pycom02g26140

Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
23990518 .. 23993754
3237 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g26140.4

Sequence Viewer

Length: 1479 bp
ATGGAATCCGAAGGAGAAACTGCGGCAAAGCCCATGAAAAGCCTCGGGGGTCAGGTCTGCCAGATCTGTGGGGATAATGTTGGGAAGACTGCGGATGGGGAACCATTCATTGCCTGCGATGTCTGTGCCTTTCCTGTTTGCAGGCCATGCTATGAGTACGAGAGGAAGGATGGAAATCAGTCTTGCCCTCAATGCAAAACCAGATACAAGAGGCACAAAGGGAGCCCTGCAATTCTTGGTGATAGAGAAGAGGATGCTGTTCCTGATGATGGTACCAGTGATTTCAACTATACTTCAGAAAATCAAAACGAGAAGCAAAAGATTGCTGAACGCATGCTAAGCTGGCATATGACATATGGCCGGGGAGAGGATGTTTCGGCTCCAAATTATGATAAAGAGGTTTCTCACAATCACATCCCTCTACTCACTAGTGGACAAGAGGTTTCCGGAGAACTGTCTGCCGCTTCACCAGAGCGCCTTTCGATGGCATCTCCTGGAGTTGGTGCTGGAAAGCGTGTGCATCATCATTCTTATGGATCAGATGTTAACCAATCCCCTAATATAAGGGTTGTGGATCCTGTGAGGGAGTTTGGTTCTCCCGGGATAGGAAATGTAGCATGGAAAGAGAGAGTGGATGGCTGGAAGATGAAGCAAGAGAAGAATGTCATTCCAATGAGCACTGGACAAGCTACTTCTGAAAGAGGCGGTGGAGATATTGATGCCAGATCTGATGTGATTGTGGATGACTCTTTGCTGAATGATGAAGCAAGGCAGCCTCTCTCCAGAAAGGTCTCGATTCCATCATCTAGAATAAATCCTTACAGAATGGTCATTGTTCTGCGGCTTATTATTCTGTGCATTTTCTTGCACTATCGAATAACAAATCCTGTGCCCAATGCCTATGCTCTGTGGCTGATATCAGTCATTTGTGAGATTTGGTTTGCAATTTCCTGGATTCTCGATCAGTTCCCTAAGTGGCTCCCCGTTAATCGTGAAACATATCTTGACAGACTTTCGTTGAGATATGACCGAGAAGGAGAACCATCAAATTTAGCTGCTGTTGACATCTTTGTCAGTACTGTCGATCCGTTGAAGGAGCCTCCTATGGTGACAGCAAATACTGTGCTATCTATTCTTGCAGTTGACTACCCAGTTGACAAGGTTTCTTGCTATGTTTCTGATGATGGAGCCGCAATGTTGACGTTTGAAGCTCTGTCTGAAACTTCAGAATTTGCTAGGAAATGGGTCCCTTTCTGCAAGAAATATGCTATTGAGCCTCGGGCTCCAGAATGGTATTTTTCACAGAAGATTGATTACTTAAAGGATAAAGTTCAACCATCATTTGTCAAAGAGCGTAGAGCGATGAAGAGAGAATATGAAGAATTTAAAGTTCGTGTTAACGGGCTTGTTGCAAAGGCCACAAAAATACCCGAAGAAGGATGGATCGATTCTAGATGGTACTCCATGGCCTGGAAATAA

Protein Analysis

493

Amino Acids

55.5

Weight (kDa)

5.79

Isoelectric Point (pI)

