isoform X1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G22450 AT5G22450 AT5G22450 |
| fragaria_vesca | FvH4_3g24820 FvH4_3g24820 |
| malus_domestica | MD03G1143400.v1.1 MD11G1164200.v1.1 |
| prunus_persica | Prupe.6G129000_v2.0.a1 Prupe.6G129000_v2.0.a1 Prupe.6G129000_v2.0.a1 Prupe.6G129000_v2.0.a1 Prupe.6G129000_v2.0.a1 Prupe.6G129000_v2.0.a1 Prupe.6G129000_v2.0.a1 |
| pyrus_communis | pycom03g09860 pycom11g13560 |
| rosa_chinensis | RchiOBHm_Chr5g0044401 |
| rosa_laevigata | RLG00000034271 |
| rosa_multiflora | Rmu_sc0004741.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00036550 |
| rosa_rugosa | Rorug05G0213700 Rorug05G0213700 |
| rosa_samantha | Rh5AG298300 Rh5BG305600 Rh5CG332600 Rh5DG314800 |
| rosa_wichuraiana | Rw5G027600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1920 |
| AarI | CACCTGC | 1 cut(s) | 1645 |
| Acc16I | TGCGCA | 1 cut(s) | 1875 |
| Acc36I | ACCTGC | 3 cut(s) | 1645, 1672, 3407 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2728 |
| AccBSI | CCGCTC | 1 cut(s) | 2268 |
| AccI | GTMKAC | 3 cut(s) | 1836, 3221, 3303 |
| AccII | CGCG | 1 cut(s) | 326 |
| AciI | CCGC | 7 cut(s) | 326, 514, 1130, 2268, 2824, 2883, 2943 |
| AclWI | GGATC | 6 cut(s) | 285, 444, 818, 909, 2620, 2873 |
| AcoI | YGGCCR | 1 cut(s) | 1120 |
| AcsI | RAATTY | 9 cut(s) | 61, 337, 528, 775, 1138, 1561, 1753, 1867, 2225 |
| AcuI | CTGAAG | 4 cut(s) | 1035, 1683, 2592, 3383 |
| AcyI | GRCGYC | 1 cut(s) | 1630 |
| AdeI | CACNNNGTG | 1 cut(s) | 374 |
| AfaI | GTAC | 9 cut(s) | 34, 496, 912, 1953, 2056, 2076, 2118, 2185, 3025 |
| AflII | CTTAAG | 1 cut(s) | 230 |
| AflIII | ACRYGT | 1 cut(s) | 718 |
| AjnI | CCWGG | 5 cut(s) | 414, 866, 1246, 1528, 1960 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2349, 2381 |
| Alw21I | GWGCWC | 2 cut(s) | 493, 2588 |
| AlwI | GGATC | 6 cut(s) | 285, 444, 818, 909, 2620, 2873 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1358, 2396 |
| Ama87I | CYCGRG | 1 cut(s) | 797 |
| AoxI | GGCC | 4 cut(s) | 1120, 1259, 2997, 3264 |
| ApoI | RAATTY | 9 cut(s) | 61, 337, 528, 775, 1138, 1561, 1753, 1867, 2225 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1802, 1834 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1006 |
| AspLEI | GCGC | 3 cut(s) | 1876, 2809, 3068 |
| AspS9I | GGNCC | 6 cut(s) | 1259, 1810, 1988, 2719, 3248, 3264 |
| AsuC2I | CCSGG | 4 cut(s) | 372, 798, 799, 2471 |
| AsuHPI | GGTGA | 7 cut(s) | 386, 567, 653, 786, 814, 1409, 1724 |
