Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007572

Physical Location & Seq

Genomic Coordinates Reverse (-)

1530132 .. 1535558

Gene Structure 5427 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G05170.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3198 bp

ATGGAATCCGAAGGAGAAACCGCGGGAAAGCCGATGAAGAACATTGTTCCGCAGACTTGCCAGATCTGTAGTGACAATGTTGGCAAGACTGTTGATGGAGATCGTTTTGTGGCTTGTGATATTTGTTCATTCCCAGTTTGTCGGCCTTGCTACGAGTATGAGAGGAAAGATGGGAATCAATCTTGTCCTCAGTGCAAAACCAGATACAAGAGGCTCAAAGGTAGTCCTGCTATTCCTGGTGATAAAGACGAGGATGGCTTAGCTGATGAAGGTACTGTTGAGTTCAACTACCCTCAGAAGGAGAAAATTTCAGAGCGGATGCTTGGTTGGCATCTTACTCGTGGGAAGGGAGAGGAAATGGGGGAACCCCAGTATGATAAAGAGGTCTCTCACAATCATCTTCCTCGTCTCACGAGCAGACAAGATACTTCAGGAGAGTTTTCTGCTGCCTCACCTGAACGCCTCTCTGTATCTTCTACTATCGCTGGGGGAAAGCGCCTTCCCTATTCATCAGATGTCAATCAATCACCAAATAGAAGGATTGTGGATCCTGTTGGACTCGGGAATGTAGCTTGGAAGGAGAGAGTTGATGGCTGGAAAATGAAGCAAGAGAAGAATACTGGTCCTGTCAGCACGCAGGCTGCTTCTGAAAGAGGTGGAGTAGATATTGATGCCAGCACAGATATCCTAGCAGATGAGGCTCTGCTGAATGACGAAGCGAGGCAGCCTCTGTCAAGGAAAGTTTCAATTCCTTCATCACGGATCAATCCTTACAGAATGGTTATTATGCTGCGGCTTGTTATCCTTTGTCTCTTCTTGCATTACCGTATAACAAACCCAGTGCCAAATGCCTTTGCTCTATGGCTGGTCTCTGTGATATGTGAGATCTGGTTTGCCTTATCCTGGATTTTGGATCAGTTTCCCAAGTGGTTTCCTGTGAACCGTGAAACCTACCTCGACAGGCTTGCTTTAAGATATGATCGTGAAGGTGAGCCATCACAGTTAGCTGCTGTTGACATTTTCGTGAGTACTGTTGACCCCTTGAAGGAGCCACCCCTTGTGACAGCCAACACAGTGCTCTCTATTCTGGCTGTTGACTACCCAGTTGACAAGGTGTCCTGTTATGTTTCTGATGATGGTGCTGCTATGTTATCATTTGAATCACTTGCAGAAACATCAGAGTTTGCTCGTAAATGGGTACCATTTTGCAAGAAATATAGCATAGAGCCTCGTGCACCAGAATGGTACTTTGCTGCGAAAATAGATTACTTGAAGGATAAAGTTCAGACATCATTTGTCAAAGATCGTAGAGCTATGAAGAGGGAATATGAGGAATTTAAAATCCGAATCAATGCACTTGTTTCCAAAGCCCTAAAATGTCCTGAAGAAGGGTGGGTTATGCAAGATGGCACACCGTGGCCTGGAAATAATACAAGGGACCATCCAGGAATGATCCAGGTCTTCTTAGGGCAAAATGGTGGACTTGATGCAGAGGGCAATGAGCTCCCGCGTTTGGTATATGTTTCTCGAGAAAAGCGACCAGGATTCCAGCACCACAAAAAGGCTGGTGCTATGAATGCACTGGTGAGAGTTTCAGCAGTTCTTACCAATGGACCTTTCATCTTGAATCTTGATTGTGATCATTACATAAATAACAGCAAAGCCTTAAGAGAAGCAATGTGCTTCCTGATGGACCCAAACCTCGGGAAGCAAGTTTGTTATGTTCAGTTCCCACAAAGATTTGATGGTATCGATAAGAACGATAGATATGCTAATCGTAATACCGTGTTCTTTGATATTAACTTGAGAGGTTTAGATGGGATTCAAGGACCTGTATATGTCGGAACTGGATGTGTTTTCAACAGAACAGCATTATACGGTTATGAACCTCCAATAAAAGTAAAACACAAGAAGCCAAGTCTTTTATCTAAGCTCTGTGGTGGATCAAGAAAGAAGAATTCCAAAGCTAAGAAAGAGTCGGACAAAAAGAAATCAGGCAGGCATACTGACTCAACTGTTCCTGTATTCAACCTCGATGACATAGAAGAGGGAGTTGAAGGTGCTGGTTTTGATGATGAAAAGGCGCTCTTAATGTCGCAAATGAGCCTGGAGAAGCGATTTGGACAGTCTGCTGTTTTTGTTGCTTCTACCCTAATGGAAAATGGTGGTGTTCCTCCTTCAGCAACTCCAGAAAACCTTCTCAAAGAGGCTATCCATGTCATTAGTTGTGGTTATGAGGATAAGTCAGATTGGGGAATGGAGATTGGATGGATCTATGGTTCTGTGACAGAAGATATTCTGACTGGGTTCAAAATGCATGCCCGTGGATGGCGATCCATTTACTGCATGCCTAAGCTTCCAGCTTTCAAGGGTTCTGCTCCTATCAATCTTTCAGATCGTCTGAACCAAGTGCTGAGGTGGGCTTTAGGTTCAGTTGAGATTCTCTTCAGTCGGCATTGTCCTATATGGTATGGTTACAATGGGAGGCTAAAATTTCTTGAGAGGTTTGCGTATGTGAACACCACCATCTACCCTATCACCTCCATTCCTCTTCTCATGTATTGTACATTGCCAGCCGTTTGTCTCTTCACCAACCAGTTTATTATTCCTCAGATTAGTAACATTGCAAGTATATGGTTTCTGTCTCTCTTTCTCTCCATTTTCGCCACGGGTATACTAGAAATGAGGTGGAGTGGCGTAGGCATAGACGAATGGTGGAGAAACGAGCAGTTTTGGGTCATTGGTGGAGTATCCGCTCATTTATTCGCTGTGTTTCAAGGTATCCTCAAAGTCCTTGCCGGTATTGACACAAACTTCACAGTTACCTCAAAAGCTTCAGATGAAGACGGAGACTTTGCTGAGCTCTACTTGTTCAAATGGACAACACTTCTGATTCCGCCAACGACGCTGCTCATTGTAAACTTAGTGGGAGTTGTTGCAGGAGTCTCTTATGCTATCAACAGTGGATACCAATCATGGGGACCACTCTTTGGTAAGTTGTTCTTTGCCTTCTGGGTGATTGTTCACTTGTACCCTTTCCTCAAGGGTTTGATGGGTCGACAGAACCGGACTCCTACCATTGTTGTGGTCTGGTCTGTTCTCTTGGCTTCTATCTTCTCGTTGTTGTGGGTTAGGATTGATCCCTTCACTAGCCGAGTCACTGGCCCGGACATTCTGGAATGTGGAATCAACTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005886 GO:0005911 GO:0005975 GO:0005976 GO:0006073 GO:0006950 GO:0006952 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009506 GO:0009832 GO:0009833 GO:0009834 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030054 GO:0030243 GO:0030244 GO:0031410 GO:0031982 GO:0031984 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046527 GO:0050896 GO:0051273 GO:0051274 GO:0051301 GO:0055044 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:0097708 GO:0098791 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt zf-UDP

Protein Analysis

1065

Amino Acids

119.68

Weight (kDa)

7.66

Isoelectric Point (pI)

35.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-UDP	PF14569	10 - 86	1.6e-38	Zinc-binding RING-finger
Cellulose_synt	PF03552	338 - 1057	0.0	Cellulose synthase
Glyco_trans_2_3	PF13632	750 - 862	9.9e-07	Glycosyl transferase family group 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0007572)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05170
fragaria_vesca	FvH4_7g01100 FvH4_7g01100 FvH4_7g01100 FvH4_7g01100 FvH4_7g01100
malus_domestica	MD02G1311600.v1.1 MD07G1011100.v1.1
prunus_persica	Prupe.2G011200_v2.0.a1 Prupe.2G014300_v2.0.a1 Prupe.2G014300_v2.0.a1
pyrus_communis	pycom02g26140 pycom02g26150 pycom07g00920
