Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0007572

Physical Location & Seq

Genomic Coordinates Reverse (-)

3334402 .. 3344256

Gene Structure 9855 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG019000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2334 bp

ATGGAGTCGGAAGGAGAAACTGAGGCAAAGCCGATGAAGAACTTGGGTGGTCAGGTCTGCCAGATCTGTGGGGATAATGTTGGGAAGACAGCTGCTGGTGAACCATTCATTGCCTGCGACGTCTGTTCTTTTCCTGTTTGCAGGCCATGCTATGAGTATGAGAGGAAGGATGGAAATCAGTCTTGCCCTCAATGCAAAACCAGATACAAGAGGCACAAAGGAAGTCCTGCAATTCTTGGTGATAGAGAAGAGGATGCTGATGCTGATGACGGTGCTAGTGATTTCAACTATACTTCAGAAAATCAAAACGAGAAACAAAAGATTGCCGAGCGCATGTTGAGCTGGCATATGACATATGGGCGAGGAGAGGATATGGGGGGTCCAAACTATGATAAAGAGGTTTCTCACAATCACATCCCTCTGCTCACTAATGGAACAGAGGTTTCCGGAGAACTGTCTGCTGCCTCACCAGGGCGCCTTTCCATGGCATCTCCTGGAGCTTCTATTGGTGGAAAGCGTGTCCATCCTCTTCCTTATGCATCGGATGTTAATCAATCACCTAATTTAAGGGTTGTGGATCCTGTGAGAGAGTTTGGTTCTCCGGGGATAGGTAATGTAGCATGGAAAGAGAGAGTGGATGGCTGGAAGATGAAGCAGGAGAAGAATACTATTCCAATGAGCACTGGTCAAGCTACTTCAGAAAGAGGGGGTGGAGATATTGATGCCAGCACTGATGTGATTGTGGATGACTCTTTGTTGAATGATGAAGCGAGGCAACCTCTCTCTAGAAAGGTCTCTATTCCATCGTCTAGGATAAATCCTTACAGGATGGTCATTGTACTGCGGCTGGTTATTCTCTGTATTTTCTTGCACTATCGGTTAACAAATCCTGTGCGCAATGCCTACGCTCTGTGGTTGATATCAGTCATTTGTGAGATTTGGTTCGCAATATCTTGGATTCTCGATCAGTTCCCTAAGTGGCTGCCTGTAAATCGTGAAACATATCTCGACAGACTTTCTCTGAGATATGACCGAGAAGGAGAACCATCACAGTTAGCTGCTGTTGACATCTTCGTCAGTACTGTGGATCCACTGAAGGAGCCTCCTATGGTGACAGCAAATACTGTGCTATCTATTCTTGCAGTTGACTATCCAGTTGACAAGGTTTCTTGCTATGTTTCTGATGATGGAGCTGCAATGTTGACATTTGAAGCTCTCTCTGAAACTTCAGAATTTGCAAGGAAATGGGTCCCTTTCTGCAAGAAGTATGCCATAGAGCCTAGGGCTCCTGAATGGTACTTTTCACAGAAAATTGATTATTTGAAGGATAAAGTTCAACCATCATTTGTCAAAGACCGCAGAGCAATGAAGAGAGAATACGAAGAATTTAAAGTTCGTGTGAATGGGCTTGTTGCAAAGGCGACAAAAGTACCTGAAGAAGGATGGATCATGCAAGACGGTACTCCATGGCCTGGAAATAATACTAGAGACCATCCAGGAATGATCCAGGTTTTCTTGGGGCAAAGTGGAGGGCTTGATGCTGAGGGTAATGAGCTGCCACGTTTAGTGTATGTTTCTCGTGAAAAGCGTCCGGGTTTCCAACATCACAAGAAGGCTGGTGCTATGAATGCACTTGTTCGAGTATCTGCAGTCCTCACGAATGGACCTTTCTTGTTGAATCTTGATTGTGATCACTACATTAACAATAGTAAGGCCTTGAGGGAAGCAATGTGCTTCCTAATGGATCCTAACCTTGGAAAAAACGTGTGCTATGTTCAGTTTCCACAGAGATTTGATGGCATTGATAGAAATGATCGTTATGCCAATCGAAATACTGTTTTCTTTGATATTAACTTGAGAGGTTTAGATGGTATCCAAGGCCCAGTTTATGTGGGTACCGGATGTGTTTTCAATAGAACAGCCTTGTATGGTTATGAACCTCCTCTCAAGGTTAAGAATAAGAAAGCTGGAGTTCTTTCTTCACTTTGTGGTGGATCACGAAAGAAGGGTTCACAATCCAGTAAAAAAGGCTCAGACAAGAAGAAATCAAGTAAGCATGTGGATCCTACTGTGCCGATTTTCAGTCTAGAGGATATTGAAGAGGGGGTTGAAGGTACTGGATTTGATGATGAGAAGTCATTATTGATGTCACAAATGAGCCTGGAGAAAAGATTTGGTCAGTCTGCTGTTTTTGTTGCGTCGACACTTATGGAGAATGGTGGTGTTCCTCAATCTGCGACACCCGAAACTCTTCTTAAAGAAGCTATTCATGTTATTAGCTGTGGGTATGAAGACAAAAGTGACTGGGGACAAGAGGTAAGTTGTACTTCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005886 GO:0005911 GO:0005975 GO:0005976 GO:0006073 GO:0006950 GO:0006952 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009506 GO:0009832 GO:0009833 GO:0009834 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030054 GO:0030243 GO:0030244 GO:0031410 GO:0031982 GO:0031984 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046527 GO:0050896 GO:0051273 GO:0051274 GO:0051301 GO:0055044 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:0097708 GO:0098791 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt zf-UDP

Protein Analysis

777

Amino Acids

86.39

Weight (kDa)

6.06

Isoelectric Point (pI)

42.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-UDP	PF14569	10 - 86	2.2e-40	Zinc-binding RING-finger
Cellulose_synt	PF03552	355 - 774	2.5e-228	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007572)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05170
fragaria_vesca	FvH4_7g01100 FvH4_7g01100 FvH4_7g01100 FvH4_7g01100 FvH4_7g01100
malus_domestica	MD02G1311600.v1.1 MD07G1011100.v1.1
prunus_persica	Prupe.2G011200_v2.0.a1 Prupe.2G014300_v2.0.a1 Prupe.2G014300_v2.0.a1
pyrus_communis	pycom02g26140 pycom02g26150 pycom07g00920
rosa_chinensis	RchiOBHm_Chr1g0316091
rosa_laevigata	RLG00000030696
rosa_multiflora	Rmu_sc0002531.1_g000033
rosa_roxburghii	Rroxscaffold_4G00331140
rosa_rugosa	Rorug01G0008900
rosa_samantha	Rh1AG019000 Rh1BG013900 Rh1CG016600 Rh1DG013600
rosa_wichuraiana	Rw1G001230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1073
AatII	GACGTC	1 cut(s)	123
Acc16I	TGCGCA	1 cut(s)	896
Acc65I	GGTACC	1 cut(s)	1895
AccB1I	GGYRCC	2 cut(s)	474, 1895
AccB7I	CCANNNNNTGG	1 cut(s)	1472
AccI	GTMKAC	1 cut(s)	2201
