RLG00000001800

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0017200
Physical Location & Seq
Forward (+)
20940189 .. 20944289
4101 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000001800

Sequence Viewer

Length: 1707 bp
ATGGTTAACTCTATAGGGTTTTTCGCTTTTTGTGCTGTTTTTCTTTATCTTGATGCTGCAAATGGGAAAACTCATCACCATAAGTTTGTGGTAAAATCGTCTTCTTATAGCCGACTCTGTCGTAGTAAGGACATCTTGACTGTGAATGGGAGATTCCCAGGGCCAACTTTGAAAGCTCACAGAGGGGATAAAATGGTTATTGAAGTCCATAACAAGGCAAACTATAATATCAGTCTTCACTGGCACGGAGTTAGACTAGTAAGAAATCCTTGGTCGGATGGACCAGAGTATATCACACAATGCCCTATACAGCCAGGAAACAAGTACACCTACAGAATTGAGTTTACTACAGAAGAAGGAACAATATGGTGGCATGCACATAGTGGATGGGCAAGAGCGACGGTTCATGGAGCCATTTTTGTTTATCCCAATCCTGGATCAAGGTATCCTTTTCCGAAACCTTATGCCGAGGTCCCTATCATACTAGGTGAGTGGTGGAAGAGAGATGTCATGGAGATACCAAGTAATGCAAATTTAACAGGAGGAGAACCCGTACTCTCAGATGCCTATACTATAAATGGAGAACCAGGCTTTCTATATCCATGCTCCAAAAAAGGGACCTTTAATATGCTAGTTGAACATGGAAAAACCTATCTTCTTCGGATCATTAGCGCGGTAATGGATGAAGAGCTATTCTTCGGCATTGCACATCACAAGCTGATATTGGTCGGAAAAGATGGTTCCTATACAAAACAAGTTGAAACCTCCTACATAATGATAGCCCCTGGCCAATCCATGGACCTGTTACTAGAAGCAAACCAACCTCATGGGCTCTATGTCATGGCTGCAAGAGCATATTCAAGCGCCATCGGAGCTGGTTTCGACAAGACCATGACATCTGCCATTGTTAAATATCATGGTTCAGATGATCACGACCACCAGCTTCGAGGACGTCCTGCTTTCCCACATCTTCCACCCTATAACAGAACACAAGCAGCAGCAGACTTTACCAAGCAATTTAGGAGCCTTTCAACAAAAGACCACCCTACCAAAGTTCCATTACAAGTAGACACCCACTTGTTTTTTACCATATCCGTAAACCTACTTAACTGCAGTAATAAACCGTGCACTGGTCCCTTTGGGAAAAGATTTTCAGCTAGTGTCAACAACATAAGCTTTGTCATGCCACCGTCGATTGACATCCTTCGAGCTTACTATTATAAAATTCCGGGGGTATTCGAGAAGGATTTTCCAGAAAAACCGCCAACGGAATTCAATTACACTGGTGATGATCTTCCAGAGAGATTTTTGGCACCTTCCTATGGGACTAAGGTGATGCTTTTGAAGTACAATGCAAGTGTTGAGCTGGTTTTGCAAGGGACCAATGTGTTAGCAAGTGATAACCATCCTGTACATTTACATGGATATAGCTTCTATGTTGTCGGCTTCGGGTTTGGAAATTTCAACCCTAAACAGGATCCTTTGAGATACAATCTTGTTGATCCTCCTGAGGAGAATACTGTTGGAGTTCCTAAAAATGGCTGGGTCGCAATCCGATTCAGAGCAGATAATCCAGGCGTGTGGTTGATGCATTGTCACATAGAGCGTCATCAAACATGGGGAATGTCTATGGTGTTCCTAGTCCAAAATGGTGTTAGTCATCATAATAGAATTCTATCACCTCCTCATGATTTGCCTACTTGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0016491 GO:0016722 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

569

Amino Acids

64.02

Weight (kDa)

8.67

Isoelectric Point (pI)

38.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 31 - 144 4.6e-40 Multicopper oxidase
Cu-oxidase PF00394 157 - 308 1.3e-35 Multicopper oxidase
Cu-oxidase_2 PF07731 416 - 550 7.8e-44 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017200)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G09360
