AT5G09360

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0017200
Physical Location & Seq
Reverse (-)
2906426 .. 2908658
2233 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G09360.1

Sequence Viewer

Length: 1710 bp
ATGGAGTTCAAGCTCAACATTCCAAATACAATCATTAAAACTCTACAGACTATAGTCTTCTTTCTCTTTGTTCTTCTTGCATTCCAAATCGCGGAAGCCGAGATTCACCACCACACTTTCAAGATAAAGTCGAAAGCGTACACACGACTTTGTAATACCAACAAGATATTGACGGTGAACGGAGAATTTCCCGGACCAACGTTAAAAGCCTACCGTGGTGATAAGCTCATCGTCAATGTCATCAACAATGCAAACTACAACATTACTCTCCATTGGCACGGAGCAAGACAAATCAGGAATCCATGGTCGGACGGACCCGAATATGTGACTCAATGTCCGATCCGACCAGGAGAGAGCTATGTGTATAGAATCGATCTTAAGGTCGAAGAGGGAACGATTTGGTGGCATGCTCATAGCCAATGGGCACGTGCCACCGTCCATGGAGCTTTCATTGTCTACCCCAAACGTGGCTCATCTTATCCTTTTCCTAAGCCTCATCGTGAAATCCCGCTCATTCTAGGCGAATGGTGGAAGAAGGAAAACATAATGCATATACCAGGAAAAGCTAATAAAACCGGAGGAGAACCGGCCATCTCTGACTCATATACCATAAACGGACAACCCGGTTATCTATACCCCTGCTCTAAACCGGAAACATTCAAAATAACGGTGGTGCGTGGCCGTCGATACCTTCTACGGATTATCAACGCCGTGATGGACGAAGAACTCTTCTTTGCAATCGCAAACCACACCTTAACCGTTGTAGCCAAAGACGGTTTCTACTTAAAACATTTCAAATCTGATTATCTAATGATCACTCCGGGACAATCTATGGACGTCCTCCTCCATGCGAACCAACGGCCTAACCACTACTTTGTGGCGGCCAGAGCTTACTCCTCCGCATTTGGTGCCGGTTTTGACAAAACCACCACCACAGCCATATTACAATACAAAGGTGATACCTTAAACCGGATTAAACCGATTCTACCCTATCTGCCTCCTTACAATCGTACCGAGGCATCTACCCGGTTCACTAACCAATTCAGAAGTCAGCGTCCGGTTAACGTCCCGGTTAAAATCAACACTCGTCTTCTCTACGCGATCTCCGTGAACTTGATGAATTGCTCCGACGATAGACCTTGTACCGGTCCGTTCGGTAAGAGATTCTCTTCGAGCATTAACAACATCAGCTTCGTGAACCCATCGGTCGACATTCTCCGAGCTTATTATCGCCACATCGGAGGCGTTTTCCAGGAGGATTTCCCGAGAAATCCGCCGACGAAATTCAACTACACCGGTGAGAATCTTCCATTTCCGACTAGGTTCGGGACGAAAGTTGTGGTTCTCGATTATAACTCGAGCGTTGAGCTGATTCTACAGGGGACAACCGTGTGGGCTTCGAATATTCACCCGATTCATCTGCATGGGTATAACTTCTACGTCGTGGGTTCGGGTTTTGGGAATTTCGATCGTCGTAAAGATCCGTTGAGGTATAACCTAGTTGATCCACCGGAGGAGACAACCGTCGGTGTTCCTCGTAACGGTTGGACCGCCGTCAGATTCGTAGCTAATAATCCAGGGGTGTGGTTGTTGCATTGCCATATAGAGAGACATGCCACATGGGGAATGAACACAGTGTTCATAGTGAAAGATGGACCGACTAAATCTTCCCGTATGGTCAAGCCTCCTCCTGATCTTCCTTCTTGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0016491 GO:0016722 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

569

Amino Acids

64.88

Weight (kDa)

9.59

Isoelectric Point (pI)

37.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 42 - 155 2e-41 Multicopper oxidase
Cu-oxidase PF00394 168 - 319 6.9e-39 Multicopper oxidase
Cu-oxidase_2 PF07731 421 - 551 1.7e-41 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017200)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G09360
