Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0007572

Physical Location & Seq

Genomic Coordinates Reverse (-)

2174027 .. 2181796

Gene Structure 7770 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG013600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2427 bp

ATGGAGTCCGAAGGAGAAACTGAGGCAAAGCCGATGAAGAACTTGGGTGGTCAGGTCTGCCAGATCTGTGGGGATAATGTTGGGAAGACAGCTGCTGGTGAACCATTCATTGCCTGCGACGTCTGCTCTTTTCCTGTTTGCAGGCCATGCTATGAGTATGAGAGGAAGGATGGAAATCAGTCTTGCCCTCAATGCAAAACCAGATACAAGAGGCACAAAGGAAGTCCTGCAATTCTTGGTGATAGAGAAGAGGATGGTGATGCTGATGATGGTGCTAGTGATTTCAACTATACTTCAGAAAATCAAAACGAGAAACAAAAGATTGCCGAGCGCATGTTGAGCTGGCATATGACATATGGGCGAGGAGAGGATATGGGGGGTCCAAACTATGATAAGGAGGTTTCTCACAATCACATCCCTCTGCTCACTAATGGAACAGAGGTTTCCGGAGAACTGTCTGCTGCCTCACCAGGGCGCCTTTCCATGGCATCTCCTGGAGCTTCTATTGGTGGAAAGCGAGTCCATCCTCTTCCTTATGCATCGGATGTTAATCAATCACGTAATACTCTCCATCTAATGTGTCATCTTTTCTGGTTCTTTATGTATTTCTGCCAATATGCATTCGAGGTTGTTGATTACACTCTTTTTGCAGCTAATTTAAGGGTTGTGGATCCTGTGAGAGAGTTTGGTTCTCCGGGGATAGGTAATGTAGCATGGAAAGAGAGAGTGGATGGATGGAAGATGAAGCAGGAGAAGAATACTATTCCAATGAGCACTGGTCAAGCTACTTCAGAAAGAGGGGGTGGAGATATTGATGCCAGCACTGATGTGATTGTGGATGACTCTTTGTTGAATGATGAAGCAAGGCAACCTCTCTCTAGAAAGGTCTCTATTCCATCGTCTAGGATAAATCCTTACAGGATGGTCATTGTACTGCGGCTGGTTATTCTCTGTATTTTCTTGCACTATCGGTTAACAAATCCTGTGCGCAATGCCTATGCCCTGTGGTTGATATCAGTCATTTGTGAGATTTGGTTCGCAATATCTTGGATTCTCGATCAGTTCCCTAAGTGGCTGCCTGTAAATCGTGAAACATATCTCGACAGACTTTCTCTGAGATATGACCGAGAAGGAGAACCATCACAGTTAGCTGCTGTTGACATCTTCGTCAGTACTGTGGATCCACTGAAGGAGCCTCCTATGGTGACAGCAAATACTGTGCTATCTATTCTTGCAGTTGACTATCCAGTTGACAAGGTTTCTTGCTATGTTTCTGATGATGGAGCTGCAATGTTGACATTTGAAGCTCTCTCTGAAACTTCAGAATTTGCAAGGAAATGGGTCCCTTTCTGCAAGAAGTATGCCATAGAGCCTAGGGCTCCTGAATGGTACTTTTCACAGAAAATTGATTATTTGAAGGATAAAGTTCAACCATCATTTGTCAAAGACCGCAGAGCAATGAAGAGAGAATACGAAGAATTTAAAGTTCGTGTGAATGGGCTTGTTGCAAAGGCGACAAAAGTACCTGAAGAAGGATGGATCATGCAAGACGGTACTCCATGGCCTGGAAATAATACTAGAGACCATCCAGGAATGATCCAGGTTTTCTTGGGGCAAAGTGGAGGGCTTGATGCAGAGGGCAATGAACTGCCACGTTTAGTGTATGTTTCTCGTGAAAAGCGTCCGGGTTTCCAACATCACAAGAAGGCTGGTGCTATGAATGCACTTGTTCGAGTATCTGCAGTCCTCACGAATGGACCTTTCTTGTTGAATCTTGATTGTGATCACTACATTAACAATAGTAAGGCCTTGAGGGAAGCAATGTGCTTCCTAATGGATCCTAACCTTGGAAAAAACGTGTGCTATGTTCAGTTTCCACAGAGATTTGATGGCATTGATAGAAATGATCGTTATGCCAATCGAAATACTGTTTTCTTTGATATTAACTTGAGAGGTTTAGATGGTATCCAAGGCCCAGTTTATGTGGGTACCGGATGTGTTTTCAATAGAACAGCCTTGTATGGTTATGAACCTCCTCTCAAGGTTAAGAATAAGAAAGCTGGAGTTCTTTCTTCACTTTGTGGTGGATCACGAAAGAAGGGTTCACAATCCAGTAAAAAAGGCTCAGACAAGAAGAAATCAAGTAAGCATGTGGATCCTACCGTGCCGATTTTCAGTCTAGAGGATATTGAAGAGGGGGTTGAAGGTACTGGATTTGATGATGAGAAGTCATTATTGATGTCACAAATGAGCCTGGAGAAAAGATTTGGTCAGTCTGCTGTTTTTGTTGCTTCGACACTTATGGAGAATGGTGGTGTTCCTCAATCTGCGACACCTGAAACTCTTCTTAAAGAAGCTATTCATGTTATTAGCTGTGGGTATGAAGACAAAAGTGACTGGGGACAAGAGGTAAGTTGTACTTCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005886 GO:0005911 GO:0005975 GO:0005976 GO:0006073 GO:0006950 GO:0006952 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009506 GO:0009832 GO:0009833 GO:0009834 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030054 GO:0030243 GO:0030244 GO:0031410 GO:0031982 GO:0031984 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046527 GO:0050896 GO:0051273 GO:0051274 GO:0051301 GO:0055044 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:0097708 GO:0098791 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt zf-UDP

Protein Analysis

808

Amino Acids

90.29

Weight (kDa)

6.06

Isoelectric Point (pI)

41.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-UDP	PF14569	10 - 86	2e-40	Zinc-binding RING-finger
Cellulose_synt	PF03552	386 - 805	2.7e-228	Cellulose synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007572)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05170
fragaria_vesca	FvH4_7g01100 FvH4_7g01100 FvH4_7g01100 FvH4_7g01100 FvH4_7g01100
malus_domestica	MD02G1311600.v1.1 MD07G1011100.v1.1
prunus_persica	Prupe.2G011200_v2.0.a1 Prupe.2G014300_v2.0.a1 Prupe.2G014300_v2.0.a1
pyrus_communis	pycom02g26140 pycom02g26150 pycom07g00920
rosa_chinensis	RchiOBHm_Chr1g0316091
rosa_laevigata	RLG00000030696
rosa_multiflora	Rmu_sc0002531.1_g000033
rosa_roxburghii	Rroxscaffold_4G00331140
rosa_rugosa	Rorug01G0008900
rosa_samantha	Rh1AG019000 Rh1BG013900 Rh1CG016600 Rh1DG013600
rosa_wichuraiana	Rw1G001230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1166
AatII	GACGTC	1 cut(s)	123
Acc16I	TGCGCA	1 cut(s)	989
