Rroxscaffold_4G00331140

Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Forward (+)
64953950 .. 64962023
8074 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00331140.1

Sequence Viewer

Length: 3516 bp
ATGGAGCTGGAGCTAAAGATGCAAGTTCTTTTCTTGGACAAGGTAATGGTTTACTTTCCTCAACCAACTAGAAAGGAGGAACAAGATCCAAATGCTGATTTTTCTATGAACTTAAAGTTCAAAAATGTGGATATTGATCCACCATCTCCAAAACTGGACTTTAGTGCAAAGAAAACATCTGGTGGGGAATTGGATCAATTCAACTGGGTTGAATTGGGTTTTCTGGATTTGAAGAATTGGCTATTAAAGATCGGCCTTTTAGATGAGATAAGCACAGATAAGGTGGAAATGGAGTCGGAAGGAGAAACTGAGGCAAAGCCGATGAAGAACTTGGGTGGTCAGGTTTGCCAGATCTGTGGGGATAATGTTGGGAAGACAGCTACTGGTGAACCATTCATTGCCTGCGACGTCTGCTCTTTTCCTGTTTGCAGGCCATGCTATGAGTATGAGAGGAAGGATGGAAATCAGTCTTGCCCTCAATGCAAAACCAGATACAAGAGGCACAAAGGAAGTCCTGCAATTCTTGGTGATAGAGAAGAGGATGCTGATGCTGATGATGGTGCTAGTGATTTCAACTATACTTCAGAAAACCAAAACGAGAAACAAAAGATTGCAGAGCGCATGTTGAGCTGGCACATGACATATGGGCGAGGAGAGGATATTGGGGGTCCAAACTATGATAAAGAGGTTTCTCACAATCACATCCCTCTGCTCACTAATGGAACAGAGGTTTCCGGAGAACTGTCTGCTGCCTCACCAGGGCGCCTTTCCATGGCATCGCCTGGAGCTTCTATTGGTGGAAAGCGGGTCCATCCTCTTCCTTATGCATCGGATGTTAATCAATCACCTAATTTAAGGGTTGTGGATCCTGTGAGAGAGTTTGGTTCTCCCGGGATAGGTAATGTAGCATGGAAAGAGAGAGTGGATGGCTGGAAGATGAAGCAGGAGAAGAATACTATTCCAATGAGCACTGGTCAAGCTACTTCAGAAAGAGGGGTGGGGATATTGATGCCAGCACTGATGAATGATGAAGCAAGGCAACCTCTCTCTAGAAAGGTCTCTATTCCATCGTCTAGGATAAATCCTTACAGGATGGTCATTGTACTGCGGCTGGTTATTCTCTGTATTTTCTTGCACTATCGGTTAACAAATCCTGTGCGCAATGCCTATGCCCTGTGGTTGATATCAGTCATTTGTGAGATTTGGTTCGCAATATCTTGGATTCTTGATCAGTTCCCTAAGTGGCTGCCTGTAAATCGTGAAACATATCTCGACAGACTTTCTCTGAGATATGACCGAGAAGGAGAACCATCACAGTTAGCTGCTGTTGACATCTTCGTCAGTACTGTGGATCCACTGAAGGAGCCTCCTATGGTGACAGCAAATACTGTGCTATCTATTCTTGCAGTTGACTATCCAGTTGACAAGGTTTCTTGCTATGTTTCTGATGATGGAGCTGCAATGTTGACATTTGAAGCTCTCTCTGAAACTTCAGAATTTGCAAGGAAATGGGTCCCTTTCTGCAAGAAGTATGCCATAGAGCCTAGGGCTCCTGAATGGTACTTTTCACAGAAAATTGATTACTTGAAGGATAAAGTACAACCATCATTTGTCAAGGACCGCAGAGCAATGAAGAGAGAATACGAAGAATTTAAAGTTCGTGTGAATGGGCTTGTTGCAAAGGCAACAAAAGTACCAGAAGAAGGATGGATCATGCAAGACGGTACTCCATGGCCTGGAAATAATACTAGAGACCATCCAGGAATGATCCAGGTTTTCTTGGGTCAAAGTGGAGGGCTTGATGCTGAGGGTAATGAACTGCCACGTTTAGTGTATGTTTCTCGTGAAAAGCGTCCAGGTTTCCAACATCACAAGAAGGCTGGTGCTATGAATGCACTTGTTCGAGTATCTGCAGTCCTCACGAATGGACCTTTCTTGTTGAATCTTGATTGTGATCACTACATTAACAATAGTAAGGCCTTGAGGGAAGCAATGTGCTTTCTAATGGATCCTAACCTTGGAAAAAACGTGTGCTATGTTCAGTTTCCACAGAGATTTGATGGCATTGATAGAAATGATCGTTACGCCAATCGAAATACTGTTTTCTTTGATATTAACTTGAGAGGTTTAGATGGTATCCAAGGCCCAGTTTATGTGGGTACTGGATGTGTTTTCAATAGAACAGCCTTGTATGGTTATGAACCTCCTCTCAAGGTTAAGAATAAGAAAGCTGGAGTTCTTTCTTCACTTTGTGGTGGATCACGAAAGAAGGGTTCAAAATCAGGTAAAAAAGGCTCAGACAAGAAGAAATCAAGTAAGCATATGGATCCTACTGTGCCGATTTTCAGTCTAGAGGATATTGAAGAGGGGGTTGAAGGTACTGGATTCGATGACGAGAAGTCATTATTGATGTCACAAATGAGCCTGGAGAAAAGATTTGGTCAGTCTGCTGTTTTCGTTGCTTCGACACTCATGGAGAATGGTGGTGTTCCTCAATCTGCGACACCCGAAACTCTTCTTAAAGAAGCAATTCATGTTATCAGCTGTGGGTATGAAGACAAAAGTGACTGGGGACAAGAGATTGGATGGATTTATGGTTCTGTCACAGAGGATATTCTTACAGGATTCAAGATGCATGCCCGTGGCTGGAGGTCTATTTACTGCATGCCTAAGCGCCCAGCCTTTAAAGGGTCTGCTCCCATTAATCTTTCAGATCGTCTCAATCAAGTGCTTCGATGGGCGTTGGGTTCTGTGGAAATTCTTCTTAGTCGGCATTGTCCTATCTGGTATGGCTATAGTGGTAGGCTAAAATGGCTGGAGAGATTTGCATATGTGAACACTACCATTTATCCAATTACTGCCATACCTCTTCTTGCGTACTGTACATTGCCGGCCGTCTGTCTTCTTACCAACAAATTCATCATTCCGCAGATTAGCAACATTGCAAGTATATGGTTCATCTCCCTCTTTCTTTCCATCTTTGCAACTGGTATTCTAGAGATGAGATGGAGTGGTGTTGGAATTGACGAGTGGTGGAGAAATGAACAATTTTGGGTTATCGGTGGTGTTTCAGCCCATCTTTTTGCTGTCGTCCAGGGTCTCCTGAAAGTACTTGCAGGTATTGACACCAACTTCACTGTCACCTCCAAGGCGTCAGATGAAGACGGAGACTTTGCTGAACTCTACATGTTTAAATGGACTACCCTTCTCATCCCCCCAACAACTCTCCTCATCATAAACTTGGTGGGGGTGGTTGCCGGTATATCTTATGCTGTCAACAGTGGTTACCAGTCATGGGGTCCCCTCTTTGGTAAGCTCTTCTTTGCCTTTTGGGTGATTGTCCATTTGTATCCCTTCCTCAAAGGTCTTATGGGACGTCAGAACCGTACGCCTACAATTGTTGTCGTGTGGTCAATTCTCCTGGCTTCAATTTTCTCTTTGTTGTGGGTGAGGGTTGATCCATTTACCACAAGAGTCACTGGTCCAGATGTTGAGGTGTGTGGAATCAACTGCTAG

Protein Analysis

1171

Amino Acids

131.33

Weight (kDa)

6.96

Isoelectric Point (pI)

36.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-UDP PF14569 106 - 182 1.3e-40 Zinc-binding RING-finger
Cellulose_synt PF03552 443 - 1165 0.0 Cellulose synthase
Glyco_trans_2_3 PF13632 859 - 965 2.9e-07 Glycosyl transferase family group 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1337
AatII GACGTC 2 cut(s) 411, 3379
Acc16I TGCGCA 1 cut(s) 1160
Acc36I ACCTGC 1 cut(s) 3107
AccB1I GGYRCC 1 cut(s) 762
AccB7I CCANNNNNTGG 1 cut(s) 1736
AccIII TCCGGA 1 cut(s) 734
AciI CCGC 4 cut(s) 805, 1108, 1621, 2927
AcoI YGGCCR 1 cut(s) 2892
AcsI RAATTY 4 cut(s) 1496, 1649, 2757, 2915
AcuI CTGAAG 4 cut(s) 567, 969, 1379, 1476
AcyI GRCGYC 4 cut(s) 408, 763, 3152, 3376
AdeI CACNNNGTG 1 cut(s) 2252