fragaria_vesca FvH4_5g30720
malus_domestica MD15G1412600.v1.1
prunus_persica Prupe.1G559300_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0225621
rosa_laevigata RLG00000001800
rosa_multiflora Rmu_co8516127.1_g000001
rosa_roxburghii Rroxscaffold_3G00233630
rosa_rugosa Rorug07G0231900
rosa_samantha Rh7AG371900 Rh7BG365800 Rh7DG376600
rosa_wichuraiana Rw7G031780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1221
AatII GACGTC 1 cut(s) 955
AccB1I GGYRCC 1 cut(s) 1312
AccB7I CCANNNNNTGG 1 cut(s) 796
AccI GTMKAC 1 cut(s) 1068
AccII CGCG 1 cut(s) 674
AciI CCGC 2 cut(s) 674, 1262
AclWI GGATC 5 cut(s) 445, 671, 1472, 1485, 1496
AcoI YGGCCR 1 cut(s) 787
AcsI RAATTY 5 cut(s) 532, 1224, 1271, 1459, 1671
AcyI GRCGYC 1 cut(s) 952
AdeI CACNNNGTG 1 cut(s) 383
AfaI GTAC 4 cut(s) 326, 555, 1349, 1413
AfiI CCNNNNNNNGG 8 cut(s) 214, 434, 615, 796, 1130, 1322, 1474, 1538
AgsI TTSAA 9 cut(s) 172, 203, 638, 761, 861, 1032, 1276, 1345, 1465
AhlI ACTAGT 1 cut(s) 256
AjnI CCWGG 6 cut(s) 157, 313, 433, 586, 784, 1573
Alw21I GWGCWC 1 cut(s) 1130
Alw44I GTGCAC 1 cut(s) 1126
AlwI GGATC 5 cut(s) 445, 671, 1472, 1485, 1496
AoxI GGCC 2 cut(s) 161, 787
ApaLI GTGCAC 1 cut(s) 1126
ApeKI GCWGC 4 cut(s) 56, 845, 995, 998
ApoI RAATTY 5 cut(s) 532, 1224, 1271, 1459, 1671
AspLEI GCGC 2 cut(s) 674, 866
AspS9I GGNCC 7 cut(s) 161, 281, 472, 618, 799, 1133, 1380
AsuC2I CCSGG 1 cut(s) 1230
AsuHPI GGTGA 5 cut(s) 68, 500, 1298, 1345, 1671
AvaII GGWCC 6 cut(s) 281, 472, 618, 799, 1133, 1380
AxyI CCTNAGG 1 cut(s) 1509
BaeGI GKGCMC 1 cut(s) 1130
BalI TGGCCA 1 cut(s) 789
BamHI GGATCC 1 cut(s) 1477
BanI GGYRCC 1 cut(s) 1312
BanII GRGCYC 1 cut(s) 834
BbsI GAAGAC 2 cut(s) 93, 227
Bbv12I GWGCWC 1 cut(s) 1130
BbvI GCAGC 4 cut(s) 43, 832, 1007, 1010
BccI CCATC 5 cut(s) 272, 381, 731, 875, 1413
BciT130I CCWGG 6 cut(s) 159, 315, 435, 588, 786, 1575
BciVI GTATCC 1 cut(s) 456
BclI TGATCA 1 cut(s) 928
BcnI CCSGG 1 cut(s) 1230
BcuI ACTAGT 1 cut(s) 256
BfaI CTAG 6 cut(s) 257, 485, 632, 809, 1158, 1640
BfmI CTRYAG 4 cut(s) 12, 331, 348, 1111
BfoI RGCGCY 1 cut(s) 867
BfuI GTATCC 1 cut(s) 456
BisI GCNGC 4 cut(s) 57, 846, 996, 999
BlsI GCNGC 4 cut(s) 58, 847, 997, 1000
Bme1390I CCNGG 7 cut(s) 159, 315, 435, 588, 786, 1230, 1575
Bme18I GGWCC 6 cut(s) 281, 472, 618, 799, 1133, 1380
BmgT120I GGNCC 7 cut(s) 161, 281, 472, 618, 799, 1133, 1380
