AT5G38880

HAUS augmin-like complex subunit 5

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0010982
Physical Location & Seq
Reverse (-)
15562939 .. 15569250
6312 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G38880.1

Sequence Viewer

Length: 2391 bp
ATGCAGAGTTTATCGAGCTCGGCTCCGACACCGGAGGCGATATTAGAATGGTTACAGAAGGAAATGGGGTACAGGCAATTAGGTCCGTATAATGGATCGAGCAAATCTCATGTTCCTTCTATTGATGCTATAAGGAAGATTTGTAGAGGGAATATGATACCTATATGGAATTTTTTGATAAACCGAGTGAAATCGGAGAAGACAGTGGAGAGAATTAGGCGGAATATTACGGTTCATGGGGGAAGTAGTAATGCTAGCATTGGGAGTTCGGTAAATCCTGGGAAGGAGGAGAGTAAGAGTAAAGGAAGGCGGAAGGATAAGACAGTGACTGGTGAGAGTTCGAGTTATGCGGAGGATAGAGAAGCTGCATTGCAGGAAAGGGAATTAGCTGCAAAGGAAGTGGAGAGATTGAGGAACATAGTGAGGAGGCAAAGAAAAGATTTGAAAGCTAGAATGTTGGAGGTCTCTAGAGAAGAAGCAGAGCGGAAGAGGATGCTTGATGAAAGAGCAAATTACAGACACAAGCAAGCATTGTTGGAAGCGTATGATCAACAATGTGATGAAGCAACAAGAATATTTGCAGAGTATCACAAAAGGCTACAAGTCTATGTTAATCAAGCAAATGATGCACAACGGTCTGTCAATTCATCGAATGAAGTGTTAAGCAGCCTCAGTGCTAACAGTGAGAGGGAAGCTGTTTATTCCACTGTCAAAGGAACTAAGTCTGCAGATGATGTCATTCTCATGGAAACAACCCGAGAACGAAATATCAGGATAGTATGTGATTTGCTTGCATCACGCATGATTGAAAGAATACGTAACTCCTTCCCTGCATACGAAGGAAATGGAATTTGTTCACTTCCAGAGCTGGAAACTGCCAAGCTGGGTTTTGAGTATGATGGAGAAATAACTGATGAGATGAAAACTGTTATAGTAAATTCCCTGAGGGGTCCTCCTCTGCTGCTTCAGGCTATTGCTGCATACACTTTACGCATTAAGACTCTGATATCCAGAGAGATGGAGAAGATTGATGTCAGAGCAGATGCTGAAATGTTAAGGTATAAGTTTGAGAACAACCGTGTAACAGACAATTCTTCTTCTGATGTGAGCTCCCCTTTGAGTTATCAGTTTAATGGAAACGGGAAGATAGGCACAGATACTCATTTCCAAGGATCTAACAACCAGCTCCTTGAACGGCAGAAAGCCCATGTTCAACAATTTTTGGCTACTGAAGATGCACTAAACAAAGCAGCTGAAGCTCGTGATTTATGCCACAAGTTTATTAACCGTTTGCATGGAAGTGCTGATACAGCTACTCATTCGTTTGTTGGAGGCACAACACAGAGTGGTAGCAATCTTAGGCAATTTGAGTTGGATGTATGGGGAAAGGAAAGAGAAGCTGCTGGTTTGAGGGCTAGCTTAAACACATTGTTATCTGAAATACAACGGCTGAATAAATTATGTGCAGAAAGAAAAGAAGCCGAAGATTCCTTGAAAAAGAAGTGGAAGAAAATTGAGGAATTTGATGCTCGCAGATCCGAACTTGAAACCATATATACAACTCTTCTCAAGGCCAACATGGATGCTGTTGCATTCTGGAATCAACAACCACTAGCTGCAAGGGAATATGCATCAGCCACTGTAATTCCAGCCAGTGAAGTTGTTGTGGACATTTCAAACAGCGCAAAAGATTTCATTGAGAAAGAAGTGTCTGCTTTCTTTCAAAGTCCTGATAACAGTCTTTATATGCTTCCAGCAACTCCCCAGGGACTTCTGGAATCTATGGGAGCTAATGGATCGACGGGACCTGAAGCTGTTGCATATGCAGAGAAGAATGCTGCTCTATTAACGGCTAGAGCTGGTGCAAGAGATCCATCGGCAATACCATCTATATGTCGCATTTCTGCTGCCCTTCAATATCCTGCAGGTCTTGAGGGTTCAGATGCAAGTTTGGCCTCAGTGTTAGAGTCTCTTGAGTTCTGCTTAAGAGTTCGTGGTTCTGAAGCATGTGTTTTAGAAGACTTAGCAAAGGCAATCGATTTGGTCCATATTCGGCAGGATCTAGTTGAAAGTGGCCATTCTCTGTTAGATCATGCTTTCCGTGCCCAGCAAAAATATGAAAGAACAACTAACTACTGCCTAGATCTAGCTTCTGAACAAGAGAATACAATATCGGACCAGTGGTTACCTGAACTTAGGACTGCAGTTCAGAATGCGCAAGCTTCCTCGGAACACTGCAAATACGTTAGGGGTTTGCTTGATGAATGGTGGGAACAACCTGCATCAACAGTTGTGGATTGGGTCACTGTAGATGGTCAAAGTGTTGCAGCTTGGCAAAACCATGTCAAACAGCTTCTTGCCTTCTATGATAAAGAATCATTGCGAACGTAA

Protein Analysis

796

Amino Acids

89.18

Weight (kDa)

6.01

Isoelectric Point (pI)

43.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HAUS5 PF14817 11 - 780 2.1e-249 HAUS augmin-like complex subunit 5
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 2217
Acc36I ACCTGC 2 cut(s) 1916, 2287
AccBSI CCGCTC 1 cut(s) 484
AciI CCGC 4 cut(s) 220, 310, 350, 484
AclWI GGATC 6 cut(s) 103, 1180, 1530, 1804, 1865, 2067
AcoI YGGCCR 1 cut(s) 2074
AcsI RAATTY 4 cut(s) 169, 849, 937, 1520
AcuI CTGAAG 5 cut(s) 950, 1251, 1275, 1830, 2022
AdeI CACNNNGTG 1 cut(s) 1346
AfaI GTAC 1 cut(s) 71
AfiI CCNNNNNNNGG 1 cut(s) 92
AflII CTTAAG 1 cut(s) 1984
AjnI CCWGG 2 cut(s) 277, 1764
Alw21I GWGCWC 2 cut(s) 20, 1112
Alw26I GTCTC 2 cut(s) 469, 1974
AlwI GGATC 6 cut(s) 103, 1180, 1530, 1804, 1865, 2067
AlwNI CAGNNNCTG 3 cut(s) 329, 1046, 1640
Ama87I CYCGRG 1 cut(s) 756
AoxI GGCC 3 cut(s) 1572, 1953, 2074
ApoI RAATTY 4 cut(s) 169, 849, 937, 1520
Asp700I GAANNNNTTC 1 cut(s) 853
AspLEI GCGC 2 cut(s) 1685, 2218
AspS9I GGNCC 5 cut(s) 83, 950, 1805, 2044, 2176
AsuHPI GGTGA 1 cut(s) 344
AsuNHI GCTAGC 2 cut(s) 254, 1415
AvaI CYCGRG 1 cut(s) 756
AvaII GGWCC 5 cut(s) 83, 950, 1805, 2044, 2176
AxyI CCTNAGG 1 cut(s) 944
BaeGI GKGCMC 1 cut(s) 2107
BalI TGGCCA 1 cut(s) 2076
BanII GRGCYC 2 cut(s) 20, 1112
BarI GAAGNNNNNNTAC 2 cut(s) 1291, 1323
BauI CACGAG 1 cut(s) 1260
BbsI GAAGAC 2 cut(s) 206, 2025