fragaria_vesca FvH4_5g30720
malus_domestica MD15G1412600.v1.1
prunus_persica Prupe.1G559300_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0225621
rosa_laevigata RLG00000001800
rosa_multiflora Rmu_co8516127.1_g000001
rosa_roxburghii Rroxscaffold_3G00233630
rosa_rugosa Rorug07G0231900
rosa_samantha Rh7AG371900 Rh7BG365800 Rh7DG376600
rosa_wichuraiana Rw7G031780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1353
AatII GACGTC 1 cut(s) 840
AccB1I GGYRCC 1 cut(s) 908
AccBSI CCGCTC 1 cut(s) 511
AccI GTMKAC 2 cut(s) 456, 1209
AccII CGCG 2 cut(s) 92, 1100
AciI CCGC 6 cut(s) 92, 509, 881, 900, 1274, 1551
AclI AACGTT 1 cut(s) 200
AclWI GGATC 3 cut(s) 334, 1475, 1499
AcoI YGGCCR 3 cut(s) 588, 679, 882
AcsI RAATTY 3 cut(s) 185, 1283, 1462
AcvI CACGTG 1 cut(s) 428
AcyI GRCGYC 1 cut(s) 837
AfaI GTAC 3 cut(s) 140, 1012, 1144
AfiI CCNNNNNNNGG 5 cut(s) 91, 467, 969, 1145, 1541
AflII CTTAAG 1 cut(s) 377
AgeI ACCGGT 2 cut(s) 1145, 1295
AgsI TTSAA 5 cut(s) 10, 121, 661, 796, 1288
AhdI GACNNNNNGTC 1 cut(s) 333
AjnI CCWGG 4 cut(s) 346, 556, 1251, 1576
AjuI GAANNNNNNNTTGG 2 cut(s) 761, 793
Alw26I GTCTC 2 cut(s) 1511, 1603
AlwI GGATC 3 cut(s) 334, 1475, 1499
Ama87I CYCGRG 2 cut(s) 1264, 1357
AoxI GGCC 4 cut(s) 588, 679, 860, 882
ApoI RAATTY 3 cut(s) 185, 1283, 1462
AsiGI ACCGGT 2 cut(s) 1145, 1295
AspS9I GGNCC 5 cut(s) 194, 314, 1148, 1548, 1655
AsuC2I CCSGG 5 cut(s) 192, 624, 822, 1027, 1070
AsuHPI GGTGA 6 cut(s) 98, 187, 230, 968, 1310, 1400
AsuII TTCGAA 1 cut(s) 1400
AvaI CYCGRG 2 cut(s) 1264, 1357
AvaII GGWCC 5 cut(s) 194, 314, 1148, 1548, 1655
BaeGI GKGCMC 1 cut(s) 427
BaeI ACNNNNGTAYC 2 cut(s) 994, 1027
BanI GGYRCC 1 cut(s) 908
BbrPI CACGTG 1 cut(s) 428
BbsI GAAGAC 2 cut(s) 49, 1082
BccI CCATC 4 cut(s) 599, 709, 1210, 1646
BceAI ACGGC 4 cut(s) 666, 695, 875, 1538
BcgI CGANNNNNNTGC 2 cut(s) 1402, 1436
BciT130I CCWGG 4 cut(s) 348, 558, 1253, 1578
BclI TGATCA 1 cut(s) 813
BcnI CCSGG 5 cut(s) 192, 624, 822, 1027, 1070
BcoDI GTCTC 2 cut(s) 1511, 1603
BfaI CTAG 3 cut(s) 518, 1320, 1499
BfmI CTRYAG 3 cut(s) 44, 51, 1376
BfrI CTTAAG 1 cut(s) 377
BisI GCNGC 1 cut(s) 882
BlsI GCNGC 1 cut(s) 883
Bme1390I CCNGG 9 cut(s) 192, 348, 558, 624, 822, 1027, 1070, 1253, 1578
Bme18I GGWCC 5 cut(s) 194, 314, 1148, 1548, 1655
BmeRI GACNNNNNGTC 1 cut(s) 333
BmeT110I CYCGRG 2 cut(s) 1264, 1357
