AT5G09860

Tho complex subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0006099
Physical Location & Seq
Forward (+)
3066562 .. 3070989
4428 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G09860.1

Sequence Viewer

Length: 1800 bp
ATGGATGCATTTAGAGATGCTATATTGCAGCGAGCTCCAATTGAAACCTTTGCACTCAAGACTGTTCAACACTTTATACAACCTCAGAAACAAACAAAGTTGGCTCAAGATGAAAACCAAATGCTTGAAAACATGCTCCGGACATTGCTGCAGGAGCTAGTGGCTGCTGCTGCGCAATCAGGGGAGCAAATTATGCAGTATGGTCAGTTGATTGACGATGATGATGATGATGATGATATACATGGACAGATTCCTCATCTTCTAGATGTTGTGCTTTATCTTTGTGAGAAAGAGCATGTAGAAGGTGGCATGATATTCCAGCTGCTGGAGGATTTGACCGAAATGTCTACTATGAAAAACTGTAAAGATGTTTTCGGTTATATTGAAAGCAAACAAGATATATTGGGCAAGCAAGAGCTTTTTGCACGCGGAAAACTTGTCATGTTGAGGACTTGCAACCAACTTCTCCGCCGACTCTCAAAGGCCAATGATGTTGTATTCTGTGGAAGGATTCTTATGTTTTTGGCTCACTTTTTTCCGTTATCTGAGCGCTCAGCCGTCAATATAAAAGGTGTTTTTAATACATCTAATGAAACCAAATATGAAAAAGATCCTCCAAAAGGCATTTCTGTAGATTTCAACTTCTACAAGACATTTTGGAGTTTACAGGAGTATTTCTGTAATCCCGCTTCTCTTACTTCCGCATCTACCAAGTGGCAGAAATTTTCATCCAGTTTGGCGGTTGTTTTAAACACCTTTGATGCTCAACCACTAAGCGAAGAAGAGGGAGAGGCTAATAGTTTGGAGGAAGAGGCAGCAACTTTTAATATAAAGTACCTAACAAGTAGTAAATTGATGGGTTTAGAGTTAAAGGATTCGAGTTTCCGACGACATATTCTTCTCCAGTGCCTCATTATGTTTGATTATCTAAGGGCACCAGGGAAGAACGACAAAGATCTGCCATCTGAAACCATGAAGGAAGAACTTAAGTCATGTGAGGATCGTGTAAAGAAATTGCTTGAGATCACTCCGCCTAAAGGGAAAGAATTCCTCCGTGCAGTTGAGCATATACTGGAGCGCGAAAAGAATTGGGTCTGGTGGAAACGTGATGGATGTCCACCATTTGAAAAGCAACCGATAGATAAGAAATCACCTAATGCAGGGCAAAAGAAACGGAGACAAAGATGGAGATTGGGAAATAAAGAACTCTCCCAACTTTGGAGATGGGCAGATCAAAATCCGAATGCTTTGACTGATTCTCAACGCGTGCGAACCCCTGATATTGCAGACTACTGGAAACCATTAGCAGAAGATATGGATCCATCAGCTGGCATAGAAGATGAGTACCATCATAAAAACAACAGAGTTTACTGCTGGAAAGGTCTTCGGTTTACAGCTCGGCAAGACCTTGAAGGATTTTCTAGGTTTACTGAAATGGGAATCGAAGGAGTTGTCCCAGTTGAACTATTGCCGCCTGAGGTCCGGTCCAAATACCAAGCTAAACCAAACGAAAAAGCCAAACGAGCGAAGAAAGAAGAAACCAAAGGTGGATCTCATGAAACAGAGGGAAACCAGATTGGTGTTTCTAATAGTGAAGCTGAAGCTGAAGGAGGAAGGGGTGATGCAGAGACGATGGAGAGTGATGCTATTGCAGACACTCCTACGCCTGAGGAACAGCAAAGACTCGGTGGTTCTGATACAGAAAACGGTCAAGAGGCCGGTCAAATCGAAGACGGAGAGACAGAAGAAGCTGGTCTGATGGACACTGATCTTGATCATCCTCCTATGCCCGTCTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000160 GO:0000347 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006396 