Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006207.1

Orthogroup ID

OG0010982

Physical Location & Seq

Genomic Coordinates Reverse (-)

31481 .. 37753

Gene Structure 6273 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006207.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2472 bp

atgcagggctcgtcgtcgagctctgcggctcagccggaggccatactggagtggcttcagaaggaaatggggtaccgacccttgggcccttacggcggcgccgcctccagcaaatcccaattgccgtcaatcgacgccgtgaggaagatttgcagggggaacatgatacccatttggaacttcttgatcacgcgcgtcaagtcggagagtactgtgaagaatattcggaggaatattacggtgcacggcgacagcggcggcgcgtcgttggtgaagttggggaaggaggaggggaggagtaaaggggggaggaggaaggagaaggctggggagagttcgagtgcggcggaggtcagggaggcggcgctgcaggagagggaggcggcggagaaggaggtggacaagttgaggaatattgtcaagaggcagaggaaggatttgaaggctagaatgctggaggtttcgagggccgaggccgagaggaagaggatgcttgatgaaagatcaaagaagaggcataagcaggtgatgttggacgcatactatctacagtgtgaggaagcggaaaaaatatttgcagagtatcataaacgtctctgttattatgttaatcaagccagggattctcaaaggttaagtgtggactcgtctcttgaattggttaatagctttagttccaacagtgaaaaggaggctgtttattcaacacttaggggcagtaaagctgcagatgatgtacttcttattgaaaccactcgggaaagaaacatacggaaggcctgtgaatctcttgcagcacatatgattgaaaagattcgcaattcctttcctgcatatgaaggaagtggtattcatttaagtcctcagttagaagcagccaagttaggatttgaatttgatggggaattacctgaggaggtcagaggtgcaattctgaatggcctgaagagtcctcctcagttgctgcaggcaattacgtcatacacatcacgattgaaatctctaatttccagagaaatagaaaaaatagatgtaagagctgatgcagaaactttaaggtacaagtacgaaaacaaccaagttatagatgtttcttctcctgatgtgagttcacctttacactatcaactttatggtaatggaaagataggagttgacgcaccatcaagaggaactcagcttcttgaaagacagaaagcccatgttcagcaatttttggctactgaagatgcactgaacaaagctgcagaagctaggagtctgtgtcaaaatcttataaagcgtttgcatggaaatagtgatggagtttcttcaggcatatcacagaatgtaggcagtcttaggcaacttgagttggaggtttgggccaaggaaagagaagttgctggcttgagggctagcttgaatacgctaatgtctgaaatacagcgcctgaataaattatgtgcagaaagaaaagaagctgaagattcattgaaaaagaagtggaaaaagattgaagaatttgattcccgcagatctgaactggaaaccatatatactgctctactaaaagttaacatggatgctgccgccttctggaatcagcagccattagctgcaagggagtatgcatcaagcactattattccagcatgcacaatagttatggatctttcaaataatgcaaaagatcttattgaaaaagaagtatctgcttttgatcaaagtcctgataatagtctctacatgcttccagcaactccacaggcactattggagtcaatgggtgcaaacggctcgactggacctgaagctgttgctgctgcagaaaagaatgcagctatattaactgcaaaagcaggtgctagggatccatcagcaataccatctatatgtcgtgtatcagccgcccttcagtatcctggtggtctggagggttcagatgctgctttagcatcagtgttagagtcgctggagttctgtttgaaacttcgtggttctgaggctagcgtgttggaggacttagcaaaggcaatcaatttggtccatacacgacaggaccttgttgaaagtggtcatgtgttgttgaaccatgcctatagagctcaacaagaatatgataggaaaacgagtttttgtttaaatttggctgctgagcaagagagaactgtcacagagaaatggttgccagaacttaagactgcaattttgaatgctcagaagtgcttggaagactgcaattatgttagaggattgcttgatgaatggtgggagcaaccagcggcaactgttgttgactgggtcctagttgatggattaaatgtcgctgcttggcacaatcatgtgaagcagcttcttgcattttatgatcaggagcacttgagtgcaacggagccatacactgagatcaccacagccatcattggacttggggaagaggaggagggtagccccggcggaaggaacaggtctgggtcctctgggtcttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005819 GO:0005856 GO:0005874 GO:0005876 GO:0008017 GO:0008092 GO:0015630 GO:0015631 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0051011 GO:0099080 GO:0099081 GO:0099512 GO:0099513