AccIII	TCCGGA	1 cut(s)	446
AciI	CCGC	2 cut(s)	844, 1357
AcsI	RAATTY	2 cut(s)	1232, 1385
AcuI	CTGAAG	5 cut(s)	279, 681, 1115, 1212, 1455
AcyI	GRCGYC	2 cut(s)	120, 475
AdeI	CACNNNGTG	1 cut(s)	1988
AfaI	GTAC	8 cut(s)	840, 1081, 1298, 1431, 1462, 1897, 2116, 2326
AfiI	CCNNNNNNNGG	6 cut(s)	471, 484, 608, 1439, 1472, 1754
AflIII	ACRYGT	1 cut(s)	1764
AgsI	TTSAA	9 cut(s)	286, 760, 1211, 1324, 1337, 1678, 1912, 2099, 2111
AjnI	CCWGG	6 cut(s)	469, 493, 1471, 1495, 1506, 2160
AleI	CACNNNNGTG	1 cut(s)	734
Alw21I	GWGCWC	1 cut(s)	683
Alw26I	GTCTC	2 cut(s)	799, 1482
AlwNI	CAGNNNCTG	1 cut(s)	95
Aor13HI	TCCGGA	1 cut(s)	446
AoxI	GGCC	4 cut(s)	143, 1469, 1713, 1879
ApeKI	GCWGC	6 cut(s)	92, 461, 982, 1058, 1193, 1555
ApoI	RAATTY	2 cut(s)	1232, 1385
Asp700I	GAANNNNTTC	2 cut(s)	2250, 2265
Asp718I	GGTACC	1 cut(s)	1895
AspA2I	CCTAGG	1 cut(s)	1280
AspLEI	GCGC	3 cut(s)	333, 477, 897
AspS9I	GGNCC	4 cut(s)	380, 1249, 1664, 1880
AsuC2I	CCSGG	2 cut(s)	603, 1593
AsuHPI	GGTGA	5 cut(s)	110, 251, 459, 549, 1123
AvaII	GGWCC	3 cut(s)	380, 1249, 1664
AvrII	CCTAGG	1 cut(s)	1280
BaeI	ACNNNNGTAYC	2 cut(s)	1413, 1446
BamHI	GGATCC	4 cut(s)	577, 1087, 1744, 2062
BanI	GGYRCC	2 cut(s)	474, 1895
BanII	GRGCYC	1 cut(s)	1288
BarI	GAAGNNNNNNTAC	2 cut(s)	1361, 1393
BauI	CACGAG	1 cut(s)	1578
BbsI	GAAGAC	2 cut(s)	92, 2298
Bbv12I	GWGCWC	1 cut(s)	683
BbvCI	CCTCAGC	1 cut(s)	1542
BbvI	GCAGC	6 cut(s)	79, 448, 969, 1045, 1180, 1542
BciT130I	CCWGG	6 cut(s)	471, 495, 1473, 1497, 1508, 2162
BciVI	GTATCC	1 cut(s)	1883
BclI	TGATCA	1 cut(s)	1690
BcnI	CCSGG	2 cut(s)	603, 1593
BcoDI	GTCTC	2 cut(s)	799, 1482
BfaI	CTAG	6 cut(s)	276, 786, 810, 1281, 1485, 2087
BfmI	CTRYAG	1 cut(s)	1647
BfoI	RGCGCY	1 cut(s)	478
BfuI	GTATCC	1 cut(s)	1883
BglII	AGATCT	1 cut(s)	63
BisI	GCNGC	7 cut(s)	93, 462, 845, 983, 1059, 1194, 1556
BlnI	CCTAGG	1 cut(s)	1280
BlsI	GCNGC	7 cut(s)	94, 463, 846, 984, 1060, 1195, 1557
BmcAI	AGTACT	1 cut(s)	1081
Bme1390I	CCNGG	8 cut(s)	471, 495, 603, 1473, 1497, 1508, 1593, 2162
Bme18I	GGWCC	3 cut(s)	380, 1249, 1664
BmgT120I	GGNCC	4 cut(s)	380, 1249, 1664, 1880
BmrFI	CCNGG	8 cut(s)	471, 495, 603, 1473, 1497, 1508, 1593, 2162
BmrI	ACTGGG	2 cut(s)	1877, 2314
