Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008624

Physical Location & Seq

Genomic Coordinates Forward (+)

6673874 .. 6676931

Gene Structure 3058 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G19740.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2046 bp

ATGTCGAAATCAAAATCTCTAGCCTTCGTAATCGCTGCTTTATCTTACTCCTTCTTCTCCCTCTTCTCTTCTCCACCAAAGTCTCACTACCACGAGCTCTTCATCTCCACTTCCTTCTCCGACAACGCTTCCGTCGCTCTAAACCTCCACACCCTCACGCGCCGCCCTCATGTAGCCGGTACAGTGGCCAACGCTGAAGCAGCGGAATATGTTCGCTCTGTTTTCACCTCCTCTGCTCTCAAATCACACGTCGTTGCTTACCAAGTGTCTCTAACTTACCCAGTTCATCGCTCTTTGGTACTAACGCCGACAGACTCTGCAAAGCCAATCACTTTCTTGCTGGAACAAGAAAAACTCGGAGACAATCCTTATGCTAATGAAGTGATGCCTACTTTTCATGGATACGCTAAGTCAGGTAACGTTTCAGGTCCAGTGGTTTATGCAAACTATGGACGAGTGGAAGATTTCGTGAGACTCAAGAAAGATATGGGCGTGAATGTCTCTGGAGCCGTTGTAATCGCGAGGTACGGTCAGATATACAGAGGAGACATTGTGAAGAACGCTTACGAGGCAGGAGCTGTAGGGGTTGTGATATATACTGATAAGAGAGATTACGGCGGAGATGAGTGGTTTCCGGCGAGTAAATGGATGCCACCGAGTGGGGTTCAAGTTGGTACTGTTTATAATGGGTTAGGTGATCCAACGACTCCTGGATGGGCAAGTGTTGATGGGTGTGAGAGATTATCGGACGAGGCGGTTGAATTGAGCGGTGATGTTCCGCTTATACCGTCGTTGCCTGTCTCAGCTGCTGATGCTGAAGTGATTCTGAAGACAGTTGTTGGAGATGTTTCTGATGGAGATGTTTATCCAGTGGGGCCTGGACCTGGGGTCTTGAACCTCAGCTACATTGGGGAAACTGTTATTGCCAAGATTGAGAATGTTATTGGAGTGATTGAAGGAGAAGAAGAGCCTGATAGATATGTGATTCTTGGGAACCATAGAGACGCTTGGACTTTTGGAGCTGTTGATCCGAACAGTGGCACTGCGGTACTTATGGAGATTGCACAAAGACTAGATAAGCTGCAGAAAAGAGGATGGAAGCCTCGAAGGACGATTATTCTGTGTAATTGGGATGCTGAGGAGTATGGCCTGATTGGGTCAACAGAATGGGTAGAAGAAAATAGAGAGATGTTAAGTTCGAGAGCAGTGGCCTACTTGAATGTAGATTGTGCGGTATCTGGCCCTGGATTTCATGCCTCTGCGACTCCACAACTAGATGAATTGATCAAAGTAGCTGCTCAAGAGGTCCGGGATCCAGATAACGCAACGCAAACAATCTATGAATCGTGGATAGGATCAAGCGACTCTGTTGTAATCAGGAGATTAGGGGGCGGAGGTTCGGATTATGCATCATTTGTACAACATGTTGGTGTTCCAGGAGTTGACATGTCCTTTGGACGAGGCTATCCAGTATATCACTCTATGTATGATGACTTCACTTGGATGGAAAAGTTTGGTGATCCGATGTTTCAGCGACATGTCGCAATGGCTAGTGTTCTTGGTTTGGTCGCTCTTCGGTTAGCAGATGAGGAAATTATACCATTCAACTATACTTCCTATGCATTAGAACTCAAGAAAAGCGCGGAAGATTTGGAGAATGAGAAGTTAGGACATAACATAGATGTTTCTACGTTGATCAAGTCGATAGAAGATCTATCTACGGCTGCAAAACATATATCCCTAGAGAAAGAGGCAATTAAAGGAGCTCTTAAAGTGAGAGAGCTTAATGACAGATTAATGATGGCAGAACGAGCTTTAACAGACCGAGATGGACTCTCTGAAAGACCATGGTACAAGCATTTGATATACGGACCATCGAAGTACGATGACTACGGATCGAAATCATTCCCTGGAGTTGATGATGCAATTGACAATGCAAAGAAGCTAAACACAAAAGCATCTTGGGAAAATGTTCAACACCAGATTTGGAGAGTCTCTAGAGCTATTAGACATGCTTCACTTGTTTTAAAAGGTGAACTGATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005783 GO:0008150 GO:0009888 GO:0010073 GO:0012505 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048507 GO:0048856