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HAUS5

Protein Analysis

823

Amino Acids

91.11

Weight (kDa)

6.18

Isoelectric Point (pI)

52.97

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010982)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G38880
fragaria_vesca	FvH4_6g46350 FvH4_6g46350 FvH4_6g46350 FvH4_6g46350
malus_domestica	MD09G1074500.v1.1 MD17G1065900.v1.1
prunus_persica	Prupe.3G248800_v2.0.a1 Prupe.3G248800_v2.0.a1
pyrus_communis	pycom17g06620
rosa_chinensis	RchiOBHm_Chr2g0164851
rosa_laevigata	RLG00000021494
rosa_multiflora	Rmu_sc0006207.1_g000007
rosa_rugosa	Rorug02G0511000 Rorug02G0511000 Rorug02G0511100
rosa_samantha	Rh2AG579100 Rh2CG560800 Rh2DG600500
rosa_wichuraiana	Rw2G048070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1277
AarI	CACCTGC	2 cut(s)	514, 1832
Acc36I	ACCTGC	2 cut(s)	514, 1832
Acc65I	GGTACC	1 cut(s)	72
AccB1I	GGYRCC	2 cut(s)	72, 98
AccII	CGCG	3 cut(s)	193, 195, 263
AclWI	GGATC	3 cut(s)	1659, 1847, 1860
AcsI	RAATTY	3 cut(s)	893, 1502, 2125
AcuI	CTGAAG	7 cut(s)	41, 965, 1245, 1296, 1485, 1812, 1880
AcyI	GRCGYC	2 cut(s)	99, 135
AfaI	GTAC	5 cut(s)	74, 211, 738, 1061, 1067
AfiI	CCNNNNNNNGG	5 cut(s)	82, 95, 1169, 1578, 2442
AflII	CTTAAG	1 cut(s)	2177
AjnI	CCWGG	2 cut(s)	617, 1903
AleI	CACNNNNGTG	1 cut(s)	2364
Alw21I	GWGCWC	4 cut(s)	23, 246, 2089, 2361
Alw26I	GTCTC	3 cut(s)	599, 654, 1727
Alw44I	GTGCAC	1 cut(s)	242
AlwI	GGATC	3 cut(s)	1659, 1847, 1860
AlwNI	CAGNNNCTG	3 cut(s)	964, 1432, 1928
Ama87I	CYCGRG	1 cut(s)	756
AoxI	GGCC	7 cut(s)	39, 85, 468, 474, 777, 940, 1365
ApaI	GGGCCC	1 cut(s)	89
ApaLI	GTGCAC	1 cut(s)	242
ApoI	RAATTY	3 cut(s)	893, 1502, 2125
ArsI	GACNNNNNNTTYG	2 cut(s)	2173, 2205
Asp700I	GAANNNNTTC	1 cut(s)	813
Asp718I	GGTACC	1 cut(s)	72
AspLEI	GCGC	5 cut(s)	101, 195, 263, 367, 1431
AspS9I	GGNCC	9 cut(s)	85, 86, 468, 1365, 1787, 2026, 2041, 2284, 2457
AsuC2I	CCSGG	1 cut(s)	2436
AsuHPI	GGTGA	4 cut(s)	283, 538, 1104, 2383
AsuNHI	GCTAGC	2 cut(s)	1397, 1988
AvaI	CYCGRG	1 cut(s)	756
AvaII	GGWCC	5 cut(s)	1787, 2026, 2041, 2284, 2457