AflIII ACRYGT 2 cut(s) 2028, 3186
AhdI GACNNNNNGTC 1 cut(s) 2398
AjnI CCWGG 9 cut(s) 757, 781, 1735, 1759, 1770, 1855, 2424, 3093, 3420
AloI GAACNNNNNNTCC 2 cut(s) 2581, 2613
Alw21I GWGCWC 1 cut(s) 971
Alw26I GTCTC 5 cut(s) 1063, 1746, 2723, 3104, 3162
AlwNI CAGNNNCTG 1 cut(s) 383
Ama87I CYCGRG 1 cut(s) 890
Aor13HI TCCGGA 1 cut(s) 734
AoxI GGCC 6 cut(s) 253, 431, 1733, 1977, 2143, 2892
ApeKI GCWGC 4 cut(s) 749, 1246, 1322, 1457
ApoI RAATTY 4 cut(s) 1496, 1649, 2757, 2915
ArsI GACNNNNNNTTYG 2 cut(s) 3155, 3187
AseI ATTAAT 1 cut(s) 2703
Asp700I GAANNNNTTC 3 cut(s) 2514, 2529, 2760
AspA2I CCTAGG 1 cut(s) 1544
AspLEI GCGC 4 cut(s) 621, 765, 1161, 2676
AspS9I GGNCC 8 cut(s) 668, 808, 1513, 1618, 1928, 2144, 3299, 3482
AsuC2I CCSGG 2 cut(s) 891, 892
AsuHPI GGTGA 8 cut(s) 398, 539, 747, 837, 1387, 3133, 3346, 3460
AvaI CYCGRG 1 cut(s) 890
AvaII GGWCC 7 cut(s) 668, 808, 1513, 1618, 1928, 3299, 3482
AvrII CCTAGG 1 cut(s) 1544
BaeI ACNNNNGTAYC 2 cut(s) 1677, 1710
BamHI GGATCC 4 cut(s) 865, 1351, 2008, 2326
BanI GGYRCC 1 cut(s) 762
BanII GRGCYC 1 cut(s) 1552
BarI GAAGNNNNNNTAC 2 cut(s) 1625, 1657
BauI CACGAG 1 cut(s) 1842
BbsI GAAGAC 4 cut(s) 380, 2562, 2894, 3168
Bbv12I GWGCWC 1 cut(s) 971
BbvCI CCTCAGC 1 cut(s) 1806
BbvI GCAGC 4 cut(s) 736, 1233, 1309, 1444
BceAI ACGGC 1 cut(s) 2879
BciT130I CCWGG 9 cut(s) 759, 783, 1737, 1761, 1772, 1857, 2426, 3095, 3422
BciVI GTATCC 2 cut(s) 2147, 3360
BclI TGATCA 2 cut(s) 1228, 1954
BcnI CCSGG 2 cut(s) 891, 892
BcoDI GTCTC 5 cut(s) 1063, 1746, 2723, 3104, 3162
BfaI CTAG 9 cut(s) 69, 564, 1050, 1074, 1545, 1749, 2351, 2996, 3514
BfmI CTRYAG 2 cut(s) 1911, 2794
BfoI RGCGCY 2 cut(s) 766, 2677
BfuAI ACCTGC 1 cut(s) 3107
BfuI GTATCC 2 cut(s) 2147, 3360
BglII AGATCT 1 cut(s) 351
BisI GCNGC 5 cut(s) 750, 1109, 1247, 1323, 1458
BlnI CCTAGG 1 cut(s) 1544
BlsI GCNGC 5 cut(s) 751, 1110, 1248, 1324, 1459
BmcAI AGTACT 2 cut(s) 1345, 3111
Bme18I GGWCC 7 cut(s) 668, 808, 1513, 1618, 1928, 3299, 3482
BmeRI GACNNNNNGTC 1 cut(s) 2398
BmeT110I CYCGRG 1 cut(s) 890
BmgT120I GGNCC 8 cut(s) 668, 808, 1513, 1618, 1928, 2144, 3299, 3482
BmrI ACTGGG 3 cut(s) 214, 2141, 2578
BmsI GCATC 8 cut(s) 9, 532, 538, 785, 836, 999, 1792, 2622
BmuI ACTGGG 3 cut(s) 214, 2141, 2578
BpiI GAAGAC 4 cut(s) 380, 2562, 2894, 3168