Bbv12I GWGCWC 2 cut(s) 20, 1112
BccI CCATC 5 cut(s) 893, 1012, 1882, 1894, 2306
BceAI ACGGC 3 cut(s) 1211, 1463, 1866
BciT130I CCWGG 2 cut(s) 279, 1766
BclI TGATCA 1 cut(s) 547
BcoDI GTCTC 2 cut(s) 469, 1974
BfaI CTAG 9 cut(s) 255, 450, 468, 1416, 1613, 1854, 2063, 2141, 2147
BfmI CTRYAG 4 cut(s) 726, 1923, 2202, 2307
BfrI CTTAAG 1 cut(s) 1984
BfuAI ACCTGC 2 cut(s) 1916, 2287
BglII AGATCT 1 cut(s) 2143
Bme1390I CCNGG 2 cut(s) 279, 1766
Bme18I GGWCC 5 cut(s) 83, 950, 1805, 2044, 2176
BmeT110I CYCGRG 1 cut(s) 756
BmgT120I GGNCC 5 cut(s) 83, 950, 1805, 2044, 2176
BmiI GGNNCC 3 cut(s) 24, 951, 1806
BmrFI CCNGG 2 cut(s) 279, 1766
BmtI GCTAGC 2 cut(s) 258, 1419
BpiI GAAGAC 2 cut(s) 206, 2025
BplI GAGNNNNNCTC 6 cut(s) 7, 39, 91, 123, 937, 969
BpuEI CTTGAG 3 cut(s) 1553, 1952, 1994
Bsa29I ATCGAT 1 cut(s) 2037
BsaAI YACGTR 1 cut(s) 818
BsaI GGTCTC 1 cut(s) 469
BsaJI CCNNGG 5 cut(s) 278, 1168, 1764, 1765, 2226
BsaWI WCCGGW 1 cut(s) 31
Bsc4I CCNNNNNNNGG 1 cut(s) 92
Bse1I ACTGG 3 cut(s) 334, 1653, 2179
Bse21I CCTNAGG 1 cut(s) 944
Bse3DI GCAATG 2 cut(s) 368, 2378
BseBI CCWGG 2 cut(s) 279, 1766
BseCI ATCGAT 1 cut(s) 2037
BseDI CCNNGG 5 cut(s) 278, 1168, 1764, 1765, 2226
BseGI GGATG 3 cut(s) 498, 1381, 1588
BseLI CCNNNNNNNGG 1 cut(s) 92
BseMI GCAATG 2 cut(s) 368, 2378
BseMII CTCAG 3 cut(s) 685, 935, 1971
BseNI ACTGG 3 cut(s) 334, 1653, 2179
BseRI GAGGAG 3 cut(s) 302, 439, 945
BseSI GKGCMC 1 cut(s) 2107
BseYI CCCAGC 2 cut(s) 883, 2106
BsgI GTGCAG 1 cut(s) 1485
BshFI GGCC 3 cut(s) 1574, 1955, 2076
BshVI ATCGAT 1 cut(s) 2037
BsiHKAI GWGCWC 2 cut(s) 20, 1112
BsiHKCI CYCGRG 1 cut(s) 756
BsiSI CCGG 1 cut(s) 32
BslFI GGGAC 2 cut(s) 1782, 1818
BslI CCNNNNNNNGG 1 cut(s) 92
BsmAI GTCTC 2 cut(s) 469, 1974
BsmFI GGGAC 2 cut(s) 1782, 1818
BsmI GAATGC 3 cut(s) 1592, 1840, 2218
BsnI GGCC 3 cut(s) 1574, 1955, 2076
Bso31I GGTCTC 1 cut(s) 469
BsoBI CYCGRG 1 cut(s) 756
Bsp1286I GDGCHC 3 cut(s) 20, 1112, 2107
Bsp143I GATC 9 cut(s) 95, 547, 1172, 1535, 1796, 1870, 2059, 2089, 2143
BspACI CCGC 4 cut(s) 220, 310, 350, 484
