Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0008624

Physical Location & Seq

Genomic Coordinates Forward (+)

3368753 .. 3373453

Gene Structure 4701 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g06360.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2142 bp

ATGTTCCCCACAAATCCGACCCAAATGCTCAAACCAGTCACCGCGGCTTTCCTAGCCCTCCTCATCTCCTTCATCTTCCTCCTCTTCTTTCCATCAACCCCAAAATCCTCCTACCACTCCCTCTTCATCTCTGACTCCCTCTCCTCCAACGCCTCCATCTCCCGCCACCTACACACCCTCACCGGCCGCCCCCACGTCGCCGGAACCCCCGCCAACGCCGACGCCGCCGCCTACGTCCTCTCCATCTTCACCTCCTCCAATCTCAACTCCCGCATCACACCCTACCACGTCGCCCTCACTTACCCTATCTCCCGCTCCCTAACACTAACCCCTTCACCTTCTTCACCTCCCCTCAACTTTGACCTCCAACAAGAAACCTACCCCGGCGACCCTTATGCTGACGTGGCAGCCGAGGTCCTCCCCACTTTCCACGCCTTTGCCAAGTCCGGGGACGTGACCGGTGAAGTTGTGTACGTCAACTACGGGAGGTTGGAGGACTATGAGACTCTTAAGAATATGGGAGTCAACGTTTCTGGCACTATTGTGCTTGCTAGGTATGGAGAGATTTTCAGGGGGAGTATAGTGCAGATTGCATACGAGCAAGGGGCGATTGGGGCTTTGGTGTATACGGATAGGAAGGACTACGGCGGAGGAGGCGGAGGGAGGTGGTTTCCGGAGGAGAAGTGGCTGCCGCCGAGTGGGGTGCAGGTGGGGACGGTGTATAACGGGATAGGGGACCCGACAACGCCGGGGTGGGCGAGTAGTGAAGAGTGTGAGAGGCTTTCTGATGAGGAAGTGGAGAAGAGTGGGGACTTGACTTTGATACCTTCACTGCCTATTTCTGGTGCTGATGGTGAGGTTATTTTGAGGGCCATCGGAGGAAAAGTGGCGAATGATGATTGGCAGGGGAGTGGGGATGCCCCAACTTATAGGGTTGGTCCAGGTCCTGGGGTTGTGCATCTTAGTTACAATGGGAAGCAAGTTATAGAAAAAATTGAGAATGTGATTGGTGTCATAGAAGGTGAAGAAGAACCTGATAGATTTGTCATTCTAGGTAATCACCGCGATGCGTGGACATTTGGAGCTGTTGACCCAAATAGTGGAACTGCAGCACTGCTAGATATTGCTCAAAGATTGGGGAAGCTGCAGGAAAAAGGATGGAAACCTCGGCGCACAATTATCTTGTGCAATTGGGATGCTGAAGAATATGGCTTGATAGGATCAACTGAATGGGTAGAAGAAAACAGAGAAATGCTAGCTTCAAGGGCTATTGCTTACTTGAATGTCGACAGTGCAGTATATGCGCCAGGATTCTGGGCCTCTGCCACTCCACAGCTTGATGAACTTCTTAAACAAGCTACTCAACAGGTCAAAGATCCTGATAACTCATCACAAACTGTCTACCAAGCATGGGTTGGTTCCAGCAGTTCCCCTACAATTGGCAGGTTGGGAAGTGGAGAATCTGATTTTGCAGCTTTTGTTCAATATATTGGAATTCCATCAGTTGACATGGCTTTCGGTAGAGGATACCCAGTATACCATTCCATGTACGATGACTTTGTATGGATGGAAAAATTTGGTGATCCTTTCTTTCATAGGCATGTTGCAGTGGCCAGTTTATGGGGTTTGATAGCTCTTTGGCTAGCAGATGCAGAGTTTTTGCCTTTTGATTATACATCCTATGCACTGGAGCTGCAGAAATACATGAAGGATTTGGAAATTGAGATATCAGACAAGAACATAAACCTAACTCCTCTGTTCAAGTCTGTTGAGGAACTCAAAAAAGCAGCCACATTAATCAACAACCAGCAAAGGGAAATAAAACAAAACAATGGCTGGCCTTCTATAAGGAAGAAAGATCATTTTAAGGTGAGAGAGCTGAATGACAGACTAATGATGGCAGAGCGTGCGTTTACAGATCAAGATGGACTGTTTGGAAGGTCATGGTATAAGCATTTGGTTTATGGGCCCGCAAGAAATGATGATTACGGAACTAAATCATTCCCCGGCGTAGATGAGGCCACTGAAAAGGCAAAGAGACTGAACACAGCAGAGTCATGGAAATTTGTACAACATGAAGTTTGGAGAGTTGCTAGAGCTGTGAGACATGCAGCAATAGTCATCAATGGTGATCTATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005783 GO:0008150 GO:0009888 GO:0010073 GO:0012505 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048507 GO:0048856

