Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0008624

Physical Location & Seq

Genomic Coordinates Forward (+)

5498492 .. 5503535

Gene Structure 5044 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1067200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2130 bp

ATGATTATCCAAACGGCTGCAGCAGCCACTCTGCTGACCGCCATAGCCACCACTTTCACCTTCCATCTCATTTCTCCAACCCCAAAATCCTTCTACCACTCTCTCTTCACATCCCCCTCACTTTCAGACAATGCTTCTATCTCTCACCACCTCCACACCCTCACCCGTCGCCCCCATGTGGCCGGCCAAGAAGCCAATGCCGAGGCCGCCGCCTACGTCCTCTCCGTCTTCACCTCCTCCAACATCAAAACCCACATCGCCCCATACCAAGTTGCCCTCACTTACCCTGTCTCCCGGTCCCTAAAGCTCACACCTTTACCGCAAGACCCACAAACCCAAATCGAGTTCGACCTCCGGCAAGAAGTCTATGGCGGCGATCCCTACGCCGACGTGGCAGAGGAAGTCCTGCCCACTTTCCATGCCTATGCAAAGTCGGGAACTGTGGAAGCGCCGGTGGTATTTGTAAATTATGGAACTTTGGAGGACTATTTGACTTTGGAAAAAATGGGAGTTAACGTTTCTGGAAAAATTGTGTTGGCGAAGTATGGGAGTATTTACAGAGGGAGTATTGTGCAAATTGCATATGAAGCGGGGGCTGTTGGGGTTCTGGTGTATACAGATAGGAAGGACTACGGCGGAGGCGGCGGAGCAAAGTGGTTCCCGGACGAGAAGTGGCTGCCGCCAAGTGGGGTCCAGGTGGGGTCAGTTTACAATGCGTATGGTGATCCTACGACGCCGGGGTGGGCTAGTAGTGAAGAGTGTGAGAGGCTTTCGGATGAGGAGGTGGAGGAGGCAGGGGATGTTGGGAAGATACCGTCACTGCCAATTGCCGCGGCGGACGGCGAAACCATTTTGAGGGCTATTGGAGGGCAGGTGGCAAATGATGATTGGCAGGGAAGTGATGATGCTCCGGTTTATAGGGTTGGTCCTGGTCCTGGGGTTGTGCATCTCAGTTACACTGGGAAGCAAGTCATAGGGAGAATTGAGAATGTGATTGGTGTCATAGAAGGAGAAGAGGAGCCTGACCGATTTGTCATTTTGGGCAATCACCGGGATGCGTGGACATTTGGAGCCGTTGATCCAAATAGTGGAACTGCAGCACTGCTTGAGATTGCCCAAAGATTAGGGAAGCTGCAGAAAAGAGGGTGGAAGCCTCGGCGTACAATTGTCTTGTGTAATTGGGATGCTGAGGAGTATGGCCTGATAGGATCAACTGAATGGGTAGAAGAAAACAGGCAAATGCTAGCTTCAAAGGCTATTGCTTACTTGAATGTTGACAGTGCAGTGTACGGCCCGGGATTCTGGGCCGCTTCAACTCCACAGCTTGATGAACTGCTTAAACAAGCTACTCAACAGGTTAAAGACCCAGATAACTCATCACAAACCATCTACCAATCATGGGTTGGTTCGAGCAGCTCGCCTATGATTGGCAGGTTGGGAAGCGGAGAATCAGATTTTGCAGCTTTTGTTCATCATATTGGAATTCCAGCAGCTGACATGGCTTTCGGTAAAGGATACCCGGTATACCATTCAATGTATGATGACTTTATATGGATGCAAAAGTTCGGTGATCCATTGTTTCAAAGGCATGTTGCAGTGGCAAGTTTATGGGGTTTGGTAGCTCTTTGGCTAGCTGATGCAGAAGTCTTGCCTTTTAATTATCTCTCCTATGCACTGGAGCTACAGAGTTACGTGAAGGACCTGGAAGATGATCTTTCAGGTAAGAACGTAAACCTAACTCCTCTGTTCAAGTCCATTGAGGAGCTCGAGAAAGCAGCCACAAATATAAACAGCCAGAGAGAGGAAATAGAACAATGCAAAGCTAATCTATATATCGGAAAGAAAGATCACTTTAAGGTGAGAGAGCTGAATGACAGACTTATGATGGCGGAGCGCGCATTTACAGATCAAGACGGACTCTTAGGAAGGTCATGGTTTAAGCATTTGATTTATGGGCCCTCAGAGCATGATGATTATGGATCTGTATCCTTCCCTGGCATAGGTGAAGCCATTGAAAAGGCAAAGAGTTTGAAGACAGCAGAGTCATGGAAAATTGTACAACATGAAGTTTATAGAGTCTCTAGAGCTGTTAAACATGCATCACAAATCATCAACGGCGAATTAACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005783 GO:0008150 GO:0009888 GO:0010073 GO:0012505 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048507 GO:0048856