BmsI	GCATC	6 cut(s)	244, 250, 497, 548, 712, 1528
BmuI	ACTGGG	2 cut(s)	1877, 2314
BpiI	GAAGAC	2 cut(s)	92, 2298
BplI	GAGNNNNNCTC	2 cut(s)	763, 795
BpmI	CTGGAG	3 cut(s)	516, 1989, 2183
Bpu10I	CCTNAGC	1 cut(s)	1542
BpuEI	CTTGAG	3 cut(s)	1738, 1876, 1931
BpuMI	CCSGG	2 cut(s)	603, 1593
BsaBI	GATNNNNATC	3 cut(s)	174, 549, 1689
BsaHI	GRCGYC	2 cut(s)	120, 475
BsaI	GGTCTC	2 cut(s)	799, 1482
BsaJI	CCNNGG	7 cut(s)	470, 483, 602, 1280, 1466, 1753, 1876
BsaWI	WCCGGW	2 cut(s)	446, 1898
Bsc4I	CCNNNNNNNGG	6 cut(s)	471, 484, 608, 1439, 1472, 1754
Bse1I	ACTGG	6 cut(s)	688, 1154, 1883, 2019, 2122, 2309
Bse3DI	GCAATG	5 cut(s)	108, 904, 1203, 1371, 1734
Bse8I	GATNNNNATC	3 cut(s)	174, 549, 1689
BseAI	TCCGGA	1 cut(s)	446
BseBI	CCWGG	6 cut(s)	471, 495, 1473, 1497, 1508, 2162
BseDI	CCNNGG	7 cut(s)	470, 483, 602, 1280, 1466, 1753, 1876
BseJI	GATNNNNATC	3 cut(s)	174, 549, 1689
BseLI	CCNNNNNNNGG	6 cut(s)	471, 484, 608, 1439, 1472, 1754
BseMI	GCAATG	5 cut(s)	108, 904, 1203, 1371, 1734
BseMII	CTCAG	4 cut(s)	12, 1013, 1533, 2046
BseNI	ACTGG	6 cut(s)	688, 1154, 1883, 2019, 2122, 2309
BseRI	GAGGAG	2 cut(s)	378, 1932
BseXI	GCAGC	6 cut(s)	79, 448, 969, 1045, 1180, 1542
BshFI	GGCC	4 cut(s)	145, 1471, 1715, 1881
BshNI	GGYRCC	2 cut(s)	474, 1895
BsiHKAI	GWGCWC	1 cut(s)	683
BsiSI	CCGG	4 cut(s)	447, 602, 1592, 1899
BslFI	GGGAC	2 cut(s)	1235, 2322
BslI	CCNNNNNNNGG	6 cut(s)	471, 484, 608, 1439, 1472, 1754
BsmAI	GTCTC	2 cut(s)	799, 1482
BsmFI	GGGAC	2 cut(s)	1235, 2322
BsmI	GAATGC	1 cut(s)	1633
BsnI	GGCC	4 cut(s)	145, 1471, 1715, 1881
Bso31I	GGTCTC	2 cut(s)	799, 1482
Bsp1286I	GDGCHC	2 cut(s)	683, 1288
Bsp13I	TCCGGA	1 cut(s)	446
Bsp19I	CCATGG	2 cut(s)	483, 1466
BspACI	CCGC	2 cut(s)	844, 1357
BspANI	GGCC	4 cut(s)	145, 1471, 1715, 1881
BspCNI	CTCAG	4 cut(s)	13, 1014, 1534, 2045
BspEI	TCCGGA	1 cut(s)	446
BspMAI	CTGCAG	1 cut(s)	1651
BspT107I	GGYRCC	2 cut(s)	474, 1895
BspTNI	GGTCTC	2 cut(s)	799, 1482
BsrDI	GCAATG	5 cut(s)	108, 904, 1203, 1371, 1734
BsrI	ACTGG	6 cut(s)	688, 1154, 1883, 2019, 2122, 2309
BssECI	CCNNGG	7 cut(s)	470, 483, 602, 1280, 1466, 1753, 1876
BssNI	GRCGYC	2 cut(s)	120, 475
BssSI	CACGAG	1 cut(s)	1578
BssT1I	CCWWGG	5 cut(s)	483, 1280, 1466, 1753, 1876
Bst2BI	CACGAG	1 cut(s)	1578