BmgT120I GGNCC 5 cut(s) 194, 314, 1148, 1548, 1655
BmiI GGNNCC 2 cut(s) 316, 910
BmrFI CCNGG 9 cut(s) 192, 348, 558, 624, 822, 1027, 1070, 1253, 1578
BmsI GCATC 1 cut(s) 1028
BoxI GACNNNNGTC 3 cut(s) 53, 1523, 1553
BpiI GAAGAC 2 cut(s) 49, 1082
Bpu10I CCTNAGC 1 cut(s) 489
Bpu14I TTCGAA 1 cut(s) 1400
BpuMI CCSGG 5 cut(s) 192, 624, 822, 1027, 1070
Bsa29I ATCGAT 1 cut(s) 372
BsaAI YACGTR 1 cut(s) 428
BsaHI GRCGYC 1 cut(s) 837
BsaJI CCNNGG 5 cut(s) 214, 302, 439, 1014, 1577
BsaWI WCCGGW 7 cut(s) 575, 649, 969, 1057, 1145, 1295, 1510
BsaXI ACNNNNNCTCC 2 cut(s) 1088, 1118
Bsc4I CCNNNNNNNGG 5 cut(s) 91, 467, 969, 1145, 1541
Bse118I RCCGGY 4 cut(s) 586, 911, 1145, 1295
Bse3DI GCAATG 1 cut(s) 1594
BseBI CCWGG 4 cut(s) 348, 558, 1253, 1578
BseCI ATCGAT 1 cut(s) 372
BseDI CCNNGG 5 cut(s) 214, 302, 439, 1014, 1577
BseLI CCNNNNNNNGG 5 cut(s) 91, 467, 969, 1145, 1541
BseMI GCAATG 1 cut(s) 1594
BseRI GAGGAG 5 cut(s) 594, 833, 886, 1529, 1677
BseSI GKGCMC 1 cut(s) 427
Bsh1236I CGCG 2 cut(s) 92, 1100
Bsh1285I CGRYCG 2 cut(s) 1209, 1471
BshFI GGCC 4 cut(s) 590, 681, 862, 884
BshNI GGYRCC 1 cut(s) 908
BshTI ACCGGT 2 cut(s) 1145, 1295
BshVI ATCGAT 1 cut(s) 372
BsiEI CGRYCG 2 cut(s) 1209, 1471
BsiHKCI CYCGRG 2 cut(s) 1264, 1357
BslFI GGGAC 4 cut(s) 837, 1052, 1342, 1396
BslI CCNNNNNNNGG 5 cut(s) 91, 467, 969, 1145, 1541
BsmAI GTCTC 2 cut(s) 1511, 1603
BsmFI GGGAC 4 cut(s) 837, 1052, 1342, 1396
BsmI GAATGC 1 cut(s) 80
BsnI GGCC 4 cut(s) 590, 681, 862, 884
BsoBI CYCGRG 2 cut(s) 1264, 1357
Bsp119I TTCGAA 1 cut(s) 1400
Bsp1286I GDGCHC 1 cut(s) 427
Bsp143I GATC 8 cut(s) 339, 373, 813, 1101, 1468, 1480, 1504, 1693
Bsp19I CCATGG 2 cut(s) 302, 439
BspACI CCGC 6 cut(s) 92, 509, 881, 900, 1274, 1551
BspANI GGCC 4 cut(s) 590, 681, 862, 884
BspDI ATCGAT 1 cut(s) 372
BspFNI CGCG 2 cut(s) 92, 1100
BspLI GGNNCC 2 cut(s) 316, 910
BspPI GGATC 3 cut(s) 334, 1475, 1499
BspT104I TTCGAA 1 cut(s) 1400
BspT107I GGYRCC 1 cut(s) 908
BspTI CTTAAG 1 cut(s) 377
BsrBI CCGCTC 1 cut(s) 511
BsrDI GCAATG 1 cut(s) 1594
BsrFI RCCGGY 4 cut(s) 586, 911, 1145, 1295
BssAI RCCGGY 4 cut(s) 586, 911, 1145, 1295
BssECI CCNNGG 5 cut(s) 214, 302, 439, 1014, 1577
BssMI GATC 8 cut(s) 339, 373, 813, 1101, 1468, 1480, 1504, 1693
BssNI GRCGYC 1 cut(s) 837
BssT1I CCWWGG 2 cut(s) 302, 439
Bst2UI CCWGG 4 cut(s) 348, 558, 1253, 1578
Bst6I CTCTTC 3 cut(s) 381, 734, 1174
BstACI GRCGYC 1 cut(s) 837
BstAFI CTTAAG 1 cut(s) 377