rosa_chinensis	RchiOBHm_Chr1g0316091
rosa_laevigata	RLG00000030696
rosa_multiflora	Rmu_sc0002531.1_g000033
rosa_roxburghii	Rroxscaffold_4G00331140
rosa_rugosa	Rorug01G0008900
rosa_samantha	Rh1AG019000 Rh1BG013900 Rh1CG016600 Rh1DG013600
rosa_wichuraiana	Rw1G001230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1198
AccB1I	GGYRCC	1 cut(s)	1198
AccB7I	CCANNNNNTGG	1 cut(s)	2990
AccBSI	CCGCTC	2 cut(s)	316, 2756
AccI	GTMKAC	2 cut(s)	2674, 3058
AccII	CGCG	2 cut(s)	23, 1510
AciI	CCGC	8 cut(s)	21, 23, 50, 316, 793, 1508, 2754, 2897
AclWI	GGATC	9 cut(s)	542, 555, 770, 921, 1447, 1951, 2279, 2328, 3134
AcsI	RAATTY	4 cut(s)	306, 1334, 1957, 2492
AcuI	CTGAAG	5 cut(s)	414, 1404, 2163, 2431, 2820
AdeI	CACNNNGTG	1 cut(s)	1416
AfaI	GTAC	6 cut(s)	274, 1030, 1200, 1247, 2566, 3032
AflII	CTTAAG	1 cut(s)	1666
AhdI	GACNNNNNGTC	1 cut(s)	1114
AjnI	CCWGG	7 cut(s)	235, 902, 1420, 1444, 1455, 1540, 2106
AjuI	GAANNNNNNNTTGG	2 cut(s)	1601, 1633
AloI	GAACNNNNNNTCC	2 cut(s)	2263, 2295
Alw21I	GWGCWC	4 cut(s)	1080, 1237, 1506, 2865
Alw26I	GTCTC	8 cut(s)	391, 413, 815, 874, 2588, 2649, 2844, 2950
Alw44I	GTGCAC	1 cut(s)	1233
AlwI	GGATC	9 cut(s)	542, 555, 770, 921, 1447, 1951, 2279, 2328, 3134
AlwNI	CAGNNNCTG	1 cut(s)	730
Ama87I	CYCGRG	3 cut(s)	560, 1527, 1703
AoxI	GGCC	3 cut(s)	143, 1418, 3163
ApaLI	GTGCAC	1 cut(s)	1233
ApeKI	GCWGC	8 cut(s)	446, 641, 724, 790, 1007, 1142, 1253, 2908
ApoI	RAATTY	4 cut(s)	306, 1334, 1957, 2492
ArsI	GACNNNNNNTTYG	2 cut(s)	2837, 2869
Asp700I	GAANNNNTTC	2 cut(s)	2196, 2295
Asp718I	GGTACC	1 cut(s)	1198
AspLEI	GCGC	2 cut(s)	498, 2086
AspS9I	GGNCC	7 cut(s)	623, 1438, 1613, 1693, 1829, 2981, 3164
AsuC2I	CCSGG	1 cut(s)	3167
AsuHPI	GGTGA	8 cut(s)	251, 444, 519, 1001, 1597, 2530, 2581, 3028
AvaI	CYCGRG	3 cut(s)	560, 1527, 1703
AvaII	GGWCC	6 cut(s)	623, 1438, 1613, 1693, 1829, 2981
BaeGI	GKGCMC	1 cut(s)	1237
BamHI	GGATCC	1 cut(s)	547
BanI	GGYRCC	1 cut(s)	1198
BanII	GRGCYC	2 cut(s)	1506, 2865
BauI	CACGAG	3 cut(s)	339, 412, 1230
BbsI	GAAGAC	2 cut(s)	1453, 2850
Bbv12I	GWGCWC	4 cut(s)	1080, 1237, 1506, 2865
BbvCI	CCTCAGC	1 cut(s)	2414
BbvI	GCAGC	8 cut(s)	433, 628, 736, 777, 994, 1129, 1240, 2895
BceAI	ACGGC	1 cut(s)	2561
BcgI	CGANNNNNNTGC	6 cut(s)	320, 354, 947, 981, 1751, 1785
BciT130I	CCWGG	7 cut(s)	237, 904, 1422, 1446, 1457, 1542, 2108
BciVI	GTATCC	3 cut(s)	2761, 2792, 2960
BclI	TGATCA	1 cut(s)	1639
BcnI	CCSGG	1 cut(s)	3167