Bst2UI	CCWGG	6 cut(s)	471, 495, 1473, 1497, 1508, 2162
Bst4CI	ACNGT	8 cut(s)	272, 456, 1053, 1084, 1126, 1460, 1837, 2071
Bst6I	CTCTTC	5 cut(s)	243, 534, 1364, 2094, 2256
BstACI	GRCGYC	2 cut(s)	120, 475
BstAPI	GCANNNNNTGC	1 cut(s)	147
BstC8I	GCNNGC	4 cut(s)	115, 143, 344, 727
BstDEI	CTNAG	5 cut(s)	21, 975, 1022, 1542, 2032
BstDSI	CCRYGG	2 cut(s)	483, 1466
BstENI	CCTNNNNNAGG	1 cut(s)	1437
BstH2I	RGCGCY	1 cut(s)	478
BstHHI	GCGC	3 cut(s)	333, 477, 897
BstMAI	GTCTC	2 cut(s)	799, 1482
BstMWI	GCNNNNNNNGC	4 cut(s)	147, 192, 339, 1628
BstNI	CCWGG	6 cut(s)	471, 495, 1473, 1497, 1508, 2162
BstNSI	RCATGY	2 cut(s)	337, 2060
BstSCI	CCNGG	8 cut(s)	469, 493, 601, 1471, 1495, 1506, 1591, 2160
BstSFI	CTRYAG	1 cut(s)	1647
BstV1I	GCAGC	6 cut(s)	79, 448, 969, 1045, 1180, 1542
BstV2I	GAAGAC	2 cut(s)	92, 2298
BstX2I	RGATCY	5 cut(s)	63, 577, 1087, 1744, 2062
BstXI	CCANNNNNNTGG	1 cut(s)	68
BstYI	RGATCY	5 cut(s)	63, 577, 1087, 1744, 2062
BsuI	GTATCC	1 cut(s)	1883
BsuRI	GGCC	4 cut(s)	145, 1471, 1715, 1881
BtgI	CCRYGG	2 cut(s)	483, 1466
BtsIMutI	CAGTG	3 cut(s)	681, 729, 1091
Cac8I	GCNNGC	4 cut(s)	115, 143, 344, 727
CaiI	CAGNNNCTG	1 cut(s)	95
CfoI	GCGC	3 cut(s)	333, 477, 897
Cfr13I	GGNCC	4 cut(s)	380, 1249, 1664, 1880
CseI	GACGC	2 cut(s)	1577, 2187
Csp6I	GTAC	8 cut(s)	839, 1080, 1297, 1430, 1461, 1896, 2115, 2325
CviAII	CATG	8 cut(s)	147, 334, 484, 621, 1450, 1467, 2057, 2270
CviQI	GTAC	8 cut(s)	839, 1080, 1297, 1430, 1461, 1896, 2115, 2325
DdeI	CTNAG	5 cut(s)	21, 975, 1022, 1542, 2032
DinI	GGCGCC	1 cut(s)	476
DraI	TTTAAA	1 cut(s)	1390
DraIII	CACNNNGTG	1 cut(s)	1988
DrdI	GACNNNNNNGTC	1 cut(s)	1073
DseDI	GACNNNNNNGTC	1 cut(s)	1073
Eam1104I	CTCTTC	5 cut(s)	243, 534, 1364, 2094, 2256
EarI	CTCTTC	5 cut(s)	243, 534, 1364, 2094, 2256
Eco130I	CCWWGG	5 cut(s)	483, 1280, 1466, 1753, 1876
Eco147I	AGGCCT	1 cut(s)	1715
Eco24I	GRGCYC	1 cut(s)	1288
Eco31I	GGTCTC	2 cut(s)	799, 1482
Eco32I	GATATC	1 cut(s)	921
Eco47I	GGWCC	3 cut(s)	380, 1249, 1664
Eco57I	CTGAAG	5 cut(s)	279, 681, 1115, 1212, 1455
EcoNI	CCTNNNNNAGG	1 cut(s)	1437
EcoO109I	RGGNCCY	1 cut(s)	1249
EcoRII	CCWGG	6 cut(s)	469, 493, 1471, 1495, 1506, 2160
EcoRV	GATATC	1 cut(s)	921
EcoT14I	CCWWGG	5 cut(s)	483, 1280, 1466, 1753, 1876