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008104 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009755 GO:0009873 GO:0009892 GO:0009987 GO:0010033 GO:0010267 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0015031 GO:0015833 GO:0015931 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0019222 GO:0023052 GO:0030422 GO:0031047 GO:0031050 GO:0031503 GO:0032870 GO:0032991 GO:0033036 GO:0034613 GO:0034641 GO:0035194 GO:0035556 GO:0040029 GO:0042221 GO:0042886 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046483 GO:0046907 GO:0048519 GO:0050657 GO:0050658 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051028 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070727 GO:0070887 GO:0070918 GO:0071166 GO:0071310 GO:0071359 GO:0071369 GO:0071407 GO:0071426 GO:0071427 GO:0071495 GO:0071702 GO:0071704 GO:0071705 GO:0090304 GO:0098542 GO:1901360 GO:1901698 GO:1901699
KEGG Pathways
Metabolic & Signaling
ko03013 ko03040 map03013 map03040
Pfam Domains
Protein Families
efThoc1

Protein Analysis

599

Amino Acids

68.33

Weight (kDa)

5.05

Isoelectric Point (pI)

54.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
efThoc1 PF11957 86 - 511 2.2e-96 THO complex subunit 1 transcription elongation factor
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 343
Acc16I TGCGCA 1 cut(s) 174
AccB1I GGYRCC 1 cut(s) 934
AccB7I CCANNNNNTGG 2 cut(s) 325, 1328
AccI GTMKAC 1 cut(s) 347
AccII CGCG 3 cut(s) 429, 1080, 1266
AccIII TCCGGA 1 cut(s) 138
AciI CCGC 7 cut(s) 429, 469, 687, 702, 740, 1031, 1472
AclWI GGATC 5 cut(s) 605, 1008, 1313, 1326, 1558
AcsI RAATTY 2 cut(s) 722, 1046
AcuI CTGAAG 2 cut(s) 1620, 1626
AfaI GTAC 2 cut(s) 836, 1346
AfeI AGCGCT 1 cut(s) 551
AfiI CCNNNNNNNGG 6 cut(s) 325, 620, 1037, 1160, 1218, 1328
AflII CTTAAG 1 cut(s) 986
AflIII ACRYGT 1 cut(s) 1264
AgsI TTSAA 8 cut(s) 44, 68, 128, 386, 640, 1127, 1412, 1463
AjnI CCWGG 1 cut(s) 937
AjuI GAANNNNNNNTTGG 2 cut(s) 610, 642
Alw21I GWGCWC 1 cut(s) 37
Alw26I GTCTC 3 cut(s) 1171, 1622, 1733
AlwI GGATC 5 cut(s) 605, 1008, 1313, 1326, 1558
AlwNI CAGNNNCTG 1 cut(s) 325
Aor13HI TCCGGA 1 cut(s) 138
Aor51HI AGCGCT 1 cut(s) 551
AoxI GGCC 2 cut(s) 483, 1716
ApeKI GCWGC 7 cut(s) 28, 148, 164, 167, 170, 322, 815
