Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0007989

Physical Location & Seq

Genomic Coordinates Reverse (-)

36306783 .. 36316405

Gene Structure 9623 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000013711

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2583 bp

ATGGCTGAGGAGGAGGAAGGTGGCGAGATCAATGGTGGAGTGGGATCCCTGGACTCCATCGAGTCTCGGTGGGTGTTTCAGGATGAGGACGACTCAGAGATCGACGACGAGGACGCAGAGGAAGACGTGAGGCACCGCCGGACCGTAATGGATTCTGAGGACGACGAGGAGGACGATAATGCCGAGCAGAGGTTGATTCGCACTGGGCCTCGCGTCGATTCTTTCGATGTCGAAGCCCTCGAGGTCCCTGGCGCTCACCGAAATGAATATGAGGATTTCAGTCTTGGAAGGAAAATAGTAATTGCTTTCCAGACCCTTGGGGTTGTATTTGGTGATGTTGGAACCAGTCCATTGTATACCTTTAGTGTGCTGTTTAGCAAGGCACCTATTAATGGAAATGAAGATGTTCTGGGCGCATTGTCACTAGTTCTATACACCTTAATATTAATCCCCTTGCTTAAGTATGTTCTGGTTGTTCTTTGGGCTAATGATGATGGTGAAGGTGGTACTTTTGCTTTGTACTCATTGATCTGCCGACATGCTAAGGTCAGTCTTCTTCCAAATCAGCTTCCATCAGATGCCCGCATATCAAGCTTCAGGCTAAAGGTGCCATCTCCTGAACTTGAGAGATCTTTGAAAATAAAGGAAAAGCTTGAGGCTTCACTGACTCTGAAGAAGCTTCTTCTAATGTTAGTGCTTGCTGGTACTTCTATGGTGATAGCTGATGGCGTTGTTACACCAGCAATGTCAGTAGTTTCAGCTGTTGGTGGCCTAAAGATTGGAGTAGATGGAATTACGCAAGATCAAGTGGTGATGATTTCAGTTGCGTTTCTTATAATCTTGTTCAGTGTACAGAAATTTGGGACAAGTAAAGTGGGACTTGTTGTAGGCCCTGCCTTATTCATATGGTTTTGTTTCCTTGGGGGTTTTGGTATTTACAACATTGTTCAATATGACAGCAGTGTCTTGAGGGCCTTCAATCCTGTTCACATCTTCTACTTCTTCAAGAGGAACTCAACTAAGGCCTGGTATGCTCTTGGGGGTTGTCTTCTATGCGCAACAGGTTCTGAGGCAATGTTTGCAGATCTTTGCTACTTTTCTGTGCGATCAGTCCAGCTTACATTTGTTTGCCTTGTTTTACCCTGCCTTATGTTGGGTTATTTGGGTCAAGCTGCATACCTTATGGAGAATCCCAATGGGGCTGATCAAGCTTTCTTTTCTTCAATTCCAAGTGGTGCTTTTTGGCCTGTGTTCTTCATTGCTAATATTGCTGCATTGATTGCTAGTCGTGCAATGACAACAGCCACCTTTTCATGCATAAAACAATCAATGGCACTTGGTTGTTTCCCTCGTCTTAAAATCATACATACCTCCCGGAAATTTATGGGGCAGATTTATATCCCTGTTGTGAATTGGTTTTTGCTGGTGGTTTGCCTGGTGTCTATCTGCTCTATTTCAAGCATTGATGAGATTGGAAATGCATATGGAATTGCTGAGCTAGGAGTGATGATGATGACAACCATTTTAGTAACAATTGTTATGCTTCTTATATGGCAGATAAACATTATTATCGTGCTGAGTTTCATAATAATTTTCCTGGGGTTGGAATTGACATTTTTCTCATCAGTTCTCTGGAGTGTGGGAGATGGAAGTTGGATAATTTTGGTCTTTGCTGTTATCATGTTCTTCGTAATGTTTATATGGAACTATGGAAGCAAGCTTAAGTATGAAACTGAAGTAAAGCAAAAGCTGTCAATGGATTTGATGCGGGAATTGGGTCCTAATCTTGGGACCATTAGAGCTCCAGGAATTGGCTTACTTTACAATGAGCTAGTGAAGGGTATACCAGCAATCTTTGGCCATTTTCTGACCACACTTCCTGCAGTCCACTCAATGGTCATATTTGTATGTATAAAATACGTTCCAGTTCCTGTAGTGCCTCAAAGTGAAAGGTTCCTATTCCGGCGTGTCTGCCCAAAAAGCTACCACATATTTCGTTGCATTGCCAGGTATGGCTACAAGGATGTTAGGAAGGAAAGTCACCAGACCTTTGAACAGTTACTAATTGAGAGCCTCGAGAAATTTATTCGTCGGGAAGCTCAGGAGCGGTCATTGGAGAGTGATGGGGATGATGGGGATACAGATTCAGAAGATGAGTCCTCTTGCTCAAGGGTTCTTATTGCTCCCAATGGAAGTGTCTACTCACTTGGCGTTCCTCTCCTGGCTGAGTACAAGGAGCCGAGCAAGCCAATCTCAGAAGCTAGCACATCTGATGAGGTGACGTCAGTGCCTCCTACAGATCCAGCAATTTCTGATGCTGAGCAGAGTATTGACAGGGAACTATCTTTTATTCGCAAGGCAAAAGAATCTGGGGTTGTCTATCTTCTTGGCCATGGGGATATCAGGGCCAGAAAAGATTCCTGGTTTATTAAGAAGTTAATCATAAATTACTTTTATGCCTTCTTGAGAAAAAATTGCAGGAGGGGGATTGCAAATTTGAGCGTGCCTCATTCGCATCTAATGCAGGCAATTGGAGTTACAAAAGGCCTTGATGTCACACGCCTTTCCATCACTGCTGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0004016 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008150 GO:0008324 GO:0009975 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015318 GO:0015672 GO:0016020 GO:0016829 GO:0016849 GO:0022857 GO:0022890 GO:0030001 GO:0031090 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0071804 GO:0071805 GO:0071944 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