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PA Peptidase_M28 TFR_dimer

Protein Analysis

681

Amino Acids

74.74

Weight (kDa)

5.29

Isoelectric Point (pI)

31.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PA	PF02225	141 - 223	9.5e-10	PA domain
Peptidase_M28	PF04389	313 - 500	2.6e-25	Peptidase family M28
TFR_dimer	PF04253	560 - 676	3.9e-31	Transferrin receptor-like dimerisation domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008624)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19740
fragaria_vesca	FvH4_1g06360 FvH4_1g06360 FvH4_6g31420 FvH4_6g31420 FvH4_6g31420
malus_domestica	MD02G1067100.v1.1 MD02G1067200.v1.1
prunus_persica	Prupe.7G218300_v2.0.a1 Prupe.7G218300_v2.0.a1 Prupe.7G218300_v2.0.a1
pyrus_communis	pycom02g05310
rosa_chinensis	RchiOBHm_Chr2g0092051
rosa_laevigata	RLG00000016272
rosa_multiflora	Rmu_sc0000524.1_g000005
rosa_roxburghii	Rroxscaffold_2G00149510
rosa_rugosa	Rorug02G0022600 Rorug02G0022700
rosa_samantha	Rh2AG068300 Rh2BG067600 Rh2CG068900 Rh2DG067200
rosa_wichuraiana	Rw2G005290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	684
AccB7I	CCANNNNNTGG	1 cut(s)	659
AccBSI	CCGCTC	1 cut(s)	768
AccII	CGCG	3 cut(s)	160, 521, 1643
AclI	AACGTT	1 cut(s)	420
AclWI	GGATC	7 cut(s)	692, 1022, 1307, 1320, 1363, 1514, 1903
AcoI	YGGCCR	1 cut(s)	186
AcuI	CTGAAG	3 cut(s)	216, 837, 848
AdeI	CACNNNGTG	1 cut(s)	659
AfaI	GTAC	8 cut(s)	181, 300, 527, 676, 1050, 1419, 1853, 1883
AfiI	CCNNNNNNNGG	3 cut(s)	659, 884, 1037
AflIII	ACRYGT	4 cut(s)	247, 1423, 1446, 1537
AgsI	TTSAA	7 cut(s)	668, 761, 895, 956, 1219, 1606, 1976
AhdI	GACNNNNNGTC	1 cut(s)	887
AjiI	CACGTC	1 cut(s)	250
AjnI	CCWGG	6 cut(s)	709, 877, 883, 1243, 1435, 1909
Alw21I	GWGCWC	2 cut(s)	99, 1768
Alw26I	GTCTC	9 cut(s)	87, 273, 354, 466, 505, 540, 805, 996, 1999
AlwI	GGATC	7 cut(s)	692, 1022, 1307, 1320, 1363, 1514, 1903
AlwNI	CAGNNNCTG	3 cut(s)	317, 578, 809
AoxI	GGCC	5 cut(s)	186, 875, 1147, 1209, 1240
ApeKI	GCWGC	6 cut(s)	35, 200, 806, 1081, 1295, 1724
ArsI	GACNNNNNNTTYG	4 cut(s)	234, 266, 1436, 1468
AseI	ATTAAT	1 cut(s)	1796
Asp700I	GAANNNNTTC	4 cut(s)	210, 822, 1904, 1971