ApoI RAATTY 2 cut(s) 722, 1046
ArsI GACNNNNNNTTYG 2 cut(s) 1437, 1469
Asp700I GAANNNNTTC 1 cut(s) 1046
AspLEI GCGC 3 cut(s) 175, 552, 1080
AspS9I GGNCC 2 cut(s) 1480, 1485
AsuHPI GGTGA 2 cut(s) 1143, 1631
AvaII GGWCC 2 cut(s) 1480, 1485
AxyI CCTNAGG 2 cut(s) 1476, 1668
BaeGI GKGCMC 1 cut(s) 937
BamHI GGATCC 1 cut(s) 1318
BanI GGYRCC 1 cut(s) 934
BanII GRGCYC 1 cut(s) 37
BarI GAAGNNNNNNTAC 2 cut(s) 673, 705
BbsI GAAGAC 2 cut(s) 1376, 1737
Bbv12I GWGCWC 1 cut(s) 37
BbvI GCAGC 7 cut(s) 40, 135, 151, 154, 157, 309, 827
BccI CCATC 9 cut(s) 850, 970, 1103, 1179, 1218, 1330, 1356, 1627, 1753
BceAI ACGGC 1 cut(s) 542
BciT130I CCWGG 1 cut(s) 939
BclI TGATCA 1 cut(s) 1774
BcoDI GTCTC 3 cut(s) 1171, 1622, 1733
BfaI CTAG 3 cut(s) 158, 263, 1422
BfmI CTRYAG 2 cut(s) 149, 630
BfoI RGCGCY 1 cut(s) 553
BfrI CTTAAG 1 cut(s) 986
BglII AGATCT 1 cut(s) 955
BisI GCNGC 8 cut(s) 29, 149, 165, 168, 171, 323, 816, 1472
BlpI GCTNAGC 1 cut(s) 553
BlsI GCNGC 8 cut(s) 30, 150, 166, 169, 172, 324, 817, 1473
Bme1390I CCNGG 1 cut(s) 939
Bme18I GGWCC 2 cut(s) 1480, 1485
BmgT120I GGNCC 2 cut(s) 1480, 1485
BmiI GGNNCC 2 cut(s) 936, 1320
BmrFI CCNGG 1 cut(s) 939
BmrI ACTGGG 1 cut(s) 1451
BmsI GCATC 5 cut(s) 7, 713, 751, 1612, 1633
BmuI ACTGGG 1 cut(s) 1451
BpiI GAAGAC 2 cut(s) 1376, 1737
BpmI CTGGAG 3 cut(s) 347, 887, 1094
Bpu1102I GCTNAGC 1 cut(s) 553
BpuEI CTTGAG 3 cut(s) 41, 90, 1040
BsaBI GATNNNNATC 3 cut(s) 1236, 1317, 1773
BsaJI CCNNGG 1 cut(s) 938
BsaWI WCCGGW 2 cut(s) 138, 1482
Bsc4I CCNNNNNNNGG 6 cut(s) 325, 620, 1037, 1160, 1218, 1328
Bse118I RCCGGY 1 cut(s) 1718
Bse1I ACTGG 5 cut(s) 732, 904, 1077, 1298, 1457
Bse21I CCTNAGG 2 cut(s) 1476, 1668
Bse3DI GCAATG 1 cut(s) 143
Bse8I GATNNNNATC 3 cut(s) 1236, 1317, 1773
BseAI TCCGGA 1 cut(s) 138
BseBI CCWGG 1 cut(s) 939
BseDI CCNNGG 1 cut(s) 938
BseGI GGATG 4 cut(s) 10, 728, 1118, 1777
BseJI GATNNNNATC 3 cut(s) 1236, 1317, 1773
BseLI CCNNNNNNNGG 6 cut(s) 325, 620, 1037, 1160, 1218, 1328
BseMI GCAATG 1 cut(s) 143
BseMII CTCAG 5 cut(s) 98, 537, 567, 1467, 1659
BseNI ACTGG 5 cut(s) 732, 904, 1077, 1298, 1457
BseSI GKGCMC 1 cut(s) 937
BseXI GCAGC 7 cut(s) 40, 135, 151, 154, 157, 309, 827
BsgI GTGCAG 1 cut(s) 1077