Acc65I	GGTACC	1 cut(s)	1988
AccB1I	GGYRCC	2 cut(s)	474, 1988
AccB7I	CCANNNNNTGG	1 cut(s)	1565
AccIII	TCCGGA	1 cut(s)	446
AciI	CCGC	2 cut(s)	937, 1450
AcsI	RAATTY	2 cut(s)	1325, 1478
AcuI	CTGAAG	5 cut(s)	279, 774, 1208, 1305, 1548
AcyI	GRCGYC	2 cut(s)	120, 475
AdeI	CACNNNGTG	1 cut(s)	2081
AfaI	GTAC	8 cut(s)	933, 1174, 1391, 1524, 1555, 1990, 2209, 2419
AfiI	CCNNNNNNNGG	6 cut(s)	471, 484, 701, 1532, 1565, 1847
AflIII	ACRYGT	1 cut(s)	1857
AgsI	TTSAA	9 cut(s)	286, 853, 1304, 1417, 1430, 1771, 2005, 2192, 2204
AjnI	CCWGG	6 cut(s)	469, 493, 1564, 1588, 1599, 2253
AleI	CACNNNNGTG	1 cut(s)	827
Alw21I	GWGCWC	1 cut(s)	776
Alw26I	GTCTC	2 cut(s)	892, 1575
AlwNI	CAGNNNCTG	1 cut(s)	95
Aor13HI	TCCGGA	1 cut(s)	446
AoxI	GGCC	4 cut(s)	143, 1562, 1806, 1972
ApeKI	GCWGC	6 cut(s)	92, 461, 650, 1075, 1151, 1286
ApoI	RAATTY	2 cut(s)	1325, 1478
Asp700I	GAANNNNTTC	2 cut(s)	2343, 2358
Asp718I	GGTACC	1 cut(s)	1988
AspA2I	CCTAGG	1 cut(s)	1373
AspLEI	GCGC	3 cut(s)	333, 477, 990
AspS9I	GGNCC	4 cut(s)	380, 1342, 1757, 1973
AsuC2I	CCSGG	2 cut(s)	696, 1686
AsuHPI	GGTGA	5 cut(s)	110, 251, 269, 459, 1216
AvaII	GGWCC	3 cut(s)	380, 1342, 1757
AvrII	CCTAGG	1 cut(s)	1373
BaeI	ACNNNNGTAYC	2 cut(s)	1506, 1539
BamHI	GGATCC	4 cut(s)	670, 1180, 1837, 2155
BanI	GGYRCC	2 cut(s)	474, 1988
BanII	GRGCYC	1 cut(s)	1381
BarI	GAAGNNNNNNTAC	2 cut(s)	1454, 1486
BauI	CACGAG	1 cut(s)	1671
BbsI	GAAGAC	2 cut(s)	92, 2391
Bbv12I	GWGCWC	1 cut(s)	776
BbvI	GCAGC	6 cut(s)	79, 448, 662, 1062, 1138, 1273
BciT130I	CCWGG	6 cut(s)	471, 495, 1566, 1590, 1601, 2255
BciVI	GTATCC	1 cut(s)	1976
BclI	TGATCA	1 cut(s)	1783
BcnI	CCSGG	2 cut(s)	696, 1686
BcoDI	GTCTC	2 cut(s)	892, 1575
BfaI	CTAG	6 cut(s)	276, 879, 903, 1374, 1578, 2180
BfmI	CTRYAG	1 cut(s)	1740
BfoI	RGCGCY	1 cut(s)	478
BfuI	GTATCC	1 cut(s)	1976
BglII	AGATCT	1 cut(s)	63
BisI	GCNGC	7 cut(s)	93, 462, 651, 938, 1076, 1152, 1287
BlnI	CCTAGG	1 cut(s)	1373
BlsI	GCNGC	7 cut(s)	94, 463, 652, 939, 1077, 1153, 1288
BmcAI	AGTACT	1 cut(s)	1174
Bme1390I	CCNGG	8 cut(s)	471, 495, 696, 1566, 1590, 1601, 1686, 2255
Bme18I	GGWCC	3 cut(s)	380, 1342, 1757
BmgT120I	GGNCC	4 cut(s)	380, 1342, 1757, 1973
BmrFI	CCNGG	8 cut(s)	471, 495, 696, 1566, 1590, 1601, 1686, 2255