BcoDI	GTCTC	8 cut(s)	391, 413, 815, 874, 2588, 2649, 2844, 2950
BfaI	CTAG	3 cut(s)	689, 2678, 3150
BfmI	CTRYAG	1 cut(s)	67
BfoI	RGCGCY	2 cut(s)	499, 2087
BfrI	CTTAAG	1 cut(s)	1666
BfuI	GTATCC	3 cut(s)	2761, 2792, 2960
BglII	AGATCT	2 cut(s)	63, 885
BisI	GCNGC	9 cut(s)	447, 642, 725, 791, 794, 1008, 1143, 1254, 2909
BlpI	GCTNAGC	2 cut(s)	259, 2859
BlsI	GCNGC	9 cut(s)	448, 643, 726, 792, 795, 1009, 1144, 1255, 2910
BmcAI	AGTACT	1 cut(s)	1030
Bme1390I	CCNGG	8 cut(s)	237, 904, 1422, 1446, 1457, 1542, 2108, 3167
Bme18I	GGWCC	6 cut(s)	623, 1438, 1613, 1693, 1829, 2981
BmeRI	GACNNNNNGTC	1 cut(s)	1114
BmeT110I	CYCGRG	3 cut(s)	560, 1527, 1703
BmgT120I	GGNCC	7 cut(s)	623, 1438, 1613, 1693, 1829, 2981, 3164
BmiI	GGNNCC	7 cut(s)	366, 549, 1050, 1200, 1439, 1695, 2982
BmrFI	CCNGG	8 cut(s)	237, 904, 1422, 1446, 1457, 1542, 2108, 3167
BmrI	ACTGGG	5 cut(s)	128, 364, 833, 1097, 2313
BmsI	GCATC	4 cut(s)	309, 340, 661, 1477
BmuI	ACTGGG	5 cut(s)	128, 364, 833, 1097, 2313
BpiI	GAAGAC	2 cut(s)	1453, 2850
BplI	GAGNNNNNCTC	2 cut(s)	712, 744
BpmI	CTGGAG	2 cut(s)	2129, 2172
Bpu10I	CCTNAGC	2 cut(s)	2352, 2414
Bpu1102I	GCTNAGC	2 cut(s)	259, 2859
BpuEI	CTTGAG	3 cut(s)	1825, 2519, 3026
BpuMI	CCSGG	1 cut(s)	3167
Bsa29I	ATCGAT	1 cut(s)	1752
BsaBI	GATNNNNATC	6 cut(s)	99, 174, 519, 1638, 2332, 2971
BsaI	GGTCTC	2 cut(s)	391, 874
BsaJI	CCNNGG	5 cut(s)	21, 1415, 1702, 2323, 2667
BsaWI	WCCGGW	1 cut(s)	3066
Bse118I	RCCGGY	1 cut(s)	2798
Bse3DI	GCAATG	4 cut(s)	1504, 1683, 2567, 2622
Bse8I	GATNNNNATC	6 cut(s)	99, 174, 519, 1638, 2332, 2971
BseBI	CCWGG	7 cut(s)	237, 904, 1422, 1446, 1457, 1542, 2108
BseCI	ATCGAT	1 cut(s)	1752
BseDI	CCNNGG	5 cut(s)	21, 1415, 1702, 2323, 2667
BseGI	GGATG	6 cut(s)	259, 324, 1441, 1856, 2273, 2333
BseJI	GATNNNNATC	6 cut(s)	99, 174, 519, 1638, 2332, 2971
BseMI	GCAATG	4 cut(s)	1504, 1683, 2567, 2622
BseMII	CTCAG	5 cut(s)	203, 308, 2405, 2624, 2850
BseSI	GKGCMC	1 cut(s)	1237
BseXI	GCAGC	8 cut(s)	433, 628, 736, 777, 994, 1129, 1240, 2895
BseYI	CCCAGC	1 cut(s)	485
Bsh1236I	CGCG	2 cut(s)	23, 1510
BshFI	GGCC	3 cut(s)	145, 1420, 3165
BshNI	GGYRCC	1 cut(s)	1198
BshVI	ATCGAT	1 cut(s)	1752
BsiHKAI	GWGCWC	4 cut(s)	1080, 1237, 1506, 2865
BsiHKCI	CYCGRG	3 cut(s)	560, 1527, 1703
BsiSI	CCGG	3 cut(s)	2799, 3067, 3167
BslFI	GGGAC	2 cut(s)	1451, 2994
BsmAI	GTCTC	8 cut(s)	391, 413, 815, 874, 2588, 2649, 2844, 2950
BsmBI	CGTCTC	1 cut(s)	413
BsmFI	GGGAC	2 cut(s)	1451, 2994
