Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0007989

Physical Location & Seq

Genomic Coordinates Reverse (-)

4287386 .. 4295120

Gene Structure 7735 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g03750.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2505 bp

ATGGACTCCATCGAGTCGCGGTGGGTCTTTCAGGACGAGGACGACTCCGACCTCGACGACGACGATGCAGAGGCACATGCGATGCATCGGACGGTTGTGGATTCGGAGGATGATGAAGAGGAGGACGATAATGCCGATCAGCGATTGATTCGCACTGGCCCTCGCGTCGATTCCTTTGACGTAGAAGCGCTCGAGGTCCCCGGCGCTCTCCGAAACGAATACGAGGATTTCAGTCTCGGAAGGAAAATAATAATTGCTTTTCAGACCCTTGGAGTTGTCTTTGGTGATGTTGGAACAAGTCCATTATATACATTCAGTGTCATGTTTAAAAAGGCACCTATTAATGGAAATGAGGATGTTATTGGAGCAATGTCATTAGTCCTGTACACGTTAATCTTGATCCCCTTGCTTAAGTATGTGCTGGTGGTTCTTTGGGCAAATGATGATGGTGAAGGTGGTACATTTGCTTTGTATTCATTGATCTATCGACATGCTAAGGTCAGTCTTCTTCCGAATCAGCTTCCGTCAGATGCCCGGATATCAAGCTTCAGGCTAAAGGTGCCATCTCCTGAACTTGAGAGATCTTTAAAAATCAAGGAAAGGCTTGAGGCTTCACTGACTCTGAAAAAGCTTCTTCTGACGTTAGTTCTTGCTGGTACTGCAATGGTGATAGCTGATGGGGTTGTTACACCAGCAATGTCAGTAGTATCCGCTGTTGGTGGTCTAACGGTTGGAGTCGAGGCAATTAAGCAAGATCAAGTGGTGATGATTTCAGTTGCCTTTCTTGTTATTTTATTCAGTGTACAGAAATTTGGGACAAGTAAAGTTGGACTGGCTGTAGGCCCTGCCTTATTCATATGGTTTTGTTCCCTTGGGGGCATTGGGATTTACAACCTTGTTAAATATGACAGCAGTGTCTTTAAGGCATTCAATCCTATTCACATATATTACTTCTTCAAGAGGAACTCCACTAAGGCTTGGTATTCCCTTGGGGGTTGTATTTTATGCGCAACAGGTTCCGAGGCAATGTTTGCGGATCTTTGTTACTTTTCCGTGCGATCAGTCCAGCTTACGTTCGTTTTTCTTGTTTTGCCCTGCCTTATGTTGGGTTATTTGGGTCAAGCTGCATACCTTATGGAGAACCCAGATGAAGCTGAGCTAGCTTTCTTTTCTTCAATCCCAAGTGGTTTTTTCTGGCCTATGCTCCTCGTTGCTAACATTGCCGCATTGATTGCTAGTCGTGCAATGACAACAGCCACTTTTTCATGCATCAAACAATCAATGGCACTTGGTTGTTTCCCTCGCCTTAAAATCATACATACCTCTAGGAAGTTCATGGGGCAAATTTATATCCCTGTCGTAAATTGGTTTTTGCTGGTGGTTTGCCTGGTGTCTATCTGCACTATTTCAAACGTTGATGAGATTGGAAATGCATATGGCATTGCTGAGCTAGGAGTGATGATGATGACGACCATTTTAGTAACAATTGTTATGCTTCTTATATGGCAGATAAACATTATCATCGTGCTGAGTTTCTTAATAATTTTCCTGGGGTTGGAGTTGACCTTTTTCTCATCAGTTTTGTGGAGTGTGGGAGATGGAAGTTGGATAATTTTGGTATTTGCCATAATTATGTTTTTGATAATGTCTATCTGGAACTATGGAAGCAAGCTTAAGTATGAAACTGAAGTCAAGCAAAAGCTGTCAATGGATTTGATGCGGCAATTGGGTCCCAATCTTGGGACAATAAGAGCTCCAGGCATTGGTTTGCTTTATAATGAGCTGGTGAAGGGAATTCCAGCAATTCTTGGCCATTTTCTGACCACACTTCCCGCAATCCACTCGATGATCATATTTGTTTGTATAAAGTATGTTCCAGTTCCTGTAGTACCTCAAAGTGAAAGGTTCCTTTTCCGGCGTGTCTGCCCAAAAAACTTCCACATATTTCGTTGTATTGCCAGGTACGGCTATAAGGATGTTCGTAAAGAAAATCACCAAACATTTGAACAGCTACTAATTGAGAGCCTTGAGAAATTCATACGTAGGGAGGCTCAGGAGCGGTCACTAGAGAGTGATGGGGATGATGGTGATACAGACTCAGAGGATGAGTCCTCTTGCTCAAGGGTTCTTATAGCACCCAATGGAAGTGTTTACTCACTTGGCATTCCTCTCCTGGCTGAGTTCAAGGAGACGAGACAGCAGCCTACATCAGAAGCAAGCACATCAGAGGAGGTGACGCCAGTGTTTCCAACAGATCCAACAATTTCTGATTCTGAGCAGAGTATTGATAGGGAACTATCGTTTATACGGAAGGCCAAGGAATCGGGGGTTGTTTATCTTCTTGGTCATGGTGATATTAGGGCGAGGAAAGATTCATGGTTCATTAAGAAGTTAATCATCAATTACTTTTATGCCTTCTTGAGGAAAAATTGCAGGAGGGGCACTGCGAATTTGAGCGTGCCCCATTCGCATCTAATGCAGGTTGGGATGACATATATGGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0004016 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008150 GO:0008324 GO:0009975 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015318 GO:0015672 GO:0016020 GO:0016829 GO:0016849 GO:0022857 GO:0022890 GO:0030001 GO:0031090 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0071804 GO:0071805 GO:0071944 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

