Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0008624

Physical Location & Seq

Genomic Coordinates Reverse (-)

1812981 .. 1817505

Gene Structure 4525 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0022700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1698 bp

ATGGGCTTCGTTTTCGGTTTGGTTCTCGGCATCGTCGTCGGGCTCACTCTCGTCGTCGGCTTCGTCAAGCTCGAGAACCGCCGCTCCAAGCTCCGGTCACAGCTGGCCACCACCGTCGCCGCCTTTGCTCGAATGACCGTCGAAGATTCTAGAAAGCTCCTCCCTCCTGACTACTACCCTTCTTGGGTCGTCTTCTCTCAGCGTCAGAAGTTGAAGTGGCTCAATTCTCACCTCACGAAGATCTGGCCGTATGTGAATGAGGCAGCTTCTGAGTTGATTAAGGCTTCAGTGGAGCCAACTCTGGAGCAGTACACGCCGATGATATTGTCCTCAATCAAGTTTTCCAAGTTCACTCTTGGTACTGTGGCACCGCAATTTACAGGGGTTTCTGTAATTGAAGGAGGAGGTGACAGTGTCACTATGGAGTTGGAAATGCAGTGGGATGGAAATCCAAGTATAATACTTGCCATTAAGACTTTACTTGGTGTATCACTACCTGTGCAGGTGAAAGACATCGGATTCACTGGGGTATTCAGGCTTATATTTAAGCCTCTGGTTGACCAGTTCCCATGCTTTGGAGCTGTTAGCTTTTCCTTGAGAGAAAAGAAAAATTTGGATTTTAAGCTGAAAGTTGTGGGTGGTGACATATCTGCAATACCTGGACTCCAAGATCAACTTGAGGGGACTATACGCGATGCCATTGAAGATTCGATTACATGGCCTGTTCGAAAAGTTATTCCCATTTTGCCTGGGGATTACAGTGATCTGGAGTTAAAGACAGTTGGCATACTAGAGGTGAAGCTTGTGCAGGCAAAGGAGTTGACAAATAAAGACGTTGTTGGAAAATCAGACCCGTACGCCTTGTTGTATGTTCGACCTTTAAAAGACAGAATGAAGAAAAGCAGAACTATCAACAATGATTTGAGTCCAATTTGGAATGAACACTTTGAATTTGTTGTTGAAGATGAATCCACTCAACATTTGGTGGTTAAAATTTTTGACGATGAGGGCCTTGGGGCATCCGAGCTCATTGGGTGTGCTCAGGTACAATTAAGCGAACTTCAGCCGGGTAAAGTGAAGGATGTGTGGTTGAAGCTGGTTAAAAGTTTGGAAGTCCAAAGAGATAATAAAAACCGTGGGCAGGTGCATTTGGAGCTGCTATATGTTCCATATGGCATGGACAATGGCTTTGTCAACCCGTTTACTCCCAACTTCTCAATGACCGCTTTGGAAAAAGTACTTAAAAGTGGGGCAAATGGAATAGATACCGAAAATGAAAAGGAAGCCTCACAGAAGAAAAAGGAGGTTATAATTAGAGGTGTCCTTTCAATAACTGTAATATCTGCCGAAGACTTGCCACCTGTTGATCTGATGGGGAAAGCTGATCCTTATGTGGTTATCACCTTGAAGAAATCAGAAACGAGAAACAAAACTAGGGTTGTTAACGACAGCTTGAATCCTGTTTGGAATCAAACTTTTGACTTTGTTGTTGAGGATGGATTGCATGACATGCTCATTCTTGAAGTCTATGACCATGATACTTTCGGGAAGGATTATATGGGAAGATGCATCTTGACGCTCACTAGGGTCATATTAGAAGGGGAATACAAAGACACTTTACAGCTAGACGGGGCAAAATCTGGGAAGTTGAATATACATCTTAAGTGGATGCCACAACCAATTTTCCGTGATTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005783 GO:0008150 GO:0009888 GO:0010073 GO:0012505 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048507 GO:0048856

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PA Peptidase_M28 TFR_dimer

Protein Analysis

565

Amino Acids

63.32

Weight (kDa)

5.96

Isoelectric Point (pI)