AspLEI	GCGC	2 cut(s)	162, 1643
AspS9I	GGNCC	6 cut(s)	428, 875, 881, 1241, 1306, 1871
AsuC2I	CCSGG	1 cut(s)	1310
AsuHPI	GGTGA	5 cut(s)	217, 707, 782, 1529, 2045
AvaII	GGWCC	4 cut(s)	428, 881, 1306, 1871
BalI	TGGCCA	1 cut(s)	188
BamHI	GGATCC	1 cut(s)	1312
BanII	GRGCYC	2 cut(s)	99, 1768
BarI	GAAGNNNNNNTAC	4 cut(s)	548, 580, 1478, 1510
BauI	CACGAG	1 cut(s)	92
BbsI	GAAGAC	1 cut(s)	836
Bbv12I	GWGCWC	2 cut(s)	99, 1768
BbvCI	CCTCAGC	2 cut(s)	899, 1137
BbvI	GCAGC	6 cut(s)	22, 212, 793, 1068, 1282, 1711
BccI	CCATC	8 cut(s)	708, 722, 848, 1089, 1498, 1795, 1823, 1882
BceAI	ACGGC	3 cut(s)	494, 631, 1737
BciT130I	CCWGG	6 cut(s)	711, 879, 885, 1245, 1437, 1911
BciVI	GTATCC	1 cut(s)	395
BclI	TGATCA	2 cut(s)	1284, 1695
BcnI	CCSGG	1 cut(s)	1310
BcoDI	GTCTC	9 cut(s)	87, 273, 354, 466, 505, 540, 805, 996, 1999
BfaI	CTAG	6 cut(s)	20, 1073, 1274, 1551, 1742, 1998
BfmI	CTRYAG	2 cut(s)	579, 1082
BfuI	GTATCC	1 cut(s)	395
BglII	AGATCT	1 cut(s)	1711
BisI	GCNGC	7 cut(s)	36, 163, 201, 807, 1082, 1296, 1725
BlsI	GCNGC	7 cut(s)	37, 164, 202, 808, 1083, 1297, 1726
Bme1390I	CCNGG	7 cut(s)	711, 879, 885, 1245, 1310, 1437, 1911
Bme18I	GGWCC	4 cut(s)	428, 881, 1306, 1871
BmeRI	GACNNNNNGTC	1 cut(s)	887
BmgBI	CACGTC	1 cut(s)	250
BmgT120I	GGNCC	6 cut(s)	428, 875, 881, 1241, 1306, 1871
BmiI	GGNNCC	4 cut(s)	508, 876, 995, 1314
BmrFI	CCNGG	7 cut(s)	711, 879, 885, 1245, 1310, 1437, 1911
BmrI	ACTGGG	1 cut(s)	275
BmsI	GCATC	7 cut(s)	375, 639, 802, 1123, 1418, 1912, 1967
BmuI	ACTGGG	1 cut(s)	275
BpiI	GAAGAC	1 cut(s)	836
BplI	GAGNNNNNCTC	2 cut(s)	1818, 1850
BpmI	CTGGAG	2 cut(s)	525, 1932
Bpu10I	CCTNAGC	2 cut(s)	899, 1137
BpuEI	CTTGAG	3 cut(s)	461, 1284, 1616
BpuMI	CCSGG	1 cut(s)	1310
BsaBI	GATNNNNATC	2 cut(s)	864, 1900
BsaJI	CCNNGG	4 cut(s)	884, 1243, 1847, 1909
BsaXI	ACNNNNNCTCC	4 cut(s)	498, 528, 537, 567
Bsc4I	CCNNNNNNNGG	3 cut(s)	659, 884, 1037
Bse118I	RCCGGY	1 cut(s)	176
Bse1I	ACTGG	4 cut(s)	281, 431, 869, 1469
Bse3DI	GCAATG	1 cut(s)	1551
Bse8I	GATNNNNATC	2 cut(s)	864, 1900
BseBI	CCWGG	6 cut(s)	711, 879, 885, 1245, 1437, 1911
BseDI	CCNNGG	4 cut(s)	884, 1243, 1847, 1909