K_trans

Protein Analysis

835

Amino Acids

93.14

Weight (kDa)

5.45

Isoelectric Point (pI)

39.04

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007989)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33530 AT4G33530 AT5G09400
fragaria_vesca	FvH4_2g11940 FvH4_2g11940 FvH4_2g11940 FvH4_2g11940
malus_domestica	MD05G1045000.v1.1 MD10G1051900.v1.1
prunus_persica	Prupe.8G060500_v2.0.a1 Prupe.8G060500_v2.0.a1 Prupe.8G060500_v2.0.a1
pyrus_communis	pycom05g03750 pycom10g03670
rosa_chinensis	RchiOBHm_Chr6g0271831
rosa_laevigata	RLG00000013711
rosa_multiflora	Rmu_sc0002396.1_g000028
rosa_roxburghii	Rroxscaffold_173G00434990 Rroxscaffold_7G00196740
rosa_rugosa	Rorug06G0063500
rosa_samantha	Rh6AG181700 Rh6BG185800 Rh6CG182300
rosa_wichuraiana	Rw6G015650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1776
AasI	GACNNNNNNGTC	1 cut(s)	914
Acc16I	TGCGCA	1 cut(s)	1009
Acc36I	ACCTGC	1 cut(s)	2470
AccB1I	GGYRCC	2 cut(s)	334, 559
AccB7I	CCANNNNNTGG	1 cut(s)	1763
AccBSI	CCGCTC	1 cut(s)	2059
AccII	CGCG	2 cut(s)	19, 165
AciI	CCGC	7 cut(s)	19, 711, 1034, 1224, 1720, 1833, 2059
AclI	AACGTT	1 cut(s)	1413
AclWI	GGATC	3 cut(s)	394, 1044, 2249
AcoI	YGGCCR	1 cut(s)	1810
AcsI	RAATTY	5 cut(s)	809, 1344, 1794, 2033, 2449
AcuI	CTGAAG	2 cut(s)	532, 1707
AcyI	GRCGYC	1 cut(s)	2237
AfaI	GTAC	6 cut(s)	386, 460, 658, 804, 1890, 1964
AfeI	AGCGCT	1 cut(s)	189
AfiI	CCNNNNNNNGG	7 cut(s)	344, 1105, 1555, 1739, 1740, 1763, 2421
AflII	CTTAAG	2 cut(s)	410, 1673
AflIII	ACRYGT	1 cut(s)	387
AgsI	TTSAA	6 cut(s)	931, 958, 1176, 1410, 2006, 2185
AjnI	CCWGG	5 cut(s)	1386, 1548, 1756, 1958, 2172
Alw21I	GWGCWC	1 cut(s)	1756
Alw26I	GTCTC	3 cut(s)	239, 2183, 2188
AlwI	GGATC	3 cut(s)	394, 1044, 2249
AlwNI	CAGNNNCTG	1 cut(s)	1883
Ama87I	CYCGRG	1 cut(s)	191
Aor51HI	AGCGCT	1 cut(s)	189
AoxI	GGCC	5 cut(s)	157, 841, 1196, 1810, 2313
ApeKI	GCWGC	2 cut(s)	1124, 2200
ApoI	RAATTY	5 cut(s)	809, 1344, 1794, 2033, 2449
AseI	ATTAAT	1 cut(s)	342
AspLEI	GCGC	3 cut(s)	190, 206, 1010
AspS9I	GGNCC	4 cut(s)	158, 196, 842, 1730
AsuC2I	CCSGG	2 cut(s)	201, 535
AsuHPI	GGTGA	9 cut(s)	296, 461, 679, 775, 1798, 1985, 2099, 2245, 2363
AsuNHI	GCTAGC	1 cut(s)	1159