BpmI CTGGAG 6 cut(s) 29, 804, 2253, 2447, 2668, 2837
Bpu10I CCTNAGC 2 cut(s) 1806, 2670
BpuEI CTTGAG 3 cut(s) 2002, 2140, 2195
BpuMI CCSGG 2 cut(s) 891, 892
BsaBI GATNNNNATC 4 cut(s) 135, 462, 837, 1953
BsaHI GRCGYC 4 cut(s) 408, 763, 3152, 3376
BsaI GGTCTC 3 cut(s) 1063, 1746, 3104
BsaWI WCCGGW 1 cut(s) 734
Bse118I RCCGGY 2 cut(s) 2890, 3257
Bse3DI GCAATG 7 cut(s) 396, 1168, 1467, 1635, 1998, 2885, 2940
Bse8I GATNNNNATC 4 cut(s) 135, 462, 837, 1953
BseAI TCCGGA 1 cut(s) 734
BseBI CCWGG 9 cut(s) 759, 783, 1737, 1761, 1772, 1857, 2426, 3095, 3422
BseJI GATNNNNATC 4 cut(s) 135, 462, 837, 1953
BseMI GCAATG 7 cut(s) 396, 1168, 1467, 1635, 1998, 2885, 2940
BseMII CTCAG 4 cut(s) 300, 1277, 1797, 2310
BseRI GAGGAG 3 cut(s) 666, 2196, 3218
BseX3I CGGCCG 1 cut(s) 2892
BseXI GCAGC 4 cut(s) 736, 1233, 1309, 1444
BseYI CCCAGC 1 cut(s) 2677
Bsh1285I CGRYCG 1 cut(s) 2895
BshFI GGCC 6 cut(s) 255, 433, 1735, 1979, 2145, 2894
BshNI GGYRCC 1 cut(s) 762
BsiEI CGRYCG 1 cut(s) 2895
BsiHKAI GWGCWC 1 cut(s) 971
BsiHKCI CYCGRG 1 cut(s) 890
BsiSI CCGG 4 cut(s) 735, 891, 2891, 3258
BsiWI CGTACG 1 cut(s) 3386
BslFI GGGAC 4 cut(s) 1499, 2586, 3285, 3387
BsmAI GTCTC 5 cut(s) 1063, 1746, 2723, 3104, 3162
BsmBI CGTCTC 1 cut(s) 2723
BsmFI GGGAC 4 cut(s) 1499, 2586, 3285, 3387
BsmI GAATGC 1 cut(s) 1897
BsnI GGCC 6 cut(s) 255, 433, 1735, 1979, 2145, 2894
Bso31I GGTCTC 3 cut(s) 1063, 1746, 3104
BsoBI CYCGRG 1 cut(s) 890
Bsp1286I GDGCHC 2 cut(s) 971, 1552
Bsp13I TCCGGA 1 cut(s) 734
Bsp1407I TGTACA 1 cut(s) 2882
Bsp19I CCATGG 2 cut(s) 771, 1730
BspACI CCGC 4 cut(s) 805, 1108, 1621, 2927
BspANI GGCC 6 cut(s) 255, 433, 1735, 1979, 2145, 2894
BspCNI CTCAG 4 cut(s) 301, 1278, 1798, 2309
BspEI TCCGGA 1 cut(s) 734
BspMAI CTGCAG 1 cut(s) 1915
BspMI ACCTGC 1 cut(s) 3107
BspQI GCTCTTC 1 cut(s) 3323
BspT107I GGYRCC 1 cut(s) 762
BspTNI GGTCTC 3 cut(s) 1063, 1746, 3104
BsrDI GCAATG 7 cut(s) 396, 1168, 1467, 1635, 1998, 2885, 2940
BsrFI RCCGGY 2 cut(s) 2890, 3257
BsrGI TGTACA 1 cut(s) 2882
BssAI RCCGGY 2 cut(s) 2890, 3257
BssNI GRCGYC 4 cut(s) 408, 763, 3152, 3376
BssSI CACGAG 1 cut(s) 1842
BssT1I CCWWGG 6 cut(s) 771, 1544, 1730, 2017, 2140, 3147
Bst2BI CACGAG 1 cut(s) 1842
Bst2UI CCWGG 9 cut(s) 759, 783, 1737, 1761, 1772, 1857, 2426, 3095, 3422
Bst6I CTCTTC 7 cut(s) 531, 822, 1628, 2358, 2520, 2874, 3323