BmrI	ACTGGG	2 cut(s)	1970, 2407
BmsI	GCATC	5 cut(s)	250, 497, 548, 805, 1621
BmuI	ACTGGG	2 cut(s)	1970, 2407
BpiI	GAAGAC	2 cut(s)	92, 2391
BpmI	CTGGAG	3 cut(s)	516, 2082, 2276
BpuEI	CTTGAG	3 cut(s)	1831, 1969, 2024
BpuMI	CCSGG	2 cut(s)	696, 1686
BsaAI	YACGTR	1 cut(s)	560
BsaBI	GATNNNNATC	3 cut(s)	174, 549, 1782
BsaHI	GRCGYC	2 cut(s)	120, 475
BsaI	GGTCTC	2 cut(s)	892, 1575
BsaJI	CCNNGG	7 cut(s)	470, 483, 695, 1373, 1559, 1846, 1969
BsaWI	WCCGGW	2 cut(s)	446, 1991
Bsc4I	CCNNNNNNNGG	6 cut(s)	471, 484, 701, 1532, 1565, 1847
Bse1I	ACTGG	6 cut(s)	781, 1247, 1976, 2112, 2215, 2402
Bse3DI	GCAATG	6 cut(s)	108, 997, 1296, 1464, 1648, 1827
Bse8I	GATNNNNATC	3 cut(s)	174, 549, 1782
BseAI	TCCGGA	1 cut(s)	446
BseBI	CCWGG	6 cut(s)	471, 495, 1566, 1590, 1601, 2255
BseDI	CCNNGG	7 cut(s)	470, 483, 695, 1373, 1559, 1846, 1969
BseJI	GATNNNNATC	3 cut(s)	174, 549, 1782
BseLI	CCNNNNNNNGG	6 cut(s)	471, 484, 701, 1532, 1565, 1847
BseMI	GCAATG	6 cut(s)	108, 997, 1296, 1464, 1648, 1827
BseMII	CTCAG	3 cut(s)	12, 1106, 2139
BseNI	ACTGG	6 cut(s)	781, 1247, 1976, 2112, 2215, 2402
BseRI	GAGGAG	2 cut(s)	378, 2025
BseXI	GCAGC	6 cut(s)	79, 448, 662, 1062, 1138, 1273
BshFI	GGCC	4 cut(s)	145, 1564, 1808, 1974
BshNI	GGYRCC	2 cut(s)	474, 1988
BsiHKAI	GWGCWC	1 cut(s)	776
BsiSI	CCGG	4 cut(s)	447, 695, 1685, 1992
BslFI	GGGAC	2 cut(s)	1328, 2415
BslI	CCNNNNNNNGG	6 cut(s)	471, 484, 701, 1532, 1565, 1847
BsmAI	GTCTC	2 cut(s)	892, 1575
BsmFI	GGGAC	2 cut(s)	1328, 2415
BsmI	GAATGC	2 cut(s)	620, 1726
BsnI	GGCC	4 cut(s)	145, 1564, 1808, 1974
Bso31I	GGTCTC	2 cut(s)	892, 1575
Bsp1286I	GDGCHC	2 cut(s)	776, 1381
Bsp13I	TCCGGA	1 cut(s)	446
Bsp19I	CCATGG	2 cut(s)	483, 1559
BspACI	CCGC	2 cut(s)	937, 1450
BspANI	GGCC	4 cut(s)	145, 1564, 1808, 1974
BspCNI	CTCAG	3 cut(s)	13, 1107, 2138
BspEI	TCCGGA	1 cut(s)	446
BspMAI	CTGCAG	1 cut(s)	1744
BspT107I	GGYRCC	2 cut(s)	474, 1988
BspTNI	GGTCTC	2 cut(s)	892, 1575
BsrDI	GCAATG	6 cut(s)	108, 997, 1296, 1464, 1648, 1827
BsrI	ACTGG	6 cut(s)	781, 1247, 1976, 2112, 2215, 2402
BssECI	CCNNGG	7 cut(s)	470, 483, 695, 1373, 1559, 1846, 1969
BssNI	GRCGYC	2 cut(s)	120, 475
BssSI	CACGAG	1 cut(s)	1671
BssT1I	CCWWGG	5 cut(s)	483, 1373, 1559, 1846, 1969