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PA Peptidase_M28 TFR_dimer

Protein Analysis

714

Amino Acids

78.86

Weight (kDa)

5.18

Isoelectric Point (pI)

36.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PA	PF02225	152 - 236	1e-06	PA domain
Peptidase_M28	PF04389	334 - 520	3.1e-23	Peptidase family M28
TFR_dimer	PF04253	581 - 706	4e-32	Transferrin receptor-like dimerisation domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008624)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19740
fragaria_vesca	FvH4_1g06360 FvH4_1g06360 FvH4_6g31420 FvH4_6g31420 FvH4_6g31420
malus_domestica	MD02G1067100.v1.1 MD02G1067200.v1.1
prunus_persica	Prupe.7G218300_v2.0.a1 Prupe.7G218300_v2.0.a1 Prupe.7G218300_v2.0.a1
pyrus_communis	pycom02g05310
rosa_chinensis	RchiOBHm_Chr2g0092051
rosa_laevigata	RLG00000016272
rosa_multiflora	Rmu_sc0000524.1_g000005
rosa_roxburghii	Rroxscaffold_2G00149510
rosa_rugosa	Rorug02G0022600 Rorug02G0022700
rosa_samantha	Rh2AG068300 Rh2BG067600 Rh2CG068900 Rh2DG067200
rosa_wichuraiana	Rw2G005290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	697
Acc36I	ACCTGC	2 cut(s)	697, 1434
AccB7I	CCANNNNNTGG	3 cut(s)	947, 1100, 1620
AccBSI	CCGCTC	1 cut(s)	315
AccI	GTMKAC	4 cut(s)	626, 1287, 1401, 1536
AccII	CGCG	2 cut(s)	44, 1065
AccIII	TCCGGA	1 cut(s)	673
AclI	AACGTT	1 cut(s)	528
AclWI	GGATC	3 cut(s)	1228, 1370, 1577
AcoI	YGGCCR	2 cut(s)	184, 1611
AcsI	RAATTY	3 cut(s)	1494, 1574, 2063
AcuI	CTGAAG	1 cut(s)	1221
AcyI	GRCGYC	1 cut(s)	222
AfaI	GTAC	3 cut(s)	473, 1550, 2070
AfiI	CCNNNNNNNGG	9 cut(s)	447, 698, 842, 947, 1100, 1411, 1439, 1620, 1813
AflII	CTTAAG	1 cut(s)	509
AgeI	ACCGGT	1 cut(s)	458
AgsI	TTSAA	4 cut(s)	1263, 1282, 1484, 1762
AjiI	CACGTC	4 cut(s)	196, 289, 403, 454
AjnI	CCWGG	3 cut(s)	940, 946, 1306
AleI	CACNNNNGTG	1 cut(s)	542
Alw26I	GTCTC	3 cut(s)	497, 2032, 2098
AlwI	GGATC	3 cut(s)	1228, 1370, 1577
AlwNI	CAGNNNCTG	1 cut(s)	947
Aor13HI	TCCGGA	1 cut(s)	673
AoxI	GGCC	7 cut(s)	184, 870, 1317, 1611, 1838, 1967, 2019