| AsuII | TTCGAA | 1 cut(s) | 2850 |
| AsuNHI | GCTAGC | 1 cut(s) | 928 |
| AvaI | CYCGRG | 1 cut(s) | 797 |
| AvaII | GGWCC | 4 cut(s) | 1810, 1988, 2719, 3248 |
| AxyI | CCTNAGG | 1 cut(s) | 2550 |
| BalI | TGGCCA | 1 cut(s) | 1122 |
| BanII | GRGCYC | 3 cut(s) | 569, 1018, 3124 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 603, 635, 2100, 2132 |
| BbsI | GAAGAC | 1 cut(s) | 3389 |
| Bbv12I | GWGCWC | 2 cut(s) | 493, 2588 |
| BbvCI | CCTCAGC | 1 cut(s) | 2994 |
| BccI | CCATC | 8 cut(s) | 642, 1078, 1801, 1907, 2096, 2675, 3143, 3287 |
| BceAI | ACGGC | 3 cut(s) | 368, 2745, 3086 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1737, 1771 |
| BciT130I | CCWGG | 5 cut(s) | 416, 868, 1248, 1530, 1962 |
| BcnI | CCSGG | 4 cut(s) | 372, 798, 799, 2471 |
| BfmI | CTRYAG | 2 cut(s) | 36, 2528 |
| BfoI | RGCGCY | 1 cut(s) | 2810 |
| BfrI | CTTAAG | 1 cut(s) | 230 |
| BfuAI | ACCTGC | 3 cut(s) | 1645, 1672, 3407 |
| BglII | AGATCT | 2 cut(s) | 1197, 3373 |
| BlpI | GCTNAGC | 1 cut(s) | 918 |
| BmcAI | AGTACT | 2 cut(s) | 912, 2056 |
| Bme1390I | CCNGG | 9 cut(s) | 372, 416, 798, 799, 868, 1248, 1530, 1962, 2471 |
| Bme18I | GGWCC | 4 cut(s) | 1810, 1988, 2719, 3248 |
| BmeT110I | CYCGRG | 1 cut(s) | 797 |
| BmgT120I | GGNCC | 6 cut(s) | 1259, 1810, 1988, 2719, 3248, 3264 |
| BmiI | GGNNCC | 6 cut(s) | 87, 420, 1017, 1252, 3265, 3432 |
| BmrFI | CCNGG | 9 cut(s) | 372, 416, 798, 799, 868, 1248, 1530, 1962, 2471 |
| BmrI | ACTGGG | 3 cut(s) | 1266, 2479, 2868 |
| BmsI | GCATC | 6 cut(s) | 459, 511, 1250, 2716, 2911, 3053 |
| BmtI | GCTAGC | 1 cut(s) | 932 |
| BmuI | ACTGGG | 3 cut(s) | 1266, 2479, 2868 |
| BpiI | GAAGAC | 1 cut(s) | 3389 |
| BpmI | CTGGAG | 4 cut(s) | 612, 1380, 2669, 3309 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2994 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 918 |
| Bpu14I | TTCGAA | 1 cut(s) | 2850 |
| BpuEI | CTTGAG | 2 cut(s) | 54, 3108 |
| BpuMI | CCSGG | 4 cut(s) | 372, 798, 799, 2471 |
| BsaBI | GATNNNNATC | 4 cut(s) | 46, 787, 1725, 2376 |
| BsaHI | GRCGYC | 1 cut(s) | 1630 |
| BsaI | GGTCTC | 1 cut(s) | 1120 |
| BsaJI | CCNNGG | 9 cut(s) | 453, 797, 798, 933, 1246, 1960, 2761, 3000, 3274 |
| BsaWI | WCCGGW | 1 cut(s) | 1073 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 585, 615, 2097, 2127 |
| Bse1I | ACTGG | 9 cut(s) | 963, 1261, 1464, 1568, 2289, 2485, 2863, 2958, 3389 |
| Bse21I | CCTNAGG | 1 cut(s) | 2550 |
| Bse3DI | GCAATG | 4 cut(s) | 891, 1110, 2359, 2562 |