BstAPI GCANNNNNTGC 1 cut(s) 908
BstBAI YACGTR 1 cut(s) 428
BstBI TTCGAA 1 cut(s) 1400
BstC8I GCNNGC 1 cut(s) 408
BstDEI CTNAG 1 cut(s) 489
BstDSI CCRYGG 3 cut(s) 214, 302, 439
BstFNI CGCG 2 cut(s) 92, 1100
BstKTI GATC 8 cut(s) 342, 376, 816, 1104, 1471, 1483, 1507, 1696
BstMAI GTCTC 2 cut(s) 1511, 1603
BstMBI GATC 8 cut(s) 339, 373, 813, 1101, 1468, 1480, 1504, 1693
BstMCI CGRYCG 2 cut(s) 1209, 1471
BstMWI GCNNNNNNNGC 2 cut(s) 887, 908
BstNI CCWGG 4 cut(s) 348, 558, 1253, 1578
BstNSI RCATGY 2 cut(s) 410, 1616
BstPAI GACNNNNGTC 3 cut(s) 53, 1523, 1553
BstSCI CCNGG 9 cut(s) 190, 346, 556, 622, 820, 1025, 1068, 1251, 1576
BstSFI CTRYAG 3 cut(s) 44, 51, 1376
BstSLI GKGCMC 1 cut(s) 427
BstUI CGCG 2 cut(s) 92, 1100
BstV2I GAAGAC 2 cut(s) 49, 1082
BstX2I RGATCY 1 cut(s) 1480
BstXI CCANNNNNNTGG 1 cut(s) 1584
BstYI RGATCY 1 cut(s) 1480
Bsu15I ATCGAT 1 cut(s) 372
BsuRI GGCC 4 cut(s) 590, 681, 862, 884
BsuTUI ATCGAT 1 cut(s) 372
BtgI CCRYGG 3 cut(s) 214, 302, 439
BtsIMutI CAGTG 1 cut(s) 1641
Cac8I GCNNGC 1 cut(s) 408
Cfr10I RCCGGY 4 cut(s) 586, 911, 1145, 1295
Cfr13I GGNCC 5 cut(s) 194, 314, 1148, 1548, 1655
ClaI ATCGAT 1 cut(s) 372
CpoI CGGWCCG 1 cut(s) 1148
CseI GACGC 1 cut(s) 1043
Csp6I GTAC 3 cut(s) 139, 1011, 1143
CspAI ACCGGT 2 cut(s) 1145, 1295
CspI CGGWCCG 1 cut(s) 1148
CviAII CATG 7 cut(s) 303, 407, 440, 848, 1424, 1613, 1620
CviQI GTAC 3 cut(s) 139, 1011, 1143
DdeI CTNAG 1 cut(s) 489
DpnI GATC 8 cut(s) 341, 375, 815, 1103, 1470, 1482, 1506, 1695
DpnII GATC 8 cut(s) 339, 373, 813, 1101, 1468, 1480, 1504, 1693
DriI GACNNNNNGTC 1 cut(s) 333
EaeI YGGCCR 3 cut(s) 588, 679, 882
Eam1104I CTCTTC 3 cut(s) 381, 734, 1174
Eam1105I GACNNNNNGTC 1 cut(s) 333
EarI CTCTTC 3 cut(s) 381, 734, 1174
EciI GGCGGA 1 cut(s) 1263
Eco130I CCWWGG 2 cut(s) 302, 439
Eco47I GGWCC 5 cut(s) 194, 314, 1148, 1548, 1655
Eco72I CACGTG 1 cut(s) 428
Eco88I CYCGRG 2 cut(s) 1264, 1357
EcoRII CCWGG 4 cut(s) 346, 556, 1251, 1576
EcoT14I CCWWGG 2 cut(s) 302, 439
EcoT22I ATGCAT 1 cut(s) 552
ErhI CCWWGG 2 cut(s) 302, 439
FaeI CATG 7 cut(s) 306, 410, 443, 851, 1427, 1616, 1623
FaqI GGGAC 4 cut(s) 837, 1052, 1342, 1396
FatI CATG 7 cut(s) 302, 406, 439, 847, 1423, 1612, 1619
FauI CCCGC 1 cut(s) 516
FbaI TGATCA 1 cut(s) 813
FblI GTMKAC 2 cut(s) 456, 1209
Fnu4HI GCNGC 1 cut(s) 882
Fsp4HI GCNGC 1 cut(s) 882
FspBI CTAG 3 cut(s) 518, 1320, 1499
GluI GCNGC 1 cut(s) 882
HaeIII GGCC 4 cut(s) 590, 681, 862, 884