BspANI GGCC 3 cut(s) 1574, 1955, 2076
BspCNI CTCAG 3 cut(s) 684, 936, 1970
BspDI ATCGAT 1 cut(s) 2037
BspLI GGNNCC 3 cut(s) 24, 951, 1806
BspMAI CTGCAG 3 cut(s) 730, 1927, 2206
BspMI ACCTGC 2 cut(s) 1916, 2287
BspOI GCTAGC 2 cut(s) 258, 1419
BspPI GGATC 6 cut(s) 103, 1180, 1530, 1804, 1865, 2067
BspTI CTTAAG 1 cut(s) 1984
BspTNI GGTCTC 1 cut(s) 469
BsrBI CCGCTC 1 cut(s) 484
BsrDI GCAATG 2 cut(s) 368, 2378
BsrI ACTGG 3 cut(s) 334, 1653, 2179
BssECI CCNNGG 5 cut(s) 278, 1168, 1764, 1765, 2226
BssMI GATC 9 cut(s) 95, 547, 1172, 1535, 1796, 1870, 2059, 2089, 2143
BssSI CACGAG 1 cut(s) 1260
BssT1I CCWWGG 1 cut(s) 1168
Bst2BI CACGAG 1 cut(s) 1260
Bst2UI CCWGG 2 cut(s) 279, 1766
Bst6I CTCTTC 2 cut(s) 482, 1569
BstAFI CTTAAG 1 cut(s) 1984
BstAPI GCANNNNNTGC 1 cut(s) 626
BstBAI YACGTR 1 cut(s) 818
BstC8I GCNNGC 6 cut(s) 256, 528, 792, 1417, 1531, 2220
BstDEI CTNAG 7 cut(s) 671, 720, 944, 1358, 1957, 2023, 2195
BstEII GGTNACC 1 cut(s) 2184
BstF5I GGATG 3 cut(s) 498, 1381, 1588
BstHHI GCGC 2 cut(s) 1685, 2218
BstKTI GATC 9 cut(s) 98, 550, 1175, 1538, 1799, 1873, 2062, 2092, 2146
BstMAI GTCTC 2 cut(s) 469, 1974
BstMBI GATC 9 cut(s) 95, 547, 1172, 1535, 1796, 1870, 2059, 2089, 2143
BstMWI GCNNNNNNNGC 6 cut(s) 626, 977, 1256, 1310, 1952, 2102
BstNI CCWGG 2 cut(s) 279, 1766
BstNSI RCATGY 1 cut(s) 2010
BstPI GGTNACC 1 cut(s) 2184
BstSCI CCNGG 2 cut(s) 277, 1764
BstSFI CTRYAG 4 cut(s) 726, 1923, 2202, 2307
BstSLI GKGCMC 1 cut(s) 2107
BstSNI TACGTA 1 cut(s) 818
BstV2I GAAGAC 2 cut(s) 206, 2025
BstX2I RGATCY 5 cut(s) 1172, 1535, 1870, 2059, 2143
BstXI CCANNNNNNTGG 1 cut(s) 1018
BstYI RGATCY 5 cut(s) 1172, 1535, 1870, 2059, 2143
Bsu15I ATCGAT 1 cut(s) 2037
Bsu36I CCTNAGG 1 cut(s) 944
BsuRI GGCC 3 cut(s) 1574, 1955, 2076
BsuTUI ATCGAT 1 cut(s) 2037
BtsCI GGATG 3 cut(s) 498, 1381, 1588
BtsI GCAGTG 1 cut(s) 2233
BveI ACCTGC 2 cut(s) 1916, 2287
Cac8I GCNNGC 6 cut(s) 256, 528, 792, 1417, 1531, 2220
CaiI CAGNNNCTG 3 cut(s) 329, 1046, 1640
CfoI GCGC 2 cut(s) 1685, 2218