| Bse8I | GATNNNNATC | 4 cut(s) | 46, 787, 1725, 2376 |
| BseBI | CCWGG | 5 cut(s) | 416, 868, 1248, 1530, 1962 |
| BseDI | CCNNGG | 9 cut(s) | 453, 797, 798, 933, 1246, 1960, 2761, 3000, 3274 |
| BseJI | GATNNNNATC | 4 cut(s) | 46, 787, 1725, 2376 |
| BseMI | GCAATG | 4 cut(s) | 891, 1110, 2359, 2562 |
| BseMII | CTCAG | 8 cut(s) | 213, 909, 1215, 1281, 1365, 1617, 2541, 2985 |
| BseNI | ACTGG | 9 cut(s) | 963, 1261, 1464, 1568, 2289, 2485, 2863, 2958, 3389 |
| BseRI | GAGGAG | 6 cut(s) | 198, 239, 2311, 3046, 3129, 3291 |
| BseYI | CCCAGC | 3 cut(s) | 272, 2809, 2912 |
| BsgI | GTGCAG | 4 cut(s) | 1080, 2382, 3033, 3318 |
| Bsh1236I | CGCG | 1 cut(s) | 326 |
| Bsh1285I | CGRYCG | 1 cut(s) | 501 |
| BshFI | GGCC | 4 cut(s) | 1122, 1261, 2999, 3266 |
| BsiEI | CGRYCG | 1 cut(s) | 501 |
| BsiHKAI | GWGCWC | 2 cut(s) | 493, 2588 |
| BsiHKCI | CYCGRG | 1 cut(s) | 797 |
| BsiSI | CCGG | 4 cut(s) | 372, 798, 1074, 2471 |
| BsiWI | CGTACG | 1 cut(s) | 494 |
| BslFI | GGGAC | 1 cut(s) | 954 |
| BsmFI | GGGAC | 1 cut(s) | 954 |
| BsmI | GAATGC | 2 cut(s) | 1183, 1318 |
| BsnI | GGCC | 4 cut(s) | 1122, 1261, 2999, 3266 |
| Bso31I | GGTCTC | 1 cut(s) | 1120 |
| BsoBI | CYCGRG | 1 cut(s) | 797 |
| Bsp119I | TTCGAA | 1 cut(s) | 2850 |
| Bsp1286I | GDGCHC | 5 cut(s) | 493, 569, 1018, 2588, 3124 |
| Bsp1407I | TGTACA | 1 cut(s) | 2116 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 918 |
| BspACI | CCGC | 7 cut(s) | 326, 514, 1130, 2268, 2824, 2883, 2943 |
| BspANI | GGCC | 4 cut(s) | 1122, 1261, 2999, 3266 |
| BspCNI | CTCAG | 8 cut(s) | 214, 910, 1214, 1280, 1364, 1616, 2542, 2986 |
| BspFNI | CGCG | 1 cut(s) | 326 |
| BspLI | GGNNCC | 6 cut(s) | 87, 420, 1017, 1252, 3265, 3432 |
| BspMI | ACCTGC | 3 cut(s) | 1645, 1672, 3407 |
| BspOI | GCTAGC | 1 cut(s) | 932 |
| BspPI | GGATC | 6 cut(s) | 285, 444, 818, 909, 2620, 2873 |
| BspT104I | TTCGAA | 1 cut(s) | 2850 |
| BspTI | CTTAAG | 1 cut(s) | 230 |
| BspTNI | GGTCTC | 1 cut(s) | 1120 |
| BsrBI | CCGCTC | 1 cut(s) | 2268 |
| BsrDI | GCAATG | 4 cut(s) | 891, 1110, 2359, 2562 |
| BsrGI | TGTACA | 1 cut(s) | 2116 |
| BsrI | ACTGG | 9 cut(s) | 963, 1261, 1464, 1568, 2289, 2485, 2863, 2958, 3389 |
| BssECI | CCNNGG | 9 cut(s) | 453, 797, 798, 933, 1246, 1960, 2761, 3000, 3274 |
| BssNI | GRCGYC | 1 cut(s) | 1630 |
| BssT1I | CCWWGG | 2 cut(s) | 933, 3000 |
| Bst2UI | CCWGG | 5 cut(s) | 416, 868, 1248, 1530, 1962 |
| Bst4CI | ACNGT | 7 cut(s) | 502, 675, 845, 886, 2174, 2361, 2830 |