BstACI GRCGYC 4 cut(s) 408, 763, 3152, 3376
BstAPI GCANNNNNTGC 1 cut(s) 435
BstAUI TGTACA 1 cut(s) 2882
BstC8I GCNNGC 7 cut(s) 403, 431, 632, 1014, 2637, 2666, 2892
BstDEI CTNAG 7 cut(s) 309, 1239, 1286, 1806, 2296, 2670, 2765
BstDSI CCRYGG 3 cut(s) 771, 1730, 2641
BstEII GGTNACC 1 cut(s) 3284
BstH2I RGCGCY 2 cut(s) 766, 2677
BstHHI GCGC 4 cut(s) 621, 765, 1161, 2676
BstMAI GTCTC 5 cut(s) 1063, 1746, 2723, 3104, 3162
BstMCI CGRYCG 1 cut(s) 2895
BstMWI GCNNNNNNNGC 7 cut(s) 19, 411, 435, 480, 627, 1892, 2812
BstNI CCWGG 9 cut(s) 759, 783, 1737, 1761, 1772, 1857, 2426, 3095, 3422
BstNSI RCATGY 4 cut(s) 625, 2639, 2668, 3190
BstPI GGTNACC 1 cut(s) 3284
BstSFI CTRYAG 2 cut(s) 1911, 2794
BstV1I GCAGC 4 cut(s) 736, 1233, 1309, 1444
BstV2I GAAGAC 4 cut(s) 380, 2562, 2894, 3168
BstX2I RGATCY 6 cut(s) 85, 351, 865, 1351, 2008, 2326
BstXI CCANNNNNNTGG 1 cut(s) 356
BstYI RGATCY 6 cut(s) 85, 351, 865, 1351, 2008, 2326
BstZI CGGCCG 1 cut(s) 2892
BsuI GTATCC 2 cut(s) 2147, 3360
BsuRI GGCC 6 cut(s) 255, 433, 1735, 1979, 2145, 2894
BtgI CCRYGG 3 cut(s) 771, 1730, 2641
BtgZI GCGATG 1 cut(s) 762
BtsIMutI CAGTG 6 cut(s) 969, 1016, 1355, 3135, 3286, 3477
BveI ACCTGC 1 cut(s) 3107
Cac8I GCNNGC 7 cut(s) 403, 431, 632, 1014, 2637, 2666, 2892
CaiI CAGNNNCTG 1 cut(s) 383
CfoI GCGC 4 cut(s) 621, 765, 1161, 2676
Cfr10I RCCGGY 2 cut(s) 2890, 3257
Cfr13I GGNCC 8 cut(s) 668, 808, 1513, 1618, 1928, 2144, 3299, 3482
Cfr9I CCCGGG 1 cut(s) 890
CseI GACGC 2 cut(s) 1841, 3141
DdeI CTNAG 7 cut(s) 309, 1239, 1286, 1806, 2296, 2670, 2765
DinI GGCGCC 1 cut(s) 764
DraI TTTAAA 3 cut(s) 1654, 2686, 3193
DraIII CACNNNGTG 1 cut(s) 2252
DrdI GACNNNNNNGTC 1 cut(s) 1337
DriI GACNNNNNGTC 1 cut(s) 2398
DseDI GACNNNNNNGTC 1 cut(s) 1337
EaeI YGGCCR 1 cut(s) 2892
EagI CGGCCG 1 cut(s) 2892
Eam1104I CTCTTC 7 cut(s) 531, 822, 1628, 2358, 2520, 2874, 3323
Eam1105I GACNNNNNGTC 1 cut(s) 2398
EarI CTCTTC 7 cut(s) 531, 822, 1628, 2358, 2520, 2874, 3323
EclXI CGGCCG 1 cut(s) 2892
Eco130I CCWWGG 6 cut(s) 771, 1544, 1730, 2017, 2140, 3147
Eco147I AGGCCT 1 cut(s) 1979
Eco24I GRGCYC 1 cut(s) 1552
Eco31I GGTCTC 3 cut(s) 1063, 1746, 3104
Eco32I GATATC 1 cut(s) 1185
Eco47I GGWCC 7 cut(s) 668, 808, 1513, 1618, 1928, 3299, 3482
Eco52I CGGCCG 1 cut(s) 2892
Eco57I CTGAAG 4 cut(s) 567, 969, 1379, 1476