Cfr13I GGNCC 5 cut(s) 83, 950, 1805, 2044, 2176
ClaI ATCGAT 1 cut(s) 2037
Csp6I GTAC 1 cut(s) 70
CspCI CAANNNNNGTGG 4 cut(s) 381, 416, 2274, 2309
CviQI GTAC 1 cut(s) 70
DdeI CTNAG 7 cut(s) 671, 720, 944, 1358, 1957, 2023, 2195
DpnI GATC 9 cut(s) 97, 549, 1174, 1537, 1798, 1872, 2061, 2091, 2145
DpnII GATC 9 cut(s) 95, 547, 1172, 1535, 1796, 1870, 2059, 2089, 2143
DraIII CACNNNGTG 1 cut(s) 1346
EaeI YGGCCR 1 cut(s) 2074
Eam1104I CTCTTC 2 cut(s) 482, 1569
EarI CTCTTC 2 cut(s) 482, 1569
EciI GGCGGA 2 cut(s) 235, 325
Ecl136II GAGCTC 2 cut(s) 18, 1110
Eco105I TACGTA 1 cut(s) 818
Eco130I CCWWGG 1 cut(s) 1168
Eco24I GRGCYC 2 cut(s) 20, 1112
Eco31I GGTCTC 1 cut(s) 469
Eco32I GATATC 1 cut(s) 1008
Eco47I GGWCC 5 cut(s) 83, 950, 1805, 2044, 2176
Eco53kI GAGCTC 2 cut(s) 18, 1110
Eco57I CTGAAG 5 cut(s) 950, 1251, 1275, 1830, 2022
Eco81I CCTNAGG 1 cut(s) 944
Eco88I CYCGRG 1 cut(s) 756
Eco91I GGTNACC 1 cut(s) 2184
EcoICRI GAGCTC 2 cut(s) 18, 1110
EcoO109I RGGNCCY 2 cut(s) 950, 1805
EcoO65I GGTNACC 1 cut(s) 2184
EcoRII CCWGG 2 cut(s) 277, 1764
EcoRV GATATC 1 cut(s) 1008
EcoT14I CCWWGG 1 cut(s) 1168
EcoT22I ATGCAT 1 cut(s) 1633
EcoT38I GRGCYC 2 cut(s) 20, 1112
ErhI CCWWGG 1 cut(s) 1168
FaqI GGGAC 2 cut(s) 1782, 1818
FauNDI CATATG 1 cut(s) 1822
FbaI TGATCA 1 cut(s) 547
FokI GGATG 3 cut(s) 505, 1388, 1595
FriOI GRGCYC 2 cut(s) 20, 1112
FspBI CTAG 9 cut(s) 255, 450, 468, 1416, 1613, 1854, 2063, 2141, 2147
FspI TGCGCA 1 cut(s) 2217
GlaI GCGC 2 cut(s) 1684, 2217
GsaI CCCAGC 2 cut(s) 887, 2110
HaeIII GGCC 3 cut(s) 1574, 1955, 2076
HapII CCGG 1 cut(s) 32
HhaI GCGC 2 cut(s) 1685, 2218
Hin6I GCGC 2 cut(s) 1683, 2216
HinP1I GCGC 2 cut(s) 1683, 2216
HindIII AAGCTT 1 cut(s) 2220
HinfI GANTC 6 cut(s) 1000, 1487, 1600, 1778, 1967, 2375
HpaII CCGG 1 cut(s) 32
HphI GGTGA 1 cut(s) 344
Hpy166II GTNNAC 2 cut(s) 857, 1669
Hpy8I GTNNAC 2 cut(s) 857, 1669
Hpy99I CGWCG 1 cut(s) 1804
HpyAV CCTTC 9 cut(s) 52, 126, 277, 300, 307, 833, 835, 1922, 2371
HpyCH4IV ACGT 3 cut(s) 817, 2244, 2387
HpyF10VI GCNNNNNNNGC 6 cut(s) 626, 977, 1256, 1310, 1952, 2102