| Bst6I | CTCTTC | 2 cut(s) | 606, 2151 |
| BstACI | GRCGYC | 1 cut(s) | 1630 |
| BstAFI | CTTAAG | 1 cut(s) | 230 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1778 |
| BstAUI | TGTACA | 1 cut(s) | 2116 |
| BstBI | TTCGAA | 1 cut(s) | 2850 |
| BstC8I | GCNNGC | 7 cut(s) | 489, 930, 1383, 1677, 2442, 2758, 3256 |
| BstDSI | CCRYGG | 1 cut(s) | 2761 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1419 |
| BstFNI | CGCG | 1 cut(s) | 326 |
| BstH2I | RGCGCY | 1 cut(s) | 2810 |
| BstHHI | GCGC | 3 cut(s) | 1876, 2809, 3068 |
| BstMCI | CGRYCG | 1 cut(s) | 501 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 733, 1685, 1757, 1766, 1778, 2653 |
| BstNI | CCWGG | 5 cut(s) | 416, 868, 1248, 1530, 1962 |
| BstNSI | RCATGY | 4 cut(s) | 1103, 1846, 2335, 2760 |
| BstSCI | CCNGG | 9 cut(s) | 370, 414, 796, 797, 866, 1246, 1528, 1960, 2469 |
| BstSFI | CTRYAG | 2 cut(s) | 36, 2528 |
| BstUI | CGCG | 1 cut(s) | 326 |
| BstV2I | GAAGAC | 1 cut(s) | 3389 |
| BstX2I | RGATCY | 5 cut(s) | 277, 449, 1197, 2625, 3373 |
| BstYI | RGATCY | 5 cut(s) | 277, 449, 1197, 2625, 3373 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2550 |
| BsuRI | GGCC | 4 cut(s) | 1122, 1261, 2999, 3266 |
| BtgI | CCRYGG | 1 cut(s) | 2761 |
| BtgZI | GCGATG | 2 cut(s) | 1305, 1940 |
| BtsI | GCAGTG | 2 cut(s) | 3021, 3103 |
| BtsIMutI | CAGTG | 8 cut(s) | 606, 1254, 2170, 2296, 2366, 2586, 3021, 3103 |
| BveI | ACCTGC | 3 cut(s) | 1645, 1672, 3407 |
| Cac8I | GCNNGC | 7 cut(s) | 489, 930, 1383, 1677, 2442, 2758, 3256 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1358, 2396 |
| CfoI | GCGC | 3 cut(s) | 1876, 2809, 3068 |
| Cfr13I | GGNCC | 6 cut(s) | 1259, 1810, 1988, 2719, 3248, 3264 |
| Cfr9I | CCCGGG | 1 cut(s) | 797 |
| CseI | GACGC | 4 cut(s) | 395, 1619, 1910, 2402 |
| CsiI | ACCWGGT | 1 cut(s) | 414 |
| Csp6I | GTAC | 9 cut(s) | 33, 495, 911, 1952, 2055, 2075, 2117, 2184, 3024 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2784, 2819 |
| CviQI | GTAC | 9 cut(s) | 33, 495, 911, 1952, 2055, 2075, 2117, 2184, 3024 |
| DraI | TTTAAA | 2 cut(s) | 241, 1290 |
| DraIII | CACNNNGTG | 1 cut(s) | 374 |
| EaeI | YGGCCR | 1 cut(s) | 1120 |
| Eam1104I | CTCTTC | 2 cut(s) | 606, 2151 |
| EarI | CTCTTC | 2 cut(s) | 606, 2151 |
| EciI | GGCGGA | 1 cut(s) | 2839 |
| Eco130I | CCWWGG | 2 cut(s) | 933, 3000 |
| Eco24I | GRGCYC | 3 cut(s) | 569, 1018, 3124 |
| Eco31I | GGTCTC | 1 cut(s) | 1120 |
| Eco32I | GATATC | 1 cut(s) | 2896 |
