FvH4_7g03810

THO complex subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0006099
Physical Location & Seq
Forward (+)
4353489 .. 4363774
10286 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g03810.t3

Sequence Viewer

Length: 1836 bp
ATGGAAGTGTTCCGAAGTGCGATACTGCAACCAGGCCCGCCTGAAACCTTTGCGTTACAGACGGTTCAGCAAGTTATAAAGCCTCAGAAAGGGACGAAGCTGGTGCAAGATGAGAATCAACTGTTGGAAAATATCCTCCGGACATTGCTGCAGGAACTGGTGTCCTCTGCAGTGCAGTCCGGGGAGCAGATAATGCAGTATGGCCAATCAATTGATGATGGAGAAGCTACAAGAGGACATATTCCACGTCTTCTAGATGTTGTGTTGTATCTTTGTGAGAACGAGCACGTGGAAGGTGGCATGATATTTCAGCTATTGGAAGACTTGACAGAGATGTCTACTATGAGAAACTGCAAAGACGTTTTCGGTTATATAGAGAGTAAGCAAGATATATTAGGAAAGCAAGAGCTTTTTGCGAGAGGAAAACTTGTCATGTTGAGAACATGCAATCAACTCCTTCGTCGTCTATCAAAGGCAAATGATGTGGTTTTTTGCGGACGAATTCTAATGTTTCTAGCACACTTTTTCCCGTTGTCTGAGCGATCAGCTGTGAATATCAAAGGAGTCTTTAACACATCGAATGAAACAAAATATGAGAAAGATGCCCCTGATGGAATTTCCATCGATTTCAACTTTTACAAGACCTTCTGGAGCTTACAGGAATACTTTTGTAACCCTGCTCCCTTAACTGTTGCTCCTACCAAGTGGCAGAAATTTACATCCAGTTTAAAGGTTGTCTTAAATACCTTTGAAGCTCAACCATTAAGTGATGAAGAGGGAGAAGCCAATAATTTGGAGGAGTCAGCAAATTTCAGCATAAAGTATCTTACAAGCAGTAAGCTGATGGGTCTGGAGTTAAAGGATCCGAGTTTCCGACGACACATACTCGTGCAGTGCCTCATATTGTTTGATTATCTGAAGGCCCCAGGAAAAAGTGAAAAAGATTTGCCTTCTGAAAGCATGAAAGAAGAAATAAATTCTTATGAGGAGCATGTGAAGAAACTGCTTGAGATGACTCCACCAAAGGGGGAAAGTTTTCTTCATAAAATTGAACATATATTAGAACGTGAAAAGAATTGGGTATGGTGGAAACGAGATGGTTGCCCCCCATTTGAGAAGCAGCCGATTGAAAAGAAAACTGTTCAAGATGGAGCCAAAAAGCGGAAGCCGAGGTGGAGATTGGGAAATAAAGAACTCTCACAGTTGTGGAAGTGGGCAGACCAGAATCCGAATGCTTTAACTGATACTCAACGTCTTCGGACCCCTTCCATCACTGAGTACTGGAAACCCTTGGCTGAGGACATGGATCCAGCAGCTGGAATAGAAGCTGAATATCACCACAAAAATAACCGAGTTTACTGCTGGAAAGGTCTTCGATTTTCAGCTAGACAAGACTTAGAAGGGTTTTCTAAATTTACAGAATTTGGTATTGAAGGAGTGGTACCTCTAGAACTTCTGCCCCCTGAAGAACGTGCTAAATACGCTCCTAAAACAAATGAGAAGTCCAAACGTGCTAAAAAGGAAGATGCAAAGGCTGCTGTGCATCATGTAGAAGAAAATCAGGTGGCAACAGCTGCAACTGATGTAGATGGTGAAGTACTGAGAACTGATGTTGGGGCCCTCGTGGCTCCATTGGACACTGATAACACCATGGTTTGCAATACATCCCAAGGTAACAGTCCAATGGCAGATGAACATCAGAAGCAAAGTTCTGATACTGATGGTGGTCAAGAGGCAGGGCAGTTGGAAGACGATGCCGAGGTAGATGCCGAGGGGGATGCTGGGATGATTGATGGAGAGATTGAACCGGAGGTTGATTTAGATCCAGCTAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000160 GO:0000347 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006396 