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PA Peptidase_M28 TFR_dimer

Protein Analysis

710

Amino Acids

77.89

Weight (kDa)

5.1

Isoelectric Point (pI)

38.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PA	PF02225	148 - 233	1.5e-08	PA domain
Peptidase_M28	PF04389	330 - 516	3e-25	Peptidase family M28
TFR_dimer	PF04253	577 - 704	4.6e-33	Transferrin receptor-like dimerisation domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008624)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19740
fragaria_vesca	FvH4_1g06360 FvH4_1g06360 FvH4_6g31420 FvH4_6g31420 FvH4_6g31420
malus_domestica	MD02G1067100.v1.1 MD02G1067200.v1.1
prunus_persica	Prupe.7G218300_v2.0.a1 Prupe.7G218300_v2.0.a1 Prupe.7G218300_v2.0.a1
pyrus_communis	pycom02g05310
rosa_chinensis	RchiOBHm_Chr2g0092051
rosa_laevigata	RLG00000016272
rosa_multiflora	Rmu_sc0000524.1_g000005
rosa_roxburghii	Rroxscaffold_2G00149510
rosa_rugosa	Rorug02G0022600 Rorug02G0022700
rosa_samantha	Rh2AG068300 Rh2BG067600 Rh2CG068900 Rh2DG067200
rosa_wichuraiana	Rw2G005290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	862
AasI	GACNNNNNNGTC	2 cut(s)	1031, 2041
Acc36I	ACCTGC	2 cut(s)	862, 1422
AccB7I	CCANNNNNTGG	1 cut(s)	1088
AccI	GTMKAC	2 cut(s)	614, 1524
AccII	CGCG	2 cut(s)	833, 1896
AclI	AACGTT	1 cut(s)	516
AclWI	GGATC	6 cut(s)	371, 719, 1073, 1216, 1565, 1987
AcoI	YGGCCR	2 cut(s)	180, 184
AcsI	RAATTY	1 cut(s)	1482
AcyI	GRCGYC	1 cut(s)	734
AfaI	GTAC	3 cut(s)	1162, 1289, 2058
AfiI	CCNNNNNNNGG	9 cut(s)	178, 686, 855, 935, 1088, 1399, 1427, 1801, 2000
AgsI	TTSAA	8 cut(s)	1251, 1270, 1314, 1533, 1583, 1750, 2015, 2032
AjiI	CACGTC	1 cut(s)	391
AjnI	CCWGG	5 cut(s)	693, 928, 934, 1701, 1993
Alw21I	GWGCWC	1 cut(s)	1767
Alw26I	GTCTC	2 cut(s)	295, 2083
AlwI	GGATC	6 cut(s)	371, 719, 1073, 1216, 1565, 1987
AlwNI	CAGNNNCTG	1 cut(s)	1493
Ama87I	CYCGRG	2 cut(s)	1294, 1766
AoxI	GGCC	7 cut(s)	180, 184, 204, 1198, 1291, 1305, 1955
ApaI	GGGCCC	1 cut(s)	1959
ApoI	RAATTY	1 cut(s)	1482
ArsI	GACNNNNNNTTYG	2 cut(s)	1487, 1519
AspLEI	GCGC	3 cut(s)	451, 1896, 1898