| Eco47I | GGWCC | 4 cut(s) | 1810, 1988, 2719, 3248 |
| Eco57I | CTGAAG | 4 cut(s) | 1035, 1683, 2592, 3383 |
| Eco81I | CCTNAGG | 1 cut(s) | 2550 |
| Eco88I | CYCGRG | 1 cut(s) | 797 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1419 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3264 |
| EcoRI | GAATTC | 1 cut(s) | 1138 |
| EcoRII | CCWGG | 5 cut(s) | 414, 866, 1246, 1528, 1960 |
| EcoRV | GATATC | 1 cut(s) | 2896 |
| EcoT14I | CCWWGG | 2 cut(s) | 933, 3000 |
| EcoT38I | GRGCYC | 3 cut(s) | 569, 1018, 3124 |
| ErhI | CCWWGG | 2 cut(s) | 933, 3000 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 938, 970 |
| FaqI | GGGAC | 1 cut(s) | 954 |
| FauI | CCCGC | 2 cut(s) | 507, 2890 |
| FauNDI | CATATG | 1 cut(s) | 1327 |
| FblI | GTMKAC | 3 cut(s) | 1836, 3221, 3303 |
| FriOI | GRGCYC | 3 cut(s) | 569, 1018, 3124 |
| FspI | TGCGCA | 1 cut(s) | 1875 |
| GlaI | GCGC | 3 cut(s) | 1875, 2808, 3067 |
| GsaI | CCCAGC | 3 cut(s) | 276, 2813, 2916 |
| GsuI | CTGGAG | 4 cut(s) | 612, 1380, 2669, 3309 |
| HaeII | RGCGCY | 1 cut(s) | 2810 |
| HaeIII | GGCC | 4 cut(s) | 1122, 1261, 2999, 3266 |
| HapII | CCGG | 4 cut(s) | 372, 798, 1074, 2471 |
| HgaI | GACGC | 4 cut(s) | 395, 1619, 1910, 2402 |
| HhaI | GCGC | 3 cut(s) | 1876, 2809, 3068 |
| Hin1I | GRCGYC | 1 cut(s) | 1630 |
| Hin6I | GCGC | 3 cut(s) | 1874, 2807, 3066 |
| HinP1I | GCGC | 3 cut(s) | 1874, 2807, 3066 |
| HincII | GTYRAC | 5 cut(s) | 1521, 1978, 2785, 3222, 3304 |
| HindII | GTYRAC | 5 cut(s) | 1521, 1978, 2785, 3222, 3304 |
| HindIII | AAGCTT | 1 cut(s) | 2654 |
| HpaII | CCGG | 4 cut(s) | 372, 798, 1074, 2471 |
| HphI | GGTGA | 7 cut(s) | 386, 567, 653, 786, 814, 1409, 1724 |
| Hpy99I | CGWCG | 5 cut(s) | 354, 506, 1519, 3308, 3311 |
| HpyAV | CCTTC | 9 cut(s) | 129, 213, 638, 1707, 1759, 2599, 2603, 2668, 2988 |
| HpyCH4III | ACNGT | 7 cut(s) | 502, 675, 845, 886, 2174, 2361, 2830 |
| HpyCH4IV | ACGT | 2 cut(s) | 552, 718 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 733, 1685, 1757, 1766, 1778, 2653 |
| HpySE526I | ACGT | 2 cut(s) | 552, 718 |
| Hsp92I | GRCGYC | 1 cut(s) | 1630 |
| HspAI | GCGC | 3 cut(s) | 1874, 2807, 3066 |
| LmnI | GCTCC | 4 cut(s) | 226, 1021, 1355, 3319 |
| LweI | GCATC | 6 cut(s) | 459, 511, 1250, 2716, 2911, 3053 |
| MabI | ACCWGGT | 1 cut(s) | 414 |
| MaeII | ACGT | 2 cut(s) | 552, 718 |
| MaeIII | GTNAC | 8 cut(s) | 14, 764, 1397, 2159, 2791, 2960, 3079, 3280 |
| MbiI | CCGCTC | 1 cut(s) | 2268 |