28.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SMP_LBD	PF17047	70 - 248	1.6e-13	Synaptotagmin-like mitochondrial-lipid-binding domain
C2	PF00168	262 - 366	4.2e-25	C2 domain
C2	PF00168	440 - 538	1.2e-26	C2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008624)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19740
fragaria_vesca	FvH4_1g06360 FvH4_1g06360 FvH4_6g31420 FvH4_6g31420 FvH4_6g31420
malus_domestica	MD02G1067100.v1.1 MD02G1067200.v1.1
prunus_persica	Prupe.7G218300_v2.0.a1 Prupe.7G218300_v2.0.a1 Prupe.7G218300_v2.0.a1
pyrus_communis	pycom02g05310
rosa_chinensis	RchiOBHm_Chr2g0092051
rosa_laevigata	RLG00000016272
rosa_multiflora	Rmu_sc0000524.1_g000005
rosa_roxburghii	Rroxscaffold_2G00149510
rosa_rugosa	Rorug02G0022600 Rorug02G0022700
rosa_samantha	Rh2AG068300 Rh2BG067600 Rh2CG068900 Rh2DG067200
rosa_wichuraiana	Rw2G005290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1310
AarI	CACCTGC	2 cut(s)	493, 1132
Acc36I	ACCTGC	2 cut(s)	493, 1132
AccB1I	GGYRCC	1 cut(s)	367
AccB7I	CCANNNNNTGG	1 cut(s)	575
AccBSI	CCGCTC	1 cut(s)	84
AccII	CGCG	1 cut(s)	693
AciI	CCGC	5 cut(s)	79, 82, 120, 371, 1224
AclWI	GGATC	1 cut(s)	1379
AcoI	YGGCCR	2 cut(s)	105, 245
AcsI	RAATTY	3 cut(s)	610, 950, 993
AcuI	CTGAAG	2 cut(s)	270, 1046
AfaI	GTAC	5 cut(s)	311, 361, 857, 1047, 1239
AfiI	CCNNNNNNNGG	4 cut(s)	93, 184, 575, 1141
AflII	CTTAAG	1 cut(s)	1661
AjnI	CCWGG	2 cut(s)	658, 748
AloI	GAACNNNNNNTCC	2 cut(s)	68, 100
Alw21I	GWGCWC	2 cut(s)	1029, 1042
AlwI	GGATC	1 cut(s)	1379
AlwNI	CAGNNNCTG	1 cut(s)	269
Ama87I	CYCGRG	1 cut(s)	71
AoxI	GGCC	4 cut(s)	105, 245, 719, 1009
ApeKI	GCWGC	2 cut(s)	263, 1156
ApoI	RAATTY	3 cut(s)	610, 950, 993
ArsI	GACNNNNNNTTYG	2 cut(s)	1172, 1204
AspS9I	GGNCC	1 cut(s)	1009
AsuC2I	CCSGG	1 cut(s)	1068
AsuHPI	GGTGA	6 cut(s)	221, 419, 517, 653, 808, 1393
AsuII	TTCGAA	1 cut(s)	727
AvaI	CYCGRG	1 cut(s)	71
BalI	TGGCCA	1 cut(s)	107
BanI	GGYRCC	1 cut(s)	367
BanII	GRGCYC	2 cut(s)	45, 1029
BbsI	GAAGAC	2 cut(s)	184, 1356
Bbv12I	GWGCWC	2 cut(s)	1029, 1042
BbvI	GCAGC	2 cut(s)	275, 1143
BccI	CCATC	3 cut(s)	437, 1366, 1490
BceAI	ACGGC	1 cut(s)	232
BcgI	CGANNNNNNTGC	2 cut(s)	19, 53
BciT130I	CCWGG	2 cut(s)	660, 750
BcnI	CCSGG	1 cut(s)	1068
BfaI	CTAG	5 cut(s)	150, 791, 1434, 1584, 1625
BfrI	CTTAAG	1 cut(s)	1661
BfuAI	ACCTGC	2 cut(s)	493, 1132
