO:0099402 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00260 ko00310 ko01100 ko04146 ko04211 map00260 map00310 map01100 map04146 map04211

Pfam Domains

Protein Families

Pre-SET SAD_SRA SET

Protein Analysis

683

Amino Acids

75.62

Weight (kDa)

8.64

Isoelectric Point (pI)

47.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SAD_SRA	PF02182	242 - 300	7.7e-16	SAD/SRA domain
SAD_SRA	PF02182	303 - 370	1.9e-20	SAD/SRA domain
Pre-SET	PF05033	400 - 497	5.9e-24	Pre-SET motif
SET	PF00856	516 - 652	2.3e-21	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011103)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04940 AT5G04940
fragaria_vesca	FvH4_6g24040
malus_domestica	MD02G1267300.v1.1 MD07G1051900.v1.1
prunus_persica	Prupe.2G055000_v2.0.a1 Prupe.2G069200_v2.0.a1 Prupe.7G185900_v2.0.a1
pyrus_communis	pycom02g22920 pycom07g04020
rosa_chinensis	RchiOBHm_Chr1g0330251
rosa_laevigata	RLG00000029815
rosa_multiflora	Rmu_sc0002485.1_g000001
rosa_roxburghii	Rroxscaffold_4G00320020
rosa_rugosa	Rorug01G0087900
rosa_samantha	Rh1AG106200 Rh1BG084600 Rh1CG102000 Rh1DG110000
rosa_wichuraiana	Rw1G008390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1099
AccI	GTMKAC	1 cut(s)	1213
AccII	CGCG	1 cut(s)	1686
AccIII	TCCGGA	2 cut(s)	304, 600
AciI	CCGC	1 cut(s)	1976
AclWI	GGATC	5 cut(s)	511, 617, 848, 2016, 2029
AcoI	YGGCCR	2 cut(s)	348, 1977
AcsI	RAATTY	3 cut(s)	586, 1394, 1628
AcuI	CTGAAG	2 cut(s)	864, 1182
AfaI	GTAC	4 cut(s)	58, 579, 1085, 1585
AfiI	CCNNNNNNNGG	8 cut(s)	101, 119, 135, 398, 1322, 1406, 1704, 2034
AflIII	ACRYGT	1 cut(s)	1460
AgsI	TTSAA	6 cut(s)	542, 623, 979, 1081, 1633, 1962
AhdI	GACNNNNNGTC	1 cut(s)	328
AjiI	CACGTC	1 cut(s)	385
AjnI	CCWGG	4 cut(s)	736, 1102, 1351, 1717
AluBI	AGCT	5 cut(s)	233, 434, 674, 939, 1814
AluI	AGCT	5 cut(s)	233, 434, 674, 939, 1814
Alw21I	GWGCWC	2 cut(s)	166, 289
Alw26I	GTCTC	2 cut(s)	315, 462
Alw44I	GTGCAC	1 cut(s)	162
AlwI	GGATC	5 cut(s)	511, 617, 848, 2016, 2029
AlwNI	CAGNNNCTG	1 cut(s)	1205
Aor13HI	TCCGGA	2 cut(s)	304, 600
AoxI	GGCC	8 cut(s)	90, 174, 348, 1021, 1253, 1552, 1977, 1990
ApaLI	GTGCAC	1 cut(s)	162
ApeKI	GCWGC	1 cut(s)	105
ApoI	RAATTY	3 cut(s)	586, 1394, 1628
ArsI	GACNNNNNNTTYG	2 cut(s)	1655, 1687
AspLEI	GCGC	3 cut(s)	86, 1518, 1686