46.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1070
Acc65I GGTACC 1 cut(s) 272
AccB1I GGYRCC 1 cut(s) 272
AccB7I CCANNNNNTGG 1 cut(s) 1470
AccIII TCCGGA 1 cut(s) 446
AciI CCGC 6 cut(s) 23, 92, 462, 705, 841, 1191
AclWI GGATC 5 cut(s) 544, 569, 582, 1079, 1451
AcoI YGGCCR 1 cut(s) 358
AcsI RAATTY 3 cut(s) 1048, 1229, 1382
AcuI CTGAAG 2 cut(s) 279, 1209
AfaI GTAC 4 cut(s) 158, 274, 1078, 1460
AfiI CCNNNNNNNGG 7 cut(s) 269, 367, 484, 500, 605, 1436, 1470
AgsI TTSAA 4 cut(s) 286, 1093, 1208, 1334
AhlI ACTAGT 1 cut(s) 428
AjnI CCWGG 3 cut(s) 493, 950, 1469
AluBI AGCT 4 cut(s) 342, 689, 1055, 1211
AluI AGCT 4 cut(s) 342, 689, 1055, 1211
Alw21I GWGCWC 1 cut(s) 680
Alw26I GTCTC 1 cut(s) 796
AlwI GGATC 5 cut(s) 544, 569, 582, 1079, 1451
Ama87I CYCGRG 3 cut(s) 44, 599, 1278
Aor13HI TCCGGA 1 cut(s) 446
AoxI GGCC 4 cut(s) 143, 358, 1416, 1467
ApeKI GCWGC 2 cut(s) 772, 1055
ApoI RAATTY 3 cut(s) 1048, 1229, 1382
Asp718I GGTACC 1 cut(s) 272
AspLEI GCGC 1 cut(s) 477
AspS9I GGNCC 1 cut(s) 1246
AsuC2I CCSGG 3 cut(s) 362, 600, 601
AsuHPI GGTGA 3 cut(s) 251, 459, 1120
AvaI CYCGRG 3 cut(s) 44, 599, 1278
AvaII GGWCC 1 cut(s) 1246
BaeGI GKGCMC 1 cut(s) 894
BamHI GGATCC 1 cut(s) 574
BanI GGYRCC 1 cut(s) 272
BanII GRGCYC 2 cut(s) 227, 1285
BarI GAAGNNNNNNTAC 2 cut(s) 1298, 1330
BbsI GAAGAC 1 cut(s) 92
Bbv12I GWGCWC 1 cut(s) 680
BbvI GCAGC 2 cut(s) 784, 1042
BcgI CGANNNNNNTGC 2 cut(s) 107, 141
BciT130I CCWGG 3 cut(s) 495, 952, 1471
BcnI CCSGG 3 cut(s) 362, 600, 601
BcoDI GTCTC 1 cut(s) 796
BcuI ACTAGT 1 cut(s) 428
BfaI CTAG 4 cut(s) 429, 807, 1236, 1452
BfoI RGCGCY 1 cut(s) 478
BglII AGATCT 2 cut(s) 63, 725
BisI GCNGC 6 cut(s) 24, 462, 773, 842, 1056, 1191
BlpI GCTNAGC 1 cut(s) 338
BlsI GCNGC 6 cut(s) 25, 463, 774, 843, 1057, 1192
BmcAI AGTACT 1 cut(s) 1078
Bme1390I CCNGG 6 cut(s) 362, 495, 600, 601, 952, 1471
Bme18I GGWCC 1 cut(s) 1246
BmeT110I CYCGRG 3 cut(s) 44, 599, 1278
BmgT120I GGNCC 1 cut(s) 1246
BmrFI CCNGG 6 cut(s) 362, 495, 600, 601, 952, 1471
BmrI ACTGGG 1 cut(s) 1145
BmsI GCATC 4 cut(s) 244, 497, 529, 709
BmuI ACTGGG 1 cut(s) 1145
BpiI GAAGAC 1 cut(s) 92
BpmI CTGGAG 3 cut(s) 516, 766, 1269
Bpu1102I GCTNAGC 1 cut(s) 338
BpuMI CCSGG 3 cut(s) 362, 600, 601