K_trans

Protein Analysis

861

Amino Acids

95.37

Weight (kDa)

5.28

Isoelectric Point (pI)

39.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
K_trans	PF02705	102 - 587	3.4e-147	K+ potassium transporter integral membrane domain
K_trans_C	PF22776	602 - 842	5.1e-22	K+ potassium transporter C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007989)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33530 AT4G33530 AT5G09400
fragaria_vesca	FvH4_2g11940 FvH4_2g11940 FvH4_2g11940 FvH4_2g11940
malus_domestica	MD05G1045000.v1.1 MD10G1051900.v1.1
prunus_persica	Prupe.8G060500_v2.0.a1 Prupe.8G060500_v2.0.a1 Prupe.8G060500_v2.0.a1
pyrus_communis	pycom05g03750 pycom10g03670
rosa_chinensis	RchiOBHm_Chr6g0271831
rosa_laevigata	RLG00000013711
rosa_multiflora	Rmu_sc0002396.1_g000028
rosa_roxburghii	Rroxscaffold_173G00434990 Rroxscaffold_7G00196740
rosa_rugosa	Rorug06G0063500
rosa_samantha	Rh6AG181700 Rh6BG185800 Rh6CG182300
rosa_wichuraiana	Rw6G015650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	836
AasI	GACNNNNNNGTC	1 cut(s)	962
AatII	GACGTC	1 cut(s)	2285
AbsI	CCTCGAGG	1 cut(s)	239
Acc16I	TGCGCA	1 cut(s)	1057
AccB1I	GGYRCC	3 cut(s)	132, 382, 607
AccB7I	CCANNNNNTGG	2 cut(s)	1811, 1894
AccBSI	CCGCTC	1 cut(s)	2107
AccI	GTMKAC	3 cut(s)	356, 1843, 2199
AccII	CGCG	1 cut(s)	213
AciI	CCGC	4 cut(s)	136, 583, 1768, 2107
AclWI	GGATC	3 cut(s)	39, 52, 2294
AcoI	YGGCCR	2 cut(s)	1858, 2389
AcsI	RAATTY	4 cut(s)	857, 1379, 2081, 2494
AcuI	CTGAAG	3 cut(s)	580, 692, 1755
AcyI	GRCGYC	1 cut(s)	2282
AfaI	GTAC	5 cut(s)	508, 521, 706, 852, 2231
AfiI	CCNNNNNNNGG	7 cut(s)	189, 392, 1153, 1603, 1787, 1811, 1894
AflII	CTTAAG	2 cut(s)	458, 1721
AgsI	TTSAA	7 cut(s)	637, 950, 979, 1006, 1224, 1458, 2054
AhlI	ACTAGT	1 cut(s)	424
AjiI	CACGTC	1 cut(s)	127
AjnI	CCWGG	9 cut(s)	48, 247, 1025, 1434, 1596, 1804, 2006, 2220, 2420
Alw21I	GWGCWC	1 cut(s)	1804
Alw26I	GTCTC	1 cut(s)	69
AlwI	GGATC	3 cut(s)	39, 52, 2294
AlwNI	CAGNNNCTG	2 cut(s)	1067, 1931
Ama87I	CYCGRG	2 cut(s)	239, 2075
ApeKI	GCWGC	3 cut(s)	1172, 1271, 2576
ApoI	RAATTY	4 cut(s)	857, 1379, 2081, 2494
AseI	ATTAAT	2 cut(s)	390, 446
Asp700I	GAANNNNTTC	2 cut(s)	405, 2416
AspLEI	GCGC	3 cut(s)	254, 416, 1058
AspS9I	GGNCC	8 cut(s)	141, 206, 244, 890, 972, 1778, 1791, 2406
AsuC2I	CCSGG	1 cut(s)	1375
AsuHPI	GGTGA	7 cut(s)	248, 344, 509, 727, 823, 2033, 2290