AspS9I	GGNCC	9 cut(s)	297, 691, 926, 932, 1292, 1305, 1699, 1955, 1956
AsuC2I	CCSGG	7 cut(s)	295, 662, 738, 1052, 1295, 1296, 1520
AsuHPI	GGTGA	9 cut(s)	49, 137, 154, 223, 734, 1040, 1580, 1870, 2015
AsuNHI	GCTAGC	2 cut(s)	1243, 1630
AvaI	CYCGRG	2 cut(s)	1294, 1766
AvaII	GGWCC	5 cut(s)	297, 691, 926, 932, 1699
BaeGI	GKGCMC	1 cut(s)	1959
BanII	GRGCYC	2 cut(s)	1767, 1959
BbsI	GAAGAC	2 cut(s)	220, 2039
Bbv12I	GWGCWC	1 cut(s)	1767
BbvCI	CCTCAGC	1 cut(s)	1188
BccI	CCATC	3 cut(s)	72, 1394, 1879
BceAI	ACGGC	5 cut(s)	30, 649, 856, 1058, 1306
BciT130I	CCWGG	5 cut(s)	695, 930, 936, 1703, 1995
BciVI	GTATCC	2 cut(s)	1508, 1996
BcnI	CCSGG	7 cut(s)	295, 662, 738, 1052, 1295, 1296, 1520
BcoDI	GTCTC	2 cut(s)	295, 2083
BfaI	CTAG	4 cut(s)	747, 1244, 1631, 2082
BfmI	CTRYAG	4 cut(s)	18, 1095, 1133, 1682
BfoI	RGCGCY	1 cut(s)	452
BfuAI	ACCTGC	2 cut(s)	862, 1422
BfuI	GTATCC	2 cut(s)	1508, 1996
BglI	GCCNNNNNGGC	1 cut(s)	392
Bme18I	GGWCC	5 cut(s)	297, 691, 926, 932, 1699
BmeT110I	CYCGRG	2 cut(s)	1294, 1766
BmgBI	CACGTC	1 cut(s)	391
BmgT120I	GGNCC	9 cut(s)	297, 691, 926, 932, 1292, 1305, 1699, 1955, 1956
BmiI	GGNNCC	6 cut(s)	299, 659, 692, 1020, 1072, 1957
BmrI	ACTGGG	1 cut(s)	969
BmsI	GCATC	7 cut(s)	895, 955, 1045, 1174, 1545, 1627, 2108
BmtI	GCTAGC	2 cut(s)	1247, 1634
BmuI	ACTGGG	1 cut(s)	969
BpiI	GAAGAC	2 cut(s)	220, 2039
BpmI	CTGGAG	1 cut(s)	1697
Bpu10I	CCTNAGC	1 cut(s)	1188
BpuEI	CTTGAG	1 cut(s)	1127
BpuMI	CCSGG	7 cut(s)	295, 662, 738, 1052, 1295, 1296, 1520
BsaAI	YACGTR	1 cut(s)	1693
BsaBI	GATNNNNATC	1 cut(s)	1984
BsaHI	GRCGYC	1 cut(s)	734
BsaJI	CCNNGG	7 cut(s)	201, 737, 831, 935, 1154, 1294, 1993
BsaWI	WCCGGW	1 cut(s)	910
BsaXI	ACNNNNNCTCC	8 cut(s)	206, 236, 275, 305, 501, 531, 858, 888
Bsc4I	CCNNNNNNNGG	9 cut(s)	178, 686, 855, 935, 1088, 1399, 1427, 1801, 2000
Bse118I	RCCGGY	2 cut(s)	182, 451
Bse1I	ACTGG	2 cut(s)	964, 1680
Bse8I	GATNNNNATC	1 cut(s)	1984
BseBI	CCWGG	5 cut(s)	695, 930, 936, 1703, 1995
BseDI	CCNNGG	7 cut(s)	201, 737, 831, 935, 1154, 1294, 1993
BseGI	GGATG	6 cut(s)	110, 781, 805, 1060, 1189, 1560