AvaI	CYCGRG	1 cut(s)	191
AvaII	GGWCC	2 cut(s)	196, 1730
BaeGI	GKGCMC	2 cut(s)	2444, 2463
BalI	TGGCCA	1 cut(s)	1812
BanI	GGYRCC	2 cut(s)	334, 559
BanII	GRGCYC	1 cut(s)	1756
BbsI	GAAGAC	1 cut(s)	497
Bbv12I	GWGCWC	1 cut(s)	1756
BbvI	GCAGC	2 cut(s)	1111, 2212
BccI	CCATC	7 cut(s)	17, 440, 571, 671, 1592, 2069, 2078
BceAI	ACGGC	1 cut(s)	1981
BcgI	CGANNNNNNTGC	4 cut(s)	47, 81, 1824, 1858
BciT130I	CCWGG	5 cut(s)	1388, 1550, 1758, 1960, 2174
BciVI	GTATCC	1 cut(s)	718
BclI	TGATCA	1 cut(s)	1848
BcnI	CCSGG	2 cut(s)	201, 535
BcoDI	GTCTC	3 cut(s)	239, 2183, 2188
BfaI	CTAG	5 cut(s)	1160, 1236, 1326, 1451, 2066
BfmI	CTRYAG	2 cut(s)	837, 1884
BfoI	RGCGCY	2 cut(s)	191, 207
BfrI	CTTAAG	2 cut(s)	410, 1673
BfuAI	ACCTGC	1 cut(s)	2470
BfuI	GTATCC	1 cut(s)	718
BglII	AGATCT	1 cut(s)	581
BisI	GCNGC	4 cut(s)	1125, 1224, 1721, 2201
BlpI	GCTNAGC	2 cut(s)	1155, 1446
BlsI	GCNGC	4 cut(s)	1126, 1225, 1722, 2202
Bme1390I	CCNGG	7 cut(s)	201, 535, 1388, 1550, 1758, 1960, 2174
Bme18I	GGWCC	2 cut(s)	196, 1730
BmeT110I	CYCGRG	1 cut(s)	191
BmgT120I	GGNCC	4 cut(s)	158, 196, 842, 1730
BmiI	GGNNCC	7 cut(s)	198, 336, 561, 1018, 1731, 1732, 1907
BmrFI	CCNGG	7 cut(s)	201, 535, 1388, 1550, 1758, 1960, 2174
BmsI	GCATC	7 cut(s)	55, 72, 94, 520, 1278, 1707, 2479
BmtI	GCTAGC	1 cut(s)	1163
BpiI	GAAGAC	1 cut(s)	497
BplI	GAGNNNNNCTC	2 cut(s)	29, 61
BpmI	CTGGAG	1 cut(s)	1740
Bpu10I	CCTNAGC	2 cut(s)	495, 2052
Bpu1102I	GCTNAGC	2 cut(s)	1155, 1446
BpuEI	CTTGAG	5 cut(s)	596, 626, 2048, 2104, 2440
BpuMI	CCSGG	2 cut(s)	201, 535
BsaAI	YACGTR	1 cut(s)	2042
BsaHI	GRCGYC	1 cut(s)	2237
BsaJI	CCNNGG	7 cut(s)	199, 268, 871, 988, 1020, 1549, 2316
Bsc4I	CCNNNNNNNGG	7 cut(s)	344, 1105, 1555, 1739, 1740, 1763, 2421
Bse1I	ACTGG	4 cut(s)	160, 837, 1877, 2240
Bse3DI	GCAATG	7 cut(s)	375, 669, 702, 1032, 1218, 1251, 1440
BseBI	CCWGG	5 cut(s)	1388, 1550, 1758, 1960, 2174
BseDI	CCNNGG	7 cut(s)	199, 268, 871, 988, 1020, 1549, 2316
BseGI	GGATG	6 cut(s)	115, 361, 1981, 2086, 2110, 2493
BseLI	CCNNNNNNNGG	7 cut(s)	344, 1105, 1555, 1739, 1740, 1763, 2421
BseMI	GCAATG	7 cut(s)	375, 669, 702, 1032, 1218, 1251, 1440
BseMII	CTCAG	7 cut(s)	1146, 1437, 1520, 2066, 2112, 2169, 2265
