Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007989

Physical Location & Seq

Genomic Coordinates Forward (+)

2916151 .. 2920823

Gene Structure 4673 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G09400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2577 bp

ATGGCGGAGGAAAGCAGTATGGAAGGTTCTGAAAAAGAAGAGATCGATAGCTCAGGTGGTGGTTTTGGAGATATGGCATCCATGGATTCTATCGAGTCTCGATGGGTTATTCAAGACGATGATGATTCCGAGATCGGCGTTGACGATGATAATGATGGATTCGACGGTACTGGACTCGAATCCGATGAGGACGAGATACCTGAGCATCGCCTGATCCGTACTGGTCCACGTGTTGATTCCTTCGACGTGGAAGCGCTTGAAGTTCCTGGTGCTCCGAGAAATGATTACGAGGACTTGACCGTTGGGAGGAAAGTGTTGCTTGCATTTCAAACATTAGGGGTTGTCTTTGGAGATGTAGGAACCAGCCCGTTGTATACGTTCAGTGTAATGTTCAGTAAATCACCTGTCCAAGAAAAAGAAGATGTTATTGGAGCACTGTCACTAGTTTTATACACTTTACTTTTGGTCCCCCTTATTAAATATGTTCTTGTTGTTCTATGGGCAAATGATGATGGTGAAGGGGGGACCTTTGCGTTATACTCATTAATCTCTCGTCATGCCAAGATTAGTCTTATCCCAAACCAACTTCGCTCAGACACCCGAATTTCAAGTTTTAGACTGAAGGTGCCTTGCCCTGAGCTTGAGAGATCATTGAAACTAAAAGAAAAACTCGAGAATTCATTAATTCTGAAGAAAATTCTCCTCGTGCTAGTTCTTGCTGGAACTTCCATGGTGATTGCCGATGGGGTTGTAACTCCTGCAATGTCAGTAATGTCAGCTGTTGGTGGACTTAAGGTCGGAGTTGATGTAGTTGAGCAAGATCAAGTGGTGATGATTTCAGTTGCATTTCTGGTGATCCTCTTTAGTCTACAAAAATATGGGACGAGTAAGATGGGACTAGTAGTAGGTCCTGCCTTACTTATATGGTTCTGTTCTCTTGCTGGTATTGGAATTTACAACCTGATCAAATACGATAGCAGTGTTTACAGAGCATTCAACCCTGTCCACATCTATTACTTCTTCAAGAGGAATTCTATAAATGCGTGGTATGCACTTGGAGGTTGCATTCTCTGTGCTACAGGCTCAGAGGCATTATTTGCAGACCTTTGCTACTTTTCTGTTAGATCAGTCCAGCTTACATTTGTGTGTCTTGTCCTGCCGTGCCTCATGTTGGGTTATATGGGACAAGCTGCATACCTGATGGAGAATCATGCGGATGCTAGTCAAGCTTTCTTTTCATCTGTTCCAGGCTCTGCATTCTGGCCAGTCCTTTTCATAGCCAACATTGCAGCTCTGATTGCCAGTCGCACAATGACGACTGCAACATTTTCATGTATTAAACAGTCAACAGCTCTGGGTTGTTTCCCTCGTCTCAAAATTATTCACACTTCTCGAAAATTTATGGGCCAGATTTATATACCTGTCCTAAACTGGTTCCTGCTTGCCGTTTGCCTGGTCGTCGTCTGCTCAATCTCAAGTATCGATGAGATTGGAAATGCATATGGGATGGCTGAGCTAGGAGTGATGATGACAACTACAATTCTAGTGACGTTAATCATGCTTCTTATATGGCAGATAAACATCGTAATCGTGATTGCCTTTCTGGTAGTTTTTCTCGGAGTGGAATTAGTCTTTTTCTCATCAGTCATAGCGAGTGTTGGGGATGGAAGCTGGATAATATTGGTCTTTGCCGTAATCATGTTTGGTATAATGTATATTTGGAACTATGGAAGTAAGCTCAGGTATGAAACAGAAGTCGAACAAAAGCTGTCAATGGATTTAATGAGAGAACTTGGGTGCAACCTGGGAACGATAAGAGCTCCTGGTATCGGTTTGCTGTACAATGAGTTAGTGAAGGGAGTACCGGCAATATTTGGCCATTTTCTGACTACACTTCCTGCAATCCATTCCATGGTCATTTTCGTCTGCATAAAATATGTCCCGGTTCCAGTTGTACCACAGAATGAGAGGTTCCTCTTCAGACGTGTCTGCACCAAAAGCTATCACTTATTCCGTTGCATTGCCAGGTATGGTTATAAAGACGCAAGAAAGGAGACCCACCAAGCATTTGAGCAGCTACTGATCGAGAGCCTCGAGAAATTCATCCGAAGGGAAGCACAAGAACGTTCCTTGGAGAGCGACGGGAACGATGATTCAGACTCAGAGGAAGATTTCCCAGGTTCTAGAGTCGTAATTGGCCCCAACGGAAGCATGTACTCGATGGGGGTTCCCCTTCTCTCTGAGTACAGAGACTTAAACAAACCGATCATGGAAATGAACACTTCATCTGATCACACAAACCACCATCCCTTTGACACATCATCTGACTCCTCTGTATCTGAAGCTGAGCAAAGCCTGGAGAGAGAGTTATCGTTCATACACAAAGCGAAAGAATCAGGGGTGGTGTATCTTCTCGGGCATGGCGATATAAGAGCAAGAAAAGATTCATGGTTCATCAAGAAGTTAGTCATAAACTACTTCTACACATTCCTGAGGAAAAACTGCAGGAGAGGGATCGCAAATTTGAGTGTGCCTCAGTCGCATCTGATGCAGGTCGGTATGACATACATGGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0004016 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008150 GO:0008324 GO:0009975 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015318 GO:0015672 GO:0016020 GO:0016829 GO:0016849 GO:0022857 GO:0022890 GO:0030001 GO:0031090 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0071804 GO:0071805 GO:0071944 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