BseJI	GATNNNNATC	1 cut(s)	1984
BseLI	CCNNNNNNNGG	9 cut(s)	178, 686, 855, 935, 1088, 1399, 1427, 1801, 2000
BseMII	CTCAG	3 cut(s)	964, 1179, 1974
BseNI	ACTGG	2 cut(s)	964, 1680
BsePI	GCGCGC	1 cut(s)	1894
BseRI	GAGGAG	7 cut(s)	226, 794, 803, 1031, 1205, 1731, 1775
BseSI	GKGCMC	1 cut(s)	1959
BsgI	GTGCAG	1 cut(s)	1302
Bsh1236I	CGCG	2 cut(s)	833, 1896
BshFI	GGCC	7 cut(s)	182, 186, 206, 1200, 1293, 1307, 1957
BsiHKAI	GWGCWC	1 cut(s)	1767
BsiHKCI	CYCGRG	2 cut(s)	1294, 1766
BslFI	GGGAC	1 cut(s)	283
BslI	CCNNNNNNNGG	9 cut(s)	178, 686, 855, 935, 1088, 1399, 1427, 1801, 2000
BsmAI	GTCTC	2 cut(s)	295, 2083
BsmFI	GGGAC	1 cut(s)	283
BsnI	GGCC	7 cut(s)	182, 186, 206, 1200, 1293, 1307, 1957
BsoBI	CYCGRG	2 cut(s)	1294, 1766
Bsp120I	GGGCCC	1 cut(s)	1955
Bsp1286I	GDGCHC	2 cut(s)	1767, 1959
Bsp1407I	TGTACA	1 cut(s)	2056
Bsp143I	GATC	9 cut(s)	376, 724, 1078, 1208, 1570, 1711, 1846, 1906, 1979
BspANI	GGCC	7 cut(s)	182, 186, 206, 1200, 1293, 1307, 1957
BspCNI	CTCAG	3 cut(s)	963, 1180, 1973
BspFNI	CGCG	2 cut(s)	833, 1896
BspLI	GGNNCC	6 cut(s)	299, 659, 692, 1020, 1072, 1957
BspMAI	CTGCAG	3 cut(s)	22, 1099, 1137
BspMI	ACCTGC	2 cut(s)	862, 1422
BspOI	GCTAGC	2 cut(s)	1247, 1634
BspPI	GGATC	6 cut(s)	371, 719, 1073, 1216, 1565, 1987
BsrFI	RCCGGY	2 cut(s)	182, 451
BsrGI	TGTACA	1 cut(s)	2056
BsrI	ACTGG	2 cut(s)	964, 1680
BssAI	RCCGGY	2 cut(s)	182, 451
BssECI	CCNNGG	7 cut(s)	201, 737, 831, 935, 1154, 1294, 1993
BssHII	GCGCGC	1 cut(s)	1894
BssMI	GATC	9 cut(s)	376, 724, 1078, 1208, 1570, 1711, 1846, 1906, 1979
BssNAI	GTATAC	2 cut(s)	615, 1525
BssNI	GRCGYC	1 cut(s)	734
Bst1107I	GTATAC	2 cut(s)	615, 1525
Bst2UI	CCWGG	5 cut(s)	695, 930, 936, 1703, 1995
Bst4CI	ACNGT	3 cut(s)	442, 816, 1280
Bst6I	CTCTTC	3 cut(s)	110, 750, 1008
BstACI	GRCGYC	1 cut(s)	734
BstAUI	TGTACA	1 cut(s)	2056
BstBAI	YACGTR	1 cut(s)	1693
BstC8I	GCNNGC	5 cut(s)	184, 1245, 1418, 1632, 1896
BstDEI	CTNAG	4 cut(s)	950, 1188, 1921, 1960
BstDSI	CCRYGG	1 cut(s)	831
BstENI	CCTNNNNNAGG	1 cut(s)	1998
BstF5I	GGATG	6 cut(s)	110, 781, 805, 1060, 1189, 1560
BstFNI	CGCG	2 cut(s)	833, 1896