ApaI	GGGCCC	1 cut(s)	1971
ApeKI	GCWGC	8 cut(s)	407, 688, 1109, 1144, 1472, 1693, 1787, 2111
ApoI	RAATTY	3 cut(s)	1494, 1574, 2063
ArsI	GACNNNNNNTTYG	2 cut(s)	1499, 1531
AseI	ATTAAT	1 cut(s)	1796
AsiGI	ACCGGT	1 cut(s)	458
AspLEI	GCGC	2 cut(s)	1173, 1306
AspS9I	GGNCC	8 cut(s)	415, 736, 870, 938, 944, 1317, 1967, 1968
AsuC2I	CCSGG	4 cut(s)	384, 448, 750, 2007
AsuNHI	GCTAGC	2 cut(s)	1255, 1642
AvaII	GGWCC	4 cut(s)	415, 736, 938, 944
BaeGI	GKGCMC	1 cut(s)	1971
BalI	TGGCCA	1 cut(s)	1613
BanII	GRGCYC	1 cut(s)	1971
BbvI	GCAGC	8 cut(s)	419, 675, 1121, 1131, 1484, 1680, 1799, 2123
BceAI	ACGGC	1 cut(s)	661
BcgI	CGANNNNNNTGC	6 cut(s)	7, 41, 377, 411, 685, 719
BciT130I	CCWGG	3 cut(s)	942, 948, 1308
BciVI	GTATCC	1 cut(s)	1520
BcnI	CCSGG	4 cut(s)	384, 448, 750, 2007
BcoDI	GTCTC	3 cut(s)	497, 2032, 2098
BfaI	CTAG	7 cut(s)	53, 552, 1052, 1118, 1256, 1643, 2094
BfmI	CTRYAG	3 cut(s)	1107, 1145, 1694
BfrI	CTTAAG	1 cut(s)	509
BfuAI	ACCTGC	2 cut(s)	697, 1434
BfuI	GTATCC	1 cut(s)	1520
Bme1390I	CCNGG	7 cut(s)	384, 448, 750, 942, 948, 1308, 2007
Bme18I	GGWCC	4 cut(s)	415, 736, 938, 944
BmgBI	CACGTC	4 cut(s)	196, 289, 403, 454
BmgT120I	GGNCC	8 cut(s)	415, 736, 870, 938, 944, 1317, 1967, 1968
BmiI	GGNNCC	5 cut(s)	205, 737, 738, 1420, 1969
BmrFI	CCNGG	7 cut(s)	384, 448, 750, 942, 948, 1308, 2007
BmrI	ACTGGG	1 cut(s)	1526
BmsI	GCATC	6 cut(s)	282, 907, 967, 1057, 1186, 1639
BmtI	GCTAGC	2 cut(s)	1259, 1646
BmuI	ACTGGG	1 cut(s)	1526
BpmI	CTGGAG	1 cut(s)	1709
BpuMI	CCSGG	4 cut(s)	384, 448, 750, 2007
BsaHI	GRCGYC	1 cut(s)	222
BsaJI	CCNNGG	8 cut(s)	42, 382, 411, 447, 749, 947, 1166, 2005
BsaWI	WCCGGW	2 cut(s)	458, 673
Bsc4I	CCNNNNNNNGG	9 cut(s)	447, 698, 842, 947, 1100, 1411, 1439, 1620, 1813
Bse118I	RCCGGY	2 cut(s)	182, 458
Bse1I	ACTGG	4 cut(s)	35, 1532, 1614, 1692
BseAI	TCCGGA	1 cut(s)	673
BseBI	CCWGG	3 cut(s)	942, 948, 1308
BseDI	CCNNGG	8 cut(s)	42, 382, 411, 447, 749, 947, 1166, 2005
BseGI	GGATG	5 cut(s)	922, 1163, 1201, 1572, 1676
BseLI	CCNNNNNNNGG	9 cut(s)	447, 698, 842, 947, 1100, 1411, 1439, 1620, 1813