BseGI	GGATG	5 cut(s)	654, 719, 1100, 1138, 1509
BseJI	GATNNNNATC	2 cut(s)	864, 1900
BseLI	CCNNNNNNNGG	3 cut(s)	659, 884, 1037
BseMI	GCAATG	1 cut(s)	1551
BseMII	CTCAG	3 cut(s)	816, 913, 1128
BseNI	ACTGG	4 cut(s)	281, 431, 869, 1469
BseRI	GAGGAG	3 cut(s)	220, 558, 1154
BseXI	GCAGC	6 cut(s)	22, 212, 793, 1068, 1282, 1711
Bsh1236I	CGCG	3 cut(s)	160, 521, 1643
BshFI	GGCC	5 cut(s)	188, 877, 1149, 1211, 1242
BsiHKAI	GWGCWC	2 cut(s)	99, 1768
BsiSI	CCGG	3 cut(s)	177, 635, 1309
BslI	CCNNNNNNNGG	3 cut(s)	659, 884, 1037
BsmAI	GTCTC	9 cut(s)	87, 273, 354, 466, 505, 540, 805, 996, 1999
BsmBI	CGTCTC	1 cut(s)	996
BsnI	GGCC	5 cut(s)	188, 877, 1149, 1211, 1242
Bsp1286I	GDGCHC	2 cut(s)	99, 1768
Bsp1407I	TGTACA	1 cut(s)	1417
Bsp143I	GATC	9 cut(s)	697, 1027, 1284, 1312, 1355, 1519, 1695, 1711, 1895
Bsp19I	CCATGG	1 cut(s)	1847
Bsp68I	TCGCGA	1 cut(s)	521
BspANI	GGCC	5 cut(s)	188, 877, 1149, 1211, 1242
BspCNI	CTCAG	3 cut(s)	815, 912, 1129
BspFNI	CGCG	3 cut(s)	160, 521, 1643
BspLI	GGNNCC	4 cut(s)	508, 876, 995, 1314
BspMAI	CTGCAG	1 cut(s)	1086
BspPI	GGATC	7 cut(s)	692, 1022, 1307, 1320, 1363, 1514, 1903
BspQI	GCTCTTC	3 cut(s)	104, 960, 1578
BsrBI	CCGCTC	1 cut(s)	768
BsrDI	GCAATG	1 cut(s)	1551
BsrFI	RCCGGY	1 cut(s)	176
BsrGI	TGTACA	1 cut(s)	1417
BsrI	ACTGG	4 cut(s)	281, 431, 869, 1469
BssAI	RCCGGY	1 cut(s)	176
BssECI	CCNNGG	4 cut(s)	884, 1243, 1847, 1909
BssMI	GATC	9 cut(s)	697, 1027, 1284, 1312, 1355, 1519, 1695, 1711, 1895
BssSI	CACGAG	1 cut(s)	92
BssT1I	CCWWGG	1 cut(s)	1847
Bst2BI	CACGAG	1 cut(s)	92
Bst2UI	CCWGG	6 cut(s)	711, 879, 885, 1245, 1437, 1911
Bst4CI	ACNGT	7 cut(s)	184, 530, 679, 789, 835, 919, 1037
Bst6I	CTCTTC	5 cut(s)	68, 73, 104, 960, 1578
BstAUI	TGTACA	1 cut(s)	1417
BstDEI	CTNAG	4 cut(s)	408, 802, 899, 1137
BstDSI	CCRYGG	1 cut(s)	1847
BstF5I	GGATG	5 cut(s)	654, 719, 1100, 1138, 1509
BstFNI	CGCG	3 cut(s)	160, 521, 1643
BstHHI	GCGC	2 cut(s)	162, 1643
BstKTI	GATC	9 cut(s)	700, 1030, 1287, 1315, 1358, 1522, 1698, 1714, 1898
BstMAI	GTCTC	9 cut(s)	87, 273, 354, 466, 505, 540, 805, 996, 1999
BstMBI	GATC	9 cut(s)	697, 1027, 1284, 1312, 1355, 1519, 1695, 1711, 1895