AsuNHI	GCTAGC	1 cut(s)	2261
AvaI	CYCGRG	2 cut(s)	239, 2075
AvaII	GGWCC	4 cut(s)	141, 244, 1778, 1791
BalI	TGGCCA	2 cut(s)	1860, 2391
BamHI	GGATCC	1 cut(s)	44
BanI	GGYRCC	3 cut(s)	132, 382, 607
BanII	GRGCYC	1 cut(s)	1804
BbsI	GAAGAC	3 cut(s)	129, 545, 1040
Bbv12I	GWGCWC	1 cut(s)	1804
BbvCI	CCTCAGC	1 cut(s)	6
BbvI	GCAGC	3 cut(s)	1159, 1258, 2563
BciT130I	CCWGG	9 cut(s)	50, 249, 1027, 1436, 1598, 1806, 2008, 2222, 2422
BciVI	GTATCC	1 cut(s)	2131
BclI	TGATCA	1 cut(s)	1204
BcnI	CCSGG	1 cut(s)	1375
BcoDI	GTCTC	1 cut(s)	69
BcuI	ACTAGT	1 cut(s)	424
BfaI	CTAG	5 cut(s)	425, 1284, 1499, 1832, 2262
BfmI	CTRYAG	3 cut(s)	1881, 1932, 2295
BfoI	RGCGCY	1 cut(s)	255
BfrI	CTTAAG	2 cut(s)	458, 1721
BfuI	GTATCC	1 cut(s)	2131
BglII	AGATCT	2 cut(s)	629, 1084
BisI	GCNGC	3 cut(s)	1173, 1272, 2577
BlpI	GCTNAGC	2 cut(s)	1494, 2319
BlsI	GCNGC	3 cut(s)	1174, 1273, 2578
Bme18I	GGWCC	4 cut(s)	141, 244, 1778, 1791
BmeT110I	CYCGRG	2 cut(s)	239, 2075
BmgBI	CACGTC	1 cut(s)	127
BmgT120I	GGNCC	8 cut(s)	141, 206, 244, 890, 972, 1778, 1791, 2406
BmrI	ACTGGG	1 cut(s)	213
BmsI	GCATC	4 cut(s)	568, 1755, 2305, 2524
BmtI	GCTAGC	1 cut(s)	2265
BmuI	ACTGGG	1 cut(s)	213
BpiI	GAAGAC	3 cut(s)	129, 545, 1040
BplI	GAGNNNNNCTC	4 cut(s)	77, 109, 2491, 2523
BpmI	CTGGAG	2 cut(s)	1654, 1788
Bpu10I	CCTNAGC	3 cut(s)	6, 543, 2100
Bpu1102I	GCTNAGC	2 cut(s)	1494, 2319
BpuEI	CTTGAG	5 cut(s)	644, 674, 988, 2152, 2485
BpuMI	CCSGG	1 cut(s)	1375
BsaBI	GATNNNNATC	1 cut(s)	1397
BsaHI	GRCGYC	1 cut(s)	2282
BsaJI	CCNNGG	6 cut(s)	48, 247, 316, 919, 1597, 2392
Bsc4I	CCNNNNNNNGG	7 cut(s)	189, 392, 1153, 1603, 1787, 1811, 1894
Bse1I	ACTGG	3 cut(s)	208, 345, 1925
Bse3DI	GCAATG	5 cut(s)	750, 1080, 1257, 1299, 2001
Bse8I	GATNNNNATC	1 cut(s)	1397
BseBI	CCWGG	9 cut(s)	50, 249, 1027, 1436, 1598, 1806, 2008, 2222, 2422
BseDI	CCNNGG	6 cut(s)	48, 247, 316, 919, 1597, 2392
BseGI	GGATG	3 cut(s)	88, 2029, 2134
BseJI	GATNNNNATC	1 cut(s)	1397
BseLI	CCNNNNNNNGG	7 cut(s)	189, 392, 1153, 1603, 1787, 1811, 1894
BseMI	GCAATG	5 cut(s)	750, 1080, 1257, 1299, 2001
BseMII	CTCAG	9 cut(s)	108, 147, 1059, 1485, 1568, 2114, 2217, 2268, 2310
BseNI	ACTGG	3 cut(s)	208, 345, 1925
BseRI	GAGGAG	3 cut(s)	23, 26, 182
BseXI	GCAGC	3 cut(s)	1159, 1258, 2563
Bsh1236I	CGCG	1 cut(s)	213
BshNI	GGYRCC	3 cut(s)	132, 382, 607
BsiHKAI	GWGCWC	1 cut(s)	1804