BmiI GGNNCC 9 cut(s) 412, 474, 619, 742, 1025, 1135, 1314, 1381, 1479
BmrFI CCNGG 7 cut(s) 159, 315, 435, 588, 786, 1230, 1575
BmsI GCATC 4 cut(s) 43, 553, 1326, 1578
BpiI GAAGAC 2 cut(s) 93, 227
BpuMI CCSGG 1 cut(s) 1230
BsaBI GATNNNNATC 2 cut(s) 1199, 1404
BsaHI GRCGYC 1 cut(s) 952
BsaJI CCNNGG 7 cut(s) 157, 158, 269, 468, 784, 795, 1229
BsaXI ACNNNNNCTCC 2 cut(s) 537, 567
Bsc4I CCNNNNNNNGG 8 cut(s) 214, 434, 615, 796, 1130, 1322, 1474, 1538
Bse1I ACTGG 3 cut(s) 245, 1135, 1288
Bse21I CCTNAGG 1 cut(s) 1509
Bse3DI GCAATG 1 cut(s) 702
Bse8I GATNNNNATC 2 cut(s) 1199, 1404
BseBI CCWGG 6 cut(s) 159, 315, 435, 588, 786, 1575
BseDI CCNNGG 7 cut(s) 157, 158, 269, 468, 784, 795, 1229
BseGI GGATG 5 cut(s) 283, 392, 688, 1200, 1405
BseJI GATNNNNATC 2 cut(s) 1199, 1404
BseLI CCNNNNNNNGG 8 cut(s) 214, 434, 615, 796, 1130, 1322, 1474, 1538
BseMI GCAATG 1 cut(s) 702
BseMII CTCAG 2 cut(s) 573, 1500
BseNI ACTGG 3 cut(s) 245, 1135, 1288
BseRI GAGGAG 3 cut(s) 558, 1526, 1674
BseSI GKGCMC 1 cut(s) 1130
BseXI GCAGC 4 cut(s) 43, 832, 1007, 1010
BseYI CCCAGC 1 cut(s) 1542
Bsh1236I CGCG 1 cut(s) 674
BshFI GGCC 2 cut(s) 163, 789
BshNI GGYRCC 1 cut(s) 1312
BsiHKAI GWGCWC 1 cut(s) 1130
BsiSI CCGG 1 cut(s) 1229
BslFI GGGAC 5 cut(s) 458, 631, 1119, 1339, 1393
BslI CCNNNNNNNGG 8 cut(s) 214, 434, 615, 796, 1130, 1322, 1474, 1538
BsmFI GGGAC 5 cut(s) 458, 631, 1119, 1339, 1393
BsnI GGCC 2 cut(s) 163, 789
Bsp1286I GDGCHC 2 cut(s) 834, 1130
Bsp1407I TGTACA 1 cut(s) 1411
Bsp143I GATC 6 cut(s) 437, 663, 928, 1291, 1477, 1501
Bsp19I CCATGG 1 cut(s) 795
BspACI CCGC 2 cut(s) 674, 1262
BspANI GGCC 2 cut(s) 163, 789
BspCNI CTCAG 2 cut(s) 572, 1501
BspFNI CGCG 1 cut(s) 674
BspHI TCATGA 1 cut(s) 1687
BspLI GGNNCC 9 cut(s) 412, 474, 619, 742, 1025, 1135, 1314, 1381, 1479
BspMAI CTGCAG 1 cut(s) 1115
BspPI GGATC 5 cut(s) 445, 671, 1472, 1485, 1496
BspQI GCTCTTC 1 cut(s) 681
BspT107I GGYRCC 1 cut(s) 1312
BsrDI GCAATG 1 cut(s) 702
BsrGI TGTACA 1 cut(s) 1411
BsrI ACTGG 3 cut(s) 245, 1135, 1288
BssECI CCNNGG 7 cut(s) 157, 158, 269, 468, 784, 795, 1229
BssMI GATC 6 cut(s) 437, 663, 928, 1291, 1477, 1501
BssNI GRCGYC 1 cut(s) 952
BssT1I CCWWGG 2 cut(s) 269, 795
Bst2UI CCWGG 6 cut(s) 159, 315, 435, 588, 786, 1575
Bst4CI ACNGT 5 cut(s) 142, 403, 1125, 1191, 1522
Bst6I CTCTTC 2 cut(s) 494, 681
BstACI GRCGYC 1 cut(s) 952
BstAUI TGTACA 1 cut(s) 1411
BstC8I GCNNGC 1 cut(s) 375
BstDEI CTNAG 3 cut(s) 559, 1329, 1509
BstDSI CCRYGG 1 cut(s) 795