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008104 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009755 GO:0009873 GO:0009892 GO:0009987 GO:0010033 GO:0010267 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0015031 GO:0015833 GO:0015931 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0019222 GO:0023052 GO:0030422 GO:0031047 GO:0031050 GO:0031503 GO:0032870 GO:0032991 GO:0033036 GO:0034613 GO:0034641 GO:0035194 GO:0035556 GO:0040029 GO:0042221 GO:0042886 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046483 GO:0046907 GO:0048519 GO:0050657 GO:0050658 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051028 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051641 GO:0051649 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070727 GO:0070887 GO:0070918 GO:0071166 GO:0071310 GO:0071359 GO:0071369 GO:0071407 GO:0071426 GO:0071427 GO:0071495 GO:0071702 GO:0071704 GO:0071705 GO:0090304 GO:0098542 GO:1901360 GO:1901698 GO:1901699
KEGG Pathways
Metabolic & Signaling
ko03013 ko03040 map03013 map03040
Pfam Domains
Protein Families
efThoc1

Protein Analysis

612

Amino Acids

69.28

Weight (kDa)

5.07

Isoelectric Point (pI)

50.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
efThoc1 PF11957 68 - 490 1.3e-97 THO complex subunit 1 transcription elongation factor
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 77
AasI GACNNNNNNGTC 1 cut(s) 334
Acc65I GGTACC 1 cut(s) 1441
AccB1I GGYRCC 1 cut(s) 1441
AccB7I CCANNNNNTGG 1 cut(s) 1316
AccI GTMKAC 1 cut(s) 338
AccIII TCCGGA 1 cut(s) 138
AciI CCGC 3 cut(s) 38, 495, 1162
AclWI GGATC 5 cut(s) 857, 870, 1301, 1314, 1817
AcoI YGGCCR 1 cut(s) 202
AcsI RAATTY 7 cut(s) 501, 615, 713, 808, 976, 1412, 1421
AcuI CTGAAG 2 cut(s) 938, 1485
AcvI CACGTG 1 cut(s) 289
AfaI GTAC 3 cut(s) 1280, 1443, 1599
AfiI CCNNNNNNNGG 4 cut(s) 89, 1025, 1161, 1316
AgsI TTSAA 7 cut(s) 631, 752, 1052, 1130, 1145, 1433, 1805
AjiI CACGTC 1 cut(s) 248
AjnI CCWGG 2 cut(s) 31, 925
AjuI GAANNNNNNNTTGG 2 cut(s) 107, 139
AleI CACNNNNGTG 1 cut(s) 1204
Alw21I GWGCWC 1 cut(s) 288
AlwI GGATC 5 cut(s) 857, 870, 1301, 1314, 1817
AlwNI CAGNNNCTG 2 cut(s) 157, 1316
Aor13HI TCCGGA 1 cut(s) 138
AoxI GGCC 4 cut(s) 34, 202, 921, 1617
ApaI GGGCCC 1 cut(s) 1621