Eco88I CYCGRG 1 cut(s) 890
Eco91I GGTNACC 1 cut(s) 3284
EcoO109I RGGNCCY 2 cut(s) 1513, 3299
EcoO65I GGTNACC 1 cut(s) 3284
EcoRII CCWGG 9 cut(s) 757, 781, 1735, 1759, 1770, 1855, 2424, 3093, 3420
EcoRV GATATC 1 cut(s) 1185
EcoT14I CCWWGG 6 cut(s) 771, 1544, 1730, 2017, 2140, 3147
EcoT22I ATGCAT 2 cut(s) 829, 2637
EcoT38I GRGCYC 1 cut(s) 1552
EgeI GGCGCC 1 cut(s) 764
EheI GGCGCC 1 cut(s) 764
ErhI CCWWGG 6 cut(s) 771, 1544, 1730, 2017, 2140, 3147
Esp3I CGTCTC 1 cut(s) 2723
FalI AAGNNNNNCTT 2 cut(s) 3305, 3337
FaqI GGGAC 4 cut(s) 1499, 2586, 3285, 3387
FauI CCCGC 1 cut(s) 798
FauNDI CATATG 3 cut(s) 643, 2322, 2830
FbaI TGATCA 2 cut(s) 1228, 1954
Fnu4HI GCNGC 5 cut(s) 750, 1109, 1247, 1323, 1458
FriOI GRGCYC 1 cut(s) 1552
Fsp4HI GCNGC 5 cut(s) 750, 1109, 1247, 1323, 1458
FspBI CTAG 9 cut(s) 69, 564, 1050, 1074, 1545, 1749, 2351, 2996, 3514
FspI TGCGCA 1 cut(s) 1160
GlaI GCGC 4 cut(s) 620, 764, 1160, 2675
GluI GCNGC 5 cut(s) 750, 1109, 1247, 1323, 1458
GsaI CCCAGC 1 cut(s) 2681
GsuI CTGGAG 6 cut(s) 29, 804, 2253, 2447, 2668, 2837
HaeII RGCGCY 2 cut(s) 766, 2677
HaeIII GGCC 6 cut(s) 255, 433, 1735, 1979, 2145, 2894
HapII CCGG 4 cut(s) 735, 891, 2891, 3258
HgaI GACGC 2 cut(s) 1841, 3141
HhaI GCGC 4 cut(s) 621, 765, 1161, 2676
Hin1I GRCGYC 4 cut(s) 408, 763, 3152, 3376
Hin6I GCGC 4 cut(s) 619, 763, 1159, 2674
HinP1I GCGC 4 cut(s) 619, 763, 1159, 2674
HincII GTYRAC 6 cut(s) 1146, 1330, 1411, 1423, 1467, 3277
HindII GTYRAC 6 cut(s) 1146, 1330, 1411, 1423, 1467, 3277
HinfI GANTC 7 cut(s) 293, 1222, 1942, 2385, 2625, 3474, 3504
HpaI GTTAAC 1 cut(s) 1146
HpaII CCGG 4 cut(s) 735, 891, 2891, 3258
HphI GGTGA 8 cut(s) 398, 539, 747, 837, 1387, 3133, 3346, 3460
Hpy166II GTNNAC 9 cut(s) 52, 389, 1146, 1330, 1411, 1423, 1467, 2836, 3277
Hpy8I GTNNAC 9 cut(s) 52, 389, 1146, 1330, 1411, 1423, 1467, 2836, 3277
Hpy99I CGWCG 1 cut(s) 410
HpyCH4IV ACGT 4 cut(s) 408, 1825, 2028, 3376
HpyF10VI GCNNNNNNNGC 7 cut(s) 19, 411, 435, 480, 627, 1892, 2812
HpyF3I CTNAG 7 cut(s) 309, 1239, 1286, 1806, 2296, 2670, 2765
HpySE526I ACGT 4 cut(s) 408, 1825, 2028, 3376
Hsp92I GRCGYC 4 cut(s) 408, 763, 3152, 3376
HspAI GCGC 4 cut(s) 619, 763, 1159, 2674
KasI GGCGCC 1 cut(s) 762
KflI GGGWCCC 2 cut(s) 1513, 3299
Kpn2I TCCGGA 1 cut(s) 734