K_trans

Protein Analysis

858

Amino Acids

95.35

Weight (kDa)

5.25

Isoelectric Point (pI)

41.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
K_trans	PF02705	107 - 593	1.9e-144	K+ potassium transporter integral membrane domain
K_trans_C	PF22776	608 - 856	3.3e-23	K+ potassium transporter C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007989)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33530 AT4G33530 AT5G09400
fragaria_vesca	FvH4_2g11940 FvH4_2g11940 FvH4_2g11940 FvH4_2g11940
malus_domestica	MD05G1045000.v1.1 MD10G1051900.v1.1
prunus_persica	Prupe.8G060500_v2.0.a1 Prupe.8G060500_v2.0.a1 Prupe.8G060500_v2.0.a1
pyrus_communis	pycom05g03750 pycom10g03670
rosa_chinensis	RchiOBHm_Chr6g0271831
rosa_laevigata	RLG00000013711
rosa_multiflora	Rmu_sc0002396.1_g000028
rosa_roxburghii	Rroxscaffold_173G00434990 Rroxscaffold_7G00196740
rosa_rugosa	Rorug06G0063500
rosa_samantha	Rh6AG181700 Rh6BG185800 Rh6CG182300
rosa_wichuraiana	Rw6G015650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2037
Acc36I	ACCTGC	1 cut(s)	2542
AccB1I	GGYRCC	1 cut(s)	625
AccB7I	CCANNNNNTGG	1 cut(s)	1912
AccI	GTMKAC	2 cut(s)	374, 868
AciI	CCGC	2 cut(s)	5, 1214
AclI	AACGTT	1 cut(s)	2125
AclWI	GGATC	3 cut(s)	208, 850, 2522
AcoI	YGGCCR	2 cut(s)	1262, 1876
AcsI	RAATTY	8 cut(s)	603, 676, 696, 951, 1030, 1397, 2099, 2521
AcuI	CTGAAG	4 cut(s)	641, 710, 1963, 2361
AcvI	CACGTG	1 cut(s)	230
AfaI	GTAC	7 cut(s)	169, 220, 1841, 1863, 1956, 2216, 2246
AfeI	AGCGCT	1 cut(s)	255
AfiI	CCNNNNNNNGG	4 cut(s)	306, 1171, 1829, 1912
AflII	CTTAAG	1 cut(s)	791
AflIII	ACRYGT	2 cut(s)	229, 1984
AgsI	TTSAA	7 cut(s)	113, 260, 329, 609, 655, 997, 1024
AhdI	GACNNNNNGTC	1 cut(s)	794
AhlI	ACTAGT	2 cut(s)	442, 898
AjiI	CACGTC	2 cut(s)	247, 1985
AjnI	CCWGG	8 cut(s)	265, 1246, 1452, 1803, 1822, 2024, 2176, 2355
AjuI	GAANNNNNNNTTGG	2 cut(s)	411, 443
Alw21I	GWGCWC	3 cut(s)	274, 436, 1822
Alw26I	GTCTC	4 cut(s)	102, 1376, 2048, 2244
AlwI	GGATC	3 cut(s)	208, 850, 2522
AlwNI	CAGNNNCTG	2 cut(s)	1253, 2080
Ama87I	CYCGRG	3 cut(s)	671, 2093, 2414
Aor51HI	AGCGCT	1 cut(s)	255
AoxI	GGCC	4 cut(s)	1262, 1405, 1876, 2197