BstH2I	RGCGCY	1 cut(s)	452
BstHHI	GCGC	3 cut(s)	451, 1896, 1898
BstKTI	GATC	9 cut(s)	379, 727, 1081, 1211, 1573, 1714, 1849, 1909, 1982
BstMAI	GTCTC	2 cut(s)	295, 2083
BstMBI	GATC	9 cut(s)	376, 724, 1078, 1208, 1570, 1711, 1846, 1906, 1979
BstMWI	GCNNNNNNNGC	9 cut(s)	23, 206, 392, 587, 642, 1253, 1499, 1895, 1963
BstNI	CCWGG	5 cut(s)	695, 930, 936, 1703, 1995
BstNSI	RCATGY	2 cut(s)	1592, 2099
BstSFI	CTRYAG	4 cut(s)	18, 1095, 1133, 1682
BstSLI	GKGCMC	1 cut(s)	1959
BstUI	CGCG	2 cut(s)	833, 1896
BstV2I	GAAGAC	2 cut(s)	220, 2039
BstX2I	RGATCY	1 cut(s)	1979
BstYI	RGATCY	1 cut(s)	1979
BstZ17I	GTATAC	2 cut(s)	615, 1525
BsuI	GTATCC	2 cut(s)	1508, 1996
BsuRI	GGCC	7 cut(s)	182, 186, 206, 1200, 1293, 1307, 1957
BtgI	CCRYGG	1 cut(s)	831
BtgZI	GCGATG	1 cut(s)	241
BtrI	CACGTC	1 cut(s)	391
BtsCI	GGATG	6 cut(s)	110, 781, 805, 1060, 1189, 1560
BtsI	GCAGTG	4 cut(s)	818, 1100, 1290, 1602
BtsIMutI	CAGTG	7 cut(s)	818, 957, 1100, 1285, 1290, 1602, 1673
BveI	ACCTGC	2 cut(s)	862, 1422
Cac8I	GCNNGC	5 cut(s)	184, 1245, 1418, 1632, 1896
CaiI	CAGNNNCTG	1 cut(s)	1493
CfoI	GCGC	3 cut(s)	451, 1896, 1898
Cfr10I	RCCGGY	2 cut(s)	182, 451
Cfr13I	GGNCC	9 cut(s)	297, 691, 926, 932, 1292, 1305, 1699, 1955, 1956
Cfr42I	CCGCGG	1 cut(s)	834
Cfr9I	CCCGGG	1 cut(s)	1294
CseI	GACGC	1 cut(s)	742
Csp6I	GTAC	3 cut(s)	1161, 1288, 2057
CviQI	GTAC	3 cut(s)	1161, 1288, 2057
DdeI	CTNAG	4 cut(s)	950, 1188, 1921, 1960
DpnI	GATC	9 cut(s)	378, 726, 1080, 1210, 1572, 1713, 1848, 1908, 1981
DpnII	GATC	9 cut(s)	376, 724, 1078, 1208, 1570, 1711, 1846, 1906, 1979
DrdI	GACNNNNNNGTC	2 cut(s)	1031, 2041
DseDI	GACNNNNNNGTC	2 cut(s)	1031, 2041
EaeI	YGGCCR	2 cut(s)	180, 184
Eam1104I	CTCTTC	3 cut(s)	110, 750, 1008
EarI	CTCTTC	3 cut(s)	110, 750, 1008
EciI	GGCGGA	4 cut(s)	651, 660, 851, 1904
Ecl136II	GAGCTC	1 cut(s)	1765
Eco24I	GRGCYC	2 cut(s)	1767, 1959
Eco47I	GGWCC	5 cut(s)	297, 691, 926, 932, 1699
Eco53kI	GAGCTC	1 cut(s)	1765
Eco88I	CYCGRG	2 cut(s)	1294, 1766
EcoICRI	GAGCTC	1 cut(s)	1765
EcoNI	CCTNNNNNAGG	1 cut(s)	1998
EcoO109I	RGGNCCY	2 cut(s)	1699, 1956