BstMWI	GCNNNNNNNGC	5 cut(s)	134, 200, 569, 812, 1811
BstNI	CCWGG	6 cut(s)	711, 879, 885, 1245, 1437, 1911
BstNSI	RCATGY	4 cut(s)	1427, 1450, 1541, 2015
BstSCI	CCNGG	7 cut(s)	709, 877, 883, 1243, 1308, 1435, 1909
BstSFI	CTRYAG	2 cut(s)	579, 1082
BstUI	CGCG	3 cut(s)	160, 521, 1643
BstV1I	GCAGC	6 cut(s)	22, 212, 793, 1068, 1282, 1711
BstV2I	GAAGAC	1 cut(s)	836
BstX2I	RGATCY	2 cut(s)	1312, 1711
BstYI	RGATCY	2 cut(s)	1312, 1711
BsuI	GTATCC	1 cut(s)	395
BsuRI	GGCC	5 cut(s)	188, 877, 1149, 1211, 1242
BtgI	CCRYGG	1 cut(s)	1847
BtgZI	GCGATG	1 cut(s)	272
BtrI	CACGTC	1 cut(s)	250
BtsCI	GGATG	5 cut(s)	654, 719, 1100, 1138, 1509
BtsI	GCAGTG	2 cut(s)	1041, 1212
BtsIMutI	CAGTG	6 cut(s)	189, 438, 876, 1041, 1042, 1212
BtuMI	TCGCGA	1 cut(s)	521
CaiI	CAGNNNCTG	3 cut(s)	317, 578, 809
CfoI	GCGC	2 cut(s)	162, 1643
Cfr10I	RCCGGY	1 cut(s)	176
Cfr13I	GGNCC	6 cut(s)	428, 875, 881, 1241, 1306, 1871
CseI	GACGC	1 cut(s)	1013
Csp6I	GTAC	8 cut(s)	180, 299, 526, 675, 1049, 1418, 1852, 1882
CviAII	CATG	8 cut(s)	170, 398, 1253, 1424, 1447, 1538, 1848, 2012
CviQI	GTAC	8 cut(s)	180, 299, 526, 675, 1049, 1418, 1852, 1882
DdeI	CTNAG	4 cut(s)	408, 802, 899, 1137
DpnI	GATC	9 cut(s)	699, 1029, 1286, 1314, 1357, 1521, 1697, 1713, 1897
DpnII	GATC	9 cut(s)	697, 1027, 1284, 1312, 1355, 1519, 1695, 1711, 1895
DraI	TTTAAA	1 cut(s)	2028
DraIII	CACNNNGTG	1 cut(s)	659
DriI	GACNNNNNGTC	1 cut(s)	887
EaeI	YGGCCR	1 cut(s)	186
Eam1104I	CTCTTC	5 cut(s)	68, 73, 104, 960, 1578
Eam1105I	GACNNNNNGTC	1 cut(s)	887
EarI	CTCTTC	5 cut(s)	68, 73, 104, 960, 1578
EciI	GGCGGA	2 cut(s)	633, 1407
Ecl136II	GAGCTC	2 cut(s)	97, 1766
Eco130I	CCWWGG	1 cut(s)	1847
Eco24I	GRGCYC	2 cut(s)	99, 1768
Eco47I	GGWCC	4 cut(s)	428, 881, 1306, 1871
Eco53kI	GAGCTC	2 cut(s)	97, 1766
Eco57I	CTGAAG	3 cut(s)	216, 837, 848
EcoICRI	GAGCTC	2 cut(s)	97, 1766
EcoO109I	RGGNCCY	1 cut(s)	875
EcoRII	CCWGG	6 cut(s)	709, 877, 883, 1243, 1435, 1909
EcoT14I	CCWWGG	1 cut(s)	1847
EcoT22I	ATGCAT	2 cut(s)	1411, 1624
EcoT38I	GRGCYC	2 cut(s)	99, 1768
ErhI	CCWWGG	1 cut(s)	1847
Esp3I	CGTCTC	1 cut(s)	996
FaeI	CATG	8 cut(s)	173, 401, 1256, 1427, 1450, 1541, 1851, 2015