ApeKI GCWGC 5 cut(s) 148, 1120, 1313, 1535, 1574
ApoI RAATTY 7 cut(s) 501, 615, 713, 808, 976, 1412, 1421
ArsI GACNNNNNNTTYG 2 cut(s) 1487, 1519
Asp700I GAANNNNTTC 1 cut(s) 1035
Asp718I GGTACC 1 cut(s) 1441
AspS9I GGNCC 5 cut(s) 35, 922, 1260, 1617, 1618
AsuC2I CCSGG 1 cut(s) 181
AsuHPI GGTGA 2 cut(s) 1328, 1604
AsuNHI GCTAGC 1 cut(s) 1829
AvaII GGWCC 1 cut(s) 1260
BaeGI GKGCMC 1 cut(s) 1621
BalI TGGCCA 1 cut(s) 204
BamHI GGATCC 2 cut(s) 862, 1306
BanI GGYRCC 1 cut(s) 1441
BanII GRGCYC 1 cut(s) 1621
BarI GAAGNNNNNNTAC 2 cut(s) 1425, 1457
BauI CACGAG 2 cut(s) 887, 1622
BbrPI CACGTG 1 cut(s) 289
BbsI GAAGAC 5 cut(s) 242, 327, 1247, 1364, 1755
Bbv12I GWGCWC 1 cut(s) 288
BbvCI CCTCAGC 1 cut(s) 1296
BbvI GCAGC 5 cut(s) 135, 1132, 1325, 1522, 1561
BciT130I CCWGG 2 cut(s) 33, 927
BcnI CCSGG 1 cut(s) 181
BfaI CTAG 5 cut(s) 254, 515, 1386, 1448, 1830
BfmI CTRYAG 2 cut(s) 149, 168
BglI GCCNNNNNGGC 1 cut(s) 1625
BisI GCNGC 5 cut(s) 149, 1121, 1314, 1536, 1575
BlsI GCNGC 5 cut(s) 150, 1122, 1315, 1537, 1576
BmcAI AGTACT 2 cut(s) 1280, 1599
Bme1390I CCNGG 3 cut(s) 33, 181, 927
Bme18I GGWCC 1 cut(s) 1260
BmgBI CACGTC 1 cut(s) 248
BmgT120I GGNCC 5 cut(s) 35, 922, 1260, 1617, 1618
BmiI GGNNCC 9 cut(s) 864, 924, 1153, 1262, 1308, 1443, 1618, 1619, 1629
BmrFI CCNGG 3 cut(s) 33, 181, 927
BmsI GCATC 6 cut(s) 592, 1516, 1552, 1744, 1756, 1768
BmtI GCTAGC 1 cut(s) 1833
BpiI GAAGAC 5 cut(s) 242, 327, 1247, 1364, 1755
BpmI CTGGAG 2 cut(s) 670, 872
Bpu10I CCTNAGC 1 cut(s) 1296
BpuEI CTTGAG 1 cut(s) 1028
BpuMI CCSGG 1 cut(s) 181
Bsa29I ATCGAT 1 cut(s) 624
BsaAI YACGTR 1 cut(s) 289
BsaBI GATNNNNATC 3 cut(s) 114, 1695, 1821
BsaJI CCNNGG 8 cut(s) 180, 925, 1169, 1290, 1650, 1669, 1758, 1770
BsaWI WCCGGW 2 cut(s) 138, 1807
BsaXI ACNNNNNCTCC 2 cut(s) 679, 709
Bsc4I CCNNNNNNNGG 4 cut(s) 89, 1025, 1161, 1316
Bse1I ACTGG 3 cut(s) 162, 723, 1286
Bse3DI GCAATG 1 cut(s) 143
Bse8I GATNNNNATC 3 cut(s) 114, 1695, 1821
BseAI TCCGGA 1 cut(s) 138
BseBI CCWGG 2 cut(s) 33, 927
BseCI ATCGAT 1 cut(s) 624
BseDI CCNNGG 8 cut(s) 180, 925, 1169, 1290, 1650, 1669, 1758, 1770
BseGI GGATG 4 cut(s) 719, 1664, 1783, 1791
BseJI GATNNNNATC 3 cut(s) 114, 1695, 1821
BseLI CCNNNNNNNGG 4 cut(s) 89, 1025, 1161, 1316