EcoRI	GAATTC	1 cut(s)	1482
EcoRII	CCWGG	5 cut(s)	693, 928, 934, 1701, 1993
EcoT22I	ATGCAT	1 cut(s)	2101
EcoT38I	GRGCYC	2 cut(s)	1767, 1959
FalI	AAGNNNNNCTT	2 cut(s)	1698, 1730
FaqI	GGGAC	1 cut(s)	283
FauI	CCCGC	1 cut(s)	583
FauNDI	CATATG	1 cut(s)	583
FblI	GTMKAC	2 cut(s)	614, 1524
FokI	GGATG	6 cut(s)	97, 788, 812, 1067, 1196, 1567
FriOI	GRGCYC	2 cut(s)	1767, 1959
FseI	GGCCGGCC	1 cut(s)	186
FspBI	CTAG	4 cut(s)	747, 1244, 1631, 2082
GlaI	GCGC	3 cut(s)	450, 1895, 1897
GsuI	CTGGAG	1 cut(s)	1697
HaeII	RGCGCY	1 cut(s)	452
HaeIII	GGCC	7 cut(s)	182, 186, 206, 1200, 1293, 1307, 1957
HgaI	GACGC	1 cut(s)	742
HhaI	GCGC	3 cut(s)	451, 1896, 1898
Hin1I	GRCGYC	1 cut(s)	734
Hin6I	GCGC	3 cut(s)	449, 1894, 1896
HinP1I	GCGC	3 cut(s)	449, 1894, 1896
HincII	GTYRAC	2 cut(s)	514, 1276
HindII	GTYRAC	2 cut(s)	514, 1276
HinfI	GANTC	5 cut(s)	1299, 1448, 1917, 2042, 2076
HpaI	GTTAAC	1 cut(s)	514
HphI	GGTGA	9 cut(s)	49, 137, 154, 223, 734, 1040, 1580, 1870, 2015
Hpy166II	GTNNAC	8 cut(s)	514, 615, 709, 1062, 1276, 1288, 1525, 1732
Hpy188I	TCNGA	5 cut(s)	127, 775, 1453, 1838, 1963
Hpy188III	TCNNGA	5 cut(s)	435, 522, 1768, 1910, 2082
Hpy8I	GTNNAC	8 cut(s)	514, 615, 709, 1062, 1276, 1288, 1525, 1732
Hpy99I	CGWCG	3 cut(s)	171, 392, 736
HpyAV	CCTTC	7 cut(s)	70, 100, 619, 1001, 1690, 1920, 1999
HpyCH4III	ACNGT	3 cut(s)	442, 816, 1280
HpyCH4IV	ACGT	5 cut(s)	216, 390, 516, 1692, 1728
HpyF10VI	GCNNNNNNNGC	9 cut(s)	23, 206, 392, 587, 642, 1253, 1499, 1895, 1963
HpyF3I	CTNAG	4 cut(s)	950, 1188, 1921, 1960
HpySE526I	ACGT	5 cut(s)	216, 390, 516, 1692, 1728
Hsp92I	GRCGYC	1 cut(s)	734
HspAI	GCGC	3 cut(s)	449, 1894, 1896
KroI	GCCGGC	1 cut(s)	182
KroNI	GCCGGC	1 cut(s)	184
KspAI	GTTAAC	1 cut(s)	514
KspI	CCGCGG	1 cut(s)	834
Kzo9I	GATC	9 cut(s)	376, 724, 1078, 1208, 1570, 1711, 1846, 1906, 1979
LmnI	GCTCC	7 cut(s)	647, 913, 1018, 1070, 1678, 1762, 1891
LweI	GCATC	7 cut(s)	895, 955, 1045, 1174, 1545, 1627, 2108
MaeI	CTAG	4 cut(s)	747, 1244, 1631, 2082
MaeII	ACGT	5 cut(s)	216, 390, 516, 1692, 1728
MaeIII	GTNAC	3 cut(s)	816, 953, 1688