AspS9I	GGNCC	3 cut(s)	91, 1253, 1552
AsuC2I	CCSGG	3 cut(s)	216, 1490, 2036
AsuHPI	GGTGA	7 cut(s)	180, 851, 1367, 1403, 1619, 1664, 1830
AsuII	TTCGAA	1 cut(s)	703
BaeGI	GKGCMC	1 cut(s)	166
BamHI	GGATCC	1 cut(s)	2021
BanI	GGYRCC	1 cut(s)	1099
BanII	GRGCYC	1 cut(s)	271
BbsI	GAAGAC	1 cut(s)	428
Bbv12I	GWGCWC	2 cut(s)	166, 289
BbvI	GCAGC	1 cut(s)	92
BccI	CCATC	8 cut(s)	286, 353, 365, 545, 811, 907, 1013, 1919
BceAI	ACGGC	3 cut(s)	363, 1320, 1413
BciT130I	CCWGG	4 cut(s)	738, 1104, 1353, 1719
BciVI	GTATCC	1 cut(s)	1504
BclI	TGATCA	1 cut(s)	528
BcnI	CCSGG	3 cut(s)	216, 1490, 2036
BcoDI	GTCTC	2 cut(s)	315, 462
BfaI	CTAG	5 cut(s)	405, 435, 545, 1421, 1727
BfoI	RGCGCY	1 cut(s)	87
BfuI	GTATCC	1 cut(s)	1504
BisI	GCNGC	2 cut(s)	106, 1977
BlsI	GCNGC	2 cut(s)	107, 1978
Bme1390I	CCNGG	7 cut(s)	216, 738, 1104, 1353, 1490, 1719, 2036
BmeRI	GACNNNNNGTC	1 cut(s)	328
BmgBI	CACGTC	1 cut(s)	385
BmgT120I	GGNCC	3 cut(s)	91, 1253, 1552
BmiI	GGNNCC	7 cut(s)	93, 249, 390, 1101, 1254, 1553, 2023
BmrFI	CCNGG	7 cut(s)	216, 738, 1104, 1353, 1490, 1719, 2036
BmsI	GCATC	5 cut(s)	54, 466, 583, 1105, 1776
BpiI	GAAGAC	1 cut(s)	428
BpmI	CTGGAG	2 cut(s)	303, 759
Bpu10I	CCTNAGC	1 cut(s)	87
Bpu14I	TTCGAA	1 cut(s)	703
BpuEI	CTTGAG	4 cut(s)	818, 886, 950, 1268
BpuMI	CCSGG	3 cut(s)	216, 1490, 2036
BsaAI	YACGTR	1 cut(s)	1269
BsaBI	GATNNNNATC	1 cut(s)	198
BsaJI	CCNNGG	5 cut(s)	630, 736, 1002, 1351, 2035
BsaWI	WCCGGW	2 cut(s)	304, 600
Bsc4I	CCNNNNNNNGG	8 cut(s)	101, 119, 135, 398, 1322, 1406, 1704, 2034
Bse118I	RCCGGY	3 cut(s)	67, 80, 244
Bse1I	ACTGG	3 cut(s)	536, 1411, 1859
Bse3DI	GCAATG	2 cut(s)	693, 958
Bse8I	GATNNNNATC	1 cut(s)	198
BseAI	TCCGGA	2 cut(s)	304, 600
BseBI	CCWGG	4 cut(s)	738, 1104, 1353, 1719
BseDI	CCNNGG	5 cut(s)	630, 736, 1002, 1351, 2035
BseGI	GGATG	3 cut(s)	46, 1651, 1767
BseJI	GATNNNNATC	1 cut(s)	198
BseLI	CCNNNNNNNGG	8 cut(s)	101, 119, 135, 398, 1322, 1406, 1704, 2034
BseMI	GCAATG	2 cut(s)	693, 958
BseMII	CTCAG	1 cut(s)	101
BseNI	ACTGG	3 cut(s)	536, 1411, 1859
BseRI	GAGGAG	3 cut(s)	381, 730, 733
BseSI	GKGCMC	1 cut(s)	166
BseXI	GCAGC	1 cut(s)	92
BseYI	CCCAGC	2 cut(s)	1548, 1802
BsgI	GTGCAG	1 cut(s)	681
Bsh1236I	CGCG	1 cut(s)	1686
Bsh1285I	CGRYCG	1 cut(s)	260
BshFI	GGCC	8 cut(s)	92, 176, 350, 1023, 1255, 1554, 1979, 1992
BshNI	GGYRCC	1 cut(s)	1099