BsiHKCI	CYCGRG	2 cut(s)	239, 2075
BsiSI	CCGG	3 cut(s)	139, 1375, 1963
BslFI	GGGAC	4 cut(s)	230, 877, 891, 1804
BslI	CCNNNNNNNGG	7 cut(s)	189, 392, 1153, 1603, 1787, 1811, 1894
BsmAI	GTCTC	1 cut(s)	69
BsmFI	GGGAC	4 cut(s)	230, 877, 891, 1804
BsoBI	CYCGRG	2 cut(s)	239, 2075
Bsp1286I	GDGCHC	1 cut(s)	1804
Bsp1407I	TGTACA	1 cut(s)	850
Bsp1720I	GCTNAGC	2 cut(s)	1494, 2319
Bsp19I	CCATGG	1 cut(s)	2392
BspACI	CCGC	4 cut(s)	136, 583, 1768, 2107
BspCNI	CTCAG	9 cut(s)	107, 148, 1060, 1486, 1569, 2113, 2218, 2267, 2311
BspFNI	CGCG	1 cut(s)	213
BspMAI	CTGCAG	1 cut(s)	1885
BspOI	GCTAGC	1 cut(s)	2265
BspPI	GGATC	3 cut(s)	39, 52, 2294
BspT107I	GGYRCC	3 cut(s)	132, 382, 607
BspTI	CTTAAG	2 cut(s)	458, 1721
BsrBI	CCGCTC	1 cut(s)	2107
BsrDI	GCAATG	5 cut(s)	750, 1080, 1257, 1299, 2001
BsrGI	TGTACA	1 cut(s)	850
BsrI	ACTGG	3 cut(s)	208, 345, 1925
BssECI	CCNNGG	6 cut(s)	48, 247, 316, 919, 1597, 2392
BssNAI	GTATAC	2 cut(s)	357, 1844
BssNI	GRCGYC	1 cut(s)	2282
BssT1I	CCWWGG	3 cut(s)	316, 919, 2392
Bst1107I	GTATAC	2 cut(s)	357, 1844
Bst2UI	CCWGG	9 cut(s)	50, 249, 1027, 1436, 1598, 1806, 2008, 2222, 2422
Bst4CI	ACNGT	2 cut(s)	145, 2058
BstACI	GRCGYC	1 cut(s)	2282
BstAFI	CTTAAG	2 cut(s)	458, 1721
BstAPI	GCANNNNNTGC	3 cut(s)	1079, 1280, 2521
BstAUI	TGTACA	1 cut(s)	850
BstC8I	GCNNGC	7 cut(s)	583, 699, 1718, 2246, 2263, 2504, 2526
BstDSI	CCRYGG	1 cut(s)	2392
BstF5I	GGATG	3 cut(s)	88, 2029, 2134
BstFNI	CGCG	1 cut(s)	213
BstH2I	RGCGCY	1 cut(s)	255
BstHHI	GCGC	3 cut(s)	254, 416, 1058
BstMAI	GTCTC	1 cut(s)	69
BstNI	CCWGG	9 cut(s)	50, 249, 1027, 1436, 1598, 1806, 2008, 2222, 2422
BstNSI	RCATGY	1 cut(s)	542
BstSFI	CTRYAG	3 cut(s)	1881, 1932, 2295
BstUI	CGCG	1 cut(s)	213
BstV1I	GCAGC	3 cut(s)	1159, 1258, 2563
BstV2I	GAAGAC	3 cut(s)	129, 545, 1040
BstX2I	RGATCY	4 cut(s)	44, 629, 1084, 2299
BstXI	CCANNNNNNTGG	1 cut(s)	317
BstYI	RGATCY	4 cut(s)	44, 629, 1084, 2299
BstZ17I	GTATAC	2 cut(s)	357, 1844
BsuI	GTATCC	1 cut(s)	2131
BtgI	CCRYGG	1 cut(s)	2392
BtrI	CACGTC	1 cut(s)	127
BtsCI	GGATG	3 cut(s)	88, 2029, 2134
BtsI	GCAGTG	2 cut(s)	967, 2571
BtsIMutI	CAGTG	6 cut(s)	201, 662, 853, 967, 2292, 2571
Cac8I	GCNNGC	7 cut(s)	583, 699, 1718, 2246, 2263, 2504, 2526
CaiI	CAGNNNCTG	2 cut(s)	1067, 1931
CfoI	GCGC	3 cut(s)	254, 416, 1058
Cfr13I	GGNCC	8 cut(s)	141, 206, 244, 890, 972, 1778, 1791, 2406