BseNI	ACTGG	4 cut(s)	160, 837, 1877, 2240
BseRI	GAGGAG	3 cut(s)	134, 1196, 2243
BseSI	GKGCMC	2 cut(s)	2444, 2463
BseXI	GCAGC	2 cut(s)	1111, 2212
BsgI	GTGCAG	1 cut(s)	1384
Bsh1236I	CGCG	2 cut(s)	19, 165
BshFI	GGCC	5 cut(s)	159, 843, 1198, 1812, 2315
BshNI	GGYRCC	2 cut(s)	334, 559
BsiHKAI	GWGCWC	1 cut(s)	1756
BsiHKCI	CYCGRG	1 cut(s)	191
BsiSI	CCGG	3 cut(s)	201, 535, 1915
BslFI	GGGAC	4 cut(s)	182, 829, 1716, 1756
BslI	CCNNNNNNNGG	7 cut(s)	344, 1105, 1555, 1739, 1740, 1763, 2421
BsmAI	GTCTC	3 cut(s)	239, 2183, 2188
BsmBI	CGTCTC	1 cut(s)	2183
BsmFI	GGGAC	4 cut(s)	182, 829, 1716, 1756
BsmI	GAATGC	2 cut(s)	926, 2163
BsnI	GGCC	5 cut(s)	159, 843, 1198, 1812, 2315
BsoBI	CYCGRG	1 cut(s)	191
Bsp1286I	GDGCHC	3 cut(s)	1756, 2444, 2463
Bsp1407I	TGTACA	2 cut(s)	384, 802
Bsp143I	GATC	9 cut(s)	136, 399, 480, 581, 754, 1036, 1058, 1848, 2254
Bsp1720I	GCTNAGC	2 cut(s)	1155, 1446
BspACI	CCGC	7 cut(s)	19, 711, 1034, 1224, 1720, 1833, 2059
BspANI	GGCC	5 cut(s)	159, 843, 1198, 1812, 2315
BspCNI	CTCAG	7 cut(s)	1147, 1438, 1521, 2065, 2111, 2170, 2266
BspFNI	CGCG	2 cut(s)	19, 165
BspLI	GGNNCC	7 cut(s)	198, 336, 561, 1018, 1731, 1732, 1907
BspMI	ACCTGC	1 cut(s)	2470
BspOI	GCTAGC	1 cut(s)	1163
BspPI	GGATC	3 cut(s)	394, 1044, 2249
BspT107I	GGYRCC	2 cut(s)	334, 559
BspTI	CTTAAG	2 cut(s)	410, 1673
BsrBI	CCGCTC	1 cut(s)	2059
BsrDI	GCAATG	7 cut(s)	375, 669, 702, 1032, 1218, 1251, 1440
BsrGI	TGTACA	2 cut(s)	384, 802
BsrI	ACTGG	4 cut(s)	160, 837, 1877, 2240
BssECI	CCNNGG	7 cut(s)	199, 268, 871, 988, 1020, 1549, 2316
BssMI	GATC	9 cut(s)	136, 399, 480, 581, 754, 1036, 1058, 1848, 2254
BssNI	GRCGYC	1 cut(s)	2237
BssT1I	CCWWGG	4 cut(s)	268, 871, 988, 2316
Bst2UI	CCWGG	5 cut(s)	1388, 1550, 1758, 1960, 2174
Bst4CI	ACNGT	2 cut(s)	94, 730
Bst6I	CTCTTC	1 cut(s)	111
BstACI	GRCGYC	1 cut(s)	2237
BstAFI	CTTAAG	2 cut(s)	410, 1673
BstAPI	GCANNNNNTGC	3 cut(s)	1031, 1232, 2476
BstAUI	TGTACA	2 cut(s)	384, 802
BstBAI	YACGTR	1 cut(s)	2042
BstC8I	GCNNGC	4 cut(s)	1161, 1670, 2218, 2459
BstDEI	CTNAG	9 cut(s)	495, 972, 1155, 1446, 1529, 2052, 2098, 2178, 2274
BstENI	CCTNNNNNAGG	1 cut(s)	2419
BstF5I	GGATG	6 cut(s)	115, 361, 1981, 2086, 2110, 2493
BstFNI	CGCG	2 cut(s)	19, 165
