AT5G17522

Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
5775535 .. 5776346
812 bp
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UTR
Exon/CDS
Intron
AT5G17522.1

Sequence Viewer

Length: 234 bp
ATGGAAGGAAAGGTTTTCCAAAACTTTAATGTAGTACAGAGCTGCTACCGACAAAATAAGCAGTTTAAGACACGATACCAAAGAGAACCTGACCTGTTCATGTCTACTTTACTTCCCTGTCCAAGAGAGAAGATGGCATTTAACCTCAACTCTTCCATGCGTGCCCACACTTTGTCTAAATACCAGTTTGTTCTTTCAAAGCAAAGAACTTTTTACTGCAATGGTCCGTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

77

Amino Acids

9.26

Weight (kDa)

9.88

Isoelectric Point (pI)

42.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 104
AfaI GTAC 1 cut(s) 36
AgsI TTSAA 1 cut(s) 198
AluBI AGCT 1 cut(s) 42
AluI AGCT 1 cut(s) 42
ApeKI GCWGC 1 cut(s) 42
AspS9I GGNCC 1 cut(s) 224
AvaII GGWCC 1 cut(s) 224
BaeGI GKGCMC 1 cut(s) 166
BbvI GCAGC 1 cut(s) 29
BccI CCATC 1 cut(s) 127
BfaI CTAG 1 cut(s) 232
BisI GCNGC 1 cut(s) 43
BlsI GCNGC 1 cut(s) 44
Bme18I GGWCC 1 cut(s) 224
BmgT120I GGNCC 1 cut(s) 224
Bse1I ACTGG 1 cut(s) 184
Bse3DI GCAATG 1 cut(s) 226
BseMI GCAATG 1 cut(s) 226
BseNI ACTGG 1 cut(s) 184
BseSI GKGCMC 1 cut(s) 166
BseXI GCAGC 1 cut(s) 29
Bsp1286I GDGCHC 1 cut(s) 166
BsrDI GCAATG 1 cut(s) 226
BsrI ACTGG 1 cut(s) 184
Bst6I CTCTTC 1 cut(s) 157
BstC8I GCNNGC 1 cut(s) 162
BstSLI GKGCMC 1 cut(s) 166
BstV1I GCAGC 1 cut(s) 29
Cac8I GCNNGC 1 cut(s) 162
Cfr13I GGNCC 1 cut(s) 224
Csp6I GTAC 1 cut(s) 35
CviAII CATG 2 cut(s) 100, 157
CviJI RGCY 1 cut(s) 42
CviKI_1 RGCY 1 cut(s) 42
CviQI GTAC 1 cut(s) 35
Eam1104I CTCTTC 1 cut(s) 157
EarI CTCTTC 1 cut(s) 157
Eco47I GGWCC 1 cut(s) 224
FaeI CATG 2 cut(s) 103, 160
FaiI YATR 2 cut(s) 101, 158
FatI CATG 2 cut(s) 99, 156
FblI GTMKAC 1 cut(s) 104
Fnu4HI GCNGC 1 cut(s) 43
Fsp4HI GCNGC 1 cut(s) 43
FspBI CTAG 1 cut(s) 232
GluI GCNGC 1 cut(s) 43
Hin1II CATG 2 cut(s) 103, 160
Hpy166II GTNNAC 1 cut(s) 105
Hpy8I GTNNAC 1 cut(s) 105
HpyCH4V TGCA 1 cut(s) 219
Hsp92II CATG 2 cut(s) 103, 160
LpnPI CCDG 4 cut(s) 102, 107, 130, 197
Lsp1109I GCAGC 1 cut(s) 29
MaeI CTAG 1 cut(s) 232
MboII GAAGA 2 cut(s) 142, 144
MhlI GDGCHC 1 cut(s) 166
MnlI CCTC 1 cut(s) 155
MseI TTAA 3 cut(s) 27, 66, 141
NlaIII CATG 2 cut(s) 103, 160
PkrI GCNGC 1 cut(s) 44
PspPI GGNCC 1 cut(s) 224
RsaI GTAC 1 cut(s) 36
RsaNI GTAC 1 cut(s) 35
SaqAI TTAA 3 cut(s) 27, 66, 141
SatI GCNGC 1 cut(s) 43
Sau96I GGNCC 1 cut(s) 224
SduI GDGCHC 1 cut(s) 166
SetI ASST 5 cut(s) 15, 44, 91, 96, 147
SgeI CNNG 9 cut(s) 84, 101, 106, 112, 129, 135, 169, 173, 196
SinI GGWCC 1 cut(s) 224
SspMI CTAG 1 cut(s) 232
TatI WGTACW 1 cut(s) 34
Tru1I TTAA 3 cut(s) 27, 66, 141
Tru9I TTAA 3 cut(s) 27, 66, 141
TseI GCWGC 1 cut(s) 42
TspDTI ATGAA 1 cut(s) 88
TspGWI ACGGA 1 cut(s) 216
VpaK11BI GGWCC 1 cut(s) 224
XmiI GTMKAC 1 cut(s) 104
XspI CTAG 1 cut(s) 232
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.