Bsa29I ATCGAT 1 cut(s) 1446
BsaBI GATNNNNATC 1 cut(s) 174
BsaI GGTCTC 1 cut(s) 796
BsaJI CCNNGG 5 cut(s) 43, 361, 599, 1277, 1464
BsaWI WCCGGW 1 cut(s) 446
BsaXI ACNNNNNCTCC 2 cut(s) 357, 387
Bsc4I CCNNNNNNNGG 7 cut(s) 269, 367, 484, 500, 605, 1436, 1470
Bse1I ACTGG 3 cut(s) 276, 685, 1151
Bse3DI GCAATG 2 cut(s) 108, 1200
Bse8I GATNNNNATC 1 cut(s) 174
BseAI TCCGGA 1 cut(s) 446
BseBI CCWGG 3 cut(s) 495, 952, 1471
BseCI ATCGAT 1 cut(s) 1446
BseDI CCNNGG 5 cut(s) 43, 361, 599, 1277, 1464
BseGI GGATG 8 cut(s) 100, 175, 259, 376, 414, 640, 748, 1445
BseJI GATNNNNATC 1 cut(s) 174
BseLI CCNNNNNNNGG 7 cut(s) 269, 367, 484, 500, 605, 1436, 1470
BseMI GCAATG 2 cut(s) 108, 1200
BseNI ACTGG 3 cut(s) 276, 685, 1151
BseSI GKGCMC 1 cut(s) 894
BseXI GCAGC 2 cut(s) 784, 1042
BshFI GGCC 4 cut(s) 145, 360, 1418, 1469
BshNI GGYRCC 1 cut(s) 272
BshVI ATCGAT 1 cut(s) 1446
BsiHKAI GWGCWC 1 cut(s) 680
BsiHKCI CYCGRG 3 cut(s) 44, 599, 1278
BsiSI CCGG 3 cut(s) 361, 447, 600
BslFI GGGAC 1 cut(s) 1232
BslI CCNNNNNNNGG 7 cut(s) 269, 367, 484, 500, 605, 1436, 1470
BsmAI GTCTC 1 cut(s) 796
BsmFI GGGAC 1 cut(s) 1232
BsnI GGCC 4 cut(s) 145, 360, 1418, 1469
Bso31I GGTCTC 1 cut(s) 796
BsoBI CYCGRG 3 cut(s) 44, 599, 1278
Bsp1286I GDGCHC 4 cut(s) 227, 680, 894, 1285
Bsp13I TCCGGA 1 cut(s) 446
Bsp143I GATC 7 cut(s) 63, 536, 574, 725, 961, 1084, 1443
Bsp1720I GCTNAGC 1 cut(s) 338
Bsp19I CCATGG 1 cut(s) 1464
BspACI CCGC 6 cut(s) 23, 92, 462, 705, 841, 1191
BspANI GGCC 4 cut(s) 145, 360, 1418, 1469
BspDI ATCGAT 1 cut(s) 1446
BspEI TCCGGA 1 cut(s) 446
BspPI GGATC 5 cut(s) 544, 569, 582, 1079, 1451
BspT107I GGYRCC 1 cut(s) 272
BspTNI GGTCTC 1 cut(s) 796
BsrDI GCAATG 2 cut(s) 108, 1200
BsrI ACTGG 3 cut(s) 276, 685, 1151
BssECI CCNNGG 5 cut(s) 43, 361, 599, 1277, 1464
BssMI GATC 7 cut(s) 63, 536, 574, 725, 961, 1084, 1443
BssT1I CCWWGG 1 cut(s) 1464
Bst2UI CCWGG 3 cut(s) 495, 952, 1471
Bst4CI ACNGT 3 cut(s) 456, 1081, 1123
Bst6I CTCTTC 2 cut(s) 243, 1361
BstAPI GCANNNNNTGC 1 cut(s) 147
BstC8I GCNNGC 4 cut(s) 115, 143, 335, 344
BstDEI CTNAG 2 cut(s) 338, 972
BstDSI CCRYGG 1 cut(s) 1464
BstF5I GGATG 8 cut(s) 100, 175, 259, 376, 414, 640, 748, 1445
BstH2I RGCGCY 1 cut(s) 478
BstHHI GCGC 1 cut(s) 477