BseNI	ACTGG	4 cut(s)	35, 1532, 1614, 1692
BseRI	GAGGAG	7 cut(s)	50, 71, 133, 244, 666, 692, 1743
BseSI	GKGCMC	1 cut(s)	1971
BseX3I	CGGCCG	1 cut(s)	184
BseXI	GCAGC	8 cut(s)	419, 675, 1121, 1131, 1484, 1680, 1799, 2123
BsgI	GTGCAG	3 cut(s)	605, 725, 1314
Bsh1236I	CGCG	2 cut(s)	44, 1065
Bsh1285I	CGRYCG	1 cut(s)	187
BshFI	GGCC	7 cut(s)	186, 872, 1319, 1613, 1840, 1969, 2021
BshTI	ACCGGT	1 cut(s)	458
BsiEI	CGRYCG	1 cut(s)	187
BsiSI	CCGG	8 cut(s)	183, 201, 384, 447, 459, 674, 749, 2007
BslFI	GGGAC	4 cut(s)	464, 727, 749, 824
BslI	CCNNNNNNNGG	9 cut(s)	447, 698, 842, 947, 1100, 1411, 1439, 1620, 1813
BsmAI	GTCTC	3 cut(s)	497, 2032, 2098
BsmFI	GGGAC	4 cut(s)	464, 727, 749, 824
BsnI	GGCC	7 cut(s)	186, 872, 1319, 1613, 1840, 1969, 2021
Bsp120I	GGGCCC	1 cut(s)	1967
Bsp1286I	GDGCHC	1 cut(s)	1971
Bsp13I	TCCGGA	1 cut(s)	673
Bsp1407I	TGTACA	1 cut(s)	2068
Bsp143I	GATC	6 cut(s)	1220, 1375, 1582, 1858, 1918, 2131
BspANI	GGCC	7 cut(s)	186, 872, 1319, 1613, 1840, 1969, 2021
BspEI	TCCGGA	1 cut(s)	673
BspFNI	CGCG	2 cut(s)	44, 1065
BspHI	TCATGA	1 cut(s)	2138
BspLI	GGNNCC	5 cut(s)	205, 737, 738, 1420, 1969
BspMAI	CTGCAG	3 cut(s)	1111, 1149, 1698
BspMI	ACCTGC	2 cut(s)	697, 1434
BspOI	GCTAGC	2 cut(s)	1259, 1646
BspPI	GGATC	3 cut(s)	1228, 1370, 1577
BspTI	CTTAAG	1 cut(s)	509
BsrBI	CCGCTC	1 cut(s)	315
BsrFI	RCCGGY	2 cut(s)	182, 458
BsrGI	TGTACA	1 cut(s)	2068
BsrI	ACTGG	4 cut(s)	35, 1532, 1614, 1692
BssAI	RCCGGY	2 cut(s)	182, 458
BssECI	CCNNGG	8 cut(s)	42, 382, 411, 447, 749, 947, 1166, 2005
BssMI	GATC	6 cut(s)	1220, 1375, 1582, 1858, 1918, 2131
BssNAI	GTATAC	2 cut(s)	627, 1537
BssNI	GRCGYC	1 cut(s)	222
Bst1107I	GTATAC	2 cut(s)	627, 1537
Bst2UI	CCWGG	3 cut(s)	942, 948, 1308
Bst4CI	ACNGT	4 cut(s)	718, 1292, 1399, 1932
Bst6I	CTCTTC	4 cut(s)	89, 128, 762, 797
BstACI	GRCGYC	1 cut(s)	222
BstAFI	CTTAAG	1 cut(s)	509
BstAPI	GCANNNNNTGC	2 cut(s)	1301, 1907
BstAUI	TGTACA	1 cut(s)	2068
BstC8I	GCNNGC	6 cut(s)	549, 1257, 1644, 1838, 1908, 1971
BstDEI	CTNAG	1 cut(s)	962