HpyF3I CTNAG 7 cut(s) 671, 720, 944, 1358, 1957, 2023, 2195
HpySE526I ACGT 3 cut(s) 817, 2244, 2387
HspAI GCGC 2 cut(s) 1683, 2216
Ksp22I TGATCA 1 cut(s) 547
Kzo9I GATC 9 cut(s) 95, 547, 1172, 1535, 1796, 1870, 2059, 2089, 2143
LmnI GCTCC 4 cut(s) 28, 1115, 1191, 1787
MaeI CTAG 9 cut(s) 255, 450, 468, 1416, 1613, 1854, 2063, 2141, 2147
MaeII ACGT 3 cut(s) 817, 2244, 2387
MaeIII GTNAC 6 cut(s) 51, 325, 818, 1081, 2184, 2302
MalI GATC 9 cut(s) 97, 549, 1174, 1537, 1798, 1872, 2061, 2091, 2145
MbiI CCGCTC 1 cut(s) 484
MboI GATC 9 cut(s) 95, 547, 1172, 1535, 1796, 1870, 2059, 2089, 2143
MflI RGATCY 5 cut(s) 1172, 1535, 1870, 2059, 2143
MhlI GDGCHC 3 cut(s) 20, 1112, 2107
MlsI TGGCCA 1 cut(s) 2076
MluNI TGGCCA 1 cut(s) 2076
MlyI GAGTC 2 cut(s) 994, 1976
MmeI TCCRAC 5 cut(s) 50, 438, 516, 1309, 1353
Mox20I TGGCCA 1 cut(s) 2076
Mph1103I ATGCAT 1 cut(s) 1633
MroXI GAANNNNTTC 1 cut(s) 853
MscI TGGCCA 1 cut(s) 2076
MseI TTAA 9 cut(s) 612, 662, 996, 1055, 1131, 1284, 1421, 1847, 1985
MslI CAYNNNNRTG 3 cut(s) 743, 1299, 1891
Msp20I TGGCCA 1 cut(s) 2076
MspA1I CMGCKG 1 cut(s) 1253
MspCI CTTAAG 1 cut(s) 1984
MspI CCGG 1 cut(s) 32
MspR9I CCNGG 2 cut(s) 279, 1766
Mva1269I GAATGC 3 cut(s) 1592, 1840, 2218
MvaI CCWGG 2 cut(s) 279, 1766
MwoI GCNNNNNNNGC 6 cut(s) 626, 977, 1256, 1310, 1952, 2102
NdeI CATATG 1 cut(s) 1822
NdeII GATC 9 cut(s) 95, 547, 1172, 1535, 1796, 1870, 2059, 2089, 2143
NheI GCTAGC 2 cut(s) 254, 1415
NlaIV GGNNCC 3 cut(s) 24, 951, 1806
NmuCI GTSAC 2 cut(s) 325, 2302
NsbI TGCGCA 1 cut(s) 2217
NsiI ATGCAT 1 cut(s) 1633
NspI RCATGY 1 cut(s) 2010
PasI CCCWGGG 1 cut(s) 1765
PctI GAATGC 3 cut(s) 1592, 1840, 2218
PdmI GAANNNNTTC 1 cut(s) 853
PfeI GAWTC 4 cut(s) 1487, 1600, 1778, 2375
PleI GAGTC 2 cut(s) 994, 1975
PpsI GAGTC 2 cut(s) 994, 1975
Ppu21I YACGTR 1 cut(s) 818
PpuMI RGGWCCY 2 cut(s) 950, 1805
Psp124BI GAGCTC 2 cut(s) 20, 1112
Psp5II RGGWCCY 2 cut(s) 950, 1805
Psp6I CCWGG 2 cut(s) 277, 1764
PspEI GGTNACC 1 cut(s) 2184
PspFI CCCAGC 2 cut(s) 883, 2106
PspGI CCWGG 2 cut(s) 277, 1764