BsiEI	CGRYCG	1 cut(s)	260
BsiHKAI	GWGCWC	2 cut(s)	166, 289
BsiSI	CCGG	8 cut(s)	68, 81, 216, 245, 305, 601, 1489, 2035
BslFI	GGGAC	3 cut(s)	358, 719, 767
BslI	CCNNNNNNNGG	8 cut(s)	101, 119, 135, 398, 1322, 1406, 1704, 2034
BsmAI	GTCTC	2 cut(s)	315, 462
BsmBI	CGTCTC	2 cut(s)	315, 462
BsmFI	GGGAC	3 cut(s)	358, 719, 767
BsmI	GAATGC	3 cut(s)	225, 1374, 1804
BsnI	GGCC	8 cut(s)	92, 176, 350, 1023, 1255, 1554, 1979, 1992
Bsp119I	TTCGAA	1 cut(s)	703
Bsp1286I	GDGCHC	3 cut(s)	166, 271, 289
Bsp13I	TCCGGA	2 cut(s)	304, 600
Bsp143I	GATC	7 cut(s)	193, 483, 503, 528, 609, 853, 2021
BspACI	CCGC	1 cut(s)	1976
BspANI	GGCC	8 cut(s)	92, 176, 350, 1023, 1255, 1554, 1979, 1992
BspCNI	CTCAG	1 cut(s)	100
BspEI	TCCGGA	2 cut(s)	304, 600
BspFNI	CGCG	1 cut(s)	1686
BspHI	TCATGA	1 cut(s)	582
BspLI	GGNNCC	7 cut(s)	93, 249, 390, 1101, 1254, 1553, 2023
BspPI	GGATC	5 cut(s)	511, 617, 848, 2016, 2029
BspT104I	TTCGAA	1 cut(s)	703
BspT107I	GGYRCC	1 cut(s)	1099
BsrDI	GCAATG	2 cut(s)	693, 958
BsrFI	RCCGGY	3 cut(s)	67, 80, 244
BsrI	ACTGG	3 cut(s)	536, 1411, 1859
BssAI	RCCGGY	3 cut(s)	67, 80, 244
BssECI	CCNNGG	5 cut(s)	630, 736, 1002, 1351, 2035
BssMI	GATC	7 cut(s)	193, 483, 503, 528, 609, 853, 2021
BssNAI	GTATAC	1 cut(s)	1214
BssT1I	CCWWGG	2 cut(s)	630, 1002
Bst1107I	GTATAC	1 cut(s)	1214
Bst2UI	CCWGG	4 cut(s)	738, 1104, 1353, 1719
Bst4CI	ACNGT	5 cut(s)	186, 1157, 1437, 1560, 1832
BstBAI	YACGTR	1 cut(s)	1269
BstBI	TTCGAA	1 cut(s)	703
BstC8I	GCNNGC	6 cut(s)	110, 246, 660, 941, 1257, 1345
BstDEI	CTNAG	1 cut(s)	87
BstF5I	GGATG	3 cut(s)	46, 1651, 1767
BstFNI	CGCG	1 cut(s)	1686
BstH2I	RGCGCY	1 cut(s)	87
BstHHI	GCGC	3 cut(s)	86, 1518, 1686
BstKTI	GATC	7 cut(s)	196, 486, 506, 531, 612, 856, 2024
BstMAI	GTCTC	2 cut(s)	315, 462
BstMBI	GATC	7 cut(s)	193, 483, 503, 528, 609, 853, 2021
BstMCI	CGRYCG	1 cut(s)	260
BstMWI	GCNNNNNNNGC	3 cut(s)	1108, 1799, 1907
BstNI	CCWGG	4 cut(s)	738, 1104, 1353, 1719
BstNSI	RCATGY	5 cut(s)	112, 244, 800, 1347, 1464
BstSCI	CCNGG	7 cut(s)	214, 736, 1102, 1351, 1488, 1717, 2034
BstSLI	GKGCMC	1 cut(s)	166
BstUI	CGCG	1 cut(s)	1686
BstV1I	GCAGC	1 cut(s)	92
BstV2I	GAAGAC	1 cut(s)	428
BstX2I	RGATCY	3 cut(s)	609, 853, 2021
BstYI	RGATCY	3 cut(s)	609, 853, 2021
BstZ17I	GTATAC	1 cut(s)	1214
BsuI	GTATCC	1 cut(s)	1504