BstDSI	CCRYGG	1 cut(s)	42
BstF5I	GGATG	5 cut(s)	922, 1163, 1201, 1572, 1676
BstFNI	CGCG	2 cut(s)	44, 1065
BstHHI	GCGC	2 cut(s)	1173, 1306
BstKTI	GATC	6 cut(s)	1223, 1378, 1585, 1861, 1921, 2134
BstMAI	GTCTC	3 cut(s)	497, 2032, 2098
BstMBI	GATC	6 cut(s)	1220, 1375, 1582, 1858, 1918, 2131
BstMCI	CGRYCG	1 cut(s)	187
BstMWI	GCNNNNNNNGC	8 cut(s)	53, 224, 404, 614, 654, 1265, 1301, 1907
BstNI	CCWGG	3 cut(s)	942, 948, 1308
BstNSI	RCATGY	2 cut(s)	1604, 2111
BstSCI	CCNGG	7 cut(s)	382, 446, 748, 940, 946, 1306, 2005
BstSFI	CTRYAG	3 cut(s)	1107, 1145, 1694
BstSLI	GKGCMC	1 cut(s)	1971
BstUI	CGCG	2 cut(s)	44, 1065
BstV1I	GCAGC	8 cut(s)	419, 675, 1121, 1131, 1484, 1680, 1799, 2123
BstX2I	RGATCY	1 cut(s)	1375
BstXI	CCANNNNNNTGG	1 cut(s)	1314
BstYI	RGATCY	1 cut(s)	1375
BstZ17I	GTATAC	2 cut(s)	627, 1537
BstZI	CGGCCG	1 cut(s)	184
BsuI	GTATCC	1 cut(s)	1520
BsuRI	GGCC	7 cut(s)	186, 872, 1319, 1613, 1840, 1969, 2021
BtgI	CCRYGG	1 cut(s)	42
BtgZI	GCGATG	1 cut(s)	1080
BtrI	CACGTC	4 cut(s)	196, 289, 403, 454
BtsCI	GGATG	5 cut(s)	922, 1163, 1201, 1572, 1676
BtsI	GCAGTG	3 cut(s)	830, 1112, 1614
BtsIMutI	CAGTG	6 cut(s)	830, 1112, 1297, 1614, 1685, 2022
BveI	ACCTGC	2 cut(s)	697, 1434
Cac8I	GCNNGC	6 cut(s)	549, 1257, 1644, 1838, 1908, 1971
CaiI	CAGNNNCTG	1 cut(s)	947
CciI	TCATGA	1 cut(s)	2138
CfoI	GCGC	2 cut(s)	1173, 1306
Cfr10I	RCCGGY	2 cut(s)	182, 458
Cfr13I	GGNCC	8 cut(s)	415, 736, 870, 938, 944, 1317, 1967, 1968
Cfr42I	CCGCGG	1 cut(s)	45
CseI	GACGC	1 cut(s)	230
Csp6I	GTAC	3 cut(s)	472, 1549, 2069
CspAI	ACCGGT	1 cut(s)	458
CviQI	GTAC	3 cut(s)	472, 1549, 2069
DdeI	CTNAG	1 cut(s)	962
DpnI	GATC	6 cut(s)	1222, 1377, 1584, 1860, 1920, 2133
DpnII	GATC	6 cut(s)	1220, 1375, 1582, 1858, 1918, 2131
EaeI	YGGCCR	2 cut(s)	184, 1611
EagI	CGGCCG	1 cut(s)	184
Eam1104I	CTCTTC	4 cut(s)	89, 128, 762, 797
EarI	CTCTTC	4 cut(s)	89, 128, 762, 797
EciI	GGCGGA	2 cut(s)	663, 672
EclXI	CGGCCG	1 cut(s)	184
Eco24I	GRGCYC	1 cut(s)	1971
Eco32I	GATATC	1 cut(s)	1728
Eco47I	GGWCC	4 cut(s)	415, 736, 938, 944