KroI GCCGGC 1 cut(s) 2890
KroNI GCCGGC 1 cut(s) 2892
Ksp22I TGATCA 2 cut(s) 1228, 1954
KspAI GTTAAC 1 cut(s) 1146
LguI GCTCTTC 1 cut(s) 3323
LmnI GCTCC 7 cut(s) 4, 10, 785, 1363, 1454, 1555, 2701
Lsp1109I GCAGC 4 cut(s) 736, 1233, 1309, 1444
LweI GCATC 8 cut(s) 9, 532, 538, 785, 836, 999, 1792, 2622
MaeI CTAG 9 cut(s) 69, 564, 1050, 1074, 1545, 1749, 2351, 2996, 3514
MaeII ACGT 4 cut(s) 408, 1825, 2028, 3376
MaeIII GTNAC 8 cut(s) 1375, 2081, 2412, 2564, 2602, 3139, 3284, 3475
MfeI CAATTG 1 cut(s) 3396
MflI RGATCY 6 cut(s) 85, 351, 865, 1351, 2008, 2326
MhlI GDGCHC 2 cut(s) 971, 1552
Mly113I GGCGCC 1 cut(s) 763
MlyI GAGTC 2 cut(s) 302, 3483
MmeI TCCRAC 3 cut(s) 276, 1888, 2998
Mph1103I ATGCAT 2 cut(s) 829, 2637
MroI TCCGGA 1 cut(s) 734
MroNI GCCGGC 1 cut(s) 2890
MroXI GAANNNNTTC 3 cut(s) 2514, 2529, 2760
MslI CAYNNNNRTG 1 cut(s) 2640
MspA1I CMGCKG 1 cut(s) 2544
MspI CCGG 4 cut(s) 735, 891, 2891, 3258
MunI CAATTG 1 cut(s) 3396
Mva1269I GAATGC 1 cut(s) 1897
MvaI CCWGG 9 cut(s) 759, 783, 1737, 1761, 1772, 1857, 2426, 3095, 3422
MwoI GCNNNNNNNGC 7 cut(s) 19, 411, 435, 480, 627, 1892, 2812
NaeI GCCGGC 1 cut(s) 2892
NarI GGCGCC 1 cut(s) 763
NciI CCSGG 2 cut(s) 891, 892
NcoI CCATGG 2 cut(s) 771, 1730
NdeI CATATG 3 cut(s) 643, 2322, 2830
NgoMIV GCCGGC 1 cut(s) 2890
NmuCI GTSAC 6 cut(s) 1375, 2412, 2564, 2602, 3139, 3475
NsbI TGCGCA 1 cut(s) 1160
NsiI ATGCAT 2 cut(s) 829, 2637
NspI RCATGY 4 cut(s) 625, 2639, 2668, 3190
PaeI GCATGC 2 cut(s) 2639, 2668
PceI AGGCCT 1 cut(s) 1979
PciI ACATGT 1 cut(s) 3186
PciSI GCTCTTC 1 cut(s) 3323
PcsI WCGNNNNNNNCGW 2 cut(s) 1849, 3382
PctI GAATGC 1 cut(s) 1897
PdiI GCCGGC 1 cut(s) 2892
PdmI GAANNNNTTC 3 cut(s) 2514, 2529, 2760
PfeI GAWTC 5 cut(s) 1222, 1942, 2385, 2625, 3504
Pfl23II CGTACG 1 cut(s) 3386
PflMI CCANNNNNTGG 1 cut(s) 1736
PfoI TCCNGGA 1 cut(s) 1759
PkrI GCNGC 5 cut(s) 751, 1110, 1248, 1324, 1459
PleI GAGTC 2 cut(s) 301, 3482
PluTI GGCGCC 1 cut(s) 766
PpsI GAGTC 2 cut(s) 301, 3482
PpuMI RGGWCCY 2 cut(s) 1513, 3299
PscI ACATGT 1 cut(s) 3186
PshBI ATTAAT 1 cut(s) 2703
Psp5II RGGWCCY 2 cut(s) 1513, 3299
Psp6I CCWGG 9 cut(s) 757, 781, 1735, 1759, 1770, 1855, 2424, 3093, 3420
PspEI GGTNACC 1 cut(s) 3284
PspFI CCCAGC 1 cut(s) 2677
PspGI CCWGG 9 cut(s) 757, 781, 1735, 1759, 1770, 1855, 2424, 3093, 3420