EcoT22I	ATGCAT	1 cut(s)	541
EcoT38I	GRGCYC	1 cut(s)	1288
EgeI	GGCGCC	1 cut(s)	476
EheI	GGCGCC	1 cut(s)	476
ErhI	CCWWGG	5 cut(s)	483, 1280, 1466, 1753, 1876
FaeI	CATG	8 cut(s)	150, 337, 487, 624, 1453, 1470, 2060, 2273
FalI	AAGNNNNNCTT	1 cut(s)	2311
FaqI	GGGAC	2 cut(s)	1235, 2322
FatI	CATG	8 cut(s)	146, 333, 483, 620, 1449, 1466, 2056, 2269
FauNDI	CATATG	2 cut(s)	348, 355
FbaI	TGATCA	1 cut(s)	1690
FblI	GTMKAC	1 cut(s)	2201
Fnu4HI	GCNGC	7 cut(s)	93, 462, 845, 983, 1059, 1194, 1556
FriOI	GRGCYC	1 cut(s)	1288
Fsp4HI	GCNGC	7 cut(s)	93, 462, 845, 983, 1059, 1194, 1556
FspBI	CTAG	6 cut(s)	276, 786, 810, 1281, 1485, 2087
FspI	TGCGCA	1 cut(s)	896
GlaI	GCGC	3 cut(s)	332, 476, 896
GluI	GCNGC	7 cut(s)	93, 462, 845, 983, 1059, 1194, 1556
GsuI	CTGGAG	3 cut(s)	516, 1989, 2183
HaeII	RGCGCY	1 cut(s)	478
HaeIII	GGCC	4 cut(s)	145, 1471, 1715, 1881
HapII	CCGG	4 cut(s)	447, 602, 1592, 1899
HgaI	GACGC	2 cut(s)	1577, 2187
HhaI	GCGC	3 cut(s)	333, 477, 897
Hin1I	GRCGYC	2 cut(s)	120, 475
Hin1II	CATG	8 cut(s)	150, 337, 487, 624, 1453, 1470, 2060, 2273
Hin6I	GCGC	3 cut(s)	331, 475, 895
HinP1I	GCGC	3 cut(s)	331, 475, 895
HincII	GTYRAC	6 cut(s)	882, 1066, 1147, 1159, 1203, 2202
HindII	GTYRAC	6 cut(s)	882, 1066, 1147, 1159, 1203, 2202
HinfI	GANTC	4 cut(s)	5, 749, 958, 1678
HpaI	GTTAAC	1 cut(s)	882
HpaII	CCGG	4 cut(s)	447, 602, 1592, 1899
HphI	GGTGA	5 cut(s)	110, 251, 459, 549, 1123
Hpy166II	GTNNAC	8 cut(s)	101, 882, 1066, 1147, 1159, 1203, 2012, 2202
Hpy188I	TCNGA	9 cut(s)	10, 298, 544, 700, 1023, 1183, 1222, 1231, 2035
Hpy8I	GTNNAC	8 cut(s)	101, 882, 1066, 1147, 1159, 1203, 2012, 2202
Hpy99I	CGWCG	2 cut(s)	122, 2203
HpyAV	CCTTC	9 cut(s)	5, 160, 1031, 1090, 1318, 1433, 1606, 1999, 2105
HpyCH4III	ACNGT	8 cut(s)	272, 456, 1053, 1084, 1126, 1460, 1837, 2071
HpyCH4IV	ACGT	3 cut(s)	120, 1561, 1764
HpyF10VI	GCNNNNNNNGC	4 cut(s)	147, 192, 339, 1628
HpyF3I	CTNAG	5 cut(s)	21, 975, 1022, 1542, 2032
HpySE526I	ACGT	3 cut(s)	120, 1561, 1764
Hsp92I	GRCGYC	2 cut(s)	120, 475
Hsp92II	CATG	8 cut(s)	150, 337, 487, 624, 1453, 1470, 2060, 2273
HspAI	GCGC	3 cut(s)	331, 475, 895
KasI	GGCGCC	1 cut(s)	474
KflI	GGGWCCC	1 cut(s)	1249
Kpn2I	TCCGGA	1 cut(s)	446