Eco52I	CGGCCG	1 cut(s)	184
Eco57I	CTGAAG	1 cut(s)	1221
EcoO109I	RGGNCCY	3 cut(s)	415, 736, 944
EcoRI	GAATTC	1 cut(s)	1494
EcoRII	CCWGG	3 cut(s)	940, 946, 1306
EcoRV	GATATC	1 cut(s)	1728
EcoT38I	GRGCYC	1 cut(s)	1971
FaqI	GGGAC	4 cut(s)	464, 727, 749, 824
FauI	CCCGC	5 cut(s)	170, 217, 278, 320, 1978
FblI	GTMKAC	4 cut(s)	626, 1287, 1401, 1536
FokI	GGATG	5 cut(s)	929, 1170, 1208, 1579, 1663
FriOI	GRGCYC	1 cut(s)	1971
FspBI	CTAG	7 cut(s)	53, 552, 1052, 1118, 1256, 1643, 2094
GlaI	GCGC	2 cut(s)	1172, 1305
GsuI	CTGGAG	1 cut(s)	1709
HaeIII	GGCC	7 cut(s)	186, 872, 1319, 1613, 1840, 1969, 2021
HapII	CCGG	8 cut(s)	183, 201, 384, 447, 459, 674, 749, 2007
HgaI	GACGC	1 cut(s)	230
HhaI	GCGC	2 cut(s)	1173, 1306
Hin1I	GRCGYC	1 cut(s)	222
Hin6I	GCGC	2 cut(s)	1171, 1304
HinP1I	GCGC	2 cut(s)	1171, 1304
HincII	GTYRAC	5 cut(s)	478, 526, 1090, 1288, 1507
HindII	GTYRAC	5 cut(s)	478, 526, 1090, 1288, 1507
HinfI	GANTC	6 cut(s)	134, 505, 522, 1311, 1460, 2054
HpaII	CCGG	8 cut(s)	183, 201, 384, 447, 459, 674, 749, 2007
Hpy188I	TCNGA	6 cut(s)	18, 133, 787, 878, 1465, 1732
Hpy188III	TCNNGA	4 cut(s)	674, 1379, 1922, 2139
Hpy99I	CGWCG	3 cut(s)	200, 224, 293
HpyAV	CCTTC	9 cut(s)	79, 342, 348, 631, 837, 1013, 1702, 1851, 1932
HpyCH4III	ACNGT	4 cut(s)	718, 1292, 1399, 1932
HpyCH4IV	ACGT	7 cut(s)	195, 234, 288, 402, 453, 474, 528
HpyF10VI	GCNNNNNNNGC	8 cut(s)	53, 224, 404, 614, 654, 1265, 1301, 1907
HpyF3I	CTNAG	1 cut(s)	962
HpySE526I	ACGT	7 cut(s)	195, 234, 288, 402, 453, 474, 528
Hsp92I	GRCGYC	1 cut(s)	222
HspAI	GCGC	2 cut(s)	1171, 1304
KflI	GGGWCCC	1 cut(s)	736
Kpn2I	TCCGGA	1 cut(s)	673
KspI	CCGCGG	1 cut(s)	45
Kzo9I	GATC	6 cut(s)	1220, 1375, 1582, 1858, 1918, 2131
LmnI	GCTCC	3 cut(s)	320, 1082, 1690
Lsp1109I	GCAGC	8 cut(s)	419, 675, 1121, 1131, 1484, 1680, 1799, 2123
LweI	GCATC	6 cut(s)	282, 907, 967, 1057, 1186, 1639
MaeI	CTAG	7 cut(s)	53, 552, 1052, 1118, 1256, 1643, 2094
MaeII	ACGT	7 cut(s)	195, 234, 288, 402, 453, 474, 528
MaeIII	GTNAC	3 cut(s)	37, 454, 965