CpoI	CGGWCCG	1 cut(s)	141
CseI	GACGC	2 cut(s)	122, 202
Csp6I	GTAC	5 cut(s)	507, 520, 705, 851, 2230
CspCI	CAANNNNNGTGG	2 cut(s)	855, 890
CspI	CGGWCCG	1 cut(s)	141
CviAII	CATG	4 cut(s)	539, 1314, 1681, 2393
CviQI	GTAC	5 cut(s)	507, 520, 705, 851, 2230
DrdI	GACNNNNNNGTC	1 cut(s)	962
DseDI	GACNNNNNNGTC	1 cut(s)	962
EaeI	YGGCCR	2 cut(s)	1858, 2389
Ecl136II	GAGCTC	1 cut(s)	1802
Eco130I	CCWWGG	3 cut(s)	316, 919, 2392
Eco147I	AGGCCT	2 cut(s)	1025, 2547
Eco24I	GRGCYC	1 cut(s)	1804
Eco32I	GATATC	1 cut(s)	2401
Eco47I	GGWCC	4 cut(s)	141, 244, 1778, 1791
Eco53kI	GAGCTC	1 cut(s)	1802
Eco57I	CTGAAG	3 cut(s)	580, 692, 1755
Eco88I	CYCGRG	2 cut(s)	239, 2075
EcoICRI	GAGCTC	1 cut(s)	1802
EcoO109I	RGGNCCY	4 cut(s)	244, 890, 972, 1778
EcoRII	CCWGG	9 cut(s)	48, 247, 1025, 1434, 1596, 1804, 2006, 2220, 2420
EcoRV	GATATC	1 cut(s)	2401
EcoT14I	CCWWGG	3 cut(s)	316, 919, 2392
EcoT22I	ATGCAT	2 cut(s)	1319, 1483
EcoT38I	GRGCYC	1 cut(s)	1804
ErhI	CCWWGG	3 cut(s)	316, 919, 2392
FaeI	CATG	4 cut(s)	542, 1317, 1684, 2396
FalI	AAGNNNNNCTT	4 cut(s)	864, 896, 1222, 1254
FaqI	GGGAC	4 cut(s)	230, 877, 891, 1804
FatI	CATG	4 cut(s)	538, 1313, 1680, 2392
FauI	CCCGC	2 cut(s)	590, 1761
FauNDI	CATATG	2 cut(s)	905, 1483
FbaI	TGATCA	1 cut(s)	1204
FblI	GTMKAC	3 cut(s)	356, 1843, 2199
Fnu4HI	GCNGC	3 cut(s)	1173, 1272, 2577
FokI	GGATG	3 cut(s)	95, 2036, 2141
FriOI	GRGCYC	1 cut(s)	1804
Fsp4HI	GCNGC	3 cut(s)	1173, 1272, 2577
FspBI	CTAG	5 cut(s)	425, 1284, 1499, 1832, 2262
FspI	TGCGCA	1 cut(s)	1057
GlaI	GCGC	3 cut(s)	253, 415, 1057
GluI	GCNGC	3 cut(s)	1173, 1272, 2577
GsuI	CTGGAG	2 cut(s)	1654, 1788
HaeII	RGCGCY	1 cut(s)	255
HapII	CCGG	3 cut(s)	139, 1375, 1963
HgaI	GACGC	2 cut(s)	122, 202
HhaI	GCGC	3 cut(s)	254, 416, 1058
Hin1I	GRCGYC	1 cut(s)	2282
Hin1II	CATG	4 cut(s)	542, 1317, 1684, 2396
Hin6I	GCGC	3 cut(s)	252, 414, 1056
HinP1I	GCGC	3 cut(s)	252, 414, 1056
HindIII	AAGCTT	5 cut(s)	592, 650, 677, 1209, 1718
HpaII	CCGG	3 cut(s)	139, 1375, 1963
HphI	GGTGA	7 cut(s)	248, 344, 509, 727, 823, 2033, 2290
Hpy166II	GTNNAC	6 cut(s)	357, 851, 988, 1844, 1888, 2200
Hpy8I	GTNNAC	6 cut(s)	357, 851, 988, 1844, 1888, 2200
Hpy99I	CGWCG	5 cut(s)	107, 110, 167, 218, 2094
HpyAV	CCTTC	7 cut(s)	11, 282, 494, 985, 1831, 2026, 2470
HpyCH4III	ACNGT	2 cut(s)	145, 2058
HpyCH4IV	ACGT	3 cut(s)	126, 1920, 2282
HpySE526I	ACGT	3 cut(s)	126, 1920, 2282