ApeKI	GCWGC	3 cut(s)	1190, 1289, 2074
ApoI	RAATTY	8 cut(s)	603, 676, 696, 951, 1030, 1397, 2099, 2521
AseI	ATTAAT	2 cut(s)	545, 683
Asp700I	GAANNNNTTC	1 cut(s)	2443
AspLEI	GCGC	1 cut(s)	256
AspS9I	GGNCC	6 cut(s)	224, 466, 525, 908, 1405, 2198
AsuC2I	CCSGG	1 cut(s)	1943
AsuHPI	GGTGA	5 cut(s)	393, 527, 745, 841, 865
AvaI	CYCGRG	3 cut(s)	671, 2093, 2414
AvaII	GGWCC	4 cut(s)	224, 466, 525, 908
AxyI	CCTNAGG	1 cut(s)	2492
BalI	TGGCCA	2 cut(s)	1264, 1878
BanI	GGYRCC	1 cut(s)	625
BanII	GRGCYC	1 cut(s)	1822
BauI	CACGAG	1 cut(s)	704
BbrPI	CACGTG	1 cut(s)	230
Bbv12I	GWGCWC	3 cut(s)	274, 436, 1822
BbvI	GCAGC	3 cut(s)	1177, 1301, 2086
BceAI	ACGGC	3 cut(s)	1144, 1430, 1676
BciT130I	CCWGG	8 cut(s)	267, 1248, 1454, 1805, 1824, 2026, 2178, 2357
BclI	TGATCA	2 cut(s)	963, 2290
BcnI	CCSGG	1 cut(s)	1943
BcoDI	GTCTC	4 cut(s)	102, 1376, 2048, 2244
BcuI	ACTAGT	2 cut(s)	442, 898
BfaI	CTAG	7 cut(s)	443, 710, 899, 1221, 1517, 1544, 2184
BfmI	CTRYAG	2 cut(s)	1077, 2503
BfoI	RGCGCY	1 cut(s)	257
BfrI	CTTAAG	1 cut(s)	791
BfuAI	ACCTGC	1 cut(s)	2542
BisI	GCNGC	3 cut(s)	1191, 1290, 2075
BlpI	GCTNAGC	2 cut(s)	1512, 2346
BlsI	GCNGC	3 cut(s)	1192, 1291, 2076
Bme1390I	CCNGG	9 cut(s)	267, 1248, 1454, 1805, 1824, 1943, 2026, 2178, 2357
Bme18I	GGWCC	4 cut(s)	224, 466, 525, 908
BmeRI	GACNNNNNGTC	1 cut(s)	794
BmeT110I	CYCGRG	3 cut(s)	671, 2093, 2414
BmgBI	CACGTC	2 cut(s)	247, 1985
BmgT120I	GGNCC	6 cut(s)	224, 466, 525, 908, 1405, 2198
BmiI	GGNNCC	9 cut(s)	361, 468, 526, 627, 1436, 1947, 1973, 2200, 2229
BmrFI	CCNGG	9 cut(s)	267, 1248, 1454, 1805, 1824, 1943, 2026, 2178, 2357
BmsI	GCATC	5 cut(s)	86, 214, 1207, 2538, 2551
BplI	GAGNNNNNCTC	2 cut(s)	2518, 2550
BpmI	CTGGAG	1 cut(s)	2378
Bpu10I	CCTNAGC	4 cut(s)	52, 201, 636, 1739
Bpu1102I	GCTNAGC	2 cut(s)	1512, 2346
BpuEI	CTTGAG	2 cut(s)	662, 1459
BpuMI	CCSGG	1 cut(s)	1943
Bsa29I	ATCGAT	2 cut(s)	45, 1482
BsaAI	YACGTR	1 cut(s)	230
BsaBI	GATNNNNATC	1 cut(s)	1580
BsaI	GGTCTC	1 cut(s)	2048
BsaJI	CCNNGG	6 cut(s)	81, 729, 1804, 1911, 2130, 2176
BsaXI	ACNNNNNCTCC	4 cut(s)	792, 822, 2351, 2381
Bsc4I	CCNNNNNNNGG	4 cut(s)	306, 1171, 1829, 1912