FalI	AAGNNNNNCTT	2 cut(s)	1752, 1784
FatI	CATG	8 cut(s)	169, 397, 1252, 1423, 1446, 1537, 1847, 2011
FbaI	TGATCA	2 cut(s)	1284, 1695
Fnu4HI	GCNGC	7 cut(s)	36, 163, 201, 807, 1082, 1296, 1725
FokI	GGATG	5 cut(s)	661, 726, 1107, 1145, 1516
FriOI	GRGCYC	2 cut(s)	99, 1768
Fsp4HI	GCNGC	7 cut(s)	36, 163, 201, 807, 1082, 1296, 1725
FspBI	CTAG	6 cut(s)	20, 1073, 1274, 1551, 1742, 1998
GlaI	GCGC	2 cut(s)	161, 1642
GluI	GCNGC	7 cut(s)	36, 163, 201, 807, 1082, 1296, 1725
GsuI	CTGGAG	2 cut(s)	525, 1932
HaeIII	GGCC	5 cut(s)	188, 877, 1149, 1211, 1242
HapII	CCGG	3 cut(s)	177, 635, 1309
HgaI	GACGC	1 cut(s)	1013
HhaI	GCGC	2 cut(s)	162, 1643
Hin1II	CATG	8 cut(s)	173, 401, 1256, 1427, 1450, 1541, 1851, 2015
Hin6I	GCGC	2 cut(s)	160, 1641
HinP1I	GCGC	2 cut(s)	160, 1641
HincII	GTYRAC	2 cut(s)	1161, 1444
HindII	GTYRAC	2 cut(s)	1161, 1444
HpaII	CCGG	3 cut(s)	177, 635, 1309
HphI	GGTGA	5 cut(s)	217, 707, 782, 1529, 2045
Hpy166II	GTNNAC	3 cut(s)	1161, 1444, 2036
Hpy8I	GTNNAC	3 cut(s)	1161, 1444, 2036
Hpy99I	CGWCG	3 cut(s)	137, 254, 793
HpyAV	CCTTC	5 cut(s)	34, 61, 124, 950, 1101
HpyCH4III	ACNGT	7 cut(s)	184, 530, 679, 789, 835, 919, 1037
HpyCH4IV	ACGT	3 cut(s)	249, 420, 1691
HpyCH4V	TGCA	9 cut(s)	320, 443, 1064, 1084, 1409, 1622, 1727, 1925, 1937
HpyF10VI	GCNNNNNNNGC	5 cut(s)	134, 200, 569, 812, 1811
HpyF3I	CTNAG	4 cut(s)	408, 802, 899, 1137
HpySE526I	ACGT	3 cut(s)	249, 420, 1691
Hsp92II	CATG	8 cut(s)	173, 401, 1256, 1427, 1450, 1541, 1851, 2015
HspAI	GCGC	2 cut(s)	160, 1641
Ksp22I	TGATCA	2 cut(s)	1284, 1695
Kzo9I	GATC	9 cut(s)	697, 1027, 1284, 1312, 1355, 1519, 1695, 1711, 1895
LguI	GCTCTTC	3 cut(s)	104, 960, 1578
LmnI	GCTCC	4 cut(s)	506, 575, 1019, 1763
Lsp1109I	GCAGC	6 cut(s)	22, 212, 793, 1068, 1282, 1711
LweI	GCATC	7 cut(s)	375, 639, 802, 1123, 1418, 1912, 1967
MaeI	CTAG	6 cut(s)	20, 1073, 1274, 1551, 1742, 1998
MaeII	ACGT	3 cut(s)	249, 420, 1691
MaeIII	GTNAC	1 cut(s)	416
MalI	GATC	9 cut(s)	699, 1029, 1286, 1314, 1357, 1521, 1697, 1713, 1897
MbiI	CCGCTC	1 cut(s)	768
MboI	GATC	9 cut(s)	697, 1027, 1284, 1312, 1355, 1519, 1695, 1711, 1895
MfeI	CAATTG	1 cut(s)	1926
MflI	RGATCY	2 cut(s)	1312, 1711