BstF5I GGATG 5 cut(s) 283, 392, 688, 1200, 1405
BstFNI CGCG 1 cut(s) 674
BstH2I RGCGCY 1 cut(s) 867
BstHHI GCGC 2 cut(s) 674, 866
BstKTI GATC 6 cut(s) 440, 666, 931, 1294, 1480, 1504
BstMBI GATC 6 cut(s) 437, 663, 928, 1291, 1477, 1501
BstMWI GCNNNNNNNGC 4 cut(s) 32, 851, 872, 1372
BstNI CCWGG 6 cut(s) 159, 315, 435, 588, 786, 1575
BstNSI RCATGY 1 cut(s) 377
BstSCI CCNGG 7 cut(s) 157, 313, 433, 586, 784, 1228, 1573
BstSFI CTRYAG 4 cut(s) 12, 331, 348, 1111
BstSLI GKGCMC 1 cut(s) 1130
BstUI CGCG 1 cut(s) 674
BstV1I GCAGC 4 cut(s) 43, 832, 1007, 1010
BstV2I GAAGAC 2 cut(s) 93, 227
BstX2I RGATCY 1 cut(s) 1477
BstXI CCANNNNNNTGG 2 cut(s) 827, 1581
BstYI RGATCY 1 cut(s) 1477
Bsu36I CCTNAGG 1 cut(s) 1509
BsuI GTATCC 1 cut(s) 456
BsuRI GGCC 2 cut(s) 163, 789
BtgI CCRYGG 1 cut(s) 795
BtsCI GGATG 5 cut(s) 283, 392, 688, 1200, 1405
BtsIMutI CAGTG 3 cut(s) 238, 1128, 1281
Cac8I GCNNGC 1 cut(s) 375
CciI TCATGA 1 cut(s) 1687
CfoI GCGC 2 cut(s) 674, 866
Cfr13I GGNCC 7 cut(s) 161, 281, 472, 618, 799, 1133, 1380
CseI GACGC 1 cut(s) 1595
Csp6I GTAC 4 cut(s) 325, 554, 1348, 1412
CviQI GTAC 4 cut(s) 325, 554, 1348, 1412
DdeI CTNAG 3 cut(s) 559, 1329, 1509
DpnI GATC 6 cut(s) 439, 665, 930, 1293, 1479, 1503
DpnII GATC 6 cut(s) 437, 663, 928, 1291, 1477, 1501
DraIII CACNNNGTG 1 cut(s) 383
EaeI YGGCCR 1 cut(s) 787
Eam1104I CTCTTC 2 cut(s) 494, 681
EarI CTCTTC 2 cut(s) 494, 681
Eco130I CCWWGG 2 cut(s) 269, 795
Eco24I GRGCYC 1 cut(s) 834
Eco47I GGWCC 6 cut(s) 281, 472, 618, 799, 1133, 1380
Eco81I CCTNAGG 1 cut(s) 1509
EcoO109I RGGNCCY 2 cut(s) 472, 618
EcoRI GAATTC 2 cut(s) 1271, 1671
EcoRII CCWGG 6 cut(s) 157, 313, 433, 586, 784, 1573
EcoT14I CCWWGG 2 cut(s) 269, 795
EcoT22I ATGCAT 1 cut(s) 1593
EcoT38I GRGCYC 1 cut(s) 834
ErhI CCWWGG 2 cut(s) 269, 795
FalI AAGNNNNNCTT 6 cut(s) 119, 151, 253, 285, 433, 465
FaqI GGGAC 5 cut(s) 458, 631, 1119, 1339, 1393
FbaI TGATCA 1 cut(s) 928
FblI GTMKAC 1 cut(s) 1068
Fnu4HI GCNGC 4 cut(s) 57, 846, 996, 999
FokI GGATG 5 cut(s) 290, 399, 695, 1187, 1392
FriOI GRGCYC 1 cut(s) 834
Fsp4HI GCNGC 4 cut(s) 57, 846, 996, 999
FspBI CTAG 6 cut(s) 257, 485, 632, 809, 1158, 1640
GlaI GCGC 2 cut(s) 673, 865
GluI GCNGC 4 cut(s) 57, 846, 996, 999
GsaI CCCAGC 1 cut(s) 1546
HaeII RGCGCY 1 cut(s) 867
HaeIII GGCC 2 cut(s) 163, 789
HapII CCGG 1 cut(s) 1229
HgaI GACGC 1 cut(s) 1595
HhaI GCGC 2 cut(s) 674, 866
Hin1I GRCGYC 1 cut(s) 952
Hin6I GCGC 2 cut(s) 672, 864