AxyI	CCTNAGG	1 cut(s)	912
BaeGI	GKGCMC	2 cut(s)	89, 246
BamHI	GGATCC	1 cut(s)	1852
BanI	GGYRCC	2 cut(s)	72, 98
BanII	GRGCYC	4 cut(s)	11, 23, 89, 2089
BbsI	GAAGAC	1 cut(s)	2220
Bbv12I	GWGCWC	4 cut(s)	23, 246, 2089, 2361
BccI	CCATC	7 cut(s)	893, 1171, 1295, 1864, 1876, 2288, 2408
BceAI	ACGGC	5 cut(s)	109, 109, 122, 262, 1792
BcgI	CGANNNNNNTGC	2 cut(s)	1761, 1795
BciT130I	CCWGG	2 cut(s)	619, 1905
BciVI	GTATCC	1 cut(s)	1911
BclI	TGATCA	3 cut(s)	186, 1702, 2350
BcnI	CCSGG	1 cut(s)	2436
BcoDI	GTCTC	3 cut(s)	599, 654, 1727
BfaI	CTAG	6 cut(s)	447, 1254, 1398, 1848, 1989, 2288
BfmI	CTRYAG	7 cut(s)	368, 548, 726, 965, 1245, 1806, 2080
BfoI	RGCGCY	3 cut(s)	102, 368, 1432
BfrI	CTTAAG	1 cut(s)	2177
BfuAI	ACCTGC	2 cut(s)	514, 1832
BfuI	GTATCC	1 cut(s)	1911
BglI	GCCNNNNNGGC	1 cut(s)	93
BglII	AGATCT	2 cut(s)	1517, 1672
BlpI	GCTNAGC	2 cut(s)	30, 2136
BmcAI	AGTACT	1 cut(s)	211
Bme1390I	CCNGG	3 cut(s)	619, 1905, 2436
Bme18I	GGWCC	5 cut(s)	1787, 2026, 2041, 2284, 2457
BmeT110I	CYCGRG	1 cut(s)	756
BmgT120I	GGNCC	9 cut(s)	85, 86, 468, 1365, 1787, 2026, 2041, 2284, 2457
BmiI	GGNNCC	7 cut(s)	74, 87, 100, 1854, 2285, 2376, 2458
BmrFI	CCNGG	3 cut(s)	619, 1905, 2436
BmrI	ACTGGG	1 cut(s)	2290
BmsI	GCATC	7 cut(s)	480, 1033, 1219, 1555, 1622, 1915, 1946
BmtI	GCTAGC	2 cut(s)	1401, 1992
BmuI	ACTGGG	1 cut(s)	2290
BpiI	GAAGAC	1 cut(s)	2220
BplI	GAGNNNNNCTC	2 cut(s)	940, 972
BpmI	CTGGAG	5 cut(s)	68, 91, 476, 1934, 1976
Bpu1102I	GCTNAGC	2 cut(s)	30, 2136
BpuEI	CTTGAG	3 cut(s)	1370, 1411, 2383
BpuMI	CCSGG	1 cut(s)	2436
BsaBI	GATNNNNATC	1 cut(s)	997
BsaHI	GRCGYC	2 cut(s)	99, 135
BsaJI	CCNNGG	5 cut(s)	81, 471, 618, 1368, 2434
BsaXI	ACNNNNNCTCC	2 cut(s)	1249, 1279
Bsc4I	CCNNNNNNNGG	5 cut(s)	82, 95, 1169, 1578, 2442
Bse1I	ACTGG	4 cut(s)	51, 1530, 1789, 2285
Bse21I	CCTNAGG	1 cut(s)	912
Bse8I	GATNNNNATC	1 cut(s)	997
BseBI	CCWGG	2 cut(s)	619, 1905
BseDI	CCNNGG	5 cut(s)	81, 471, 618, 1368, 2434
BseGI	GGATG	2 cut(s)	495, 1570
BseJI	GATNNNNATC	1 cut(s)	997
BseLI	CCNNNNNNNGG	5 cut(s)	82, 95, 1169, 1578, 2442