BstH2I	RGCGCY	2 cut(s)	191, 207
BstHHI	GCGC	3 cut(s)	190, 206, 1010
BstKTI	GATC	9 cut(s)	139, 402, 483, 584, 757, 1039, 1061, 1851, 2257
BstMAI	GTCTC	3 cut(s)	239, 2183, 2188
BstMBI	GATC	9 cut(s)	136, 399, 480, 581, 754, 1036, 1058, 1848, 2254
BstNI	CCWGG	5 cut(s)	1388, 1550, 1758, 1960, 2174
BstNSI	RCATGY	2 cut(s)	80, 494
BstSCI	CCNGG	7 cut(s)	199, 533, 1386, 1548, 1756, 1958, 2172
BstSFI	CTRYAG	2 cut(s)	837, 1884
BstSLI	GKGCMC	2 cut(s)	2444, 2463
BstSNI	TACGTA	1 cut(s)	2042
BstUI	CGCG	2 cut(s)	19, 165
BstV1I	GCAGC	2 cut(s)	1111, 2212
BstV2I	GAAGAC	1 cut(s)	497
BstX2I	RGATCY	3 cut(s)	581, 1036, 2254
BstYI	RGATCY	3 cut(s)	581, 1036, 2254
BsuI	GTATCC	1 cut(s)	718
BsuRI	GGCC	5 cut(s)	159, 843, 1198, 1812, 2315
BtgZI	GCGATG	1 cut(s)	95
BtsCI	GGATG	6 cut(s)	115, 361, 1981, 2086, 2110, 2493
BtsI	GCAGTG	2 cut(s)	919, 2442
BtsIMutI	CAGTG	7 cut(s)	153, 322, 614, 805, 919, 2247, 2442
BveI	ACCTGC	1 cut(s)	2470
Cac8I	GCNNGC	4 cut(s)	1161, 1670, 2218, 2459
CaiI	CAGNNNCTG	1 cut(s)	1883
CfoI	GCGC	3 cut(s)	190, 206, 1010
Cfr13I	GGNCC	4 cut(s)	158, 196, 842, 1730
CseI	GACGC	2 cut(s)	154, 2245
Csp6I	GTAC	6 cut(s)	385, 459, 657, 803, 1889, 1963
CviAII	CATG	7 cut(s)	77, 322, 491, 1266, 1336, 2348, 2376
CviQI	GTAC	6 cut(s)	385, 459, 657, 803, 1889, 1963
DdeI	CTNAG	9 cut(s)	495, 972, 1155, 1446, 1529, 2052, 2098, 2178, 2274
DpnI	GATC	9 cut(s)	138, 401, 482, 583, 756, 1038, 1060, 1850, 2256
DpnII	GATC	9 cut(s)	136, 399, 480, 581, 754, 1036, 1058, 1848, 2254
DraI	TTTAAA	2 cut(s)	328, 588
DrdI	GACNNNNNNGTC	1 cut(s)	914
DseDI	GACNNNNNNGTC	1 cut(s)	914
EaeI	YGGCCR	1 cut(s)	1810
Eam1104I	CTCTTC	1 cut(s)	111
EarI	CTCTTC	1 cut(s)	111
Ecl136II	GAGCTC	1 cut(s)	1754
Eco105I	TACGTA	1 cut(s)	2042
Eco130I	CCWWGG	4 cut(s)	268, 871, 988, 2316
Eco24I	GRGCYC	1 cut(s)	1756
Eco32I	GATATC	1 cut(s)	540
Eco47I	GGWCC	2 cut(s)	196, 1730
Eco47III	AGCGCT	1 cut(s)	189
Eco53kI	GAGCTC	1 cut(s)	1754
Eco57I	CTGAAG	2 cut(s)	532, 1707
Eco88I	CYCGRG	1 cut(s)	191
EcoICRI	GAGCTC	1 cut(s)	1754
EcoNI	CCTNNNNNAGG	1 cut(s)	2419
EcoO109I	RGGNCCY	3 cut(s)	196, 842, 1730
EcoRI	GAATTC	1 cut(s)	1794
EcoRII	CCWGG	5 cut(s)	1386, 1548, 1756, 1958, 2172
EcoRV	GATATC	1 cut(s)	540