Bst2BI	CACGAG	1 cut(s)	1671
Bst2UI	CCWGG	6 cut(s)	471, 495, 1566, 1590, 1601, 2255
Bst4CI	ACNGT	7 cut(s)	456, 1146, 1177, 1219, 1553, 1930, 2164
Bst6I	CTCTTC	5 cut(s)	243, 534, 1457, 2187, 2349
BstACI	GRCGYC	2 cut(s)	120, 475
BstAPI	GCANNNNNTGC	1 cut(s)	147
BstBAI	YACGTR	1 cut(s)	560
BstC8I	GCNNGC	4 cut(s)	115, 143, 344, 820
BstDEI	CTNAG	4 cut(s)	21, 1068, 1115, 2125
BstDSI	CCRYGG	2 cut(s)	483, 1559
BstENI	CCTNNNNNAGG	1 cut(s)	1530
BstH2I	RGCGCY	1 cut(s)	478
BstHHI	GCGC	3 cut(s)	333, 477, 990
BstMAI	GTCTC	2 cut(s)	892, 1575
BstMWI	GCNNNNNNNGC	5 cut(s)	123, 147, 192, 339, 1721
BstNI	CCWGG	6 cut(s)	471, 495, 1566, 1590, 1601, 2255
BstNSI	RCATGY	2 cut(s)	337, 2153
BstSCI	CCNGG	8 cut(s)	469, 493, 694, 1564, 1588, 1599, 1684, 2253
BstSFI	CTRYAG	1 cut(s)	1740
BstV1I	GCAGC	6 cut(s)	79, 448, 662, 1062, 1138, 1273
BstV2I	GAAGAC	2 cut(s)	92, 2391
BstX2I	RGATCY	5 cut(s)	63, 670, 1180, 1837, 2155
BstXI	CCANNNNNNTGG	1 cut(s)	68
BstYI	RGATCY	5 cut(s)	63, 670, 1180, 1837, 2155
BsuI	GTATCC	1 cut(s)	1976
BsuRI	GGCC	4 cut(s)	145, 1564, 1808, 1974
BtgI	CCRYGG	2 cut(s)	483, 1559
BtsIMutI	CAGTG	3 cut(s)	774, 822, 1184
Cac8I	GCNNGC	4 cut(s)	115, 143, 344, 820
CaiI	CAGNNNCTG	1 cut(s)	95
CfoI	GCGC	3 cut(s)	333, 477, 990
Cfr13I	GGNCC	4 cut(s)	380, 1342, 1757, 1973
CseI	GACGC	1 cut(s)	1670
Csp6I	GTAC	8 cut(s)	932, 1173, 1390, 1523, 1554, 1989, 2208, 2418
CviAII	CATG	8 cut(s)	147, 334, 484, 714, 1543, 1560, 2150, 2363
CviQI	GTAC	8 cut(s)	932, 1173, 1390, 1523, 1554, 1989, 2208, 2418
DdeI	CTNAG	4 cut(s)	21, 1068, 1115, 2125
DinI	GGCGCC	1 cut(s)	476
DraI	TTTAAA	1 cut(s)	1483
DraIII	CACNNNGTG	1 cut(s)	2081
DrdI	GACNNNNNNGTC	1 cut(s)	1166
DseDI	GACNNNNNNGTC	1 cut(s)	1166
Eam1104I	CTCTTC	5 cut(s)	243, 534, 1457, 2187, 2349
EarI	CTCTTC	5 cut(s)	243, 534, 1457, 2187, 2349
Eco130I	CCWWGG	5 cut(s)	483, 1373, 1559, 1846, 1969
Eco147I	AGGCCT	1 cut(s)	1808
Eco24I	GRGCYC	1 cut(s)	1381
Eco31I	GGTCTC	2 cut(s)	892, 1575
Eco32I	GATATC	1 cut(s)	1014
Eco47I	GGWCC	3 cut(s)	380, 1342, 1757
Eco57I	CTGAAG	5 cut(s)	279, 774, 1208, 1305, 1548
EcoNI	CCTNNNNNAGG	1 cut(s)	1530
EcoO109I	RGGNCCY	1 cut(s)	1342
EcoRII	CCWGG	6 cut(s)	469, 493, 1564, 1588, 1599, 2253