PspN4I GGNNCC 3 cut(s) 24, 951, 1806
PspPI GGNCC 5 cut(s) 83, 950, 1805, 2044, 2176
PspPPI RGGWCCY 2 cut(s) 950, 1805
PstI CTGCAG 3 cut(s) 730, 1927, 2206
PstNI CAGNNNCTG 3 cut(s) 329, 1046, 1640
PsuI RGATCY 5 cut(s) 1172, 1535, 1870, 2059, 2143
PvuII CAGCTG 1 cut(s) 1253
RsaI GTAC 1 cut(s) 71
RsaNI GTAC 1 cut(s) 70
RseI CAYNNNNRTG 3 cut(s) 743, 1299, 1891
SacI GAGCTC 2 cut(s) 20, 1112
SaqAI TTAA 9 cut(s) 612, 662, 996, 1055, 1131, 1284, 1421, 1847, 1985
Sau3AI GATC 9 cut(s) 95, 547, 1172, 1535, 1796, 1870, 2059, 2089, 2143
Sau96I GGNCC 5 cut(s) 83, 950, 1805, 2044, 2176
SbfI CCTGCAGG 1 cut(s) 1927
SchI GAGTC 2 cut(s) 994, 1976
ScrFI CCNGG 2 cut(s) 279, 1766
SdaI CCTGCAGG 1 cut(s) 1927
SduI GDGCHC 3 cut(s) 20, 1112, 2107
SfcI CTRYAG 4 cut(s) 726, 1923, 2202, 2307
SinI GGWCC 5 cut(s) 83, 950, 1805, 2044, 2176
SmiMI CAYNNNNRTG 3 cut(s) 743, 1299, 1891
SmlI CTYRAG 4 cut(s) 1568, 1931, 1973, 1984
SmoI CTYRAG 4 cut(s) 1568, 1931, 1973, 1984
SnaBI TACGTA 1 cut(s) 818
Sse8387I CCTGCAGG 1 cut(s) 1927
SsiI CCGC 4 cut(s) 220, 310, 350, 484
SspI AATATT 2 cut(s) 226, 576
SspMI CTAG 9 cut(s) 255, 450, 468, 1416, 1613, 1854, 2063, 2141, 2147
SstI GAGCTC 2 cut(s) 20, 1112
StyD4I CCNGG 2 cut(s) 277, 1764
StyI CCWWGG 1 cut(s) 1168
TaiI ACGT 3 cut(s) 820, 2247, 2390
TaqI TCGA 6 cut(s) 14, 98, 341, 650, 1799, 2037
TfiI GAWTC 4 cut(s) 1487, 1600, 1778, 2375
Tru1I TTAA 9 cut(s) 612, 662, 996, 1055, 1131, 1284, 1421, 1847, 1985
Tru9I TTAA 9 cut(s) 612, 662, 996, 1055, 1131, 1284, 1421, 1847, 1985
TseFI GTSAC 2 cut(s) 325, 2302
Tsp45I GTSAC 2 cut(s) 325, 2302
TspDTI ATGAA 9 cut(s) 224, 516, 576, 636, 669, 935, 1684, 2133, 2277
TspGWI ACGGA 2 cut(s) 75, 2090
Vha464I CTTAAG 1 cut(s) 1984
VpaK11BI GGWCC 5 cut(s) 83, 950, 1805, 2044, 2176
XapI RAATTY 4 cut(s) 169, 849, 937, 1520
XbaI TCTAGA 1 cut(s) 467
XceI RCATGY 1 cut(s) 2010
XmnI GAANNNNTTC 1 cut(s) 853
XspI CTAG 9 cut(s) 255, 450, 468, 1416, 1613, 1854, 2063, 2141, 2147
Zsp2I ATGCAT 1 cut(s) 1633
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.