Bse118I	RCCGGY	1 cut(s)	1864
Bse1I	ACTGG	6 cut(s)	175, 226, 1265, 1302, 1436, 1949
Bse21I	CCTNAGG	1 cut(s)	2492
Bse3DI	GCAATG	3 cut(s)	768, 1284, 2019
Bse8I	GATNNNNATC	1 cut(s)	1580
BseBI	CCWGG	8 cut(s)	267, 1248, 1454, 1805, 1824, 2026, 2178, 2357
BseCI	ATCGAT	2 cut(s)	45, 1482
BseDI	CCNNGG	6 cut(s)	81, 729, 1804, 1911, 2130, 2176
BseGI	GGATG	6 cut(s)	77, 1222, 1512, 1669, 2103, 2305
BseJI	GATNNNNATC	1 cut(s)	1580
BseLI	CCNNNNNNNGG	4 cut(s)	306, 1171, 1829, 1912
BseMI	GCAATG	3 cut(s)	768, 1284, 2019
BseNI	ACTGG	6 cut(s)	175, 226, 1265, 1302, 1436, 1949
BseRI	GAGGAG	2 cut(s)	692, 2320
BseXI	GCAGC	3 cut(s)	1177, 1301, 2086
BsgI	GTGCAG	1 cut(s)	1975
BshFI	GGCC	4 cut(s)	1264, 1407, 1878, 2199
BshNI	GGYRCC	1 cut(s)	625
BshVI	ATCGAT	2 cut(s)	45, 1482
BsiHKAI	GWGCWC	3 cut(s)	274, 436, 1822
BsiHKCI	CYCGRG	3 cut(s)	671, 2093, 2414
BsiSI	CCGG	2 cut(s)	1865, 1943
BslFI	GGGAC	6 cut(s)	452, 538, 895, 909, 1197, 1925
BslI	CCNNNNNNNGG	4 cut(s)	306, 1171, 1829, 1912
BsmAI	GTCTC	4 cut(s)	102, 1376, 2048, 2244
BsmBI	CGTCTC	1 cut(s)	1376
BsmFI	GGGAC	6 cut(s)	452, 538, 895, 909, 1197, 1925
BsmI	GAATGC	3 cut(s)	992, 1065, 1256
BsnI	GGCC	4 cut(s)	1264, 1407, 1878, 2199
Bso31I	GGTCTC	1 cut(s)	2048
BsoBI	CYCGRG	3 cut(s)	671, 2093, 2414
Bsp1286I	GDGCHC	3 cut(s)	274, 436, 1822
Bsp1407I	TGTACA	1 cut(s)	1839
Bsp1720I	GCTNAGC	2 cut(s)	1512, 2346
Bsp19I	CCATGG	3 cut(s)	81, 729, 1911
BspACI	CCGC	2 cut(s)	5, 1214
BspANI	GGCC	4 cut(s)	1264, 1407, 1878, 2199
BspDI	ATCGAT	2 cut(s)	45, 1482
BspLI	GGNNCC	9 cut(s)	361, 468, 526, 627, 1436, 1947, 1973, 2200, 2229
BspMAI	CTGCAG	1 cut(s)	2507
BspMI	ACCTGC	1 cut(s)	2542
BspPI	GGATC	3 cut(s)	208, 850, 2522
BspT107I	GGYRCC	1 cut(s)	625
BspTI	CTTAAG	1 cut(s)	791
BspTNI	GGTCTC	1 cut(s)	2048
BsrDI	GCAATG	3 cut(s)	768, 1284, 2019
BsrFI	RCCGGY	1 cut(s)	1864
BsrGI	TGTACA	1 cut(s)	1839
BsrI	ACTGG	6 cut(s)	175, 226, 1265, 1302, 1436, 1949
BssAI	RCCGGY	1 cut(s)	1864
BssECI	CCNNGG	6 cut(s)	81, 729, 1804, 1911, 2130, 2176
BssNAI	GTATAC	1 cut(s)	375
BssSI	CACGAG	1 cut(s)	704
BssT1I	CCWWGG	4 cut(s)	81, 729, 1911, 2130
Bst1107I	GTATAC	1 cut(s)	375
Bst2BI	CACGAG	1 cut(s)	704