Hsp92I	GRCGYC	1 cut(s)	2282
Hsp92II	CATG	4 cut(s)	542, 1317, 1684, 2396
HspAI	GCGC	3 cut(s)	252, 414, 1056
Ksp22I	TGATCA	1 cut(s)	1204
LmnI	GCTCC	4 cut(s)	1807, 2104, 2188, 2236
Lsp1109I	GCAGC	3 cut(s)	1159, 1258, 2563
LweI	GCATC	4 cut(s)	568, 1755, 2305, 2524
MaeI	CTAG	5 cut(s)	425, 1284, 1499, 1832, 2262
MaeII	ACGT	3 cut(s)	126, 1920, 2282
MaeIII	GTNAC	8 cut(s)	420, 733, 1528, 2039, 2058, 2278, 2536, 2554
MbiI	CCGCTC	1 cut(s)	2107
MfeI	CAATTG	2 cut(s)	1533, 2529
MflI	RGATCY	4 cut(s)	44, 629, 1084, 2299
MhlI	GDGCHC	1 cut(s)	1804
MlsI	TGGCCA	2 cut(s)	1860, 2391
MluNI	TGGCCA	2 cut(s)	1860, 2391
MlyI	GAGTC	5 cut(s)	47, 71, 86, 661, 2165
MmeI	TCCRAC	3 cut(s)	319, 1584, 1634
Mox20I	TGGCCA	2 cut(s)	1860, 2391
Mph1103I	ATGCAT	2 cut(s)	1319, 1483
MroXI	GAANNNNTTC	2 cut(s)	405, 2416
MscI	TGGCCA	2 cut(s)	1860, 2391
MseI	TTAA	8 cut(s)	390, 440, 446, 459, 1356, 1722, 2430, 2438
MslI	CAYNNNNRTG	1 cut(s)	261
Msp20I	TGGCCA	2 cut(s)	1860, 2391
MspA1I	CMGCKG	1 cut(s)	761
MspCI	CTTAAG	2 cut(s)	458, 1721
MspI	CCGG	3 cut(s)	139, 1375, 1963
MunI	CAATTG	2 cut(s)	1533, 2529
MvaI	CCWGG	9 cut(s)	50, 249, 1027, 1436, 1598, 1806, 2008, 2222, 2422
MvnI	CGCG	1 cut(s)	213
NciI	CCSGG	1 cut(s)	1375
NcoI	CCATGG	1 cut(s)	2392
NdeI	CATATG	2 cut(s)	905, 1483
NheI	GCTAGC	1 cut(s)	2261
NlaIII	CATG	4 cut(s)	542, 1317, 1684, 2396
NmeAIII	GCCGAG	2 cut(s)	208, 2265
NmuCI	GTSAC	4 cut(s)	420, 2039, 2278, 2554
NsbI	TGCGCA	1 cut(s)	1057
NsiI	ATGCAT	2 cut(s)	1319, 1483
NspI	RCATGY	1 cut(s)	542
PaeR7I	CTCGAG	2 cut(s)	239, 2075
PceI	AGGCCT	2 cut(s)	1025, 2547
PcsI	WCGNNNNNNNCGW	4 cut(s)	171, 180, 222, 237
PdmI	GAANNNNTTC	2 cut(s)	405, 2416
PfeI	GAWTC	7 cut(s)	152, 196, 218, 1189, 2144, 2366, 2417
PflMI	CCANNNNNTGG	2 cut(s)	1811, 1894
PfoI	TCCNGGA	2 cut(s)	1373, 1804
PkrI	GCNGC	3 cut(s)	1174, 1273, 2578
PleI	GAGTC	5 cut(s)	47, 70, 86, 661, 2164
PpsI	GAGTC	5 cut(s)	47, 70, 86, 661, 2164
PpuMI	RGGWCCY	2 cut(s)	244, 1778
PshBI	ATTAAT	2 cut(s)	390, 446
PsiI	TTATAA	1 cut(s)	836
Psp124BI	GAGCTC	1 cut(s)	1804
Psp5II	RGGWCCY	2 cut(s)	244, 1778
Psp6I	CCWGG	9 cut(s)	48, 247, 1025, 1434, 1596, 1804, 2006, 2220, 2420
PspGI	CCWGG	9 cut(s)	48, 247, 1025, 1434, 1596, 1804, 2006, 2220, 2420
PspPI	GGNCC	8 cut(s)	141, 206, 244, 890, 972, 1778, 1791, 2406
PspPPI	RGGWCCY	2 cut(s)	244, 1778
PspXI	VCTCGAGB	1 cut(s)	239