EcoRV	GATATC	1 cut(s)	1014
EcoT14I	CCWWGG	5 cut(s)	483, 1373, 1559, 1846, 1969
EcoT22I	ATGCAT	2 cut(s)	541, 622
EcoT38I	GRGCYC	1 cut(s)	1381
EgeI	GGCGCC	1 cut(s)	476
EheI	GGCGCC	1 cut(s)	476
ErhI	CCWWGG	5 cut(s)	483, 1373, 1559, 1846, 1969
FaeI	CATG	8 cut(s)	150, 337, 487, 717, 1546, 1563, 2153, 2366
FalI	AAGNNNNNCTT	1 cut(s)	2404
FaqI	GGGAC	2 cut(s)	1328, 2415
FatI	CATG	8 cut(s)	146, 333, 483, 713, 1542, 1559, 2149, 2362
FauNDI	CATATG	2 cut(s)	348, 355
FbaI	TGATCA	1 cut(s)	1783
Fnu4HI	GCNGC	7 cut(s)	93, 462, 651, 938, 1076, 1152, 1287
FriOI	GRGCYC	1 cut(s)	1381
Fsp4HI	GCNGC	7 cut(s)	93, 462, 651, 938, 1076, 1152, 1287
FspBI	CTAG	6 cut(s)	276, 879, 903, 1374, 1578, 2180
FspI	TGCGCA	1 cut(s)	989
GlaI	GCGC	3 cut(s)	332, 476, 989
GluI	GCNGC	7 cut(s)	93, 462, 651, 938, 1076, 1152, 1287
GsuI	CTGGAG	3 cut(s)	516, 2082, 2276
HaeII	RGCGCY	1 cut(s)	478
HaeIII	GGCC	4 cut(s)	145, 1564, 1808, 1974
HapII	CCGG	4 cut(s)	447, 695, 1685, 1992
HgaI	GACGC	1 cut(s)	1670
HhaI	GCGC	3 cut(s)	333, 477, 990
Hin1I	GRCGYC	2 cut(s)	120, 475
Hin1II	CATG	8 cut(s)	150, 337, 487, 717, 1546, 1563, 2153, 2366
Hin6I	GCGC	3 cut(s)	331, 475, 988
HinP1I	GCGC	3 cut(s)	331, 475, 988
HincII	GTYRAC	5 cut(s)	975, 1159, 1240, 1252, 1296
HindII	GTYRAC	5 cut(s)	975, 1159, 1240, 1252, 1296
HinfI	GANTC	5 cut(s)	5, 519, 842, 1051, 1771
HpaI	GTTAAC	1 cut(s)	975
HpaII	CCGG	4 cut(s)	447, 695, 1685, 1992
HphI	GGTGA	5 cut(s)	110, 251, 269, 459, 1216
Hpy166II	GTNNAC	7 cut(s)	101, 975, 1159, 1240, 1252, 1296, 2105
Hpy188I	TCNGA	9 cut(s)	10, 298, 544, 793, 1116, 1276, 1315, 1324, 2128
Hpy8I	GTNNAC	7 cut(s)	101, 975, 1159, 1240, 1252, 1296, 2105
Hpy99I	CGWCG	1 cut(s)	122
HpyAV	CCTTC	9 cut(s)	5, 160, 1124, 1183, 1411, 1526, 1699, 2092, 2198
HpyCH4III	ACNGT	7 cut(s)	456, 1146, 1177, 1219, 1553, 1930, 2164
HpyCH4IV	ACGT	4 cut(s)	120, 559, 1654, 1857
HpyF10VI	GCNNNNNNNGC	5 cut(s)	123, 147, 192, 339, 1721
HpyF3I	CTNAG	4 cut(s)	21, 1068, 1115, 2125
HpySE526I	ACGT	4 cut(s)	120, 559, 1654, 1857
Hsp92I	GRCGYC	2 cut(s)	120, 475
Hsp92II	CATG	8 cut(s)	150, 337, 487, 717, 1546, 1563, 2153, 2366
HspAI	GCGC	3 cut(s)	331, 475, 988
KasI	GGCGCC	1 cut(s)	474
KflI	GGGWCCC	1 cut(s)	1342