BseMI GCAATG 1 cut(s) 143
BseMII CTCAG 5 cut(s) 98, 528, 1266, 1287, 1592
BseNI ACTGG 3 cut(s) 162, 723, 1286
BseRI GAGGAG 2 cut(s) 812, 1001
BseSI GKGCMC 1 cut(s) 1621
BseXI GCAGC 5 cut(s) 135, 1132, 1325, 1522, 1561
BseYI CCCAGC 1 cut(s) 1781
BsgI GTGCAG 2 cut(s) 194, 911
BshFI GGCC 4 cut(s) 36, 204, 923, 1619
BshNI GGYRCC 1 cut(s) 1441
BshVI ATCGAT 1 cut(s) 624
BsiHKAI GWGCWC 1 cut(s) 288
BsiSI CCGG 3 cut(s) 139, 180, 1808
BslFI GGGAC 1 cut(s) 106
BslI CCNNNNNNNGG 4 cut(s) 89, 1025, 1161, 1316
BsmFI GGGAC 1 cut(s) 106
BsmI GAATGC 1 cut(s) 1237
BsnI GGCC 4 cut(s) 36, 204, 923, 1619
Bsp120I GGGCCC 1 cut(s) 1617
Bsp1286I GDGCHC 2 cut(s) 288, 1621
Bsp13I TCCGGA 1 cut(s) 138
Bsp143I GATC 4 cut(s) 542, 862, 1306, 1822
Bsp19I CCATGG 1 cut(s) 1650
BspACI CCGC 3 cut(s) 38, 495, 1162
BspANI GGCC 4 cut(s) 36, 204, 923, 1619
BspCNI CTCAG 5 cut(s) 97, 529, 1267, 1288, 1593
BspDI ATCGAT 1 cut(s) 624
BspEI TCCGGA 1 cut(s) 138
BspLI GGNNCC 9 cut(s) 864, 924, 1153, 1262, 1308, 1443, 1618, 1619, 1629
BspMAI CTGCAG 2 cut(s) 153, 172
BspOI GCTAGC 1 cut(s) 1833
BspPI GGATC 5 cut(s) 857, 870, 1301, 1314, 1817
BspT107I GGYRCC 1 cut(s) 1441
BsrDI GCAATG 1 cut(s) 143
BsrI ACTGG 3 cut(s) 162, 723, 1286
BssECI CCNNGG 8 cut(s) 180, 925, 1169, 1290, 1650, 1669, 1758, 1770
BssMI GATC 4 cut(s) 542, 862, 1306, 1822
BssSI CACGAG 2 cut(s) 887, 1622
BssT1I CCWWGG 3 cut(s) 1290, 1650, 1669
Bst2BI CACGAG 2 cut(s) 887, 1622
Bst2UI CCWGG 2 cut(s) 33, 927
Bst4CI ACNGT 6 cut(s) 64, 123, 691, 1141, 1203, 1679
Bst6I CTCTTC 1 cut(s) 768
BstAPI GCANNNNNTGC 3 cut(s) 193, 1535, 1574
BstBAI YACGTR 1 cut(s) 289
BstC8I GCNNGC 2 cut(s) 38, 1831
BstDEI CTNAG 6 cut(s) 84, 537, 1275, 1296, 1396, 1601
BstDSI CCRYGG 1 cut(s) 1650
BstENI CCTNNNNNAGG 1 cut(s) 87
BstF5I GGATG 4 cut(s) 719, 1664, 1783, 1791
BstKTI GATC 4 cut(s) 545, 865, 1309, 1825
BstMBI GATC 4 cut(s) 542, 862, 1306, 1822
BstMWI GCNNNNNNNGC 5 cut(s) 193, 1481, 1535, 1574, 1625
BstNI CCWGG 2 cut(s) 33, 927
BstNSI RCATGY 2 cut(s) 447, 995
BstSCI CCNGG 3 cut(s) 31, 179, 925
BstSFI CTRYAG 2 cut(s) 149, 168
BstSLI GKGCMC 1 cut(s) 1621
BstV1I GCAGC 5 cut(s) 135, 1132, 1325, 1522, 1561
BstV2I GAAGAC 5 cut(s) 242, 327, 1247, 1364, 1755
BstX2I RGATCY 3 cut(s) 862, 1306, 1822