BstKTI GATC 7 cut(s) 66, 539, 577, 728, 964, 1087, 1446
BstMAI GTCTC 1 cut(s) 796
BstMBI GATC 7 cut(s) 63, 536, 574, 725, 961, 1084, 1443
BstMWI GCNNNNNNNGC 4 cut(s) 147, 192, 339, 343
BstNI CCWGG 3 cut(s) 495, 952, 1471
BstNSI RCATGY 1 cut(s) 337
BstSCI CCNGG 6 cut(s) 360, 493, 598, 599, 950, 1469
BstSLI GKGCMC 1 cut(s) 894
BstV1I GCAGC 2 cut(s) 784, 1042
BstV2I GAAGAC 1 cut(s) 92
BstX2I RGATCY 3 cut(s) 63, 574, 725
BstXI CCANNNNNNTGG 1 cut(s) 68
BstYI RGATCY 3 cut(s) 63, 574, 725
Bsu15I ATCGAT 1 cut(s) 1446
BsuRI GGCC 4 cut(s) 145, 360, 1418, 1469
BsuTUI ATCGAT 1 cut(s) 1446
BtgI CCRYGG 1 cut(s) 1464
BtgZI GCGATG 2 cut(s) 132, 1376
BtsCI GGATG 8 cut(s) 100, 175, 259, 376, 414, 640, 748, 1445
BtsIMutI CAGTG 2 cut(s) 283, 678
Cac8I GCNNGC 4 cut(s) 115, 143, 335, 344
CfoI GCGC 1 cut(s) 477
Cfr13I GGNCC 1 cut(s) 1246
Cfr9I CCCGGG 1 cut(s) 599
ClaI ATCGAT 1 cut(s) 1446
Csp6I GTAC 4 cut(s) 157, 273, 1077, 1459
CviAII CATG 5 cut(s) 34, 147, 334, 618, 1465
CviQI GTAC 4 cut(s) 157, 273, 1077, 1459
DdeI CTNAG 2 cut(s) 338, 972
DpnI GATC 7 cut(s) 65, 538, 576, 727, 963, 1086, 1445
DpnII GATC 7 cut(s) 63, 536, 574, 725, 961, 1084, 1443
DraI TTTAAA 1 cut(s) 1387
DrdI GACNNNNNNGTC 1 cut(s) 1070
DseDI GACNNNNNNGTC 1 cut(s) 1070
EaeI YGGCCR 1 cut(s) 358
Eam1104I CTCTTC 2 cut(s) 243, 1361
EarI CTCTTC 2 cut(s) 243, 1361
Eco130I CCWWGG 1 cut(s) 1464
Eco24I GRGCYC 2 cut(s) 227, 1285
Eco31I GGTCTC 1 cut(s) 796
Eco32I GATATC 1 cut(s) 918
Eco47I GGWCC 1 cut(s) 1246
Eco57I CTGAAG 2 cut(s) 279, 1209
Eco88I CYCGRG 3 cut(s) 44, 599, 1278
EcoO109I RGGNCCY 1 cut(s) 1246
EcoRII CCWGG 3 cut(s) 493, 950, 1469
EcoRV GATATC 1 cut(s) 918
EcoT14I CCWWGG 1 cut(s) 1464
EcoT38I GRGCYC 2 cut(s) 227, 1285
ErhI CCWWGG 1 cut(s) 1464
FaeI CATG 5 cut(s) 37, 150, 337, 621, 1468
FaqI GGGAC 1 cut(s) 1232
FatI CATG 5 cut(s) 33, 146, 333, 617, 1464
FauNDI CATATG 2 cut(s) 348, 355
Fnu4HI GCNGC 6 cut(s) 24, 462, 773, 842, 1056, 1191
FokI GGATG 8 cut(s) 107, 182, 266, 383, 401, 647, 755, 1452
FriOI GRGCYC 2 cut(s) 227, 1285
Fsp4HI GCNGC 6 cut(s) 24, 462, 773, 842, 1056, 1191
FspBI CTAG 4 cut(s) 429, 807, 1236, 1452
GlaI GCGC 1 cut(s) 476
GluI GCNGC 6 cut(s) 24, 462, 773, 842, 1056, 1191
GsuI CTGGAG 3 cut(s) 516, 766, 1269