BseMII	CTCAG	9 cut(s)	44, 878, 903, 971, 1190, 1974, 2127, 2213, 2376
BseNI	ACTGG	4 cut(s)	51, 1530, 1789, 2285
BseRI	GAGGAG	7 cut(s)	302, 310, 325, 929, 945, 2435, 2438
BseSI	GKGCMC	2 cut(s)	89, 246
BseYI	CCCAGC	1 cut(s)	326
BsgI	GTGCAG	1 cut(s)	1467
Bsh1236I	CGCG	3 cut(s)	193, 195, 263
BshFI	GGCC	7 cut(s)	41, 87, 470, 476, 779, 942, 1367
BshNI	GGYRCC	2 cut(s)	72, 98
BsiHKAI	GWGCWC	4 cut(s)	23, 246, 2089, 2361
BsiHKCI	CYCGRG	1 cut(s)	756
BsiSI	CCGG	2 cut(s)	35, 2436
BslI	CCNNNNNNNGG	5 cut(s)	82, 95, 1169, 1578, 2442
BsmAI	GTCTC	3 cut(s)	599, 654, 1727
BsmBI	CGTCTC	2 cut(s)	599, 654
BsmI	GAATGC	3 cut(s)	456, 1822, 2200
BsnI	GGCC	7 cut(s)	41, 87, 470, 476, 779, 942, 1367
BsoBI	CYCGRG	1 cut(s)	756
Bsp120I	GGGCCC	1 cut(s)	85
Bsp1286I	GDGCHC	6 cut(s)	11, 23, 89, 246, 2089, 2361
Bsp143I	GATC	9 cut(s)	186, 503, 1517, 1651, 1672, 1702, 1852, 2350, 2388
Bsp1720I	GCTNAGC	2 cut(s)	30, 2136
BspANI	GGCC	7 cut(s)	41, 87, 470, 476, 779, 942, 1367
BspCNI	CTCAG	9 cut(s)	43, 877, 904, 970, 1189, 1975, 2128, 2212, 2377
BspFNI	CGCG	3 cut(s)	193, 195, 263
BspLI	GGNNCC	7 cut(s)	74, 87, 100, 1854, 2285, 2376, 2458
BspMAI	CTGCAG	5 cut(s)	372, 730, 969, 1249, 1810
BspMI	ACCTGC	2 cut(s)	514, 1832
BspOI	GCTAGC	2 cut(s)	1401, 1992
BspPI	GGATC	3 cut(s)	1659, 1847, 1860
BspT107I	GGYRCC	2 cut(s)	72, 98
BspTI	CTTAAG	1 cut(s)	2177
BsrI	ACTGG	4 cut(s)	51, 1530, 1789, 2285
BssECI	CCNNGG	5 cut(s)	81, 471, 618, 1368, 2434
BssMI	GATC	9 cut(s)	186, 503, 1517, 1651, 1672, 1702, 1852, 2350, 2388
BssNI	GRCGYC	2 cut(s)	99, 135
BssT1I	CCWWGG	2 cut(s)	81, 1368
Bst2UI	CCWGG	2 cut(s)	619, 1905
Bst4CI	ACNGT	6 cut(s)	214, 241, 552, 683, 2152, 2272
Bst6I	CTCTTC	4 cut(s)	479, 506, 941, 2412
BstACI	GRCGYC	2 cut(s)	99, 135
BstAFI	CTTAAG	1 cut(s)	2177
BstC8I	GCNNGC	5 cut(s)	969, 1387, 1399, 1636, 1990
BstF5I	GGATG	2 cut(s)	495, 1570
BstFNI	CGCG	3 cut(s)	193, 195, 263
BstH2I	RGCGCY	3 cut(s)	102, 368, 1432
BstHHI	GCGC	5 cut(s)	101, 195, 263, 367, 1431
BstKTI	GATC	9 cut(s)	189, 506, 1520, 1654, 1675, 1705, 1855, 2353, 2391
BstMAI	GTCTC	3 cut(s)	599, 654, 1727