HinP1I GCGC 2 cut(s) 672, 864
HincII GTYRAC 2 cut(s) 7, 1165
HindII GTYRAC 2 cut(s) 7, 1165
HindIII AAGCTT 1 cut(s) 1174
HinfI GANTC 3 cut(s) 114, 153, 1557
HpaI GTTAAC 1 cut(s) 7
HpaII CCGG 1 cut(s) 1229
HphI GGTGA 5 cut(s) 68, 500, 1298, 1345, 1671
Hpy166II GTNNAC 7 cut(s) 7, 327, 345, 1069, 1099, 1128, 1165
Hpy188I TCNGA 9 cut(s) 277, 456, 562, 663, 731, 872, 925, 1556, 1562
Hpy188III TCNNGA 8 cut(s) 50, 136, 932, 1240, 1253, 1298, 1508, 1688
Hpy8I GTNNAC 7 cut(s) 7, 327, 345, 1069, 1099, 1128, 1165
Hpy99I CGWCG 2 cut(s) 403, 1195
HpyAV CCTTC 4 cut(s) 350, 1214, 1237, 1326
HpyCH4III ACNGT 5 cut(s) 142, 403, 1125, 1191, 1522
HpyCH4IV ACGT 1 cut(s) 952
HpyF10VI GCNNNNNNNGC 4 cut(s) 32, 851, 872, 1372
HpyF3I CTNAG 3 cut(s) 559, 1329, 1509
HpySE526I ACGT 1 cut(s) 952
Hsp92I GRCGYC 1 cut(s) 952
HspAI GCGC 2 cut(s) 672, 864
Ksp22I TGATCA 1 cut(s) 928
KspAI GTTAAC 1 cut(s) 7
Kzo9I GATC 6 cut(s) 437, 663, 928, 1291, 1477, 1501
LguI GCTCTTC 1 cut(s) 681
LmnI GCTCC 4 cut(s) 410, 611, 872, 1023
Lsp1109I GCAGC 4 cut(s) 43, 832, 1007, 1010
LweI GCATC 4 cut(s) 43, 553, 1326, 1578
MaeI CTAG 6 cut(s) 257, 485, 632, 809, 1158, 1640
MaeII ACGT 1 cut(s) 952
MaeIII GTNAC 2 cut(s) 804, 1595
MalI GATC 6 cut(s) 439, 665, 930, 1293, 1479, 1503
MboI GATC 6 cut(s) 437, 663, 928, 1291, 1477, 1501
MflI RGATCY 1 cut(s) 1477
MhlI GDGCHC 2 cut(s) 834, 1130
MlsI TGGCCA 1 cut(s) 789
MluCI AATT 8 cut(s) 336, 532, 1016, 1224, 1271, 1276, 1459, 1671
MluNI TGGCCA 1 cut(s) 789
MlyI GAGTC 1 cut(s) 108
MmeI TCCRAC 3 cut(s) 255, 709, 1504
Mox20I TGGCCA 1 cut(s) 789
Mph1103I ATGCAT 1 cut(s) 1593
MscI TGGCCA 1 cut(s) 789
MseI TTAA 5 cut(s) 6, 536, 624, 909, 1107
MslI CAYNNNNRTG 1 cut(s) 1419
Msp20I TGGCCA 1 cut(s) 789
MspI CCGG 1 cut(s) 1229
MspR9I CCNGG 7 cut(s) 159, 315, 435, 588, 786, 1230, 1575
MvaI CCWGG 6 cut(s) 159, 315, 435, 588, 786, 1575
MvnI CGCG 1 cut(s) 674
MwoI GCNNNNNNNGC 4 cut(s) 32, 851, 872, 1372
NciI CCSGG 1 cut(s) 1230
NcoI CCATGG 1 cut(s) 795
NdeII GATC 6 cut(s) 437, 663, 928, 1291, 1477, 1501
NlaIV GGNNCC 9 cut(s) 412, 474, 619, 742, 1025, 1135, 1314, 1381, 1479
NmeAIII GCCGAG 1 cut(s) 493
NmuCI GTSAC 1 cut(s) 1595
NsiI ATGCAT 1 cut(s) 1593
NspI RCATGY 1 cut(s) 377
PaeI GCATGC 1 cut(s) 377
PagI TCATGA 1 cut(s) 1687
PasI CCCWGGG 1 cut(s) 158
PciSI GCTCTTC 1 cut(s) 681
PfeI GAWTC 2 cut(s) 153, 1557
PflFI GACNNNGTC 1 cut(s) 117
PflMI CCANNNNNTGG 1 cut(s) 796
PfoI TCCNGGA 1 cut(s) 433