BglII	AGATCT	1 cut(s)	240
BisI	GCNGC	4 cut(s)	82, 120, 264, 1157
BlsI	GCNGC	4 cut(s)	83, 121, 265, 1158
BmcAI	AGTACT	1 cut(s)	1239
Bme1390I	CCNGG	3 cut(s)	660, 750, 1068
BmeT110I	CYCGRG	1 cut(s)	71
BmgT120I	GGNCC	1 cut(s)	1009
BmiI	GGNNCC	2 cut(s)	294, 369
BmrFI	CCNGG	3 cut(s)	660, 750, 1068
BmrI	ACTGGG	1 cut(s)	534
BmsI	GCATC	6 cut(s)	39, 685, 1028, 1556, 1578, 1659
BmuI	ACTGGG	1 cut(s)	534
BpiI	GAAGAC	2 cut(s)	184, 1356
BpmI	CTGGAG	2 cut(s)	323, 788
Bpu10I	CCTNAGC	1 cut(s)	1041
Bpu14I	TTCGAA	1 cut(s)	727
BpuEI	CTTGAG	2 cut(s)	616, 698
BpuMI	CCSGG	1 cut(s)	1068
BsaBI	GATNNNNATC	1 cut(s)	447
BsaJI	CCNNGG	3 cut(s)	749, 1012, 1135
BsaWI	WCCGGW	1 cut(s)	93
BsaXI	ACNNNNNCTCC	4 cut(s)	68, 98, 648, 678
Bsc4I	CCNNNNNNNGG	4 cut(s)	93, 184, 575, 1141
Bse1I	ACTGG	2 cut(s)	529, 562
Bse8I	GATNNNNATC	1 cut(s)	447
BseBI	CCWGG	2 cut(s)	660, 750
BseDI	CCNNGG	3 cut(s)	749, 1012, 1135
BseGI	GGATG	5 cut(s)	448, 1019, 1087, 1501, 1674
BseJI	GATNNNNATC	1 cut(s)	447
BseLI	CCNNNNNNNGG	4 cut(s)	93, 184, 575, 1141
BseMII	CTCAG	3 cut(s)	212, 261, 1055
BseNI	ACTGG	2 cut(s)	529, 562
BseRI	GAGGAG	2 cut(s)	149, 417
BseXI	GCAGC	2 cut(s)	275, 1143
BsgI	GTGCAG	2 cut(s)	521, 827
Bsh1236I	CGCG	1 cut(s)	693
BshFI	GGCC	4 cut(s)	107, 247, 721, 1011
BshNI	GGYRCC	1 cut(s)	367
BsiHKAI	GWGCWC	2 cut(s)	1029, 1042
BsiHKCI	CYCGRG	1 cut(s)	71
BsiSI	CCGG	2 cut(s)	94, 1067
BsiWI	CGTACG	1 cut(s)	855
BslFI	GGGAC	1 cut(s)	697
BslI	CCNNNNNNNGG	4 cut(s)	93, 184, 575, 1141
BsmFI	GGGAC	1 cut(s)	697
BsnI	GGCC	4 cut(s)	107, 247, 721, 1011
BsoBI	CYCGRG	1 cut(s)	71
Bsp119I	TTCGAA	1 cut(s)	727
Bsp1286I	GDGCHC	3 cut(s)	45, 1029, 1042
Bsp143I	GATC	5 cut(s)	240, 670, 763, 1366, 1384
BspACI	CCGC	5 cut(s)	79, 82, 120, 371, 1224
BspANI	GGCC	4 cut(s)	107, 247, 721, 1011
BspCNI	CTCAG	3 cut(s)	211, 262, 1054
BspFNI	CGCG	1 cut(s)	693
BspLI	GGNNCC	2 cut(s)	294, 369
BspMI	ACCTGC	2 cut(s)	493, 1132
BspPI	GGATC	1 cut(s)	1379
BspT104I	TTCGAA	1 cut(s)	727
BspT107I	GGYRCC	1 cut(s)	367
BspTI	CTTAAG	1 cut(s)	1661
BsrBI	CCGCTC	1 cut(s)	84
BsrI	ACTGG	2 cut(s)	529, 562
BssECI	CCNNGG	3 cut(s)	749, 1012, 1135
BssMI	GATC	5 cut(s)	240, 670, 763, 1366, 1384
BssT1I	CCWWGG	1 cut(s)	1012
Bst2UI	CCWGG	2 cut(s)	660, 750
Bst4CI	ACNGT	8 cut(s)	115, 139, 364, 413, 761, 781, 1136, 1336
BstAFI	CTTAAG	1 cut(s)	1661