Bsh1236I CGCG 3 cut(s) 429, 1080, 1266
BshFI GGCC 2 cut(s) 485, 1718
BshNI GGYRCC 1 cut(s) 934
BsiHKAI GWGCWC 1 cut(s) 37
BsiSI CCGG 3 cut(s) 139, 1483, 1719
BslFI GGGAC 1 cut(s) 1439
BslI CCNNNNNNNGG 6 cut(s) 325, 620, 1037, 1160, 1218, 1328
BsmAI GTCTC 3 cut(s) 1171, 1622, 1733
BsmBI CGTCTC 1 cut(s) 1622
BsmFI GGGAC 1 cut(s) 1439
BsmI GAATGC 1 cut(s) 1249
BsnI GGCC 2 cut(s) 485, 1718
Bsp1286I GDGCHC 2 cut(s) 37, 937
Bsp13I TCCGGA 1 cut(s) 138
Bsp143I GATC 9 cut(s) 610, 955, 1000, 1023, 1231, 1318, 1550, 1768, 1774
Bsp1720I GCTNAGC 1 cut(s) 553
BspACI CCGC 7 cut(s) 429, 469, 687, 702, 740, 1031, 1472
BspANI GGCC 2 cut(s) 485, 1718
BspCNI CTCAG 5 cut(s) 97, 538, 566, 1468, 1660
BspEI TCCGGA 1 cut(s) 138
BspFNI CGCG 3 cut(s) 429, 1080, 1266
BspHI TCATGA 2 cut(s) 1555, 1796
BspLI GGNNCC 2 cut(s) 936, 1320
BspMAI CTGCAG 1 cut(s) 153
BspPI GGATC 5 cut(s) 605, 1008, 1313, 1326, 1558
BspT107I GGYRCC 1 cut(s) 934
BspTI CTTAAG 1 cut(s) 986
BsrDI GCAATG 1 cut(s) 143
BsrFI RCCGGY 1 cut(s) 1718
BsrI ACTGG 5 cut(s) 732, 904, 1077, 1298, 1457
BssAI RCCGGY 1 cut(s) 1718
BssECI CCNNGG 1 cut(s) 938
BssMI GATC 9 cut(s) 610, 955, 1000, 1023, 1231, 1318, 1550, 1768, 1774
Bst2UI CCWGG 1 cut(s) 939
Bst4CI ACNGT 3 cut(s) 64, 362, 1709
Bst6I CTCTTC 2 cut(s) 777, 804
BstAFI CTTAAG 1 cut(s) 986
BstAPI GCANNNNNTGC 1 cut(s) 193
BstC8I GCNNGC 5 cut(s) 33, 410, 427, 1268, 1330
BstDEI CTNAG 7 cut(s) 84, 546, 553, 773, 929, 1476, 1668
BstENI CCTNNNNNAGG 2 cut(s) 618, 1158
BstF5I GGATG 4 cut(s) 10, 728, 1118, 1777
BstFNI CGCG 3 cut(s) 429, 1080, 1266
BstH2I RGCGCY 1 cut(s) 553
BstHHI GCGC 3 cut(s) 175, 552, 1080
BstKTI GATC 9 cut(s) 613, 958, 1003, 1026, 1234, 1321, 1553, 1771, 1777
BstMAI GTCTC 3 cut(s) 1171, 1622, 1733
BstMBI GATC 9 cut(s) 610, 955, 1000, 1023, 1231, 1318, 1550, 1768, 1774
BstMWI GCNNNNNNNGC 4 cut(s) 154, 170, 193, 1523
BstNI CCWGG 1 cut(s) 939
BstNSI RCATGY 2 cut(s) 136, 299
BstSCI CCNGG 1 cut(s) 937
BstSFI CTRYAG 2 cut(s) 149, 630
BstSLI GKGCMC 1 cut(s) 937
BstUI CGCG 3 cut(s) 429, 1080, 1266
BstV1I GCAGC 7 cut(s) 40, 135, 151, 154, 157, 309, 827
BstV2I GAAGAC 2 cut(s) 1376, 1737
BstX2I RGATCY 4 cut(s) 610, 955, 1318, 1550
BstYI RGATCY 4 cut(s) 610, 955, 1318, 1550