Kpn2I	TCCGGA	1 cut(s)	446
KpnI	GGTACC	1 cut(s)	1992
Ksp22I	TGATCA	1 cut(s)	1783
KspAI	GTTAAC	1 cut(s)	975
LmnI	GCTCC	4 cut(s)	497, 1192, 1283, 1384
Lsp1109I	GCAGC	6 cut(s)	79, 448, 662, 1062, 1138, 1273
LweI	GCATC	5 cut(s)	250, 497, 548, 805, 1621
MaeI	CTAG	6 cut(s)	276, 879, 903, 1374, 1578, 2180
MaeII	ACGT	4 cut(s)	120, 559, 1654, 1857
MaeIII	GTNAC	3 cut(s)	1204, 2241, 2393
MflI	RGATCY	5 cut(s)	63, 670, 1180, 1837, 2155
MhlI	GDGCHC	2 cut(s)	776, 1381
MluCI	AATT	5 cut(s)	231, 655, 1325, 1404, 1478
Mly113I	GGCGCC	1 cut(s)	475
MlyI	GAGTC	3 cut(s)	14, 528, 836
MmeI	TCCRAC	1 cut(s)	1717
Mph1103I	ATGCAT	2 cut(s)	541, 622
MroI	TCCGGA	1 cut(s)	446
MroXI	GAANNNNTTC	2 cut(s)	2343, 2358
MseI	TTAA	8 cut(s)	549, 659, 974, 1482, 1794, 1944, 2046, 2349
MslI	CAYNNNNRTG	1 cut(s)	827
MspA1I	CMGCKG	1 cut(s)	92
MspI	CCGG	4 cut(s)	447, 695, 1685, 1992
MspR9I	CCNGG	8 cut(s)	471, 495, 696, 1566, 1590, 1601, 1686, 2255
Mva1269I	GAATGC	2 cut(s)	620, 1726
MvaI	CCWGG	6 cut(s)	471, 495, 1566, 1590, 1601, 2255
MwoI	GCNNNNNNNGC	5 cut(s)	123, 147, 192, 339, 1721
NarI	GGCGCC	1 cut(s)	475
NciI	CCSGG	2 cut(s)	696, 1686
NcoI	CCATGG	2 cut(s)	483, 1559
NdeI	CATATG	2 cut(s)	348, 355
NlaIII	CATG	8 cut(s)	150, 337, 487, 717, 1546, 1563, 2153, 2366
NmeAIII	GCCGAG	1 cut(s)	352
NmuCI	GTSAC	3 cut(s)	1204, 2241, 2393
NsbI	TGCGCA	1 cut(s)	989
NsiI	ATGCAT	2 cut(s)	541, 622
NspI	RCATGY	2 cut(s)	337, 2153
OliI	CACNNNNGTG	1 cut(s)	827
PceI	AGGCCT	1 cut(s)	1808
PcsI	WCGNNNNNNNCGW	1 cut(s)	1678
PctI	GAATGC	2 cut(s)	620, 1726
PdmI	GAANNNNTTC	2 cut(s)	2343, 2358
PfeI	GAWTC	2 cut(s)	1051, 1771
PflMI	CCANNNNNTGG	1 cut(s)	1565
PfoI	TCCNGGA	2 cut(s)	493, 1588
PkrI	GCNGC	7 cut(s)	94, 463, 652, 939, 1077, 1153, 1288
PleI	GAGTC	3 cut(s)	13, 527, 836
PluTI	GGCGCC	1 cut(s)	478
PpsI	GAGTC	3 cut(s)	13, 527, 836
Ppu21I	YACGTR	1 cut(s)	560
PpuMI	RGGWCCY	1 cut(s)	1342
Psp5II	RGGWCCY	1 cut(s)	1342
Psp6I	CCWGG	6 cut(s)	469, 493, 1564, 1588, 1599, 2253
PspGI	CCWGG	6 cut(s)	469, 493, 1564, 1588, 1599, 2253
PspPI	GGNCC	4 cut(s)	380, 1342, 1757, 1973
PspPPI	RGGWCCY	1 cut(s)	1342
PstI	CTGCAG	1 cut(s)	1744
PstNI	CAGNNNCTG	1 cut(s)	95
PsuI	RGATCY	5 cut(s)	63, 670, 1180, 1837, 2155