BstAPI	GCANNNNNTGC	1 cut(s)	1510
BstBI	TTCGAA	1 cut(s)	727
BstC8I	GCNNGC	2 cut(s)	105, 810
BstDEI	CTNAG	3 cut(s)	198, 270, 1041
BstDSI	CCRYGG	1 cut(s)	1135
BstF5I	GGATG	5 cut(s)	448, 1019, 1087, 1501, 1674
BstFNI	CGCG	1 cut(s)	693
BstKTI	GATC	5 cut(s)	243, 673, 766, 1369, 1387
BstMBI	GATC	5 cut(s)	240, 670, 763, 1366, 1384
BstMWI	GCNNNNNNNGC	4 cut(s)	125, 313, 1153, 1510
BstNI	CCWGG	2 cut(s)	660, 750
BstNSI	RCATGY	1 cut(s)	1513
BstSCI	CCNGG	3 cut(s)	658, 748, 1066
BstUI	CGCG	1 cut(s)	693
BstV1I	GCAGC	2 cut(s)	275, 1143
BstV2I	GAAGAC	2 cut(s)	184, 1356
BstX2I	RGATCY	1 cut(s)	240
BstYI	RGATCY	1 cut(s)	240
BsuRI	GGCC	4 cut(s)	107, 247, 721, 1011
BtgI	CCRYGG	1 cut(s)	1135
BtgZI	GCGATG	1 cut(s)	708
BtsCI	GGATG	5 cut(s)	448, 1019, 1087, 1501, 1674
BtsI	GCAGTG	1 cut(s)	443
BtsIMutI	CAGTG	5 cut(s)	294, 418, 443, 522, 766
BveI	ACCTGC	2 cut(s)	493, 1132
Cac8I	GCNNGC	2 cut(s)	105, 810
CaiI	CAGNNNCTG	1 cut(s)	269
Cfr13I	GGNCC	1 cut(s)	1009
CseI	GACGC	2 cut(s)	191, 1585
Csp6I	GTAC	5 cut(s)	310, 360, 856, 1046, 1238
CviAII	CATG	6 cut(s)	570, 717, 1177, 1505, 1510, 1535
CviQI	GTAC	5 cut(s)	310, 360, 856, 1046, 1238
DdeI	CTNAG	3 cut(s)	198, 270, 1041
DpnI	GATC	5 cut(s)	242, 672, 765, 1368, 1386
DpnII	GATC	5 cut(s)	240, 670, 763, 1366, 1384
DraI	TTTAAA	1 cut(s)	882
EaeI	YGGCCR	2 cut(s)	105, 245
Ecl136II	GAGCTC	1 cut(s)	1027
Eco130I	CCWWGG	1 cut(s)	1012
Eco24I	GRGCYC	2 cut(s)	45, 1029
Eco53kI	GAGCTC	1 cut(s)	1027
Eco57I	CTGAAG	2 cut(s)	270, 1046
Eco88I	CYCGRG	1 cut(s)	71
EcoICRI	GAGCTC	1 cut(s)	1027
EcoO109I	RGGNCCY	1 cut(s)	1009
EcoRII	CCWGG	2 cut(s)	658, 748
EcoT14I	CCWWGG	1 cut(s)	1012
EcoT22I	ATGCAT	1 cut(s)	1571
EcoT38I	GRGCYC	2 cut(s)	45, 1029
ErhI	CCWWGG	1 cut(s)	1012
FaeI	CATG	6 cut(s)	573, 720, 1180, 1508, 1513, 1538
FalI	AAGNNNNNCTT	2 cut(s)	660, 692
FaqI	GGGAC	1 cut(s)	697
FatI	CATG	6 cut(s)	569, 716, 1176, 1504, 1509, 1534
FauNDI	CATATG	1 cut(s)	1171
Fnu4HI	GCNGC	4 cut(s)	82, 120, 264, 1157
FokI	GGATG	5 cut(s)	455, 1006, 1094, 1508, 1681
FriOI	GRGCYC	2 cut(s)	45, 1029
Fsp4HI	GCNGC	4 cut(s)	82, 120, 264, 1157
FspBI	CTAG	5 cut(s)	150, 791, 1434, 1584, 1625
GluI	GCNGC	4 cut(s)	82, 120, 264, 1157
GsuI	CTGGAG	2 cut(s)	323, 788
HaeIII	GGCC	4 cut(s)	107, 247, 721, 1011
HapII	CCGG	2 cut(s)	94, 1067
HgaI	GACGC	2 cut(s)	191, 1585
Hin1II	CATG	6 cut(s)	573, 720, 1180, 1508, 1513, 1538