BstMBI	GATC	9 cut(s)	186, 503, 1517, 1651, 1672, 1702, 1852, 2350, 2388
BstMWI	GCNNNNNNNGC	6 cut(s)	93, 255, 1250, 1802, 1934, 2084
BstNI	CCWGG	2 cut(s)	619, 1905
BstNSI	RCATGY	2 cut(s)	1638, 1732
BstSCI	CCNGG	3 cut(s)	617, 1903, 2434
BstSFI	CTRYAG	7 cut(s)	368, 548, 726, 965, 1245, 1806, 2080
BstSLI	GKGCMC	2 cut(s)	89, 246
BstUI	CGCG	3 cut(s)	193, 195, 263
BstV2I	GAAGAC	1 cut(s)	2220
BstX2I	RGATCY	4 cut(s)	1517, 1651, 1672, 1852
BstYI	RGATCY	4 cut(s)	1517, 1651, 1672, 1852
Bsu36I	CCTNAGG	1 cut(s)	912
BsuI	GTATCC	1 cut(s)	1911
BsuRI	GGCC	7 cut(s)	41, 87, 470, 476, 779, 942, 1367
BtsCI	GGATG	2 cut(s)	495, 1570
BtsIMutI	CAGTG	5 cut(s)	557, 688, 1232, 1947, 2382
BveI	ACCTGC	2 cut(s)	514, 1832
Cac8I	GCNNGC	5 cut(s)	969, 1387, 1399, 1636, 1990
CaiI	CAGNNNCTG	3 cut(s)	964, 1432, 1928
CfoI	GCGC	5 cut(s)	101, 195, 263, 367, 1431
Cfr13I	GGNCC	9 cut(s)	85, 86, 468, 1365, 1787, 2026, 2041, 2284, 2457
CseI	GACGC	5 cut(s)	143, 184, 252, 545, 1166
Csp6I	GTAC	5 cut(s)	73, 210, 737, 1060, 1066
CviAII	CATG	9 cut(s)	163, 1202, 1289, 1561, 1635, 1729, 2060, 2075, 2324
CviQI	GTAC	5 cut(s)	73, 210, 737, 1060, 1066
DinI	GGCGCC	1 cut(s)	100
DpnI	GATC	9 cut(s)	188, 505, 1519, 1653, 1674, 1704, 1854, 2352, 2390
DpnII	GATC	9 cut(s)	186, 503, 1517, 1651, 1672, 1702, 1852, 2350, 2388
DraI	TTTAAA	1 cut(s)	2124
Eam1104I	CTCTTC	4 cut(s)	479, 506, 941, 2412
EarI	CTCTTC	4 cut(s)	479, 506, 941, 2412
EciI	GGCGGA	3 cut(s)	362, 401, 2454
Ecl136II	GAGCTC	2 cut(s)	21, 2087
Eco130I	CCWWGG	2 cut(s)	81, 1368
Eco147I	AGGCCT	1 cut(s)	779
Eco24I	GRGCYC	4 cut(s)	11, 23, 89, 2089
Eco47I	GGWCC	5 cut(s)	1787, 2026, 2041, 2284, 2457
Eco53kI	GAGCTC	2 cut(s)	21, 2087
Eco57I	CTGAAG	7 cut(s)	41, 965, 1245, 1296, 1485, 1812, 1880
Eco81I	CCTNAGG	1 cut(s)	912
Eco88I	CYCGRG	1 cut(s)	756
EcoICRI	GAGCTC	2 cut(s)	21, 2087
EcoO109I	RGGNCCY	4 cut(s)	86, 2041, 2284, 2457
EcoRII	CCWGG	2 cut(s)	617, 1903
EcoT14I	CCWWGG	2 cut(s)	81, 1368
EcoT22I	ATGCAT	1 cut(s)	1615
EcoT38I	GRGCYC	4 cut(s)	11, 23, 89, 2089
EgeI	GGCGCC	1 cut(s)	100
EheI	GGCGCC	1 cut(s)	100
ErhI	CCWWGG	2 cut(s)	81, 1368