BsmI	GAATGC	1 cut(s)	1582
BsnI	GGCC	3 cut(s)	145, 1420, 3165
Bso31I	GGTCTC	2 cut(s)	391, 874
BsoBI	CYCGRG	3 cut(s)	560, 1527, 1703
Bsp1286I	GDGCHC	4 cut(s)	1080, 1237, 1506, 2865
Bsp1407I	TGTACA	1 cut(s)	2564
Bsp1720I	GCTNAGC	2 cut(s)	259, 2859
BspACI	CCGC	8 cut(s)	21, 23, 50, 316, 793, 1508, 2754, 2897
BspANI	GGCC	3 cut(s)	145, 1420, 3165
BspCNI	CTCAG	5 cut(s)	202, 307, 2406, 2623, 2851
BspDI	ATCGAT	1 cut(s)	1752
BspFNI	CGCG	2 cut(s)	23, 1510
BspLI	GGNNCC	7 cut(s)	366, 549, 1050, 1200, 1439, 1695, 2982
BspPI	GGATC	9 cut(s)	542, 555, 770, 921, 1447, 1951, 2279, 2328, 3134
BspT107I	GGYRCC	1 cut(s)	1198
BspTI	CTTAAG	1 cut(s)	1666
BspTNI	GGTCTC	2 cut(s)	391, 874
BsrBI	CCGCTC	2 cut(s)	316, 2756
BsrDI	GCAATG	4 cut(s)	1504, 1683, 2567, 2622
BsrFI	RCCGGY	1 cut(s)	2798
BsrGI	TGTACA	1 cut(s)	2564
BssAI	RCCGGY	1 cut(s)	2798
BssECI	CCNNGG	5 cut(s)	21, 1415, 1702, 2323, 2667
BssNAI	GTATAC	1 cut(s)	2675
BssSI	CACGAG	3 cut(s)	339, 412, 1230
Bst1107I	GTATAC	1 cut(s)	2675
Bst2BI	CACGAG	3 cut(s)	339, 412, 1230
Bst2UI	CCWGG	7 cut(s)	237, 904, 1422, 1446, 1457, 1542, 2108
Bst6I	CTCTTC	6 cut(s)	818, 1313, 2040, 2450, 2556, 2591
BstAFI	CTTAAG	1 cut(s)	1666
BstAUI	TGTACA	1 cut(s)	2564
BstC8I	GCNNGC	8 cut(s)	635, 639, 676, 966, 2000, 2319, 2348, 2574
BstDSI	CCRYGG	4 cut(s)	21, 1415, 2323, 2667
BstENI	CCTNNNNNAGG	1 cut(s)	1386
BstF5I	GGATG	6 cut(s)	259, 324, 1441, 1856, 2273, 2333
BstFNI	CGCG	2 cut(s)	23, 1510
BstH2I	RGCGCY	2 cut(s)	499, 2087
BstHHI	GCGC	2 cut(s)	498, 2086
BstMAI	GTCTC	8 cut(s)	391, 413, 815, 874, 2588, 2649, 2844, 2950
BstMWI	GCNNNNNNNGC	4 cut(s)	328, 698, 1577, 2905
BstNI	CCWGG	7 cut(s)	237, 904, 1422, 1446, 1457, 1542, 2108
BstNSI	RCATGY	2 cut(s)	2321, 2350
BstSCI	CCNGG	8 cut(s)	235, 902, 1420, 1444, 1455, 1540, 2106, 3165
BstSFI	CTRYAG	1 cut(s)	67
BstSLI	GKGCMC	1 cut(s)	1237
BstUI	CGCG	2 cut(s)	23, 1510
BstV1I	GCAGC	8 cut(s)	433, 628, 736, 777, 994, 1129, 1240, 2895
BstV2I	GAAGAC	2 cut(s)	1453, 2850
BstX2I	RGATCY	4 cut(s)	63, 547, 885, 2271
BstXI	CCANNNNNNTGG	1 cut(s)	3085
BstYI	RGATCY	4 cut(s)	63, 547, 885, 2271
BstZ17I	GTATAC	1 cut(s)	2675
Bsu15I	ATCGAT	1 cut(s)	1752
BsuI	GTATCC	3 cut(s)	2761, 2792, 2960
BsuRI	GGCC	3 cut(s)	145, 1420, 3165
BsuTUI	ATCGAT	1 cut(s)	1752
BtgI	CCRYGG	4 cut(s)	21, 1415, 2323, 2667
BtsCI	GGATG	6 cut(s)	259, 324, 1441, 1856, 2273, 2333
BtsIMutI	CAGTG	6 cut(s)	197, 846, 1080, 1580, 2968, 3159
Cac8I	GCNNGC	8 cut(s)	635, 639, 676, 966, 2000, 2319, 2348, 2574