EcoT14I	CCWWGG	4 cut(s)	268, 871, 988, 2316
EcoT22I	ATGCAT	3 cut(s)	87, 1271, 1435
EcoT38I	GRGCYC	1 cut(s)	1756
ErhI	CCWWGG	4 cut(s)	268, 871, 988, 2316
Esp3I	CGTCTC	1 cut(s)	2183
FaeI	CATG	7 cut(s)	80, 325, 494, 1269, 1339, 2351, 2379
FaqI	GGGAC	4 cut(s)	182, 829, 1716, 1756
FatI	CATG	7 cut(s)	76, 321, 490, 1265, 1335, 2347, 2375
FauI	CCCGC	1 cut(s)	1840
FauNDI	CATATG	2 cut(s)	857, 1435
FbaI	TGATCA	1 cut(s)	1848
Fnu4HI	GCNGC	4 cut(s)	1125, 1224, 1721, 2201
FokI	GGATG	6 cut(s)	122, 368, 1988, 2093, 2117, 2500
FriOI	GRGCYC	1 cut(s)	1756
Fsp4HI	GCNGC	4 cut(s)	1125, 1224, 1721, 2201
FspBI	CTAG	5 cut(s)	1160, 1236, 1326, 1451, 2066
FspI	TGCGCA	1 cut(s)	1009
GlaI	GCGC	3 cut(s)	189, 205, 1009
GluI	GCNGC	4 cut(s)	1125, 1224, 1721, 2201
GsuI	CTGGAG	1 cut(s)	1740
HaeII	RGCGCY	2 cut(s)	191, 207
HaeIII	GGCC	5 cut(s)	159, 843, 1198, 1812, 2315
HapII	CCGG	3 cut(s)	201, 535, 1915
HgaI	GACGC	2 cut(s)	154, 2245
HhaI	GCGC	3 cut(s)	190, 206, 1010
Hin1I	GRCGYC	1 cut(s)	2237
Hin1II	CATG	7 cut(s)	80, 325, 494, 1269, 1339, 2351, 2379
Hin6I	GCGC	3 cut(s)	188, 204, 1008
HinP1I	GCGC	3 cut(s)	188, 204, 1008
HincII	GTYRAC	1 cut(s)	1563
HindII	GTYRAC	1 cut(s)	1563
HindIII	AAGCTT	3 cut(s)	544, 629, 1670
HpaII	CCGG	3 cut(s)	201, 535, 1915
HphI	GGTGA	9 cut(s)	296, 461, 679, 775, 1798, 1985, 2099, 2245, 2363
Hpy166II	GTNNAC	4 cut(s)	387, 803, 1563, 2152
Hpy188III	TCNNGA	7 cut(s)	32, 397, 569, 958, 1654, 2054, 2419
Hpy8I	GTNNAC	4 cut(s)	387, 803, 1563, 2152
Hpy99I	CGWCG	4 cut(s)	59, 62, 65, 170
HpyAV	CCTTC	5 cut(s)	234, 446, 1783, 2305, 2425
HpyCH4III	ACNGT	2 cut(s)	94, 730
HpyCH4IV	ACGT	6 cut(s)	180, 389, 641, 1073, 1413, 2041
HpyF3I	CTNAG	9 cut(s)	495, 972, 1155, 1446, 1529, 2052, 2098, 2178, 2274
HpySE526I	ACGT	6 cut(s)	180, 389, 641, 1073, 1413, 2041
Hsp92I	GRCGYC	1 cut(s)	2237
Hsp92II	CATG	7 cut(s)	80, 325, 494, 1269, 1339, 2351, 2379
HspAI	GCGC	3 cut(s)	188, 204, 1008
KflI	GGGWCCC	1 cut(s)	1730
Ksp22I	TGATCA	1 cut(s)	1848
Kzo9I	GATC	9 cut(s)	136, 399, 480, 581, 754, 1036, 1058, 1848, 2254
LmnI	GCTCC	4 cut(s)	365, 1209, 1759, 2056
Lsp1109I	GCAGC	2 cut(s)	1111, 2212
LweI	GCATC	7 cut(s)	55, 72, 94, 520, 1278, 1707, 2479