BsuRI	GGCC	8 cut(s)	92, 176, 350, 1023, 1255, 1554, 1979, 1992
BtrI	CACGTC	1 cut(s)	385
BtsCI	GGATG	3 cut(s)	46, 1651, 1767
BtsI	GCAGTG	2 cut(s)	287, 915
BtsIMutI	CAGTG	3 cut(s)	287, 915, 1404
Cac8I	GCNNGC	6 cut(s)	110, 246, 660, 941, 1257, 1345
CaiI	CAGNNNCTG	1 cut(s)	1205
CciI	TCATGA	1 cut(s)	582
CfoI	GCGC	3 cut(s)	86, 1518, 1686
Cfr10I	RCCGGY	3 cut(s)	67, 80, 244
Cfr13I	GGNCC	3 cut(s)	91, 1253, 1552
CseI	GACGC	1 cut(s)	479
Csp6I	GTAC	4 cut(s)	57, 578, 1084, 1584
CviQI	GTAC	4 cut(s)	57, 578, 1084, 1584
DdeI	CTNAG	1 cut(s)	87
DpnI	GATC	7 cut(s)	195, 485, 505, 530, 611, 855, 2023
DpnII	GATC	7 cut(s)	193, 483, 503, 528, 609, 853, 2021
DraI	TTTAAA	1 cut(s)	669
DriI	GACNNNNNGTC	1 cut(s)	328
EaeI	YGGCCR	2 cut(s)	348, 1977
Eam1105I	GACNNNNNGTC	1 cut(s)	328
Eco130I	CCWWGG	2 cut(s)	630, 1002
Eco24I	GRGCYC	1 cut(s)	271
Eco57I	CTGAAG	2 cut(s)	864, 1182
EcoO109I	RGGNCCY	3 cut(s)	91, 1253, 1552
EcoRII	CCWGG	4 cut(s)	736, 1102, 1351, 1717
EcoT14I	CCWWGG	2 cut(s)	630, 1002
EcoT22I	ATGCAT	1 cut(s)	481
EcoT38I	GRGCYC	1 cut(s)	271
ErhI	CCWWGG	2 cut(s)	630, 1002
Esp3I	CGTCTC	2 cut(s)	315, 462
FaqI	GGGAC	3 cut(s)	358, 719, 767
FauNDI	CATATG	1 cut(s)	1945
FbaI	TGATCA	1 cut(s)	528
FblI	GTMKAC	1 cut(s)	1213
Fnu4HI	GCNGC	2 cut(s)	106, 1977
FokI	GGATG	3 cut(s)	53, 1658, 1754
FriOI	GRGCYC	1 cut(s)	271
Fsp4HI	GCNGC	2 cut(s)	106, 1977
FspBI	CTAG	5 cut(s)	405, 435, 545, 1421, 1727
GlaI	GCGC	3 cut(s)	85, 1517, 1685
GluI	GCNGC	2 cut(s)	106, 1977
GsaI	CCCAGC	2 cut(s)	1552, 1806
GsuI	CTGGAG	2 cut(s)	303, 759
HaeII	RGCGCY	1 cut(s)	87
HaeIII	GGCC	8 cut(s)	92, 176, 350, 1023, 1255, 1554, 1979, 1992
HapII	CCGG	8 cut(s)	68, 81, 216, 245, 305, 601, 1489, 2035
HgaI	GACGC	1 cut(s)	479
HhaI	GCGC	3 cut(s)	86, 1518, 1686
Hin6I	GCGC	3 cut(s)	84, 1516, 1684
HinP1I	GCGC	3 cut(s)	84, 1516, 1684
HindIII	AAGCTT	1 cut(s)	937
HpaII	CCGG	8 cut(s)	68, 81, 216, 245, 305, 601, 1489, 2035
HphI	GGTGA	7 cut(s)	180, 851, 1367, 1403, 1619, 1664, 1830
Hpy166II	GTNNAC	5 cut(s)	164, 514, 1214, 1433, 1838
Hpy188I	TCNGA	6 cut(s)	12, 770, 1142, 1380, 1916, 1969
Hpy188III	TCNNGA	9 cut(s)	282, 305, 414, 444, 583, 601, 882, 929, 1187
Hpy8I	GTNNAC	5 cut(s)	164, 514, 1214, 1433, 1838
HpyAV	CCTTC	8 cut(s)	445, 600, 1144, 1243, 1287, 1326, 1382, 1643