MhlI	GDGCHC	2 cut(s)	99, 1768
MlsI	TGGCCA	1 cut(s)	188
MluCI	AATT	6 cut(s)	761, 1126, 1280, 1593, 1755, 1926
MluNI	TGGCCA	1 cut(s)	188
MlyI	GAGTC	7 cut(s)	308, 468, 700, 1258, 1358, 1827, 2001
MmeI	TCCRAC	3 cut(s)	144, 725, 820
Mox20I	TGGCCA	1 cut(s)	188
Mph1103I	ATGCAT	2 cut(s)	1411, 1624
MroXI	GAANNNNTTC	4 cut(s)	210, 822, 1904, 1971
MscI	TGGCCA	1 cut(s)	188
MseI	TTAA	7 cut(s)	1193, 1758, 1770, 1785, 1796, 1817, 2027
MslI	CAYNNNNRTG	2 cut(s)	1428, 1502
Msp20I	TGGCCA	1 cut(s)	188
MspA1I	CMGCKG	2 cut(s)	203, 806
MspI	CCGG	3 cut(s)	177, 635, 1309
MspR9I	CCNGG	7 cut(s)	711, 879, 885, 1245, 1310, 1437, 1911
MunI	CAATTG	1 cut(s)	1926
MvaI	CCWGG	6 cut(s)	711, 879, 885, 1245, 1437, 1911
MvnI	CGCG	3 cut(s)	160, 521, 1643
MwoI	GCNNNNNNNGC	5 cut(s)	134, 200, 569, 812, 1811
NciI	CCSGG	1 cut(s)	1310
NcoI	CCATGG	1 cut(s)	1847
NdeII	GATC	9 cut(s)	697, 1027, 1284, 1312, 1355, 1519, 1695, 1711, 1895
NlaIII	CATG	8 cut(s)	173, 401, 1256, 1427, 1450, 1541, 1851, 2015
NlaIV	GGNNCC	4 cut(s)	508, 876, 995, 1314
NruI	TCGCGA	1 cut(s)	521
NsiI	ATGCAT	2 cut(s)	1411, 1624
NspI	RCATGY	4 cut(s)	1427, 1450, 1541, 2015
PciI	ACATGT	3 cut(s)	1423, 1446, 1537
PciSI	GCTCTTC	3 cut(s)	104, 960, 1578
PdmI	GAANNNNTTC	4 cut(s)	210, 822, 1904, 1971
PfeI	GAWTC	3 cut(s)	823, 985, 1343
PflMI	CCANNNNNTGG	1 cut(s)	659
PfoI	TCCNGGA	3 cut(s)	709, 1308, 1435
PkrI	GCNGC	7 cut(s)	37, 164, 202, 808, 1083, 1297, 1726
PleI	GAGTC	7 cut(s)	308, 468, 700, 1258, 1358, 1827, 2000
PpsI	GAGTC	7 cut(s)	308, 468, 700, 1258, 1358, 1827, 2000
PscI	ACATGT	3 cut(s)	1423, 1446, 1537
PshBI	ATTAAT	1 cut(s)	1796
PsiI	TTATAA	1 cut(s)	684
Psp124BI	GAGCTC	2 cut(s)	99, 1768
Psp1406I	AACGTT	1 cut(s)	420
Psp6I	CCWGG	6 cut(s)	709, 877, 883, 1243, 1435, 1909
PspGI	CCWGG	6 cut(s)	709, 877, 883, 1243, 1435, 1909
PspN4I	GGNNCC	4 cut(s)	508, 876, 995, 1314
PspPI	GGNCC	6 cut(s)	428, 875, 881, 1241, 1306, 1871
PsrI	GAACNNNNNNTAC	2 cut(s)	887, 919
PstI	CTGCAG	1 cut(s)	1086
PstNI	CAGNNNCTG	3 cut(s)	317, 578, 809
PsuI	RGATCY	2 cut(s)	1312, 1711
PvuII	CAGCTG	1 cut(s)	806
RruI	TCGCGA	1 cut(s)	521
RsaI	GTAC	8 cut(s)	181, 300, 527, 676, 1050, 1419, 1853, 1883