Bst2UI	CCWGG	8 cut(s)	267, 1248, 1454, 1805, 1824, 2026, 2178, 2357
Bst4CI	ACNGT	4 cut(s)	167, 301, 438, 1344
Bst6I	CTCTTC	2 cut(s)	33, 1982
BstAFI	CTTAAG	1 cut(s)	791
BstAPI	GCANNNNNTGC	2 cut(s)	1097, 2548
BstAUI	TGTACA	1 cut(s)	1839
BstBAI	YACGTR	1 cut(s)	230
BstC8I	GCNNGC	2 cut(s)	321, 1443
BstDSI	CCRYGG	3 cut(s)	81, 729, 1911
BstF5I	GGATG	6 cut(s)	77, 1222, 1512, 1669, 2103, 2305
BstH2I	RGCGCY	1 cut(s)	257
BstHHI	GCGC	1 cut(s)	256
BstMAI	GTCTC	4 cut(s)	102, 1376, 2048, 2244
BstMWI	GCNNNNNNNGC	8 cut(s)	1049, 1097, 1226, 1286, 1298, 1998, 2539, 2548
BstNI	CCWGG	8 cut(s)	267, 1248, 1454, 1805, 1824, 2026, 2178, 2357
BstNSI	RCATGY	1 cut(s)	2215
BstSCI	CCNGG	9 cut(s)	265, 1246, 1452, 1803, 1822, 1941, 2024, 2176, 2355
BstSFI	CTRYAG	2 cut(s)	1077, 2503
BstV1I	GCAGC	3 cut(s)	1177, 1301, 2086
BstZ17I	GTATAC	1 cut(s)	375
Bsu15I	ATCGAT	2 cut(s)	45, 1482
Bsu36I	CCTNAGG	1 cut(s)	2492
BsuRI	GGCC	4 cut(s)	1264, 1407, 1878, 2199
BsuTUI	ATCGAT	2 cut(s)	45, 1482
BtgI	CCRYGG	3 cut(s)	81, 729, 1911
BtgZI	GCGATG	1 cut(s)	191
BtrI	CACGTC	2 cut(s)	247, 1985
BtsCI	GGATG	6 cut(s)	77, 1222, 1512, 1669, 2103, 2305
BtsI	GCAGTG	1 cut(s)	985
BtsIMutI	CAGTG	3 cut(s)	388, 434, 985
BveI	ACCTGC	1 cut(s)	2542
Cac8I	GCNNGC	2 cut(s)	321, 1443
CaiI	CAGNNNCTG	2 cut(s)	1253, 2080
CfoI	GCGC	1 cut(s)	256
Cfr10I	RCCGGY	1 cut(s)	1864
Cfr13I	GGNCC	6 cut(s)	224, 466, 525, 908, 1405, 2198
ClaI	ATCGAT	2 cut(s)	45, 1482
CseI	GACGC	1 cut(s)	2051
Csp6I	GTAC	7 cut(s)	168, 219, 1840, 1862, 1955, 2215, 2245
CviQI	GTAC	7 cut(s)	168, 219, 1840, 1862, 1955, 2215, 2245
DriI	GACNNNNNGTC	1 cut(s)	794
EaeI	YGGCCR	2 cut(s)	1262, 1876
Eam1104I	CTCTTC	2 cut(s)	33, 1982
Eam1105I	GACNNNNNGTC	1 cut(s)	794
EarI	CTCTTC	2 cut(s)	33, 1982
EciI	GGCGGA	1 cut(s)	20
Ecl136II	GAGCTC	1 cut(s)	1820
Eco130I	CCWWGG	4 cut(s)	81, 729, 1911, 2130
Eco24I	GRGCYC	1 cut(s)	1822
Eco31I	GGTCTC	1 cut(s)	2048
Eco47I	GGWCC	4 cut(s)	224, 466, 525, 908
Eco47III	AGCGCT	1 cut(s)	255
Eco53kI	GAGCTC	1 cut(s)	1820
Eco57I	CTGAAG	4 cut(s)	641, 710, 1963, 2361
Eco72I	CACGTG	1 cut(s)	230
Eco81I	CCTNAGG	1 cut(s)	2492
Eco88I	CYCGRG	3 cut(s)	671, 2093, 2414