MaeI	CTAG	5 cut(s)	1160, 1236, 1326, 1451, 2066
MaeII	ACGT	6 cut(s)	180, 389, 641, 1073, 1413, 2041
MaeIII	GTNAC	5 cut(s)	685, 1043, 1480, 2061, 2233
MalI	GATC	9 cut(s)	138, 401, 482, 583, 756, 1038, 1060, 1850, 2256
MbiI	CCGCTC	1 cut(s)	2059
MboI	GATC	9 cut(s)	136, 399, 480, 581, 754, 1036, 1058, 1848, 2254
MboII	GAAGA	7 cut(s)	128, 497, 500, 626, 946, 1164, 2330
MfeI	CAATTG	2 cut(s)	1485, 1724
MflI	RGATCY	3 cut(s)	581, 1036, 2254
MhlI	GDGCHC	3 cut(s)	1756, 2444, 2463
MlsI	TGGCCA	1 cut(s)	1812
MluNI	TGGCCA	1 cut(s)	1812
MlyI	GAGTC	6 cut(s)	23, 38, 613, 744, 2090, 2117
MmeI	TCCRAC	8 cut(s)	72, 271, 712, 808, 1536, 1586, 2273, 2282
Mox20I	TGGCCA	1 cut(s)	1812
Mph1103I	ATGCAT	3 cut(s)	87, 1271, 1435
MscI	TGGCCA	1 cut(s)	1812
MslI	CAYNNNNRTG	1 cut(s)	1631
Msp20I	TGGCCA	1 cut(s)	1812
MspA1I	CMGCKG	1 cut(s)	713
MspCI	CTTAAG	2 cut(s)	410, 1673
MspI	CCGG	3 cut(s)	201, 535, 1915
MspR9I	CCNGG	7 cut(s)	201, 535, 1388, 1550, 1758, 1960, 2174
MunI	CAATTG	2 cut(s)	1485, 1724
Mva1269I	GAATGC	2 cut(s)	926, 2163
MvaI	CCWGG	5 cut(s)	1388, 1550, 1758, 1960, 2174
MvnI	CGCG	2 cut(s)	19, 165
NciI	CCSGG	2 cut(s)	201, 535
NdeI	CATATG	2 cut(s)	857, 1435
NdeII	GATC	9 cut(s)	136, 399, 480, 581, 754, 1036, 1058, 1848, 2254
NheI	GCTAGC	1 cut(s)	1159
NlaIII	CATG	7 cut(s)	80, 325, 494, 1269, 1339, 2351, 2379
NlaIV	GGNNCC	7 cut(s)	198, 336, 561, 1018, 1731, 1732, 1907
NmuCI	GTSAC	2 cut(s)	2061, 2233
NsbI	TGCGCA	1 cut(s)	1009
NsiI	ATGCAT	3 cut(s)	87, 1271, 1435
NspI	RCATGY	2 cut(s)	80, 494
PaeR7I	CTCGAG	1 cut(s)	191
PcsI	WCGNNNNNNNCGW	2 cut(s)	60, 132
PctI	GAATGC	2 cut(s)	926, 2163
PfeI	GAWTC	7 cut(s)	101, 148, 170, 514, 2270, 2321, 2372
PflMI	CCANNNNNTGG	1 cut(s)	1763
PkrI	GCNGC	4 cut(s)	1126, 1225, 1722, 2202
PleI	GAGTC	6 cut(s)	22, 38, 613, 743, 2090, 2116
PpsI	GAGTC	6 cut(s)	22, 38, 613, 743, 2090, 2116
Ppu21I	YACGTR	1 cut(s)	2042
PpuMI	RGGWCCY	2 cut(s)	196, 1730
PshBI	ATTAAT	1 cut(s)	342
PsiI	TTATAA	1 cut(s)	1776
Psp124BI	GAGCTC	1 cut(s)	1756
Psp1406I	AACGTT	1 cut(s)	1413
Psp5II	RGGWCCY	2 cut(s)	196, 1730
Psp6I	CCWGG	5 cut(s)	1386, 1548, 1756, 1958, 2172
PspGI	CCWGG	5 cut(s)	1386, 1548, 1756, 1958, 2172
PspN4I	GGNNCC	7 cut(s)	198, 336, 561, 1018, 1731, 1732, 1907