PvuII	CAGCTG	1 cut(s)	92
RsaI	GTAC	8 cut(s)	933, 1174, 1391, 1524, 1555, 1990, 2209, 2419
RsaNI	GTAC	8 cut(s)	932, 1173, 1390, 1523, 1554, 1989, 2208, 2418
RseI	CAYNNNNRTG	1 cut(s)	827
SaqAI	TTAA	8 cut(s)	549, 659, 974, 1482, 1794, 1944, 2046, 2349
SatI	GCNGC	7 cut(s)	93, 462, 651, 938, 1076, 1152, 1287
Sau96I	GGNCC	4 cut(s)	380, 1342, 1757, 1973
ScaI	AGTACT	1 cut(s)	1174
SchI	GAGTC	3 cut(s)	14, 528, 836
ScrFI	CCNGG	8 cut(s)	471, 495, 696, 1566, 1590, 1601, 1686, 2255
SduI	GDGCHC	2 cut(s)	776, 1381
SfaNI	GCATC	5 cut(s)	250, 497, 548, 805, 1621
SfcI	CTRYAG	1 cut(s)	1740
SfoI	GGCGCC	1 cut(s)	476
SinI	GGWCC	3 cut(s)	380, 1342, 1757
SmiMI	CAYNNNNRTG	1 cut(s)	827
SmlI	CTYRAG	3 cut(s)	1810, 1948, 2039
SmoI	CTYRAG	3 cut(s)	1810, 1948, 2039
Sse9I	AATT	5 cut(s)	231, 655, 1325, 1404, 1478
SseBI	AGGCCT	1 cut(s)	1808
SsiI	CCGC	2 cut(s)	937, 1450
SspDI	GGCGCC	1 cut(s)	474
SspMI	CTAG	6 cut(s)	276, 879, 903, 1374, 1578, 2180
StuI	AGGCCT	1 cut(s)	1808
StyD4I	CCNGG	8 cut(s)	469, 493, 694, 1564, 1588, 1599, 1684, 2253
StyI	CCWWGG	5 cut(s)	483, 1373, 1559, 1846, 1969
TaaI	ACNGT	7 cut(s)	456, 1146, 1177, 1219, 1553, 1930, 2164
TaiI	ACGT	4 cut(s)	123, 562, 1657, 1860
TaqI	TCGA	6 cut(s)	624, 1056, 1101, 1732, 1921, 2294
TaqII	GACCGA	1 cut(s)	1140
TasI	AATT	5 cut(s)	231, 655, 1325, 1404, 1478
TatI	WGTACW	3 cut(s)	931, 1172, 2417
TauI	GCSGC	1 cut(s)	940
TfiI	GAWTC	2 cut(s)	1051, 1771
Tru1I	TTAA	8 cut(s)	549, 659, 974, 1482, 1794, 1944, 2046, 2349
Tru9I	TTAA	8 cut(s)	549, 659, 974, 1482, 1794, 1944, 2046, 2349
TscAI	CASTG	3 cut(s)	781, 829, 1191
TseFI	GTSAC	3 cut(s)	1204, 2241, 2393
TseI	GCWGC	6 cut(s)	92, 461, 650, 1075, 1151, 1286
Tsp45I	GTSAC	3 cut(s)	1204, 2241, 2393
TspRI	CASTG	3 cut(s)	781, 829, 1191
Van91I	CCANNNNNTGG	1 cut(s)	1565
VpaK11BI	GGWCC	3 cut(s)	380, 1342, 1757
XagI	CCTNNNNNAGG	1 cut(s)	1530
XapI	RAATTY	2 cut(s)	1325, 1478
XbaI	TCTAGA	2 cut(s)	878, 2179
XceI	RCATGY	2 cut(s)	337, 2153
XmaJI	CCTAGG	1 cut(s)	1373
XmnI	GAANNNNTTC	2 cut(s)	2343, 2358
XspI	CTAG	6 cut(s)	276, 879, 903, 1374, 1578, 2180
ZraI	GACGTC	1 cut(s)	121
ZrmI	AGTACT	1 cut(s)	1174
Zsp2I	ATGCAT	2 cut(s)	541, 622

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.