PspLI CGTACG 1 cut(s) 3386
PspPI GGNCC 8 cut(s) 668, 808, 1513, 1618, 1928, 2144, 3299, 3482
PspPPI RGGWCCY 2 cut(s) 1513, 3299
PstI CTGCAG 1 cut(s) 1915
PstNI CAGNNNCTG 1 cut(s) 383
PsuI RGATCY 6 cut(s) 85, 351, 865, 1351, 2008, 2326
PvuII CAGCTG 1 cut(s) 2544
RseI CAYNNNNRTG 1 cut(s) 2640
SapI GCTCTTC 1 cut(s) 3323
SatI GCNGC 5 cut(s) 750, 1109, 1247, 1323, 1458
Sau96I GGNCC 8 cut(s) 668, 808, 1513, 1618, 1928, 2144, 3299, 3482
ScaI AGTACT 2 cut(s) 1345, 3111
SchI GAGTC 2 cut(s) 302, 3483
SduI GDGCHC 2 cut(s) 971, 1552
SfaNI GCATC 8 cut(s) 9, 532, 538, 785, 836, 999, 1792, 2622
SfcI CTRYAG 2 cut(s) 1911, 2794
SfoI GGCGCC 1 cut(s) 764
SinI GGWCC 7 cut(s) 668, 808, 1513, 1618, 1928, 3299, 3482
SmaI CCCGGG 1 cut(s) 892
SmiMI CAYNNNNRTG 1 cut(s) 2640
SmlI CTYRAG 3 cut(s) 1981, 2119, 2210
SmoI CTYRAG 3 cut(s) 1981, 2119, 2210
SphI GCATGC 2 cut(s) 2639, 2668
SseBI AGGCCT 1 cut(s) 1979
SsiI CCGC 4 cut(s) 805, 1108, 1621, 2927
SspDI GGCGCC 1 cut(s) 762
SspMI CTAG 9 cut(s) 69, 564, 1050, 1074, 1545, 1749, 2351, 2996, 3514
StuI AGGCCT 1 cut(s) 1979
StyI CCWWGG 6 cut(s) 771, 1544, 1730, 2017, 2140, 3147
TaiI ACGT 4 cut(s) 411, 1828, 2031, 3379
TaqI TCGA 6 cut(s) 1272, 1903, 2092, 2388, 2465, 2734
TaqII GACCGA 1 cut(s) 1311
TatI WGTACW 5 cut(s) 1102, 1343, 1597, 2882, 3109
TauI GCSGC 1 cut(s) 1111
TfiI GAWTC 5 cut(s) 1222, 1942, 2385, 2625, 3504
TscAI CASTG 6 cut(s) 976, 1023, 1362, 3142, 3286, 3484
TseFI GTSAC 6 cut(s) 1375, 2412, 2564, 2602, 3139, 3475
TseI GCWGC 4 cut(s) 749, 1246, 1322, 1457
Tsp45I GTSAC 6 cut(s) 1375, 2412, 2564, 2602, 3139, 3475
TspGWI ACGGA 1 cut(s) 3180
TspMI CCCGGG 1 cut(s) 890
TspRI CASTG 6 cut(s) 976, 1023, 1362, 3142, 3286, 3484
Van91I CCANNNNNTGG 1 cut(s) 1736
VpaK11BI GGWCC 7 cut(s) 668, 808, 1513, 1618, 1928, 3299, 3482
VspI ATTAAT 1 cut(s) 2703
XapI RAATTY 4 cut(s) 1496, 1649, 2757, 2915
XbaI TCTAGA 3 cut(s) 1049, 2350, 2995
XceI RCATGY 4 cut(s) 625, 2639, 2668, 3190
XcmI CCANNNNNNNNNTGG 1 cut(s) 1704
XmaI CCCGGG 1 cut(s) 890
XmaJI CCTAGG 1 cut(s) 1544
XmnI GAANNNNTTC 3 cut(s) 2514, 2529, 2760
XspI CTAG 9 cut(s) 69, 564, 1050, 1074, 1545, 1749, 2351, 2996, 3514
ZraI GACGTC 2 cut(s) 409, 3377
ZrmI AGTACT 2 cut(s) 1345, 3111
Zsp2I ATGCAT 2 cut(s) 829, 2637
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.