EcoICRI	GAGCTC	1 cut(s)	1820
EcoO109I	RGGNCCY	2 cut(s)	525, 908
EcoRI	GAATTC	2 cut(s)	676, 1030
EcoRII	CCWGG	8 cut(s)	265, 1246, 1452, 1803, 1822, 2024, 2176, 2355
EcoT14I	CCWWGG	4 cut(s)	81, 729, 1911, 2130
EcoT22I	ATGCAT	1 cut(s)	1501
EcoT38I	GRGCYC	1 cut(s)	1822
ErhI	CCWWGG	4 cut(s)	81, 729, 1911, 2130
Esp3I	CGTCTC	1 cut(s)	1376
FalI	AAGNNNNNCTT	2 cut(s)	303, 335
FaqI	GGGAC	6 cut(s)	452, 538, 895, 909, 1197, 1925
FauNDI	CATATG	1 cut(s)	1501
FbaI	TGATCA	2 cut(s)	963, 2290
FblI	GTMKAC	2 cut(s)	374, 868
Fnu4HI	GCNGC	3 cut(s)	1191, 1290, 2075
FokI	GGATG	6 cut(s)	64, 1229, 1519, 1676, 2090, 2292
FriOI	GRGCYC	1 cut(s)	1822
Fsp4HI	GCNGC	3 cut(s)	1191, 1290, 2075
FspBI	CTAG	7 cut(s)	443, 710, 899, 1221, 1517, 1544, 2184
GlaI	GCGC	1 cut(s)	255
GluI	GCNGC	3 cut(s)	1191, 1290, 2075
GsuI	CTGGAG	1 cut(s)	2378
HaeII	RGCGCY	1 cut(s)	257
HaeIII	GGCC	4 cut(s)	1264, 1407, 1878, 2199
HapII	CCGG	2 cut(s)	1865, 1943
HgaI	GACGC	1 cut(s)	2051
HhaI	GCGC	1 cut(s)	256
Hin6I	GCGC	1 cut(s)	254
HinP1I	GCGC	1 cut(s)	254
HincII	GTYRAC	2 cut(s)	142, 1347
HindII	GTYRAC	2 cut(s)	142, 1347
HindIII	AAGCTT	1 cut(s)	1227
HpaII	CCGG	2 cut(s)	1865, 1943
HphI	GGTGA	5 cut(s)	393, 527, 745, 841, 865
Hpy166II	GTNNAC	8 cut(s)	142, 227, 375, 788, 869, 985, 1006, 1347
Hpy8I	GTNNAC	8 cut(s)	142, 227, 375, 788, 869, 985, 1006, 1347
Hpy99I	CGWCG	4 cut(s)	167, 248, 1463, 2144
HpyAV	CCTTC	7 cut(s)	17, 250, 512, 616, 1849, 2103, 2243
HpyCH4III	ACNGT	4 cut(s)	167, 301, 438, 1344
HpyCH4IV	ACGT	6 cut(s)	229, 246, 377, 1550, 1984, 2125
HpyF10VI	GCNNNNNNNGC	8 cut(s)	1049, 1097, 1226, 1286, 1298, 1998, 2539, 2548
HpySE526I	ACGT	6 cut(s)	229, 246, 377, 1550, 1984, 2125
HspAI	GCGC	1 cut(s)	254
Ksp22I	TGATCA	2 cut(s)	963, 2290
LmnI	GCTCC	3 cut(s)	277, 431, 1825
Lsp1109I	GCAGC	3 cut(s)	1177, 1301, 2086
LweI	GCATC	5 cut(s)	86, 214, 1207, 2538, 2551
MaeI	CTAG	7 cut(s)	443, 710, 899, 1221, 1517, 1544, 2184
MaeII	ACGT	6 cut(s)	229, 246, 377, 1550, 1984, 2125
MaeIII	GTNAC	3 cut(s)	438, 751, 1546
MboII	GAAGA	7 cut(s)	50, 431, 703, 1012, 1969, 2180, 2402
MhlI	GDGCHC	3 cut(s)	274, 436, 1822