Bsu36I CCTNAGG 2 cut(s) 1476, 1668
BsuRI GGCC 2 cut(s) 485, 1718
BtsCI GGATG 4 cut(s) 10, 728, 1118, 1777
BtsIMutI CAGTG 2 cut(s) 911, 1764
Cac8I GCNNGC 5 cut(s) 33, 410, 427, 1268, 1330
CaiI CAGNNNCTG 1 cut(s) 325
CciI TCATGA 2 cut(s) 1555, 1796
CfoI GCGC 3 cut(s) 175, 552, 1080
Cfr10I RCCGGY 1 cut(s) 1718
Cfr13I GGNCC 2 cut(s) 1480, 1485
Csp6I GTAC 2 cut(s) 835, 1345
CviAII CATG 9 cut(s) 133, 242, 296, 310, 442, 973, 993, 1556, 1797
CviQI GTAC 2 cut(s) 835, 1345
DdeI CTNAG 7 cut(s) 84, 546, 553, 773, 929, 1476, 1668
DpnI GATC 9 cut(s) 612, 957, 1002, 1025, 1233, 1320, 1552, 1770, 1776
DpnII GATC 9 cut(s) 610, 955, 1000, 1023, 1231, 1318, 1550, 1768, 1774
DraI TTTAAA 1 cut(s) 750
DrdI GACNNNNNNGTC 1 cut(s) 343
DseDI GACNNNNNNGTC 1 cut(s) 343
Eam1104I CTCTTC 2 cut(s) 777, 804
EarI CTCTTC 2 cut(s) 777, 804
EciI GGCGGA 2 cut(s) 458, 1020
Ecl136II GAGCTC 1 cut(s) 35
Eco24I GRGCYC 1 cut(s) 37
Eco47I GGWCC 2 cut(s) 1480, 1485
Eco47III AGCGCT 1 cut(s) 551
Eco53kI GAGCTC 1 cut(s) 35
Eco57I CTGAAG 2 cut(s) 1620, 1626
Eco81I CCTNAGG 2 cut(s) 1476, 1668
EcoICRI GAGCTC 1 cut(s) 35
EcoNI CCTNNNNNAGG 2 cut(s) 618, 1158
EcoRI GAATTC 1 cut(s) 1046
EcoRII CCWGG 1 cut(s) 937
EcoT22I ATGCAT 1 cut(s) 10
EcoT38I GRGCYC 1 cut(s) 37
Esp3I CGTCTC 1 cut(s) 1622
FaeI CATG 9 cut(s) 136, 245, 299, 313, 445, 976, 996, 1559, 1800
FaqI GGGAC 1 cut(s) 1439
FatI CATG 9 cut(s) 132, 241, 295, 309, 441, 972, 992, 1555, 1796
FauI CCCGC 1 cut(s) 694
FbaI TGATCA 1 cut(s) 1774
FblI GTMKAC 1 cut(s) 347
Fnu4HI GCNGC 8 cut(s) 29, 149, 165, 168, 171, 323, 816, 1472
FokI GGATG 4 cut(s) 17, 715, 1125, 1764
FriOI GRGCYC 1 cut(s) 37
Fsp4HI GCNGC 8 cut(s) 29, 149, 165, 168, 171, 323, 816, 1472
FspBI CTAG 3 cut(s) 158, 263, 1422
FspI TGCGCA 1 cut(s) 174
GlaI GCGC 3 cut(s) 174, 551, 1079
GluI GCNGC 8 cut(s) 29, 149, 165, 168, 171, 323, 816, 1472
GsuI CTGGAG 3 cut(s) 347, 887, 1094
HaeII RGCGCY 1 cut(s) 553
HaeIII GGCC 2 cut(s) 485, 1718
HapII CCGG 3 cut(s) 139, 1483, 1719
HhaI GCGC 3 cut(s) 175, 552, 1080
Hin1II CATG 9 cut(s) 136, 245, 299, 313, 445, 976, 996, 1559, 1800
Hin6I GCGC 3 cut(s) 173, 550, 1078
HinP1I GCGC 3 cut(s) 173, 550, 1078
HinfI GANTC 7 cut(s) 250, 474, 511, 875, 1256, 1440, 1683