MalI	GATC	9 cut(s)	378, 726, 1080, 1210, 1572, 1713, 1848, 1908, 1981
MboI	GATC	9 cut(s)	376, 724, 1078, 1208, 1570, 1711, 1846, 1906, 1979
MboII	GAAGA	8 cut(s)	97, 220, 767, 820, 1025, 1238, 1718, 2044
MfeI	CAATTG	2 cut(s)	825, 1164
MflI	RGATCY	1 cut(s)	1979
MhlI	GDGCHC	2 cut(s)	1767, 1959
MlyI	GAGTC	3 cut(s)	1911, 2051, 2085
MmeI	TCCRAC	2 cut(s)	101, 264
Mph1103I	ATGCAT	1 cut(s)	2101
MroNI	GCCGGC	1 cut(s)	182
MseI	TTAA	8 cut(s)	513, 1338, 1359, 1656, 1854, 1938, 2091, 2123
MslI	CAYNNNNRTG	2 cut(s)	423, 1053
MspA1I	CMGCKG	2 cut(s)	833, 1493
MunI	CAATTG	2 cut(s)	825, 1164
MvaI	CCWGG	5 cut(s)	695, 930, 936, 1703, 1995
MvnI	CGCG	2 cut(s)	833, 1896
MwoI	GCNNNNNNNGC	9 cut(s)	23, 206, 392, 587, 642, 1253, 1499, 1895, 1963
NaeI	GCCGGC	1 cut(s)	184
NciI	CCSGG	7 cut(s)	295, 662, 738, 1052, 1295, 1296, 1520
NdeI	CATATG	1 cut(s)	583
NdeII	GATC	9 cut(s)	376, 724, 1078, 1208, 1570, 1711, 1846, 1906, 1979
NgoMIV	GCCGGC	1 cut(s)	182
NheI	GCTAGC	2 cut(s)	1243, 1630
NlaIV	GGNNCC	6 cut(s)	299, 659, 692, 1020, 1072, 1957
NmeAIII	GCCGAG	2 cut(s)	226, 1135
NmuCI	GTSAC	1 cut(s)	816
NsiI	ATGCAT	1 cut(s)	2101
NspI	RCATGY	2 cut(s)	1592, 2099
PaeR7I	CTCGAG	1 cut(s)	1766
PaqCI	CACCTGC	1 cut(s)	862
PauI	GCGCGC	1 cut(s)	1894
PcsI	WCGNNNNNNNCGW	1 cut(s)	222
PdiI	GCCGGC	1 cut(s)	184
PfeI	GAWTC	2 cut(s)	1299, 1448
PflMI	CCANNNNNTGG	1 cut(s)	1088
PfoI	TCCNGGA	1 cut(s)	660
PleI	GAGTC	3 cut(s)	1911, 2050, 2084
PpsI	GAGTC	3 cut(s)	1911, 2050, 2084
Ppu21I	YACGTR	1 cut(s)	1693
PpuMI	RGGWCCY	1 cut(s)	1699
Psp124BI	GAGCTC	1 cut(s)	1767
Psp1406I	AACGTT	1 cut(s)	516
Psp5II	RGGWCCY	1 cut(s)	1699
Psp6I	CCWGG	5 cut(s)	693, 928, 934, 1701, 1993
PspGI	CCWGG	5 cut(s)	693, 928, 934, 1701, 1993
PspN4I	GGNNCC	6 cut(s)	299, 659, 692, 1020, 1072, 1957
PspOMI	GGGCCC	1 cut(s)	1955
PspPI	GGNCC	9 cut(s)	297, 691, 926, 932, 1292, 1305, 1699, 1955, 1956
PspPPI	RGGWCCY	1 cut(s)	1699
PstI	CTGCAG	3 cut(s)	22, 1099, 1137
PstNI	CAGNNNCTG	1 cut(s)	1493
PsuI	RGATCY	1 cut(s)	1979
PteI	GCGCGC	1 cut(s)	1894
PvuII	CAGCTG	1 cut(s)	1493
RigI	GGCCGGCC	1 cut(s)	186