MlsI	TGGCCA	2 cut(s)	1264, 1878
MluNI	TGGCCA	2 cut(s)	1264, 1878
MlyI	GAGTC	5 cut(s)	104, 168, 2153, 2196, 2321
MmeI	TCCRAC	1 cut(s)	778
Mox20I	TGGCCA	2 cut(s)	1264, 1878
Mph1103I	ATGCAT	1 cut(s)	1501
MroXI	GAANNNNTTC	1 cut(s)	2443
MscI	TGGCCA	2 cut(s)	1264, 1878
MseI	TTAA	8 cut(s)	477, 545, 683, 792, 1338, 1553, 1781, 2255
MslI	CAYNNNNRTG	4 cut(s)	1144, 1215, 1330, 2273
Msp20I	TGGCCA	2 cut(s)	1264, 1878
MspA1I	CMGCKG	1 cut(s)	779
MspCI	CTTAAG	1 cut(s)	791
MspI	CCGG	2 cut(s)	1865, 1943
MspR9I	CCNGG	9 cut(s)	267, 1248, 1454, 1805, 1824, 1943, 2026, 2178, 2357
Mva1269I	GAATGC	3 cut(s)	992, 1065, 1256
MvaI	CCWGG	8 cut(s)	267, 1248, 1454, 1805, 1824, 2026, 2178, 2357
MwoI	GCNNNNNNNGC	8 cut(s)	1049, 1097, 1226, 1286, 1298, 1998, 2539, 2548
NciI	CCSGG	1 cut(s)	1943
NcoI	CCATGG	3 cut(s)	81, 729, 1911
NdeI	CATATG	1 cut(s)	1501
NlaIV	GGNNCC	9 cut(s)	361, 468, 526, 627, 1436, 1947, 1973, 2200, 2229
NmuCI	GTSAC	2 cut(s)	438, 1546
NsiI	ATGCAT	1 cut(s)	1501
NspI	RCATGY	1 cut(s)	2215
PaeR7I	CTCGAG	2 cut(s)	671, 2093
PcsI	WCGNNNNNNNCGW	4 cut(s)	141, 214, 2091, 2421
PctI	GAATGC	3 cut(s)	992, 1065, 1256
PdmI	GAANNNNTTC	1 cut(s)	2443
PfeI	GAWTC	9 cut(s)	86, 125, 159, 179, 236, 1207, 2153, 2393, 2444
PflMI	CCANNNNNTGG	1 cut(s)	1912
PkrI	GCNGC	3 cut(s)	1192, 1291, 2076
PleI	GAGTC	5 cut(s)	103, 168, 2153, 2195, 2321
PmaCI	CACGTG	1 cut(s)	230
PmlI	CACGTG	1 cut(s)	230
PpsI	GAGTC	5 cut(s)	103, 168, 2153, 2195, 2321
Ppu21I	YACGTR	1 cut(s)	230
PpuMI	RGGWCCY	2 cut(s)	525, 908
PshBI	ATTAAT	2 cut(s)	545, 683
PsiI	TTATAA	1 cut(s)	2037
Psp124BI	GAGCTC	1 cut(s)	1822
Psp1406I	AACGTT	1 cut(s)	2125
Psp5II	RGGWCCY	2 cut(s)	525, 908
Psp6I	CCWGG	8 cut(s)	265, 1246, 1452, 1803, 1822, 2024, 2176, 2355
PspCI	CACGTG	1 cut(s)	230
PspGI	CCWGG	8 cut(s)	265, 1246, 1452, 1803, 1822, 2024, 2176, 2355
PspN4I	GGNNCC	9 cut(s)	361, 468, 526, 627, 1436, 1947, 1973, 2200, 2229
PspPI	GGNCC	6 cut(s)	224, 466, 525, 908, 1405, 2198
PspPPI	RGGWCCY	2 cut(s)	525, 908
PsrI	GAACNNNNNNTAC	2 cut(s)	10, 42
PstI	CTGCAG	1 cut(s)	2507
PstNI	CAGNNNCTG	2 cut(s)	1253, 2080
PvuII	CAGCTG	1 cut(s)	779
RsaI	GTAC	7 cut(s)	169, 220, 1841, 1863, 1956, 2216, 2246