CaiI	CAGNNNCTG	1 cut(s)	730
CfoI	GCGC	2 cut(s)	498, 2086
Cfr10I	RCCGGY	1 cut(s)	2798
Cfr13I	GGNCC	7 cut(s)	623, 1438, 1613, 1693, 1829, 2981, 3164
Cfr42I	CCGCGG	1 cut(s)	24
ClaI	ATCGAT	1 cut(s)	1752
CseI	GACGC	1 cut(s)	2914
Csp6I	GTAC	6 cut(s)	273, 1029, 1199, 1246, 2565, 3031
CviAII	CATG	5 cut(s)	2216, 2318, 2347, 2557, 2976
CviQI	GTAC	6 cut(s)	273, 1029, 1199, 1246, 2565, 3031
DraI	TTTAAA	1 cut(s)	1339
DraIII	CACNNNGTG	1 cut(s)	1416
DriI	GACNNNNNGTC	1 cut(s)	1114
Eam1104I	CTCTTC	6 cut(s)	818, 1313, 2040, 2450, 2556, 2591
Eam1105I	GACNNNNNGTC	1 cut(s)	1114
EarI	CTCTTC	6 cut(s)	818, 1313, 2040, 2450, 2556, 2591
EciI	GGCGGA	1 cut(s)	2886
Ecl136II	GAGCTC	2 cut(s)	1504, 2863
Eco24I	GRGCYC	2 cut(s)	1506, 2865
Eco31I	GGTCTC	2 cut(s)	391, 874
Eco32I	GATATC	1 cut(s)	685
Eco47I	GGWCC	6 cut(s)	623, 1438, 1613, 1693, 1829, 2981
Eco53kI	GAGCTC	2 cut(s)	1504, 2863
Eco57I	CTGAAG	5 cut(s)	414, 1404, 2163, 2431, 2820
Eco88I	CYCGRG	3 cut(s)	560, 1527, 1703
EcoICRI	GAGCTC	2 cut(s)	1504, 2863
EcoNI	CCTNNNNNAGG	1 cut(s)	1386
EcoO109I	RGGNCCY	1 cut(s)	1829
EcoRI	GAATTC	1 cut(s)	1957
EcoRII	CCWGG	7 cut(s)	235, 902, 1420, 1444, 1455, 1540, 2106
EcoRV	GATATC	1 cut(s)	685
EcoT22I	ATGCAT	1 cut(s)	2319
EcoT38I	GRGCYC	2 cut(s)	1506, 2865
Esp3I	CGTCTC	1 cut(s)	413
FaeI	CATG	5 cut(s)	2219, 2321, 2350, 2560, 2979
FalI	AAGNNNNNCTT	4 cut(s)	2072, 2104, 2987, 3019
FaqI	GGGAC	2 cut(s)	1451, 2994
FatI	CATG	5 cut(s)	2215, 2317, 2346, 2556, 2975
FauI	CCCGC	2 cut(s)	16, 1515
FbaI	TGATCA	1 cut(s)	1639
FblI	GTMKAC	2 cut(s)	2674, 3058
Fnu4HI	GCNGC	9 cut(s)	447, 642, 725, 791, 794, 1008, 1143, 1254, 2909
FokI	GGATG	6 cut(s)	266, 331, 1428, 1863, 2280, 2340
FriOI	GRGCYC	2 cut(s)	1506, 2865
Fsp4HI	GCNGC	9 cut(s)	447, 642, 725, 791, 794, 1008, 1143, 1254, 2909
FspBI	CTAG	3 cut(s)	689, 2678, 3150
GlaI	GCGC	2 cut(s)	497, 2085
GluI	GCNGC	9 cut(s)	447, 642, 725, 791, 794, 1008, 1143, 1254, 2909
GsaI	CCCAGC	1 cut(s)	489
GsuI	CTGGAG	2 cut(s)	2129, 2172
HaeII	RGCGCY	2 cut(s)	499, 2087
HaeIII	GGCC	3 cut(s)	145, 1420, 3165
HapII	CCGG	3 cut(s)	2799, 3067, 3167
HgaI	GACGC	1 cut(s)	2914
HhaI	GCGC	2 cut(s)	498, 2086
Hin1II	CATG	5 cut(s)	2219, 2321, 2350, 2560, 2979
Hin6I	GCGC	2 cut(s)	496, 2084
HinP1I	GCGC	2 cut(s)	496, 2084
HincII	GTYRAC	5 cut(s)	1015, 1036, 1096, 1108, 3059
HindII	GTYRAC	5 cut(s)	1015, 1036, 1096, 1108, 3059
HindIII	AAGCTT	2 cut(s)	2354, 2832