HpyCH4III	ACNGT	5 cut(s)	186, 1157, 1437, 1560, 1832
HpyCH4IV	ACGT	4 cut(s)	384, 946, 1210, 1268
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1108, 1799, 1907
HpyF3I	CTNAG	1 cut(s)	87
HpySE526I	ACGT	4 cut(s)	384, 946, 1210, 1268
HspAI	GCGC	3 cut(s)	84, 1516, 1684
Kpn2I	TCCGGA	2 cut(s)	304, 600
KroI	GCCGGC	1 cut(s)	244
KroNI	GCCGGC	1 cut(s)	246
Ksp22I	TGATCA	1 cut(s)	528
Kzo9I	GATC	7 cut(s)	193, 483, 503, 528, 609, 853, 2021
LmnI	GCTCC	4 cut(s)	253, 284, 394, 805
Lsp1109I	GCAGC	1 cut(s)	92
LweI	GCATC	5 cut(s)	54, 466, 583, 1105, 1776
MaeI	CTAG	5 cut(s)	405, 435, 545, 1421, 1727
MaeII	ACGT	4 cut(s)	384, 946, 1210, 1268
MaeIII	GTNAC	3 cut(s)	186, 236, 554
MalI	GATC	7 cut(s)	195, 485, 505, 530, 611, 855, 2023
MboI	GATC	7 cut(s)	193, 483, 503, 528, 609, 853, 2021
MboII	GAAGA	6 cut(s)	368, 433, 560, 635, 870, 1175
MflI	RGATCY	3 cut(s)	609, 853, 2021
MhlI	GDGCHC	3 cut(s)	166, 271, 289
MluCI	AATT	8 cut(s)	571, 586, 723, 997, 1363, 1394, 1628, 1708
MlyI	GAGTC	5 cut(s)	217, 338, 823, 1049, 1688
MmeI	TCCRAC	2 cut(s)	339, 472
Mph1103I	ATGCAT	1 cut(s)	481
MroI	TCCGGA	2 cut(s)	304, 600
MroNI	GCCGGC	1 cut(s)	244
MseI	TTAA	8 cut(s)	45, 456, 570, 654, 668, 996, 1307, 1701
MslI	CAYNNNNRTG	2 cut(s)	1449, 1465
MspA1I	CMGCKG	1 cut(s)	233
MspI	CCGG	8 cut(s)	68, 81, 216, 245, 305, 601, 1489, 2035
MspR9I	CCNGG	7 cut(s)	216, 738, 1104, 1353, 1490, 1719, 2036
Mva1269I	GAATGC	3 cut(s)	225, 1374, 1804
MvaI	CCWGG	4 cut(s)	738, 1104, 1353, 1719
MvnI	CGCG	1 cut(s)	1686
MwoI	GCNNNNNNNGC	3 cut(s)	1108, 1799, 1907
NaeI	GCCGGC	1 cut(s)	246
NciI	CCSGG	3 cut(s)	216, 1490, 2036
NdeI	CATATG	1 cut(s)	1945
NdeII	GATC	7 cut(s)	193, 483, 503, 528, 609, 853, 2021
NgoMIV	GCCGGC	1 cut(s)	244
NlaIV	GGNNCC	7 cut(s)	93, 249, 390, 1101, 1254, 1553, 2023
NmuCI	GTSAC	2 cut(s)	186, 236
NsiI	ATGCAT	1 cut(s)	481
NspI	RCATGY	5 cut(s)	112, 244, 800, 1347, 1464
NspV	TTCGAA	1 cut(s)	703
PaeI	GCATGC	2 cut(s)	112, 1347
PagI	TCATGA	1 cut(s)	582
PciI	ACATGT	1 cut(s)	1460
PctI	GAATGC	3 cut(s)	225, 1374, 1804
PdiI	GCCGGC	1 cut(s)	246
PfeI	GAWTC	7 cut(s)	5, 311, 967, 1417, 1568, 1748, 1818
PfoI	TCCNGGA	1 cut(s)	214
PkrI	GCNGC	2 cut(s)	107, 1978
PleI	GAGTC	5 cut(s)	216, 337, 823, 1048, 1688
PpsI	GAGTC	5 cut(s)	216, 337, 823, 1048, 1688
Ppu21I	YACGTR	1 cut(s)	1269
PscI	ACATGT	1 cut(s)	1460