RsaNI	GTAC	7 cut(s)	168, 219, 1840, 1862, 1955, 2215, 2245
RseI	CAYNNNNRTG	4 cut(s)	1144, 1215, 1330, 2273
SacI	GAGCTC	1 cut(s)	1822
SaqAI	TTAA	8 cut(s)	477, 545, 683, 792, 1338, 1553, 1781, 2255
SatI	GCNGC	3 cut(s)	1191, 1290, 2075
Sau96I	GGNCC	6 cut(s)	224, 466, 525, 908, 1405, 2198
SchI	GAGTC	5 cut(s)	104, 168, 2153, 2196, 2321
ScrFI	CCNGG	9 cut(s)	267, 1248, 1454, 1805, 1824, 1943, 2026, 2178, 2357
SduI	GDGCHC	3 cut(s)	274, 436, 1822
SfaNI	GCATC	5 cut(s)	86, 214, 1207, 2538, 2551
SfcI	CTRYAG	2 cut(s)	1077, 2503
Sfr274I	CTCGAG	2 cut(s)	671, 2093
SinI	GGWCC	4 cut(s)	224, 466, 525, 908
SlaI	CTCGAG	2 cut(s)	671, 2093
SmiMI	CAYNNNNRTG	4 cut(s)	1144, 1215, 1330, 2273
SmlI	CTYRAG	5 cut(s)	641, 671, 791, 1474, 2093
SmoI	CTYRAG	5 cut(s)	641, 671, 791, 1474, 2093
SpeI	ACTAGT	2 cut(s)	442, 898
SsiI	CCGC	2 cut(s)	5, 1214
SspI	AATATT	2 cut(s)	1680, 1872
SspMI	CTAG	7 cut(s)	443, 710, 899, 1221, 1517, 1544, 2184
SstI	GAGCTC	1 cut(s)	1822
StyD4I	CCNGG	9 cut(s)	265, 1246, 1452, 1803, 1822, 1941, 2024, 2176, 2355
StyI	CCWWGG	4 cut(s)	81, 729, 1911, 2130
TaaI	ACNGT	4 cut(s)	167, 301, 438, 1344
TaiI	ACGT	6 cut(s)	232, 249, 380, 1553, 1987, 2128
TatI	WGTACW	3 cut(s)	1839, 2214, 2244
TfiI	GAWTC	9 cut(s)	86, 125, 159, 179, 236, 1207, 2153, 2393, 2444
Tru1I	TTAA	8 cut(s)	477, 545, 683, 792, 1338, 1553, 1781, 2255
Tru9I	TTAA	8 cut(s)	477, 545, 683, 792, 1338, 1553, 1781, 2255
TscAI	CASTG	3 cut(s)	388, 441, 985
TseFI	GTSAC	2 cut(s)	438, 1546
TseI	GCWGC	3 cut(s)	1190, 1289, 2074
Tsp45I	GTSAC	2 cut(s)	438, 1546
TspGWI	ACGGA	3 cut(s)	206, 2003, 2220
TspRI	CASTG	3 cut(s)	388, 441, 985
Van91I	CCANNNNNTGG	1 cut(s)	1912
Vha464I	CTTAAG	1 cut(s)	791
VpaK11BI	GGWCC	4 cut(s)	224, 466, 525, 908
VspI	ATTAAT	2 cut(s)	545, 683
XapI	RAATTY	8 cut(s)	603, 676, 696, 951, 1030, 1397, 2099, 2521
XbaI	TCTAGA	1 cut(s)	2183
XceI	RCATGY	1 cut(s)	2215
XhoI	CTCGAG	2 cut(s)	671, 2093
XmiI	GTMKAC	2 cut(s)	374, 868
XmnI	GAANNNNTTC	1 cut(s)	2443
XspI	CTAG	7 cut(s)	443, 710, 899, 1221, 1517, 1544, 2184
Zsp2I	ATGCAT	1 cut(s)	1501

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.