| MfeI | CAATTG | 1 cut(s) | 2435 |
| MflI | RGATCY | 5 cut(s) | 277, 449, 1197, 2625, 3373 |
| MhlI | GDGCHC | 5 cut(s) | 493, 569, 1018, 2588, 3124 |
| MlsI | TGGCCA | 1 cut(s) | 1122 |
| MluNI | TGGCCA | 1 cut(s) | 1122 |
| MlyI | GAGTC | 4 cut(s) | 740, 761, 1343, 2246 |
| MmeI | TCCRAC | 4 cut(s) | 294, 858, 1463, 2015 |
| Mox20I | TGGCCA | 1 cut(s) | 1122 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1006 |
| MscI | TGGCCA | 1 cut(s) | 1122 |
| MslI | CAYNNNNRTG | 2 cut(s) | 2352, 2540 |
| Msp20I | TGGCCA | 1 cut(s) | 1122 |
| MspA1I | CMGCKG | 2 cut(s) | 743, 1864 |
| MspCI | CTTAAG | 1 cut(s) | 230 |
| MspI | CCGG | 4 cut(s) | 372, 798, 1074, 2471 |
| MspR9I | CCNGG | 9 cut(s) | 372, 416, 798, 799, 868, 1248, 1530, 1962, 2471 |
| MunI | CAATTG | 1 cut(s) | 2435 |
| Mva1269I | GAATGC | 2 cut(s) | 1183, 1318 |
| MvaI | CCWGG | 5 cut(s) | 416, 868, 1248, 1530, 1962 |
| MvnI | CGCG | 1 cut(s) | 326 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 733, 1685, 1757, 1766, 1778, 2653 |
| NciI | CCSGG | 4 cut(s) | 372, 798, 799, 2471 |
| NdeI | CATATG | 1 cut(s) | 1327 |
| NheI | GCTAGC | 1 cut(s) | 928 |
| NlaIV | GGNNCC | 6 cut(s) | 87, 420, 1017, 1252, 3265, 3432 |
| NmeAIII | GCCGAG | 1 cut(s) | 1651 |
| NmuCI | GTSAC | 4 cut(s) | 764, 1397, 2159, 3079 |
| NsbI | TGCGCA | 1 cut(s) | 1875 |
| NspI | RCATGY | 4 cut(s) | 1103, 1846, 2335, 2760 |
| NspV | TTCGAA | 1 cut(s) | 2850 |
| PaeI | GCATGC | 1 cut(s) | 2760 |
| PaqCI | CACCTGC | 1 cut(s) | 1645 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 2160, 3335 |
| PctI | GAATGC | 2 cut(s) | 1183, 1318 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1006 |
| Pfl23II | CGTACG | 1 cut(s) | 494 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2728 |
| PfoI | TCCNGGA | 1 cut(s) | 866 |
| PleI | GAGTC | 4 cut(s) | 740, 761, 1343, 2245 |
| PpsI | GAGTC | 4 cut(s) | 740, 761, 1343, 2245 |
| PsiI | TTATAA | 1 cut(s) | 1920 |
| Psp6I | CCWGG | 5 cut(s) | 414, 866, 1246, 1528, 1960 |
| PspFI | CCCAGC | 3 cut(s) | 272, 2809, 2912 |
| PspGI | CCWGG | 5 cut(s) | 414, 866, 1246, 1528, 1960 |
| PspLI | CGTACG | 1 cut(s) | 494 |
| PspN4I | GGNNCC | 6 cut(s) | 87, 420, 1017, 1252, 3265, 3432 |
| PspPI | GGNCC | 6 cut(s) | 1259, 1810, 1988, 2719, 3248, 3264 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1358, 2396 |
| PsuI | RGATCY | 5 cut(s) | 277, 449, 1197, 2625, 3373 |
| PvuII | CAGCTG | 2 cut(s) | 743, 1864 |
| RsaI | GTAC | 9 cut(s) | 34, 496, 912, 1953, 2056, 2076, 2118, 2185, 3025 |