HincII	GTYRAC	4 cut(s)	559, 822, 1195, 1444
HindII	GTYRAC	4 cut(s)	559, 822, 1195, 1444
HindIII	AAGCTT	1 cut(s)	800
HinfI	GANTC	9 cut(s)	146, 519, 663, 707, 925, 968, 1456, 1468, 1691
HpaI	GTTAAC	1 cut(s)	1444
HpaII	CCGG	2 cut(s)	94, 1067
HphI	GGTGA	6 cut(s)	221, 419, 517, 653, 808, 1393
Hpy166II	GTNNAC	7 cut(s)	312, 351, 559, 822, 1195, 1203, 1444
Hpy188I	TCNGA	7 cut(s)	207, 271, 518, 850, 1024, 1371, 1417
Hpy8I	GTNNAC	7 cut(s)	312, 351, 559, 822, 1195, 1203, 1444
Hpy99I	CGWCG	6 cut(s)	38, 41, 56, 59, 119, 143
HpyAV	CCTTC	5 cut(s)	189, 392, 1072, 1543, 1592
HpyCH4III	ACNGT	8 cut(s)	115, 139, 364, 413, 761, 781, 1136, 1336
HpyCH4IV	ACGT	1 cut(s)	834
HpyCH4V	TGCA	7 cut(s)	436, 502, 653, 808, 1147, 1504, 1569
HpyF10VI	GCNNNNNNNGC	4 cut(s)	125, 313, 1153, 1510
HpyF3I	CTNAG	3 cut(s)	198, 270, 1041
HpySE526I	ACGT	1 cut(s)	834
Hsp92II	CATG	6 cut(s)	573, 720, 1180, 1508, 1513, 1538
KspAI	GTTAAC	1 cut(s)	1444
Kzo9I	GATC	5 cut(s)	240, 670, 763, 1366, 1384
LmnI	GCTCC	7 cut(s)	89, 96, 162, 292, 304, 578, 1153
Lsp1109I	GCAGC	2 cut(s)	275, 1143
LweI	GCATC	6 cut(s)	39, 685, 1028, 1556, 1578, 1659
MaeI	CTAG	5 cut(s)	150, 791, 1434, 1584, 1625
MaeII	ACGT	1 cut(s)	834
MaeIII	GTNAC	4 cut(s)	96, 407, 415, 641
MalI	GATC	5 cut(s)	242, 672, 765, 1368, 1386
MbiI	CCGCTC	1 cut(s)	84
MboI	GATC	5 cut(s)	240, 670, 763, 1366, 1384
MflI	RGATCY	1 cut(s)	240
MhlI	GDGCHC	3 cut(s)	45, 1029, 1042
MlsI	TGGCCA	1 cut(s)	107
MluNI	TGGCCA	1 cut(s)	107
MlyI	GAGTC	2 cut(s)	657, 934
MmeI	TCCRAC	2 cut(s)	408, 820
Mox20I	TGGCCA	1 cut(s)	107
Mph1103I	ATGCAT	1 cut(s)	1571
MscI	TGGCCA	1 cut(s)	107
MslI	CAYNNNNRTG	1 cut(s)	317
Msp20I	TGGCCA	1 cut(s)	107
MspA1I	CMGCKG	1 cut(s)	103
MspCI	CTTAAG	1 cut(s)	1661
MspI	CCGG	2 cut(s)	94, 1067
MspR9I	CCNGG	3 cut(s)	660, 750, 1068
MvaI	CCWGG	2 cut(s)	660, 750
MvnI	CGCG	1 cut(s)	693
MwoI	GCNNNNNNNGC	4 cut(s)	125, 313, 1153, 1510
NciI	CCSGG	1 cut(s)	1068
NdeI	CATATG	1 cut(s)	1171
NdeII	GATC	5 cut(s)	240, 670, 763, 1366, 1384
NlaIII	CATG	6 cut(s)	573, 720, 1180, 1508, 1513, 1538
NlaIV	GGNNCC	2 cut(s)	294, 369
NmeAIII	GCCGAG	1 cut(s)	6
NmuCI	GTSAC	4 cut(s)	96, 407, 415, 641
NsiI	ATGCAT	1 cut(s)	1571
NspI	RCATGY	1 cut(s)	1513
NspV	TTCGAA	1 cut(s)	727
PaeR7I	CTCGAG	1 cut(s)	71
PaqCI	CACCTGC	2 cut(s)	493, 1132
PcsI	WCGNNNNNNNCGW	3 cut(s)	33, 60, 69