KpnI	GGTACC	1 cut(s)	1899
Ksp22I	TGATCA	1 cut(s)	1690
KspAI	GTTAAC	1 cut(s)	882
LmnI	GCTCC	4 cut(s)	497, 1099, 1190, 1291
Lsp1109I	GCAGC	6 cut(s)	79, 448, 969, 1045, 1180, 1542
LweI	GCATC	6 cut(s)	244, 250, 497, 548, 712, 1528
MaeI	CTAG	6 cut(s)	276, 786, 810, 1281, 1485, 2087
MaeII	ACGT	3 cut(s)	120, 1561, 1764
MaeIII	GTNAC	3 cut(s)	1111, 2148, 2300
MflI	RGATCY	5 cut(s)	63, 577, 1087, 1744, 2062
MhlI	GDGCHC	2 cut(s)	683, 1288
MluCI	AATT	5 cut(s)	231, 562, 1232, 1311, 1385
Mly113I	GGCGCC	1 cut(s)	475
MlyI	GAGTC	2 cut(s)	14, 743
MmeI	TCCRAC	1 cut(s)	1624
Mph1103I	ATGCAT	1 cut(s)	541
MroI	TCCGGA	1 cut(s)	446
MroXI	GAANNNNTTC	2 cut(s)	2250, 2265
MseI	TTAA	8 cut(s)	549, 566, 881, 1389, 1701, 1851, 1953, 2256
MslI	CAYNNNNRTG	1 cut(s)	734
MspA1I	CMGCKG	1 cut(s)	92
MspI	CCGG	4 cut(s)	447, 602, 1592, 1899
MspR9I	CCNGG	8 cut(s)	471, 495, 603, 1473, 1497, 1508, 1593, 2162
Mva1269I	GAATGC	1 cut(s)	1633
MvaI	CCWGG	6 cut(s)	471, 495, 1473, 1497, 1508, 2162
MwoI	GCNNNNNNNGC	4 cut(s)	147, 192, 339, 1628
NarI	GGCGCC	1 cut(s)	475
NciI	CCSGG	2 cut(s)	603, 1593
NcoI	CCATGG	2 cut(s)	483, 1466
NdeI	CATATG	2 cut(s)	348, 355
NlaIII	CATG	8 cut(s)	150, 337, 487, 624, 1453, 1470, 2060, 2273
NmeAIII	GCCGAG	1 cut(s)	352
NmuCI	GTSAC	3 cut(s)	1111, 2148, 2300
NsbI	TGCGCA	1 cut(s)	896
NsiI	ATGCAT	1 cut(s)	541
NspI	RCATGY	2 cut(s)	337, 2060
OliI	CACNNNNGTG	1 cut(s)	734
PceI	AGGCCT	1 cut(s)	1715
PcsI	WCGNNNNNNNCGW	1 cut(s)	1585
PctI	GAATGC	1 cut(s)	1633
PdmI	GAANNNNTTC	2 cut(s)	2250, 2265
PfeI	GAWTC	2 cut(s)	958, 1678
PflMI	CCANNNNNTGG	1 cut(s)	1472
PfoI	TCCNGGA	2 cut(s)	493, 1495
PkrI	GCNGC	7 cut(s)	94, 463, 846, 984, 1060, 1195, 1557
PleI	GAGTC	2 cut(s)	13, 743
PluTI	GGCGCC	1 cut(s)	478
PpsI	GAGTC	2 cut(s)	13, 743
PpuMI	RGGWCCY	1 cut(s)	1249
Psp5II	RGGWCCY	1 cut(s)	1249
Psp6I	CCWGG	6 cut(s)	469, 493, 1471, 1495, 1506, 2160
PspGI	CCWGG	6 cut(s)	469, 493, 1471, 1495, 1506, 2160
PspPI	GGNCC	4 cut(s)	380, 1249, 1664, 1880
PspPPI	RGGWCCY	1 cut(s)	1249
PstI	CTGCAG	1 cut(s)	1651
PstNI	CAGNNNCTG	1 cut(s)	95
PsuI	RGATCY	5 cut(s)	63, 577, 1087, 1744, 2062
PvuII	CAGCTG	1 cut(s)	92
RsaI	GTAC	8 cut(s)	840, 1081, 1298, 1431, 1462, 1897, 2116, 2326