BstXI CCANNNNNNTGG 1 cut(s) 793
BstYI RGATCY 3 cut(s) 862, 1306, 1822
Bsu15I ATCGAT 1 cut(s) 624
BsuRI GGCC 4 cut(s) 36, 204, 923, 1619
BsuTUI ATCGAT 1 cut(s) 624
BtgI CCRYGG 1 cut(s) 1650
BtrI CACGTC 1 cut(s) 248
BtsCI GGATG 4 cut(s) 719, 1664, 1783, 1791
BtsI GCAGTG 2 cut(s) 177, 899
BtsIMutI CAGTG 4 cut(s) 177, 899, 1272, 1638
Cac8I GCNNGC 2 cut(s) 38, 1831
CaiI CAGNNNCTG 2 cut(s) 157, 1316
Cfr13I GGNCC 5 cut(s) 35, 922, 1260, 1617, 1618
ClaI ATCGAT 1 cut(s) 624
Csp6I GTAC 3 cut(s) 1279, 1442, 1598
CspCI CAANNNNNGTGG 2 cut(s) 465, 500
CviAII CATG 8 cut(s) 301, 433, 444, 961, 992, 1303, 1547, 1651
CviQI GTAC 3 cut(s) 1279, 1442, 1598
DdeI CTNAG 6 cut(s) 84, 537, 1275, 1296, 1396, 1601
DpnI GATC 4 cut(s) 544, 864, 1308, 1824
DpnII GATC 4 cut(s) 542, 862, 1306, 1822
DraI TTTAAA 1 cut(s) 729
DrdI GACNNNNNNGTC 1 cut(s) 334
DseDI GACNNNNNNGTC 1 cut(s) 334
EaeI YGGCCR 1 cut(s) 202
Eam1104I CTCTTC 1 cut(s) 768
EarI CTCTTC 1 cut(s) 768
Eco130I CCWWGG 3 cut(s) 1290, 1650, 1669
Eco24I GRGCYC 1 cut(s) 1621
Eco47I GGWCC 1 cut(s) 1260
Eco57I CTGAAG 2 cut(s) 938, 1485
Eco72I CACGTG 1 cut(s) 289
EcoNI CCTNNNNNAGG 1 cut(s) 87
EcoO109I RGGNCCY 3 cut(s) 922, 1617, 1618
EcoRI GAATTC 1 cut(s) 501
EcoRII CCWGG 2 cut(s) 31, 925
EcoT14I CCWWGG 3 cut(s) 1290, 1650, 1669
EcoT38I GRGCYC 1 cut(s) 1621
ErhI CCWWGG 3 cut(s) 1290, 1650, 1669
FaeI CATG 8 cut(s) 304, 436, 447, 964, 995, 1306, 1550, 1654
FalI AAGNNNNNCTT 2 cut(s) 722, 754
FaqI GGGAC 1 cut(s) 106
FatI CATG 8 cut(s) 300, 432, 443, 960, 991, 1302, 1546, 1650
FauI CCCGC 1 cut(s) 45
FblI GTMKAC 1 cut(s) 338
Fnu4HI GCNGC 5 cut(s) 149, 1121, 1314, 1536, 1575
FokI GGATG 4 cut(s) 706, 1651, 1790, 1798
FriOI GRGCYC 1 cut(s) 1621
Fsp4HI GCNGC 5 cut(s) 149, 1121, 1314, 1536, 1575
FspBI CTAG 5 cut(s) 254, 515, 1386, 1448, 1830
GluI GCNGC 5 cut(s) 149, 1121, 1314, 1536, 1575
GsaI CCCAGC 1 cut(s) 1785
GsuI CTGGAG 2 cut(s) 670, 872
HaeIII GGCC 4 cut(s) 36, 204, 923, 1619
HapII CCGG 3 cut(s) 139, 180, 1808
Hin1II CATG 8 cut(s) 304, 436, 447, 964, 995, 1306, 1550, 1654
HinfI GANTC 5 cut(s) 115, 564, 800, 1015, 1225
HpaII CCGG 3 cut(s) 139, 180, 1808
HphI GGTGA 2 cut(s) 1328, 1604
Hpy166II GTNNAC 2 cut(s) 339, 1357
Hpy188III TCNNGA 7 cut(s) 139, 254, 649, 851, 1145, 1448, 1730