PspPI	GGNCC	4 cut(s)	158, 196, 842, 1730
PspPPI	RGGWCCY	2 cut(s)	196, 1730
PspXI	VCTCGAGB	1 cut(s)	191
PstNI	CAGNNNCTG	1 cut(s)	1883
PsuI	RGATCY	3 cut(s)	581, 1036, 2254
RsaI	GTAC	6 cut(s)	386, 460, 658, 804, 1890, 1964
RsaNI	GTAC	6 cut(s)	385, 459, 657, 803, 1889, 1963
RseI	CAYNNNNRTG	1 cut(s)	1631
SacI	GAGCTC	1 cut(s)	1756
SatI	GCNGC	4 cut(s)	1125, 1224, 1721, 2201
Sau3AI	GATC	9 cut(s)	136, 399, 480, 581, 754, 1036, 1058, 1848, 2254
Sau96I	GGNCC	4 cut(s)	158, 196, 842, 1730
SchI	GAGTC	6 cut(s)	23, 38, 613, 744, 2090, 2117
ScrFI	CCNGG	7 cut(s)	201, 535, 1388, 1550, 1758, 1960, 2174
SduI	GDGCHC	3 cut(s)	1756, 2444, 2463
SfaNI	GCATC	7 cut(s)	55, 72, 94, 520, 1278, 1707, 2479
SfcI	CTRYAG	2 cut(s)	837, 1884
Sfr274I	CTCGAG	1 cut(s)	191
SinI	GGWCC	2 cut(s)	196, 1730
SlaI	CTCGAG	1 cut(s)	191
SmiMI	CAYNNNNRTG	1 cut(s)	1631
SmlI	CTYRAG	8 cut(s)	191, 410, 575, 605, 1673, 2027, 2119, 2419
SmoI	CTYRAG	8 cut(s)	191, 410, 575, 605, 1673, 2027, 2119, 2419
SnaBI	TACGTA	1 cut(s)	2042
SsiI	CCGC	7 cut(s)	19, 711, 1034, 1224, 1720, 1833, 2059
SspMI	CTAG	5 cut(s)	1160, 1236, 1326, 1451, 2066
SstI	GAGCTC	1 cut(s)	1756
StyD4I	CCNGG	7 cut(s)	199, 533, 1386, 1548, 1756, 1958, 2172
StyI	CCWWGG	4 cut(s)	268, 871, 988, 2316
TaaI	ACNGT	2 cut(s)	94, 730
TaiI	ACGT	6 cut(s)	183, 392, 644, 1076, 1416, 2044
TaqI	TCGA	7 cut(s)	12, 54, 168, 192, 487, 738, 1844
TatI	WGTACW	2 cut(s)	384, 802
TauI	GCSGC	2 cut(s)	1226, 1723
TfiI	GAWTC	7 cut(s)	101, 148, 170, 514, 2270, 2321, 2372
TscAI	CASTG	7 cut(s)	160, 322, 621, 805, 919, 2247, 2449
TseFI	GTSAC	2 cut(s)	2061, 2233
TseI	GCWGC	2 cut(s)	1124, 2200
Tsp45I	GTSAC	2 cut(s)	2061, 2233
TspGWI	ACGGA	3 cut(s)	513, 1042, 2323
TspRI	CASTG	7 cut(s)	160, 322, 621, 805, 919, 2247, 2449
Van91I	CCANNNNNTGG	1 cut(s)	1763
Vha464I	CTTAAG	2 cut(s)	410, 1673
VpaK11BI	GGWCC	2 cut(s)	196, 1730
VspI	ATTAAT	1 cut(s)	342
XagI	CCTNNNNNAGG	1 cut(s)	2419
XapI	RAATTY	5 cut(s)	809, 1344, 1794, 2033, 2449
XceI	RCATGY	2 cut(s)	80, 494
XhoI	CTCGAG	1 cut(s)	191
XspI	CTAG	5 cut(s)	1160, 1236, 1326, 1451, 2066
Zsp2I	ATGCAT	3 cut(s)	87, 1271, 1435

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.