HpaII	CCGG	3 cut(s)	2799, 3067, 3167
HphI	GGTGA	8 cut(s)	251, 444, 519, 1001, 1597, 2530, 2581, 3028
Hpy99I	CGWCG	1 cut(s)	2908
HpyF10VI	GCNNNNNNNGC	4 cut(s)	328, 698, 1577, 2905
Hsp92II	CATG	5 cut(s)	2219, 2321, 2350, 2560, 2979
HspAI	GCGC	2 cut(s)	496, 2084
KpnI	GGTACC	1 cut(s)	1202
Ksp22I	TGATCA	1 cut(s)	1639
KspI	CCGCGG	1 cut(s)	24
LmnI	GCTCC	3 cut(s)	1048, 1509, 2383
Lsp1109I	GCAGC	8 cut(s)	433, 628, 736, 777, 994, 1129, 1240, 2895
LweI	GCATC	4 cut(s)	309, 340, 661, 1477
MaeI	CTAG	3 cut(s)	689, 2678, 3150
MaeIII	GTNAC	7 cut(s)	71, 1060, 2284, 2474, 2618, 2821, 3157
MbiI	CCGCTC	2 cut(s)	316, 2756
MflI	RGATCY	4 cut(s)	63, 547, 885, 2271
MhlI	GDGCHC	4 cut(s)	1080, 1237, 1506, 2865
MluCI	AATT	5 cut(s)	306, 747, 1334, 1957, 2492
MlyI	GAGTC	6 cut(s)	552, 1985, 2003, 2952, 3064, 3165
MmeI	TCCRAC	3 cut(s)	535, 1822, 1959
Mph1103I	ATGCAT	1 cut(s)	2319
MroXI	GAANNNNTTC	2 cut(s)	2196, 2295
MseI	TTAA	5 cut(s)	971, 1338, 1667, 1800, 2090
MslI	CAYNNNNRTG	4 cut(s)	1022, 1240, 2322, 3083
MspA1I	CMGCKG	1 cut(s)	23
MspCI	CTTAAG	1 cut(s)	1666
MspI	CCGG	3 cut(s)	2799, 3067, 3167
MspR9I	CCNGG	8 cut(s)	237, 904, 1422, 1446, 1457, 1542, 2108, 3167
Mva1269I	GAATGC	1 cut(s)	1582
MvaI	CCWGG	7 cut(s)	237, 904, 1422, 1446, 1457, 1542, 2108
MvnI	CGCG	2 cut(s)	23, 1510
MwoI	GCNNNNNNNGC	4 cut(s)	328, 698, 1577, 2905
NciI	CCSGG	1 cut(s)	3167
NlaIII	CATG	5 cut(s)	2219, 2321, 2350, 2560, 2979
NlaIV	GGNNCC	7 cut(s)	366, 549, 1050, 1200, 1439, 1695, 2982
NmeAIII	GCCGAG	1 cut(s)	3179
NmuCI	GTSAC	4 cut(s)	71, 1060, 2284, 3157
NsiI	ATGCAT	1 cut(s)	2319
NspI	RCATGY	2 cut(s)	2321, 2350
PaeI	GCATGC	2 cut(s)	2321, 2350
PaeR7I	CTCGAG	1 cut(s)	1527
PcsI	WCGNNNNNNNCGW	2 cut(s)	1534, 1758
PctI	GAATGC	1 cut(s)	1582
PdmI	GAANNNNTTC	2 cut(s)	2196, 2295
PflMI	CCANNNNNTGG	1 cut(s)	2990
PfoI	TCCNGGA	2 cut(s)	902, 1444
PkrI	GCNGC	9 cut(s)	448, 643, 726, 792, 795, 1009, 1144, 1255, 2910
PleI	GAGTC	6 cut(s)	552, 1984, 2003, 2951, 3064, 3164
PpsI	GAGTC	6 cut(s)	552, 1984, 2003, 2951, 3064, 3164
PpuMI	RGGWCCY	1 cut(s)	1829
Psp124BI	GAGCTC	2 cut(s)	1506, 2865
Psp5II	RGGWCCY	1 cut(s)	1829
Psp6I	CCWGG	7 cut(s)	235, 902, 1420, 1444, 1455, 1540, 2106
PspFI	CCCAGC	1 cut(s)	485
PspGI	CCWGG	7 cut(s)	235, 902, 1420, 1444, 1455, 1540, 2106
PspN4I	GGNNCC	7 cut(s)	366, 549, 1050, 1200, 1439, 1695, 2982
PspPI	GGNCC	7 cut(s)	623, 1438, 1613, 1693, 1829, 2981, 3164
PspPPI	RGGWCCY	1 cut(s)	1829
PstNI	CAGNNNCTG	1 cut(s)	730