MalI	GATC	6 cut(s)	1222, 1377, 1584, 1860, 1920, 2133
MbiI	CCGCTC	1 cut(s)	315
MboI	GATC	6 cut(s)	1220, 1375, 1582, 1858, 1918, 2131
MfeI	CAATTG	2 cut(s)	1189, 1437
MflI	RGATCY	1 cut(s)	1375
MhlI	GDGCHC	1 cut(s)	1971
MlsI	TGGCCA	1 cut(s)	1613
MluCI	AATT	8 cut(s)	993, 1176, 1189, 1437, 1494, 1574, 1719, 2063
MluNI	TGGCCA	1 cut(s)	1613
MlyI	GAGTC	4 cut(s)	128, 499, 531, 2063
MmeI	TCCRAC	4 cut(s)	41, 171, 391, 471
Mox20I	TGGCCA	1 cut(s)	1613
MroI	TCCGGA	1 cut(s)	673
MscI	TGGCCA	1 cut(s)	1613
MseI	TTAA	4 cut(s)	510, 1350, 1796, 1866
MslI	CAYNNNNRTG	3 cut(s)	542, 1065, 1599
Msp20I	TGGCCA	1 cut(s)	1613
MspA1I	CMGCKG	1 cut(s)	44
MspCI	CTTAAG	1 cut(s)	509
MspI	CCGG	8 cut(s)	183, 201, 384, 447, 459, 674, 749, 2007
MspR9I	CCNGG	7 cut(s)	384, 448, 750, 942, 948, 1308, 2007
MunI	CAATTG	2 cut(s)	1189, 1437
MvaI	CCWGG	3 cut(s)	942, 948, 1308
MvnI	CGCG	2 cut(s)	44, 1065
MwoI	GCNNNNNNNGC	8 cut(s)	53, 224, 404, 614, 654, 1265, 1301, 1907
NciI	CCSGG	4 cut(s)	384, 448, 750, 2007
NdeII	GATC	6 cut(s)	1220, 1375, 1582, 1858, 1918, 2131
NheI	GCTAGC	2 cut(s)	1255, 1642
NlaIV	GGNNCC	5 cut(s)	205, 737, 738, 1420, 1969
NmeAIII	GCCGAG	3 cut(s)	436, 720, 1147
NmuCI	GTSAC	2 cut(s)	37, 454
NspI	RCATGY	2 cut(s)	1604, 2111
OliI	CACNNNNGTG	1 cut(s)	542
PagI	TCATGA	1 cut(s)	2138
PaqCI	CACCTGC	1 cut(s)	697
PcsI	WCGNNNNNNNCGW	1 cut(s)	408
PfeI	GAWTC	2 cut(s)	1311, 1460
PflMI	CCANNNNNTGG	3 cut(s)	947, 1100, 1620
PinAI	ACCGGT	1 cut(s)	458
PleI	GAGTC	4 cut(s)	128, 499, 530, 2062
PpsI	GAGTC	4 cut(s)	128, 499, 530, 2062
PpuMI	RGGWCCY	3 cut(s)	415, 736, 944
PshBI	ATTAAT	1 cut(s)	1796
Psp1406I	AACGTT	1 cut(s)	528
Psp5II	RGGWCCY	3 cut(s)	415, 736, 944
Psp6I	CCWGG	3 cut(s)	940, 946, 1306
PspGI	CCWGG	3 cut(s)	940, 946, 1306
PspN4I	GGNNCC	5 cut(s)	205, 737, 738, 1420, 1969
PspOMI	GGGCCC	1 cut(s)	1967
PspPI	GGNCC	8 cut(s)	415, 736, 870, 938, 944, 1317, 1967, 1968
PspPPI	RGGWCCY	3 cut(s)	415, 736, 944
PstI	CTGCAG	3 cut(s)	1111, 1149, 1698
PstNI	CAGNNNCTG	1 cut(s)	947
PsuI	RGATCY	1 cut(s)	1375
RsaI	GTAC	3 cut(s)	473, 1550, 2070