HaeII RGCGCY 1 cut(s) 478
HaeIII GGCC 4 cut(s) 145, 360, 1418, 1469
HapII CCGG 3 cut(s) 361, 447, 600
HhaI GCGC 1 cut(s) 477
Hin1II CATG 5 cut(s) 37, 150, 337, 621, 1468
Hin6I GCGC 1 cut(s) 475
HinP1I GCGC 1 cut(s) 475
HincII GTYRAC 6 cut(s) 547, 1063, 1144, 1156, 1200, 1399
HindII GTYRAC 6 cut(s) 547, 1063, 1144, 1156, 1200, 1399
HinfI GANTC 5 cut(s) 5, 746, 796, 955, 1448
HpaI GTTAAC 2 cut(s) 547, 1399
HpaII CCGG 3 cut(s) 361, 447, 600
HphI GGTGA 3 cut(s) 251, 459, 1120
Hpy166II GTNNAC 7 cut(s) 434, 547, 1063, 1144, 1156, 1200, 1399
Hpy188I TCNGA 8 cut(s) 10, 298, 541, 697, 730, 1180, 1219, 1228
Hpy8I GTNNAC 7 cut(s) 434, 547, 1063, 1144, 1156, 1200, 1399
HpyAV CCTTC 5 cut(s) 5, 160, 1028, 1087, 1430
HpyCH4III ACNGT 3 cut(s) 456, 1081, 1123
HpyCH4IV ACGT 1 cut(s) 1202
HpyF10VI GCNNNNNNNGC 4 cut(s) 147, 192, 339, 343
HpyF3I CTNAG 2 cut(s) 338, 972
HpySE526I ACGT 1 cut(s) 1202
Hsp92II CATG 5 cut(s) 37, 150, 337, 621, 1468
HspAI GCGC 1 cut(s) 475
KflI GGGWCCC 1 cut(s) 1246
Kpn2I TCCGGA 1 cut(s) 446
KpnI GGTACC 1 cut(s) 276
KspAI GTTAAC 2 cut(s) 547, 1399
Kzo9I GATC 7 cut(s) 63, 536, 574, 725, 961, 1084, 1443
LmnI GCTCC 6 cut(s) 222, 385, 984, 1096, 1187, 1288
Lsp1109I GCAGC 2 cut(s) 784, 1042
LweI GCATC 4 cut(s) 244, 497, 529, 709
MaeI CTAG 4 cut(s) 429, 807, 1236, 1452
MaeII ACGT 1 cut(s) 1202
MaeIII GTNAC 1 cut(s) 1108
MalI GATC 7 cut(s) 65, 538, 576, 727, 963, 1086, 1445
MboI GATC 7 cut(s) 63, 536, 574, 725, 961, 1084, 1443
MboII GAAGA 8 cut(s) 97, 260, 655, 670, 1318, 1378, 1391, 1445
MflI RGATCY 3 cut(s) 63, 574, 725
MhlI GDGCHC 4 cut(s) 227, 680, 894, 1285
MluCI AATT 6 cut(s) 231, 385, 945, 1048, 1229, 1382
MlyI GAGTC 1 cut(s) 740
MroI TCCGGA 1 cut(s) 446
MseI TTAA 5 cut(s) 546, 987, 1319, 1386, 1398
MslI CAYNNNNRTG 2 cut(s) 531, 671
MspI CCGG 3 cut(s) 361, 447, 600
MspR9I CCNGG 6 cut(s) 362, 495, 600, 601, 952, 1471
MvaI CCWGG 3 cut(s) 495, 952, 1471
MwoI GCNNNNNNNGC 4 cut(s) 147, 192, 339, 343
NciI CCSGG 3 cut(s) 362, 600, 601
NcoI CCATGG 1 cut(s) 1464
NdeI CATATG 2 cut(s) 348, 355
NdeII GATC 7 cut(s) 63, 536, 574, 725, 961, 1084, 1443
NlaIII CATG 5 cut(s) 37, 150, 337, 621, 1468
NmuCI GTSAC 1 cut(s) 1108
NspI RCATGY 1 cut(s) 337