HgaI GACGC 1 cut(s) 1043
Hin1I GRCGYC 1 cut(s) 837
Hin1II CATG 7 cut(s) 306, 410, 443, 851, 1427, 1616, 1623
HincII GTYRAC 2 cut(s) 1063, 1210
HindII GTYRAC 2 cut(s) 1063, 1210
HpaI GTTAAC 1 cut(s) 1063
HphI GGTGA 6 cut(s) 98, 187, 230, 968, 1310, 1400
Hpy166II GTNNAC 8 cut(s) 141, 178, 457, 1032, 1063, 1111, 1198, 1210
Hpy188III TCNNGA 8 cut(s) 121, 295, 500, 1195, 1264, 1327, 1346, 1691
Hpy8I GTNNAC 8 cut(s) 141, 178, 457, 1032, 1063, 1111, 1198, 1210
Hpy99I CGWCG 6 cut(s) 687, 1133, 1282, 1445, 1476, 1529
HpyAV CCTTC 3 cut(s) 529, 701, 1710
HpyCH4IV ACGT 6 cut(s) 200, 427, 466, 837, 1065, 1440
HpyCH4V TGCA 6 cut(s) 80, 251, 550, 737, 1423, 1594
HpyF10VI GCNNNNNNNGC 2 cut(s) 887, 908
HpyF3I CTNAG 1 cut(s) 489
HpySE526I ACGT 6 cut(s) 200, 427, 466, 837, 1065, 1440
Hsp92I GRCGYC 1 cut(s) 837
Hsp92II CATG 7 cut(s) 306, 410, 443, 851, 1427, 1616, 1623
Ksp22I TGATCA 1 cut(s) 813
KspAI GTTAAC 1 cut(s) 1063
Kzo9I GATC 8 cut(s) 339, 373, 813, 1101, 1468, 1480, 1504, 1693
LmnI GCTCC 3 cut(s) 281, 443, 1130
LweI GCATC 1 cut(s) 1028
MaeI CTAG 3 cut(s) 518, 1320, 1499
MaeII ACGT 6 cut(s) 200, 427, 466, 837, 1065, 1440
MaeIII GTNAC 2 cut(s) 325, 1538
MalI GATC 8 cut(s) 341, 375, 815, 1103, 1470, 1482, 1506, 1695
MbiI CCGCTC 1 cut(s) 511
MboI GATC 8 cut(s) 339, 373, 813, 1101, 1468, 1480, 1504, 1693
MflI RGATCY 1 cut(s) 1480
MhlI GDGCHC 1 cut(s) 427
MluCI AATT 5 cut(s) 185, 1040, 1120, 1283, 1462
MlyI GAGTC 2 cut(s) 322, 593
MmeI TCCRAC 5 cut(s) 288, 367, 1152, 1340, 1526
Mph1103I ATGCAT 1 cut(s) 552
MslI CAYNNNNRTG 1 cut(s) 1422
MspCI CTTAAG 1 cut(s) 377
MspR9I CCNGG 9 cut(s) 192, 348, 558, 624, 822, 1027, 1070, 1253, 1578
Mva1269I GAATGC 1 cut(s) 80
MvaI CCWGG 4 cut(s) 348, 558, 1253, 1578
MvnI CGCG 2 cut(s) 92, 1100
MwoI GCNNNNNNNGC 2 cut(s) 887, 908
NciI CCSGG 5 cut(s) 192, 624, 822, 1027, 1070
NcoI CCATGG 2 cut(s) 302, 439
NdeII GATC 8 cut(s) 339, 373, 813, 1101, 1468, 1480, 1504, 1693
NlaIII CATG 7 cut(s) 306, 410, 443, 851, 1427, 1616, 1623
NlaIV GGNNCC 2 cut(s) 316, 910
NmeAIII GCCGAG 1 cut(s) 124
NmuCI GTSAC 1 cut(s) 325
NsiI ATGCAT 1 cut(s) 552
NspI RCATGY 2 cut(s) 410, 1616
NspV TTCGAA 1 cut(s) 1400
PaeI GCATGC 1 cut(s) 410
PaeR7I CTCGAG 1 cut(s) 1357
PcsI WCGNNNNNNNCGW 2 cut(s) 96, 1104
PctI GAATGC 1 cut(s) 80
PfeI GAWTC 9 cut(s) 103, 298, 369, 982, 1164, 1303, 1372, 1414, 1560
PfoI TCCNGGA 3 cut(s) 190, 820, 1251
PinAI ACCGGT 2 cut(s) 1145, 1295