HpaII CCGG 3 cut(s) 139, 1483, 1719
HphI GGTGA 2 cut(s) 1143, 1631
Hpy166II GTNNAC 6 cut(s) 348, 665, 1118, 1369, 1392, 1428
Hpy188I TCNGA 7 cut(s) 87, 547, 887, 967, 1242, 1696, 1758
Hpy188III TCNNGA 8 cut(s) 58, 107, 139, 263, 1556, 1712, 1772, 1797
Hpy8I GTNNAC 6 cut(s) 348, 665, 1118, 1369, 1392, 1428
Hpy99I CGWCG 1 cut(s) 891
HpyAV CCTTC 7 cut(s) 296, 501, 970, 1406, 1439, 1601, 1608
HpyCH4III ACNGT 3 cut(s) 64, 362, 1709
HpyCH4IV ACGT 1 cut(s) 1105
HpyF10VI GCNNNNNNNGC 4 cut(s) 154, 170, 193, 1523
HpyF3I CTNAG 7 cut(s) 84, 546, 553, 773, 929, 1476, 1668
HpySE526I ACGT 1 cut(s) 1105
Hsp92II CATG 9 cut(s) 136, 245, 299, 313, 445, 976, 996, 1559, 1800
HspAI GCGC 3 cut(s) 173, 550, 1078
Kpn2I TCCGGA 1 cut(s) 138
Ksp22I TGATCA 1 cut(s) 1774
Kzo9I GATC 9 cut(s) 610, 955, 1000, 1023, 1231, 1318, 1550, 1768, 1774
LmnI GCTCC 5 cut(s) 40, 141, 154, 184, 1075
Lsp1109I GCAGC 7 cut(s) 40, 135, 151, 154, 157, 309, 827
LweI GCATC 5 cut(s) 7, 713, 751, 1612, 1633
MaeI CTAG 3 cut(s) 158, 263, 1422
MaeII ACGT 1 cut(s) 1105
MalI GATC 9 cut(s) 612, 957, 1002, 1025, 1233, 1320, 1552, 1770, 1776
MboI GATC 9 cut(s) 610, 955, 1000, 1023, 1231, 1318, 1550, 1768, 1774
MfeI CAATTG 1 cut(s) 39
MflI RGATCY 4 cut(s) 610, 955, 1318, 1550
MhlI GDGCHC 2 cut(s) 37, 937
MluCI AATT 7 cut(s) 39, 189, 722, 851, 1013, 1046, 1087
MluI ACGCGT 1 cut(s) 1264
MlyI GAGTC 2 cut(s) 468, 1677
MmeI TCCRAC 1 cut(s) 910
Mph1103I ATGCAT 1 cut(s) 10
MroI TCCGGA 1 cut(s) 138
MroXI GAANNNNTTC 1 cut(s) 1046
MseI TTAA 5 cut(s) 579, 749, 825, 869, 987
MspA1I CMGCKG 2 cut(s) 322, 1328
MspCI CTTAAG 1 cut(s) 986
MspI CCGG 3 cut(s) 139, 1483, 1719
MspR9I CCNGG 1 cut(s) 939
MunI CAATTG 1 cut(s) 39
Mva1269I GAATGC 1 cut(s) 1249
MvaI CCWGG 1 cut(s) 939
MvnI CGCG 3 cut(s) 429, 1080, 1266
MwoI GCNNNNNNNGC 4 cut(s) 154, 170, 193, 1523
NdeII GATC 9 cut(s) 610, 955, 1000, 1023, 1231, 1318, 1550, 1768, 1774
NlaIII CATG 9 cut(s) 136, 245, 299, 313, 445, 976, 996, 1559, 1800
NlaIV GGNNCC 2 cut(s) 936, 1320
NmeAIII GCCGAG 1 cut(s) 1378
NsbI TGCGCA 1 cut(s) 174
NsiI ATGCAT 1 cut(s) 10
NspI RCATGY 2 cut(s) 136, 299
PagI TCATGA 2 cut(s) 1555, 1796
PctI GAATGC 1 cut(s) 1249
PdmI GAANNNNTTC 1 cut(s) 1046