RsaNI	GTAC	8 cut(s)	180, 299, 526, 675, 1049, 1418, 1852, 1882
RseI	CAYNNNNRTG	2 cut(s)	1428, 1502
SacI	GAGCTC	2 cut(s)	99, 1768
SapI	GCTCTTC	3 cut(s)	104, 960, 1578
SaqAI	TTAA	7 cut(s)	1193, 1758, 1770, 1785, 1796, 1817, 2027
SatI	GCNGC	7 cut(s)	36, 163, 201, 807, 1082, 1296, 1725
Sau3AI	GATC	9 cut(s)	697, 1027, 1284, 1312, 1355, 1519, 1695, 1711, 1895
Sau96I	GGNCC	6 cut(s)	428, 875, 881, 1241, 1306, 1871
SchI	GAGTC	7 cut(s)	308, 468, 700, 1258, 1358, 1827, 2001
ScrFI	CCNGG	7 cut(s)	711, 879, 885, 1245, 1310, 1437, 1911
SduI	GDGCHC	2 cut(s)	99, 1768
SfaNI	GCATC	7 cut(s)	375, 639, 802, 1123, 1418, 1912, 1967
SfcI	CTRYAG	2 cut(s)	579, 1082
SinI	GGWCC	4 cut(s)	428, 881, 1306, 1871
SmiMI	CAYNNNNRTG	2 cut(s)	1428, 1502
SmlI	CTYRAG	3 cut(s)	476, 1299, 1631
SmoI	CTYRAG	3 cut(s)	476, 1299, 1631
Sse9I	AATT	6 cut(s)	761, 1126, 1280, 1593, 1755, 1926
SspMI	CTAG	6 cut(s)	20, 1073, 1274, 1551, 1742, 1998
SstI	GAGCTC	2 cut(s)	99, 1768
StyD4I	CCNGG	7 cut(s)	709, 877, 883, 1243, 1308, 1435, 1909
StyI	CCWWGG	1 cut(s)	1847
TaaI	ACNGT	7 cut(s)	184, 530, 679, 789, 835, 919, 1037
TaiI	ACGT	3 cut(s)	252, 423, 1694
TaqI	TCGA	6 cut(s)	5, 1105, 1199, 1703, 1877, 1898
TaqII	GACCGA	1 cut(s)	1839
TasI	AATT	6 cut(s)	761, 1126, 1280, 1593, 1755, 1926
TatI	WGTACW	1 cut(s)	1417
TauI	GCSGC	1 cut(s)	165
TfiI	GAWTC	3 cut(s)	823, 985, 1343
Tru1I	TTAA	7 cut(s)	1193, 1758, 1770, 1785, 1796, 1817, 2027
Tru9I	TTAA	7 cut(s)	1193, 1758, 1770, 1785, 1796, 1817, 2027
TscAI	CASTG	6 cut(s)	189, 438, 876, 1042, 1048, 1212
TseI	GCWGC	6 cut(s)	35, 200, 806, 1081, 1295, 1724
TspDTI	ATGAA	7 cut(s)	91, 275, 386, 393, 1241, 1293, 1356
TspGWI	ACGGA	3 cut(s)	121, 1884, 1908
TspRI	CASTG	6 cut(s)	189, 438, 876, 1042, 1048, 1212
Van91I	CCANNNNNTGG	1 cut(s)	659
VpaK11BI	GGWCC	4 cut(s)	428, 881, 1306, 1871
VspI	ATTAAT	1 cut(s)	1796
XbaI	TCTAGA	1 cut(s)	1997
XceI	RCATGY	4 cut(s)	1427, 1450, 1541, 2015
XmnI	GAANNNNTTC	4 cut(s)	210, 822, 1904, 1971
XspI	CTAG	6 cut(s)	20, 1073, 1274, 1551, 1742, 1998
Zsp2I	ATGCAT	2 cut(s)	1411, 1624

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.