PsuI	RGATCY	4 cut(s)	63, 547, 885, 2271
RsaI	GTAC	6 cut(s)	274, 1030, 1200, 1247, 2566, 3032
RsaNI	GTAC	6 cut(s)	273, 1029, 1199, 1246, 2565, 3031
RseI	CAYNNNNRTG	4 cut(s)	1022, 1240, 2322, 3083
SacI	GAGCTC	2 cut(s)	1506, 2865
SacII	CCGCGG	1 cut(s)	24
SalI	GTCGAC	1 cut(s)	3057
SaqAI	TTAA	5 cut(s)	971, 1338, 1667, 1800, 2090
SatI	GCNGC	9 cut(s)	447, 642, 725, 791, 794, 1008, 1143, 1254, 2909
Sau96I	GGNCC	7 cut(s)	623, 1438, 1613, 1693, 1829, 2981, 3164
ScaI	AGTACT	1 cut(s)	1030
SchI	GAGTC	6 cut(s)	552, 1985, 2003, 2952, 3064, 3165
ScrFI	CCNGG	8 cut(s)	237, 904, 1422, 1446, 1457, 1542, 2108, 3167
SduI	GDGCHC	4 cut(s)	1080, 1237, 1506, 2865
SfaNI	GCATC	4 cut(s)	309, 340, 661, 1477
SfcI	CTRYAG	1 cut(s)	67
Sfr274I	CTCGAG	1 cut(s)	1527
Sfr303I	CCGCGG	1 cut(s)	24
SgrBI	CCGCGG	1 cut(s)	24
SinI	GGWCC	6 cut(s)	623, 1438, 1613, 1693, 1829, 2981
SlaI	CTCGAG	1 cut(s)	1527
SmiMI	CAYNNNNRTG	4 cut(s)	1022, 1240, 2322, 3083
SmlI	CTYRAG	5 cut(s)	1527, 1666, 1804, 2498, 3041
SmoI	CTYRAG	5 cut(s)	1527, 1666, 1804, 2498, 3041
SphI	GCATGC	2 cut(s)	2321, 2350
Sse9I	AATT	5 cut(s)	306, 747, 1334, 1957, 2492
SsiI	CCGC	8 cut(s)	21, 23, 50, 316, 793, 1508, 2754, 2897
SspMI	CTAG	3 cut(s)	689, 2678, 3150
SstI	GAGCTC	2 cut(s)	1506, 2865
StyD4I	CCNGG	8 cut(s)	235, 902, 1420, 1444, 1455, 1540, 2106, 3165
TaqI	TCGA	5 cut(s)	957, 1528, 1752, 2034, 3058
TasI	AATT	5 cut(s)	306, 747, 1334, 1957, 2492
TatI	WGTACW	2 cut(s)	1028, 2564
TauI	GCSGC	1 cut(s)	796
Tru1I	TTAA	5 cut(s)	971, 1338, 1667, 1800, 2090
Tru9I	TTAA	5 cut(s)	971, 1338, 1667, 1800, 2090
TscAI	CASTG	6 cut(s)	197, 846, 1080, 1587, 2968, 3166
TseFI	GTSAC	4 cut(s)	71, 1060, 2284, 3157
TseI	GCWGC	8 cut(s)	446, 641, 724, 790, 1007, 1142, 1253, 2908
Tsp45I	GTSAC	4 cut(s)	71, 1060, 2284, 3157
TspGWI	ACGGA	2 cut(s)	775, 2862
TspRI	CASTG	6 cut(s)	197, 846, 1080, 1587, 2968, 3166
Van91I	CCANNNNNTGG	1 cut(s)	2990
Vha464I	CTTAAG	1 cut(s)	1666
VneI	GTGCAC	1 cut(s)	1233
VpaK11BI	GGWCC	6 cut(s)	623, 1438, 1613, 1693, 1829, 2981
XagI	CCTNNNNNAGG	1 cut(s)	1386
XapI	RAATTY	4 cut(s)	306, 1334, 1957, 2492
XceI	RCATGY	2 cut(s)	2321, 2350
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1562
XhoI	CTCGAG	1 cut(s)	1527
XmiI	GTMKAC	2 cut(s)	2674, 3058
XmnI	GAANNNNTTC	2 cut(s)	2196, 2295
XspI	CTAG	3 cut(s)	689, 2678, 3150
ZrmI	AGTACT	1 cut(s)	1030
Zsp2I	ATGCAT	1 cut(s)	2319

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.