RsaI	GTAC	3 cut(s)	1162, 1289, 2058
RsaNI	GTAC	3 cut(s)	1161, 1288, 2057
RseI	CAYNNNNRTG	2 cut(s)	423, 1053
SacI	GAGCTC	1 cut(s)	1767
SacII	CCGCGG	1 cut(s)	834
SaqAI	TTAA	8 cut(s)	513, 1338, 1359, 1656, 1854, 1938, 2091, 2123
Sau3AI	GATC	9 cut(s)	376, 724, 1078, 1208, 1570, 1711, 1846, 1906, 1979
Sau96I	GGNCC	9 cut(s)	297, 691, 926, 932, 1292, 1305, 1699, 1955, 1956
SchI	GAGTC	3 cut(s)	1911, 2051, 2085
SduI	GDGCHC	2 cut(s)	1767, 1959
SfaNI	GCATC	7 cut(s)	895, 955, 1045, 1174, 1545, 1627, 2108
SfcI	CTRYAG	4 cut(s)	18, 1095, 1133, 1682
Sfr274I	CTCGAG	1 cut(s)	1766
Sfr303I	CCGCGG	1 cut(s)	834
SgrAI	CRCCGGYG	1 cut(s)	451
SgrBI	CCGCGG	1 cut(s)	834
SinI	GGWCC	5 cut(s)	297, 691, 926, 932, 1699
SlaI	CTCGAG	1 cut(s)	1766
SmaI	CCCGGG	1 cut(s)	1296
SmiMI	CAYNNNNRTG	2 cut(s)	423, 1053
SmlI	CTYRAG	2 cut(s)	1106, 1766
SmoI	CTYRAG	2 cut(s)	1106, 1766
SspMI	CTAG	4 cut(s)	747, 1244, 1631, 2082
SstI	GAGCTC	1 cut(s)	1767
TaaI	ACNGT	3 cut(s)	442, 816, 1280
TaiI	ACGT	5 cut(s)	219, 393, 519, 1695, 1731
TaqI	TCGA	4 cut(s)	342, 348, 1409, 1767
TaqII	GACCGA	1 cut(s)	1041
TatI	WGTACW	1 cut(s)	2056
TauI	GCSGC	8 cut(s)	209, 212, 375, 645, 682, 833, 836, 1310
TfiI	GAWTC	2 cut(s)	1299, 1448
Tru1I	TTAA	8 cut(s)	513, 1338, 1359, 1656, 1854, 1938, 2091, 2123
Tru9I	TTAA	8 cut(s)	513, 1338, 1359, 1656, 1854, 1938, 2091, 2123
TscAI	CASTG	7 cut(s)	825, 964, 1107, 1285, 1290, 1602, 1680
TseFI	GTSAC	1 cut(s)	816
Tsp45I	GTSAC	1 cut(s)	816
TspDTI	ATGAA	4 cut(s)	600, 1344, 1460, 2079
TspGWI	ACGGA	2 cut(s)	214, 1929
TspMI	CCCGGG	1 cut(s)	1294
TspRI	CASTG	7 cut(s)	825, 964, 1107, 1285, 1290, 1602, 1680
Van91I	CCANNNNNTGG	1 cut(s)	1088
VpaK11BI	GGWCC	5 cut(s)	297, 691, 926, 932, 1699
XagI	CCTNNNNNAGG	1 cut(s)	1998
XapI	RAATTY	1 cut(s)	1482
XbaI	TCTAGA	1 cut(s)	2081
XceI	RCATGY	2 cut(s)	1592, 2099
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1400
XhoI	CTCGAG	1 cut(s)	1766
XmaI	CCCGGG	1 cut(s)	1294
XmiI	GTMKAC	2 cut(s)	614, 1524
XspI	CTAG	4 cut(s)	747, 1244, 1631, 2082
Zsp2I	ATGCAT	1 cut(s)	2101

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.