PkrI GCNGC 1 cut(s) 883
Ple19I CGATCG 1 cut(s) 1471
PleI GAGTC 2 cut(s) 322, 593
PmaCI CACGTG 1 cut(s) 428
PmlI CACGTG 1 cut(s) 428
PpsI GAGTC 2 cut(s) 322, 593
Ppu21I YACGTR 1 cut(s) 428
PshAI GACNNNNGTC 3 cut(s) 53, 1523, 1553
PsiI TTATAA 1 cut(s) 1353
Psp1406I AACGTT 1 cut(s) 200
Psp6I CCWGG 4 cut(s) 346, 556, 1251, 1576
PspCI CACGTG 1 cut(s) 428
PspGI CCWGG 4 cut(s) 346, 556, 1251, 1576
PspN4I GGNNCC 2 cut(s) 316, 910
PspPI GGNCC 5 cut(s) 194, 314, 1148, 1548, 1655
PspXI VCTCGAGB 1 cut(s) 1357
PsuI RGATCY 1 cut(s) 1480
PvuI CGATCG 1 cut(s) 1471
RsaI GTAC 3 cut(s) 140, 1012, 1144
RsaNI GTAC 3 cut(s) 139, 1011, 1143
RseI CAYNNNNRTG 1 cut(s) 1422
Rsr2I CGGWCCG 1 cut(s) 1148
RsrII CGGWCCG 1 cut(s) 1148
SalI GTCGAC 1 cut(s) 1208
SatI GCNGC 1 cut(s) 882
Sau3AI GATC 8 cut(s) 339, 373, 813, 1101, 1468, 1480, 1504, 1693
Sau96I GGNCC 5 cut(s) 194, 314, 1148, 1548, 1655
SchI GAGTC 2 cut(s) 322, 593
ScrFI CCNGG 9 cut(s) 192, 348, 558, 624, 822, 1027, 1070, 1253, 1578
SduI GDGCHC 1 cut(s) 427
SfaNI GCATC 1 cut(s) 1028
SfcI CTRYAG 3 cut(s) 44, 51, 1376
Sfr274I CTCGAG 1 cut(s) 1357
SfuI TTCGAA 1 cut(s) 1400
SgrAI CRCCGGYG 1 cut(s) 1295
SinI GGWCC 5 cut(s) 194, 314, 1148, 1548, 1655
SlaI CTCGAG 1 cut(s) 1357
SmiMI CAYNNNNRTG 1 cut(s) 1422
SmlI CTYRAG 2 cut(s) 377, 1357
SmoI CTYRAG 2 cut(s) 377, 1357
SphI GCATGC 1 cut(s) 410
Sse9I AATT 5 cut(s) 185, 1040, 1120, 1283, 1462
SsiI CCGC 6 cut(s) 92, 509, 881, 900, 1274, 1551
SspI AATATT 1 cut(s) 1405
SspMI CTAG 3 cut(s) 518, 1320, 1499
StyD4I CCNGG 9 cut(s) 190, 346, 556, 622, 820, 1025, 1068, 1251, 1576
StyI CCWWGG 2 cut(s) 302, 439
TaiI ACGT 6 cut(s) 203, 430, 469, 840, 1068, 1443
TaqII GACCGA 2 cut(s) 1195, 1672
TasI AATT 5 cut(s) 185, 1040, 1120, 1283, 1462
TauI GCSGC 1 cut(s) 884
TfiI GAWTC 9 cut(s) 103, 298, 369, 982, 1164, 1303, 1372, 1414, 1560
TscAI CASTG 1 cut(s) 1641
TseFI GTSAC 1 cut(s) 325
Tsp45I GTSAC 1 cut(s) 325
TspDTI ATGAA 5 cut(s) 439, 1133, 1406, 1630, 1643
TspGWI ACGGA 8 cut(s) 195, 294, 327, 630, 712, 1096, 1140, 1473
TspRI CASTG 1 cut(s) 1641
Vha464I CTTAAG 1 cut(s) 377
VpaK11BI GGWCC 5 cut(s) 194, 314, 1148, 1548, 1655
XapI RAATTY 3 cut(s) 185, 1283, 1462
XceI RCATGY 2 cut(s) 410, 1616
XhoI CTCGAG 1 cut(s) 1357
XmiI GTMKAC 2 cut(s) 456, 1209
XspI CTAG 3 cut(s) 518, 1320, 1499
ZraI GACGTC 1 cut(s) 838
Zsp2I ATGCAT 1 cut(s) 552
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.