PstI	CTGCAG	1 cut(s)	1885
PstNI	CAGNNNCTG	2 cut(s)	1067, 1931
PsuI	RGATCY	4 cut(s)	44, 629, 1084, 2299
PvuII	CAGCTG	1 cut(s)	761
RsaI	GTAC	5 cut(s)	508, 521, 706, 852, 2231
RsaNI	GTAC	5 cut(s)	507, 520, 705, 851, 2230
RseI	CAYNNNNRTG	1 cut(s)	261
Rsr2I	CGGWCCG	1 cut(s)	141
RsrII	CGGWCCG	1 cut(s)	141
SacI	GAGCTC	1 cut(s)	1804
SaqAI	TTAA	8 cut(s)	390, 440, 446, 459, 1356, 1722, 2430, 2438
SatI	GCNGC	3 cut(s)	1173, 1272, 2577
Sau96I	GGNCC	8 cut(s)	141, 206, 244, 890, 972, 1778, 1791, 2406
SchI	GAGTC	5 cut(s)	47, 71, 86, 661, 2165
SduI	GDGCHC	1 cut(s)	1804
SfaNI	GCATC	4 cut(s)	568, 1755, 2305, 2524
SfcI	CTRYAG	3 cut(s)	1881, 1932, 2295
Sfr274I	CTCGAG	2 cut(s)	239, 2075
SinI	GGWCC	4 cut(s)	141, 244, 1778, 1791
SlaI	CTCGAG	2 cut(s)	239, 2075
SmiMI	CAYNNNNRTG	1 cut(s)	261
SmlI	CTYRAG	9 cut(s)	239, 458, 623, 653, 967, 1721, 2075, 2167, 2464
SmoI	CTYRAG	9 cut(s)	239, 458, 623, 653, 967, 1721, 2075, 2167, 2464
SpeI	ACTAGT	1 cut(s)	424
SseBI	AGGCCT	2 cut(s)	1025, 2547
SsiI	CCGC	4 cut(s)	136, 583, 1768, 2107
SspI	AATATT	2 cut(s)	444, 1267
SspMI	CTAG	5 cut(s)	425, 1284, 1499, 1832, 2262
SstI	GAGCTC	1 cut(s)	1804
StuI	AGGCCT	2 cut(s)	1025, 2547
StyI	CCWWGG	3 cut(s)	316, 919, 2392
TaaI	ACNGT	2 cut(s)	145, 2058
TaiI	ACGT	3 cut(s)	129, 1923, 2285
TaqI	TCGA	7 cut(s)	60, 102, 216, 225, 231, 240, 2076
TatI	WGTACW	3 cut(s)	519, 850, 2229
TfiI	GAWTC	7 cut(s)	152, 196, 218, 1189, 2144, 2366, 2417
Tru1I	TTAA	8 cut(s)	390, 440, 446, 459, 1356, 1722, 2430, 2438
Tru9I	TTAA	8 cut(s)	390, 440, 446, 459, 1356, 1722, 2430, 2438
TscAI	CASTG	6 cut(s)	208, 669, 853, 967, 2292, 2578
TseFI	GTSAC	4 cut(s)	420, 2039, 2278, 2554
TseI	GCWGC	3 cut(s)	1172, 1271, 2576
Tsp45I	GTSAC	4 cut(s)	420, 2039, 2278, 2554
TspDTI	ATGAA	7 cut(s)	279, 414, 892, 1246, 1302, 1573, 1743
TspRI	CASTG	6 cut(s)	208, 669, 853, 967, 2292, 2578
Van91I	CCANNNNNTGG	2 cut(s)	1811, 1894
Vha464I	CTTAAG	2 cut(s)	458, 1721
VpaK11BI	GGWCC	4 cut(s)	141, 244, 1778, 1791
VspI	ATTAAT	2 cut(s)	390, 446
XapI	RAATTY	4 cut(s)	857, 1379, 2081, 2494
XceI	RCATGY	1 cut(s)	542
XhoI	CTCGAG	2 cut(s)	239, 2075
XmiI	GTMKAC	3 cut(s)	356, 1843, 2199
XmnI	GAANNNNTTC	2 cut(s)	405, 2416
XspI	CTAG	5 cut(s)	425, 1284, 1499, 1832, 2262
ZraI	GACGTC	1 cut(s)	2283
Zsp2I	ATGCAT	2 cut(s)	1319, 1483

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.