PaeI GCATGC 1 cut(s) 337
PfeI GAWTC 4 cut(s) 5, 796, 955, 1448
PflMI CCANNNNNTGG 1 cut(s) 1470
PfoI TCCNGGA 2 cut(s) 493, 950
PkrI GCNGC 6 cut(s) 25, 463, 774, 843, 1057, 1192
PleI GAGTC 1 cut(s) 740
PpsI GAGTC 1 cut(s) 740
PpuMI RGGWCCY 1 cut(s) 1246
Psp5II RGGWCCY 1 cut(s) 1246
Psp6I CCWGG 3 cut(s) 493, 950, 1469
PspGI CCWGG 3 cut(s) 493, 950, 1469
PspPI GGNCC 1 cut(s) 1246
PspPPI RGGWCCY 1 cut(s) 1246
PsuI RGATCY 3 cut(s) 63, 574, 725
RsaI GTAC 4 cut(s) 158, 274, 1078, 1460
RsaNI GTAC 4 cut(s) 157, 273, 1077, 1459
RseI CAYNNNNRTG 2 cut(s) 531, 671
SaqAI TTAA 5 cut(s) 546, 987, 1319, 1386, 1398
SatI GCNGC 6 cut(s) 24, 462, 773, 842, 1056, 1191
Sau3AI GATC 7 cut(s) 63, 536, 574, 725, 961, 1084, 1443
Sau96I GGNCC 1 cut(s) 1246
ScaI AGTACT 1 cut(s) 1078
SchI GAGTC 1 cut(s) 740
ScrFI CCNGG 6 cut(s) 362, 495, 600, 601, 952, 1471
SduI GDGCHC 4 cut(s) 227, 680, 894, 1285
SfaNI GCATC 4 cut(s) 244, 497, 529, 709
SinI GGWCC 1 cut(s) 1246
SmaI CCCGGG 1 cut(s) 601
SmiMI CAYNNNNRTG 2 cut(s) 531, 671
SpeI ACTAGT 1 cut(s) 428
SphI GCATGC 1 cut(s) 337
Sse9I AATT 6 cut(s) 231, 385, 945, 1048, 1229, 1382
SsiI CCGC 6 cut(s) 23, 92, 462, 705, 841, 1191
SspMI CTAG 4 cut(s) 429, 807, 1236, 1452
StyD4I CCNGG 6 cut(s) 360, 493, 598, 599, 950, 1469
StyI CCWWGG 1 cut(s) 1464
TaaI ACNGT 3 cut(s) 456, 1081, 1123
TaiI ACGT 1 cut(s) 1205
TaqI TCGA 6 cut(s) 482, 794, 874, 960, 1083, 1446
TaqII GACCGA 1 cut(s) 1044
TasI AATT 6 cut(s) 231, 385, 945, 1048, 1229, 1382
TatI WGTACW 1 cut(s) 1076
TauI GCSGC 4 cut(s) 26, 464, 844, 1193
TfiI GAWTC 4 cut(s) 5, 796, 955, 1448
Tru1I TTAA 5 cut(s) 546, 987, 1319, 1386, 1398
Tru9I TTAA 5 cut(s) 546, 987, 1319, 1386, 1398
TscAI CASTG 2 cut(s) 283, 685
TseFI GTSAC 1 cut(s) 1108
TseI GCWGC 2 cut(s) 772, 1055
Tsp45I GTSAC 1 cut(s) 1108
TspDTI ATGAA 6 cut(s) 50, 97, 662, 777, 1379, 1392
TspGWI ACGGA 1 cut(s) 1077
TspMI CCCGGG 1 cut(s) 599
TspRI CASTG 2 cut(s) 283, 685
Van91I CCANNNNNTGG 1 cut(s) 1470
VpaK11BI GGWCC 1 cut(s) 1246
XapI RAATTY 3 cut(s) 1048, 1229, 1382
XbaI TCTAGA 2 cut(s) 806, 1451
XceI RCATGY 1 cut(s) 337
XmaI CCCGGG 1 cut(s) 599
XspI CTAG 4 cut(s) 429, 807, 1236, 1452
ZrmI AGTACT 1 cut(s) 1078
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.