Psp6I	CCWGG	4 cut(s)	736, 1102, 1351, 1717
PspFI	CCCAGC	2 cut(s)	1548, 1802
PspGI	CCWGG	4 cut(s)	736, 1102, 1351, 1717
PspN4I	GGNNCC	7 cut(s)	93, 249, 390, 1101, 1254, 1553, 2023
PspPI	GGNCC	3 cut(s)	91, 1253, 1552
PsrI	GAACNNNNNNTAC	2 cut(s)	1707, 1739
PstNI	CAGNNNCTG	1 cut(s)	1205
PsuI	RGATCY	3 cut(s)	609, 853, 2021
PvuII	CAGCTG	1 cut(s)	233
RsaI	GTAC	4 cut(s)	58, 579, 1085, 1585
RsaNI	GTAC	4 cut(s)	57, 578, 1084, 1584
RseI	CAYNNNNRTG	2 cut(s)	1449, 1465
SaqAI	TTAA	8 cut(s)	45, 456, 570, 654, 668, 996, 1307, 1701
SatI	GCNGC	2 cut(s)	106, 1977
Sau3AI	GATC	7 cut(s)	193, 483, 503, 528, 609, 853, 2021
Sau96I	GGNCC	3 cut(s)	91, 1253, 1552
SchI	GAGTC	5 cut(s)	217, 338, 823, 1049, 1688
ScrFI	CCNGG	7 cut(s)	216, 738, 1104, 1353, 1490, 1719, 2036
SduI	GDGCHC	3 cut(s)	166, 271, 289
SfaNI	GCATC	5 cut(s)	54, 466, 583, 1105, 1776
SfuI	TTCGAA	1 cut(s)	703
SmiMI	CAYNNNNRTG	2 cut(s)	1449, 1465
SmlI	CTYRAG	4 cut(s)	833, 865, 929, 1283
SmoI	CTYRAG	4 cut(s)	833, 865, 929, 1283
SphI	GCATGC	2 cut(s)	112, 1347
Sse9I	AATT	8 cut(s)	571, 586, 723, 997, 1363, 1394, 1628, 1708
SsiI	CCGC	1 cut(s)	1976
SspI	AATATT	1 cut(s)	682
SspMI	CTAG	5 cut(s)	405, 435, 545, 1421, 1727
StyD4I	CCNGG	7 cut(s)	214, 736, 1102, 1351, 1488, 1717, 2034
StyI	CCWWGG	2 cut(s)	630, 1002
TaaI	ACNGT	5 cut(s)	186, 1157, 1437, 1560, 1832
TaiI	ACGT	4 cut(s)	387, 949, 1213, 1271
TaqI	TCGA	7 cut(s)	415, 445, 506, 703, 970, 1166, 1816
TaqII	GACCGA	1 cut(s)	246
TasI	AATT	8 cut(s)	571, 586, 723, 997, 1363, 1394, 1628, 1708
TatI	WGTACW	2 cut(s)	577, 1083
TauI	GCSGC	1 cut(s)	1979
TfiI	GAWTC	7 cut(s)	5, 311, 967, 1417, 1568, 1748, 1818
Tru1I	TTAA	8 cut(s)	45, 456, 570, 654, 668, 996, 1307, 1701
Tru9I	TTAA	8 cut(s)	45, 456, 570, 654, 668, 996, 1307, 1701
TscAI	CASTG	3 cut(s)	294, 915, 1411
TseFI	GTSAC	2 cut(s)	186, 236
TseI	GCWGC	1 cut(s)	105
Tsp45I	GTSAC	2 cut(s)	186, 236
TspGWI	ACGGA	2 cut(s)	333, 1064
TspRI	CASTG	3 cut(s)	294, 915, 1411
VneI	GTGCAC	1 cut(s)	162
XapI	RAATTY	3 cut(s)	586, 1394, 1628
XceI	RCATGY	5 cut(s)	112, 244, 800, 1347, 1464
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1848
XmiI	GTMKAC	1 cut(s)	1213
XspI	CTAG	5 cut(s)	405, 435, 545, 1421, 1727
Zsp2I	ATGCAT	1 cut(s)	481

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.