PfeI	GAWTC	7 cut(s)	146, 519, 707, 968, 1456, 1468, 1691
Pfl23II	CGTACG	1 cut(s)	855
PflFI	GACNNNGTC	1 cut(s)	413
PflMI	CCANNNNNTGG	1 cut(s)	575
PkrI	GCNGC	4 cut(s)	83, 121, 265, 1158
PleI	GAGTC	2 cut(s)	657, 933
PpsI	GAGTC	2 cut(s)	657, 933
PsiI	TTATAA	1 cut(s)	1310
Psp124BI	GAGCTC	1 cut(s)	1029
Psp6I	CCWGG	2 cut(s)	658, 748
PspGI	CCWGG	2 cut(s)	658, 748
PspLI	CGTACG	1 cut(s)	855
PspN4I	GGNNCC	2 cut(s)	294, 369
PspPI	GGNCC	1 cut(s)	1009
PstNI	CAGNNNCTG	1 cut(s)	269
PsuI	RGATCY	1 cut(s)	240
PsyI	GACNNNGTC	1 cut(s)	413
PvuII	CAGCTG	1 cut(s)	103
RsaI	GTAC	5 cut(s)	311, 361, 857, 1047, 1239
RsaNI	GTAC	5 cut(s)	310, 360, 856, 1046, 1238
RseI	CAYNNNNRTG	1 cut(s)	317
SacI	GAGCTC	1 cut(s)	1029
SatI	GCNGC	4 cut(s)	82, 120, 264, 1157
Sau3AI	GATC	5 cut(s)	240, 670, 763, 1366, 1384
Sau96I	GGNCC	1 cut(s)	1009
ScaI	AGTACT	1 cut(s)	1239
SchI	GAGTC	2 cut(s)	657, 934
ScrFI	CCNGG	3 cut(s)	660, 750, 1068
SduI	GDGCHC	3 cut(s)	45, 1029, 1042
SfaNI	GCATC	6 cut(s)	39, 685, 1028, 1556, 1578, 1659
Sfr274I	CTCGAG	1 cut(s)	71
SfuI	TTCGAA	1 cut(s)	727
SlaI	CTCGAG	1 cut(s)	71
SmiMI	CAYNNNNRTG	1 cut(s)	317
SmlI	CTYRAG	4 cut(s)	71, 595, 677, 1661
SmoI	CTYRAG	4 cut(s)	71, 595, 677, 1661
SsiI	CCGC	5 cut(s)	79, 82, 120, 371, 1224
SspMI	CTAG	5 cut(s)	150, 791, 1434, 1584, 1625
SstI	GAGCTC	1 cut(s)	1029
StyD4I	CCNGG	3 cut(s)	658, 748, 1066
StyI	CCWWGG	1 cut(s)	1012
TaaI	ACNGT	8 cut(s)	115, 139, 364, 413, 761, 781, 1136, 1336
TaiI	ACGT	1 cut(s)	837
TaqI	TCGA	6 cut(s)	72, 130, 141, 710, 727, 874
TatI	WGTACW	2 cut(s)	309, 1237
TauI	GCSGC	2 cut(s)	84, 122
TfiI	GAWTC	7 cut(s)	146, 519, 707, 968, 1456, 1468, 1691
TscAI	CASTG	5 cut(s)	294, 418, 443, 529, 766
TseFI	GTSAC	4 cut(s)	96, 407, 415, 641
TseI	GCWGC	2 cut(s)	263, 1156
Tsp45I	GTSAC	4 cut(s)	96, 407, 415, 641
TspDTI	ATGAA	4 cut(s)	908, 954, 981, 1290
TspGWI	ACGGA	1 cut(s)	1676
TspRI	CASTG	5 cut(s)	294, 418, 443, 529, 766
Tth111I	GACNNNGTC	1 cut(s)	413
Van91I	CCANNNNNTGG	1 cut(s)	575
Vha464I	CTTAAG	1 cut(s)	1661
XapI	RAATTY	3 cut(s)	610, 950, 993
XbaI	TCTAGA	1 cut(s)	149
XceI	RCATGY	1 cut(s)	1513
XcmI	CCANNNNNNNNNTGG	1 cut(s)	979
XhoI	CTCGAG	1 cut(s)	71
XspI	CTAG	5 cut(s)	150, 791, 1434, 1584, 1625
ZrmI	AGTACT	1 cut(s)	1239
Zsp2I	ATGCAT	1 cut(s)	1571

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.