Hpy8I GTNNAC 2 cut(s) 339, 1357
Hpy99I CGWCG 2 cut(s) 465, 879
HpyAV CCTTC 8 cut(s) 287, 467, 655, 913, 960, 1275, 1394, 1427
HpyCH4III ACNGT 6 cut(s) 64, 123, 691, 1141, 1203, 1679
HpyCH4IV ACGT 7 cut(s) 247, 288, 360, 1066, 1252, 1471, 1510
HpyF10VI GCNNNNNNNGC 5 cut(s) 193, 1481, 1535, 1574, 1625
HpyF3I CTNAG 6 cut(s) 84, 537, 1275, 1296, 1396, 1601
HpySE526I ACGT 7 cut(s) 247, 288, 360, 1066, 1252, 1471, 1510
Hsp92II CATG 8 cut(s) 304, 436, 447, 964, 995, 1306, 1550, 1654
Kpn2I TCCGGA 1 cut(s) 138
KpnI GGTACC 1 cut(s) 1445
Kzo9I GATC 4 cut(s) 542, 862, 1306, 1822
LmnI GCTCC 8 cut(s) 184, 651, 685, 700, 988, 1151, 1489, 1633
Lsp1109I GCAGC 5 cut(s) 135, 1132, 1325, 1522, 1561
LweI GCATC 6 cut(s) 592, 1516, 1552, 1744, 1756, 1768
MaeI CTAG 5 cut(s) 254, 515, 1386, 1448, 1830
MaeII ACGT 7 cut(s) 247, 288, 360, 1066, 1252, 1471, 1510
MaeIII GTNAC 3 cut(s) 54, 671, 1673
MalI GATC 4 cut(s) 544, 864, 1308, 1824
MboI GATC 4 cut(s) 542, 862, 1306, 1822
MfeI CAATTG 1 cut(s) 210
MflI RGATCY 3 cut(s) 862, 1306, 1822
MhlI GDGCHC 2 cut(s) 288, 1621
MlsI TGGCCA 1 cut(s) 204
MluNI TGGCCA 1 cut(s) 204
MlyI GAGTC 3 cut(s) 573, 809, 1009
MmeI TCCRAC 3 cut(s) 105, 898, 1725
Mox20I TGGCCA 1 cut(s) 204
MroI TCCGGA 1 cut(s) 138
MroXI GAANNNNTTC 1 cut(s) 1035
MscI TGGCCA 1 cut(s) 204
MseI TTAA 7 cut(s) 570, 686, 728, 740, 764, 857, 1238
MslI CAYNNNNRTG 2 cut(s) 887, 1204
Msp20I TGGCCA 1 cut(s) 204
MspA1I CMGCKG 3 cut(s) 548, 1316, 1574
MspI CCGG 3 cut(s) 139, 180, 1808
MspR9I CCNGG 3 cut(s) 33, 181, 927
MunI CAATTG 1 cut(s) 210
Mva1269I GAATGC 1 cut(s) 1237
MvaI CCWGG 2 cut(s) 33, 927
MwoI GCNNNNNNNGC 5 cut(s) 193, 1481, 1535, 1574, 1625
NciI CCSGG 1 cut(s) 181
NcoI CCATGG 1 cut(s) 1650
NdeII GATC 4 cut(s) 542, 862, 1306, 1822
NheI GCTAGC 1 cut(s) 1829
NlaIII CATG 8 cut(s) 304, 436, 447, 964, 995, 1306, 1550, 1654
NlaIV GGNNCC 9 cut(s) 864, 924, 1153, 1262, 1308, 1443, 1618, 1619, 1629
NmeAIII GCCGAG 3 cut(s) 1194, 1783, 1795
NspI RCATGY 2 cut(s) 447, 995
OliI CACNNNNGTG 1 cut(s) 1204
PctI GAATGC 1 cut(s) 1237
PdmI GAANNNNTTC 1 cut(s) 1035
PfeI GAWTC 2 cut(s) 115, 1225
PflMI CCANNNNNTGG 1 cut(s) 1316
PkrI GCNGC 5 cut(s) 150, 1122, 1315, 1537, 1576
PleI GAGTC 3 cut(s) 572, 808, 1009