PkrI GCNGC 4 cut(s) 58, 847, 997, 1000
PleI GAGTC 1 cut(s) 108
PpsI GAGTC 1 cut(s) 108
PpuMI RGGWCCY 2 cut(s) 472, 618
PsiI TTATAA 1 cut(s) 1221
Psp5II RGGWCCY 2 cut(s) 472, 618
Psp6I CCWGG 6 cut(s) 157, 313, 433, 586, 784, 1573
PspFI CCCAGC 1 cut(s) 1542
PspGI CCWGG 6 cut(s) 157, 313, 433, 586, 784, 1573
PspN4I GGNNCC 9 cut(s) 412, 474, 619, 742, 1025, 1135, 1314, 1381, 1479
PspPI GGNCC 7 cut(s) 161, 281, 472, 618, 799, 1133, 1380
PspPPI RGGWCCY 2 cut(s) 472, 618
PstI CTGCAG 1 cut(s) 1115
PsuI RGATCY 1 cut(s) 1477
PsyI GACNNNGTC 1 cut(s) 117
RsaI GTAC 4 cut(s) 326, 555, 1349, 1413
RsaNI GTAC 4 cut(s) 325, 554, 1348, 1412
RseI CAYNNNNRTG 1 cut(s) 1419
SapI GCTCTTC 1 cut(s) 681
SaqAI TTAA 5 cut(s) 6, 536, 624, 909, 1107
SatI GCNGC 4 cut(s) 57, 846, 996, 999
Sau3AI GATC 6 cut(s) 437, 663, 928, 1291, 1477, 1501
Sau96I GGNCC 7 cut(s) 161, 281, 472, 618, 799, 1133, 1380
SchI GAGTC 1 cut(s) 108
ScrFI CCNGG 7 cut(s) 159, 315, 435, 588, 786, 1230, 1575
SduI GDGCHC 2 cut(s) 834, 1130
SfaNI GCATC 4 cut(s) 43, 553, 1326, 1578
SfcI CTRYAG 4 cut(s) 12, 331, 348, 1111
SinI GGWCC 6 cut(s) 281, 472, 618, 799, 1133, 1380
SmiMI CAYNNNNRTG 1 cut(s) 1419
SpeI ACTAGT 1 cut(s) 256
SphI GCATGC 1 cut(s) 377
Sse9I AATT 8 cut(s) 336, 532, 1016, 1224, 1271, 1276, 1459, 1671
SsiI CCGC 2 cut(s) 674, 1262
SspMI CTAG 6 cut(s) 257, 485, 632, 809, 1158, 1640
StyD4I CCNGG 7 cut(s) 157, 313, 433, 586, 784, 1228, 1573
StyI CCWWGG 2 cut(s) 269, 795
TaaI ACNGT 5 cut(s) 142, 403, 1125, 1191, 1522
TaiI ACGT 1 cut(s) 955
TaqI TCGA 5 cut(s) 882, 946, 1193, 1207, 1239
TasI AATT 8 cut(s) 336, 532, 1016, 1224, 1271, 1276, 1459, 1671
TatI WGTACW 3 cut(s) 324, 1347, 1411
TfiI GAWTC 2 cut(s) 153, 1557
Tru1I TTAA 5 cut(s) 6, 536, 624, 909, 1107
Tru9I TTAA 5 cut(s) 6, 536, 624, 909, 1107
TscAI CASTG 3 cut(s) 245, 1135, 1288
TseFI GTSAC 1 cut(s) 1595
TseI GCWGC 4 cut(s) 56, 845, 995, 998
Tsp45I GTSAC 1 cut(s) 1595
TspDTI ATGAA 2 cut(s) 395, 699
TspGWI ACGGA 3 cut(s) 261, 1084, 1283
TspRI CASTG 3 cut(s) 245, 1135, 1288
Tth111I GACNNNGTC 1 cut(s) 117
Van91I CCANNNNNTGG 1 cut(s) 796
VneI GTGCAC 1 cut(s) 1126
VpaK11BI GGWCC 6 cut(s) 281, 472, 618, 799, 1133, 1380
XapI RAATTY 5 cut(s) 532, 1224, 1271, 1459, 1671
XceI RCATGY 1 cut(s) 377
XmiI GTMKAC 1 cut(s) 1068
XspI CTAG 6 cut(s) 257, 485, 632, 809, 1158, 1640
ZraI GACGTC 1 cut(s) 953
Zsp2I ATGCAT 1 cut(s) 1593
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.