RsaNI	GTAC	8 cut(s)	839, 1080, 1297, 1430, 1461, 1896, 2115, 2325
RseI	CAYNNNNRTG	1 cut(s)	734
SalI	GTCGAC	1 cut(s)	2200
SaqAI	TTAA	8 cut(s)	549, 566, 881, 1389, 1701, 1851, 1953, 2256
SatI	GCNGC	7 cut(s)	93, 462, 845, 983, 1059, 1194, 1556
Sau96I	GGNCC	4 cut(s)	380, 1249, 1664, 1880
ScaI	AGTACT	1 cut(s)	1081
SchI	GAGTC	2 cut(s)	14, 743
ScrFI	CCNGG	8 cut(s)	471, 495, 603, 1473, 1497, 1508, 1593, 2162
SduI	GDGCHC	2 cut(s)	683, 1288
SfaNI	GCATC	6 cut(s)	244, 250, 497, 548, 712, 1528
SfcI	CTRYAG	1 cut(s)	1647
SfoI	GGCGCC	1 cut(s)	476
SinI	GGWCC	3 cut(s)	380, 1249, 1664
SmiMI	CAYNNNNRTG	1 cut(s)	734
SmlI	CTYRAG	3 cut(s)	1717, 1855, 1946
SmoI	CTYRAG	3 cut(s)	1717, 1855, 1946
Sse9I	AATT	5 cut(s)	231, 562, 1232, 1311, 1385
SseBI	AGGCCT	1 cut(s)	1715
SsiI	CCGC	2 cut(s)	844, 1357
SspDI	GGCGCC	1 cut(s)	474
SspMI	CTAG	6 cut(s)	276, 786, 810, 1281, 1485, 2087
StuI	AGGCCT	1 cut(s)	1715
StyD4I	CCNGG	8 cut(s)	469, 493, 601, 1471, 1495, 1506, 1591, 2160
StyI	CCWWGG	5 cut(s)	483, 1280, 1466, 1753, 1876
TaaI	ACNGT	8 cut(s)	272, 456, 1053, 1084, 1126, 1460, 1837, 2071
TaiI	ACGT	3 cut(s)	123, 1564, 1767
TaqI	TCGA	5 cut(s)	963, 1008, 1639, 1828, 2201
TaqII	GACCGA	1 cut(s)	1047
TasI	AATT	5 cut(s)	231, 562, 1232, 1311, 1385
TatI	WGTACW	3 cut(s)	838, 1079, 2324
TauI	GCSGC	1 cut(s)	847
TfiI	GAWTC	2 cut(s)	958, 1678
Tru1I	TTAA	8 cut(s)	549, 566, 881, 1389, 1701, 1851, 1953, 2256
Tru9I	TTAA	8 cut(s)	549, 566, 881, 1389, 1701, 1851, 1953, 2256
TscAI	CASTG	3 cut(s)	688, 736, 1098
TseFI	GTSAC	3 cut(s)	1111, 2148, 2300
TseI	GCWGC	6 cut(s)	92, 461, 982, 1058, 1193, 1555
Tsp45I	GTSAC	3 cut(s)	1111, 2148, 2300
TspDTI	ATGAA	9 cut(s)	50, 97, 665, 780, 1382, 1640, 1950, 2258, 2304
TspRI	CASTG	3 cut(s)	688, 736, 1098
Van91I	CCANNNNNTGG	1 cut(s)	1472
VpaK11BI	GGWCC	3 cut(s)	380, 1249, 1664
XagI	CCTNNNNNAGG	1 cut(s)	1437
XapI	RAATTY	2 cut(s)	1232, 1385
XbaI	TCTAGA	2 cut(s)	785, 2086
XceI	RCATGY	2 cut(s)	337, 2060
XmaJI	CCTAGG	1 cut(s)	1280
XmiI	GTMKAC	1 cut(s)	2201
XmnI	GAANNNNTTC	2 cut(s)	2250, 2265
XspI	CTAG	6 cut(s)	276, 786, 810, 1281, 1485, 2087
ZraI	GACGTC	1 cut(s)	121
ZrmI	AGTACT	1 cut(s)	1081
Zsp2I	ATGCAT	1 cut(s)	541

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.