| RsaNI | GTAC | 9 cut(s) | 33, 495, 911, 1952, 2055, 2075, 2117, 2184, 3024 |
| RseI | CAYNNNNRTG | 2 cut(s) | 2352, 2540 |
| SalI | GTCGAC | 2 cut(s) | 3220, 3302 |
| Sau96I | GGNCC | 6 cut(s) | 1259, 1810, 1988, 2719, 3248, 3264 |
| ScaI | AGTACT | 2 cut(s) | 912, 2056 |
| SchI | GAGTC | 4 cut(s) | 740, 761, 1343, 2246 |
| ScrFI | CCNGG | 9 cut(s) | 372, 416, 798, 799, 868, 1248, 1530, 1962, 2471 |
| SduI | GDGCHC | 5 cut(s) | 493, 569, 1018, 2588, 3124 |
| SexAI | ACCWGGT | 1 cut(s) | 414 |
| SfaNI | GCATC | 6 cut(s) | 459, 511, 1250, 2716, 2911, 3053 |
| SfcI | CTRYAG | 2 cut(s) | 36, 2528 |
| SfuI | TTCGAA | 1 cut(s) | 2850 |
| SinI | GGWCC | 4 cut(s) | 1810, 1988, 2719, 3248 |
| SmaI | CCCGGG | 1 cut(s) | 799 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 2352, 2540 |
| SmlI | CTYRAG | 3 cut(s) | 69, 230, 3123 |
| SmoI | CTYRAG | 3 cut(s) | 69, 230, 3123 |
| SphI | GCATGC | 1 cut(s) | 2760 |
| SsiI | CCGC | 7 cut(s) | 326, 514, 1130, 2268, 2824, 2883, 2943 |
| SspI | AATATT | 1 cut(s) | 993 |
| StyD4I | CCNGG | 9 cut(s) | 370, 414, 796, 797, 866, 1246, 1528, 1960, 2469 |
| StyI | CCWWGG | 2 cut(s) | 933, 3000 |
| TaaI | ACNGT | 7 cut(s) | 502, 675, 845, 886, 2174, 2361, 2830 |
| TaiI | ACGT | 2 cut(s) | 555, 721 |
| TaqI | TCGA | 9 cut(s) | 785, 1144, 1884, 2022, 2850, 3221, 3303, 3329, 3390 |
| TaqII | GACCGA | 1 cut(s) | 894 |
| TatI | WGTACW | 5 cut(s) | 910, 1951, 2054, 2116, 3023 |
| TauI | GCSGC | 1 cut(s) | 2946 |
| TscAI | CASTG | 8 cut(s) | 606, 1261, 2177, 2296, 2366, 2593, 3021, 3103 |
| TseFI | GTSAC | 4 cut(s) | 764, 1397, 2159, 3079 |
| Tsp45I | GTSAC | 4 cut(s) | 764, 1397, 2159, 3079 |
| TspGWI | ACGGA | 3 cut(s) | 1777, 3219, 3332 |
| TspMI | CCCGGG | 1 cut(s) | 797 |
| TspRI | CASTG | 8 cut(s) | 606, 1261, 2177, 2296, 2366, 2593, 3021, 3103 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2728 |
| Vha464I | CTTAAG | 1 cut(s) | 230 |
| VpaK11BI | GGWCC | 4 cut(s) | 1810, 1988, 2719, 3248 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1419 |
| XapI | RAATTY | 9 cut(s) | 61, 337, 528, 775, 1138, 1561, 1753, 1867, 2225 |
| XbaI | TCTAGA | 1 cut(s) | 3349 |
| XceI | RCATGY | 4 cut(s) | 1103, 1846, 2335, 2760 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 874 |
| XmaI | CCCGGG | 1 cut(s) | 797 |
| XmiI | GTMKAC | 3 cut(s) | 1836, 3221, 3303 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1006 |
| ZrmI | AGTACT | 2 cut(s) | 912, 2056 |