RsaNI	GTAC	3 cut(s)	472, 1549, 2069
RseI	CAYNNNNRTG	3 cut(s)	542, 1065, 1599
SacII	CCGCGG	1 cut(s)	45
SalI	GTCGAC	1 cut(s)	1286
SaqAI	TTAA	4 cut(s)	510, 1350, 1796, 1866
Sau3AI	GATC	6 cut(s)	1220, 1375, 1582, 1858, 1918, 2131
Sau96I	GGNCC	8 cut(s)	415, 736, 870, 938, 944, 1317, 1967, 1968
SchI	GAGTC	4 cut(s)	128, 499, 531, 2063
ScrFI	CCNGG	7 cut(s)	384, 448, 750, 942, 948, 1308, 2007
SduI	GDGCHC	1 cut(s)	1971
SfaNI	GCATC	6 cut(s)	282, 907, 967, 1057, 1186, 1639
SfcI	CTRYAG	3 cut(s)	1107, 1145, 1694
Sfr303I	CCGCGG	1 cut(s)	45
SgrBI	CCGCGG	1 cut(s)	45
SinI	GGWCC	4 cut(s)	415, 736, 938, 944
SmiMI	CAYNNNNRTG	3 cut(s)	542, 1065, 1599
SmlI	CTYRAG	1 cut(s)	509
SmoI	CTYRAG	1 cut(s)	509
Sse9I	AATT	8 cut(s)	993, 1176, 1189, 1437, 1494, 1574, 1719, 2063
SspMI	CTAG	7 cut(s)	53, 552, 1052, 1118, 1256, 1643, 2094
StyD4I	CCNGG	7 cut(s)	382, 446, 748, 940, 946, 1306, 2005
TaaI	ACNGT	4 cut(s)	718, 1292, 1399, 1932
TaiI	ACGT	7 cut(s)	198, 237, 291, 405, 456, 477, 531
TaqI	TCGA	1 cut(s)	1287
TasI	AATT	8 cut(s)	993, 1176, 1189, 1437, 1494, 1574, 1719, 2063
TatI	WGTACW	1 cut(s)	2068
TauI	GCSGC	5 cut(s)	47, 189, 227, 230, 694
TfiI	GAWTC	2 cut(s)	1311, 1460
Tru1I	TTAA	4 cut(s)	510, 1350, 1796, 1866
Tru9I	TTAA	4 cut(s)	510, 1350, 1796, 1866
TscAI	CASTG	6 cut(s)	837, 1119, 1297, 1614, 1692, 2029
TseFI	GTSAC	2 cut(s)	37, 454
TseI	GCWGC	8 cut(s)	407, 688, 1109, 1144, 1472, 1693, 1787, 2111
Tsp45I	GTSAC	2 cut(s)	37, 454
TspDTI	ATGAA	6 cut(s)	61, 115, 1356, 1583, 1721, 2091
TspGWI	ACGGA	2 cut(s)	644, 2004
TspRI	CASTG	6 cut(s)	837, 1119, 1297, 1614, 1692, 2029
Van91I	CCANNNNNTGG	3 cut(s)	947, 1100, 1620
Vha464I	CTTAAG	1 cut(s)	509
VpaK11BI	GGWCC	4 cut(s)	415, 736, 938, 944
VspI	ATTAAT	1 cut(s)	1796
XapI	RAATTY	3 cut(s)	1494, 1574, 2063
XceI	RCATGY	2 cut(s)	1604, 2111
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1412
XmiI	GTMKAC	4 cut(s)	626, 1287, 1401, 1536
XspI	CTAG	7 cut(s)	53, 552, 1052, 1118, 1256, 1643, 2094

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.