PmaCI CACGTG 1 cut(s) 289
PmlI CACGTG 1 cut(s) 289
PpsI GAGTC 3 cut(s) 572, 808, 1009
Ppu21I YACGTR 1 cut(s) 289
PsiI TTATAA 1 cut(s) 77
Psp6I CCWGG 2 cut(s) 31, 925
PspCI CACGTG 1 cut(s) 289
PspFI CCCAGC 1 cut(s) 1781
PspGI CCWGG 2 cut(s) 31, 925
PspN4I GGNNCC 9 cut(s) 864, 924, 1153, 1262, 1308, 1443, 1618, 1619, 1629
PspOMI GGGCCC 1 cut(s) 1617
PspPI GGNCC 5 cut(s) 35, 922, 1260, 1617, 1618
PstI CTGCAG 2 cut(s) 153, 172
PstNI CAGNNNCTG 2 cut(s) 157, 1316
PsuI RGATCY 3 cut(s) 862, 1306, 1822
PvuII CAGCTG 3 cut(s) 548, 1316, 1574
RsaI GTAC 3 cut(s) 1280, 1443, 1599
RsaNI GTAC 3 cut(s) 1279, 1442, 1598
RseI CAYNNNNRTG 2 cut(s) 887, 1204
SaqAI TTAA 7 cut(s) 570, 686, 728, 740, 764, 857, 1238
SatI GCNGC 5 cut(s) 149, 1121, 1314, 1536, 1575
Sau3AI GATC 4 cut(s) 542, 862, 1306, 1822
Sau96I GGNCC 5 cut(s) 35, 922, 1260, 1617, 1618
ScaI AGTACT 2 cut(s) 1280, 1599
SchI GAGTC 3 cut(s) 573, 809, 1009
ScrFI CCNGG 3 cut(s) 33, 181, 927
SduI GDGCHC 2 cut(s) 288, 1621
SfaNI GCATC 6 cut(s) 592, 1516, 1552, 1744, 1756, 1768
SfcI CTRYAG 2 cut(s) 149, 168
SinI GGWCC 1 cut(s) 1260
SmiMI CAYNNNNRTG 2 cut(s) 887, 1204
SmlI CTYRAG 1 cut(s) 1007
SmoI CTYRAG 1 cut(s) 1007
SsiI CCGC 3 cut(s) 38, 495, 1162
SspMI CTAG 5 cut(s) 254, 515, 1386, 1448, 1830
StyD4I CCNGG 3 cut(s) 31, 179, 925
StyI CCWWGG 3 cut(s) 1290, 1650, 1669
TaaI ACNGT 6 cut(s) 64, 123, 691, 1141, 1203, 1679
TaiI ACGT 7 cut(s) 250, 291, 363, 1069, 1255, 1474, 1513
TaqI TCGA 3 cut(s) 578, 624, 1375
TatI WGTACW 2 cut(s) 1278, 1597
TfiI GAWTC 2 cut(s) 115, 1225
Tru1I TTAA 7 cut(s) 570, 686, 728, 740, 764, 857, 1238
Tru9I TTAA 7 cut(s) 570, 686, 728, 740, 764, 857, 1238
TscAI CASTG 4 cut(s) 177, 899, 1279, 1645
TseI GCWGC 5 cut(s) 148, 1120, 1313, 1535, 1574
TspDTI ATGAA 5 cut(s) 597, 786, 977, 1031, 1707
TspRI CASTG 4 cut(s) 177, 899, 1279, 1645
Van91I CCANNNNNTGG 1 cut(s) 1316
VpaK11BI GGWCC 1 cut(s) 1260
XagI CCTNNNNNAGG 1 cut(s) 87
XapI RAATTY 7 cut(s) 501, 615, 713, 808, 976, 1412, 1421
XbaI TCTAGA 2 cut(s) 253, 1447
XceI RCATGY 2 cut(s) 447, 995
XmiI GTMKAC 1 cut(s) 338
XmnI GAANNNNTTC 1 cut(s) 1035
XspI CTAG 5 cut(s) 254, 515, 1386, 1448, 1830
ZrmI AGTACT 2 cut(s) 1280, 1599
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.