PfeI GAWTC 5 cut(s) 250, 511, 875, 1256, 1440
PflMI CCANNNNNTGG 2 cut(s) 325, 1328
PkrI GCNGC 8 cut(s) 30, 150, 166, 169, 172, 324, 817, 1473
PleI GAGTC 2 cut(s) 468, 1677
PpsI GAGTC 2 cut(s) 468, 1677
Psp124BI GAGCTC 1 cut(s) 37
Psp6I CCWGG 1 cut(s) 937
PspGI CCWGG 1 cut(s) 937
PspN4I GGNNCC 2 cut(s) 936, 1320
PspPI GGNCC 2 cut(s) 1480, 1485
PstI CTGCAG 1 cut(s) 153
PstNI CAGNNNCTG 1 cut(s) 325
PsuI RGATCY 4 cut(s) 610, 955, 1318, 1550
PvuII CAGCTG 2 cut(s) 322, 1328
RsaI GTAC 2 cut(s) 836, 1346
RsaNI GTAC 2 cut(s) 835, 1345
SacI GAGCTC 1 cut(s) 37
SaqAI TTAA 5 cut(s) 579, 749, 825, 869, 987
SatI GCNGC 8 cut(s) 29, 149, 165, 168, 171, 323, 816, 1472
Sau3AI GATC 9 cut(s) 610, 955, 1000, 1023, 1231, 1318, 1550, 1768, 1774
Sau96I GGNCC 2 cut(s) 1480, 1485
SchI GAGTC 2 cut(s) 468, 1677
ScrFI CCNGG 1 cut(s) 939
SduI GDGCHC 2 cut(s) 37, 937
SfaNI GCATC 5 cut(s) 7, 713, 751, 1612, 1633
SfcI CTRYAG 2 cut(s) 149, 630
SinI GGWCC 2 cut(s) 1480, 1485
SmlI CTYRAG 4 cut(s) 56, 105, 986, 1019
SmoI CTYRAG 4 cut(s) 56, 105, 986, 1019
Sse9I AATT 7 cut(s) 39, 189, 722, 851, 1013, 1046, 1087
SsiI CCGC 7 cut(s) 429, 469, 687, 702, 740, 1031, 1472
SspMI CTAG 3 cut(s) 158, 263, 1422
SstI GAGCTC 1 cut(s) 37
StyD4I CCNGG 1 cut(s) 937
TaaI ACNGT 3 cut(s) 64, 362, 1709
TaiI ACGT 1 cut(s) 1108
TaqI TCGA 3 cut(s) 878, 1443, 1728
TaqII GACCGA 1 cut(s) 353
TasI AATT 7 cut(s) 39, 189, 722, 851, 1013, 1046, 1087
TauI GCSGC 1 cut(s) 1474
TfiI GAWTC 5 cut(s) 250, 511, 875, 1256, 1440
Tru1I TTAA 5 cut(s) 579, 749, 825, 869, 987
Tru9I TTAA 5 cut(s) 579, 749, 825, 869, 987
TscAI CASTG 2 cut(s) 911, 1771
TseI GCWGC 7 cut(s) 28, 148, 164, 167, 170, 322, 815
TspDTI ATGAA 7 cut(s) 126, 368, 606, 618, 717, 989, 1572
TspGWI ACGGA 4 cut(s) 528, 1043, 1189, 1749
TspRI CASTG 2 cut(s) 911, 1771
Van91I CCANNNNNTGG 2 cut(s) 325, 1328
Vha464I CTTAAG 1 cut(s) 986
VpaK11BI GGWCC 2 cut(s) 1480, 1485
XagI CCTNNNNNAGG 2 cut(s) 618, 1158
XapI RAATTY 2 cut(s) 722, 1046
XbaI TCTAGA 1 cut(s) 262
XceI RCATGY 2 cut(s) 136, 299
XmiI GTMKAC 1 cut(s) 347
XmnI GAANNNNTTC 1 cut(s) 1046
XspI CTAG 3 cut(s) 158, 263, 1422
Zsp2I ATGCAT 1 cut(s) 10
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.