Esp3I	CGTCTC	2 cut(s)	599, 654
FaeI	CATG	9 cut(s)	166, 1205, 1292, 1564, 1638, 1732, 2063, 2078, 2327
FatI	CATG	9 cut(s)	162, 1201, 1288, 1560, 1634, 1728, 2059, 2074, 2323
FauI	CCCGC	1 cut(s)	1520
FauNDI	CATATG	2 cut(s)	801, 835
FbaI	TGATCA	3 cut(s)	186, 1702, 2350
FokI	GGATG	2 cut(s)	502, 1577
FriOI	GRGCYC	4 cut(s)	11, 23, 89, 2089
FspBI	CTAG	6 cut(s)	447, 1254, 1398, 1848, 1989, 2288
GlaI	GCGC	5 cut(s)	100, 194, 262, 366, 1430
GsaI	CCCAGC	1 cut(s)	330
GsuI	CTGGAG	5 cut(s)	68, 91, 476, 1934, 1976
HaeII	RGCGCY	3 cut(s)	102, 368, 1432
HaeIII	GGCC	7 cut(s)	41, 87, 470, 476, 779, 942, 1367
HapII	CCGG	2 cut(s)	35, 2436
HgaI	GACGC	5 cut(s)	143, 184, 252, 545, 1166
HhaI	GCGC	5 cut(s)	101, 195, 263, 367, 1431
Hin1I	GRCGYC	2 cut(s)	99, 135
Hin1II	CATG	9 cut(s)	166, 1205, 1292, 1564, 1638, 1732, 2063, 2078, 2327
Hin6I	GCGC	5 cut(s)	99, 193, 261, 365, 1429
HinP1I	GCGC	5 cut(s)	99, 193, 261, 365, 1429
HincII	GTYRAC	3 cut(s)	1156, 1558, 2278
HindII	GTYRAC	3 cut(s)	1156, 1558, 2278
HpaI	GTTAAC	1 cut(s)	1558
HpaII	CCGG	2 cut(s)	35, 2436
HphI	GGTGA	4 cut(s)	283, 538, 1104, 2383
Hpy166II	GTNNAC	7 cut(s)	244, 400, 643, 1112, 1156, 1558, 2278
Hpy8I	GTNNAC	7 cut(s)	244, 400, 643, 1112, 1156, 1558, 2278
Hpy99I	CGWCG	4 cut(s)	16, 19, 137, 268
HpyCH4III	ACNGT	6 cut(s)	214, 241, 552, 683, 2152, 2272
HpyCH4IV	ACGT	2 cut(s)	592, 977
HpyF10VI	GCNNNNNNNGC	6 cut(s)	93, 255, 1250, 1802, 1934, 2084
HpySE526I	ACGT	2 cut(s)	592, 977
Hsp92I	GRCGYC	2 cut(s)	99, 135
Hsp92II	CATG	9 cut(s)	166, 1205, 1292, 1564, 1638, 1732, 2063, 2078, 2327
HspAI	GCGC	5 cut(s)	99, 193, 261, 365, 1429
KasI	GGCGCC	1 cut(s)	98
KpnI	GGTACC	1 cut(s)	76
Ksp22I	TGATCA	3 cut(s)	186, 1702, 2350
KspAI	GTTAAC	1 cut(s)	1558
Kzo9I	GATC	9 cut(s)	186, 503, 1517, 1651, 1672, 1702, 1852, 2350, 2388
LmnI	GCTCC	3 cut(s)	2254, 2356, 2374
LweI	GCATC	7 cut(s)	480, 1033, 1219, 1555, 1622, 1915, 1946
MaeI	CTAG	6 cut(s)	447, 1254, 1398, 1848, 1989, 2288
MaeII	ACGT	2 cut(s)	592, 977
MaeIII	GTNAC	1 cut(s)	2152
MalI	GATC	9 cut(s)	188, 505, 1519, 1653, 1674, 1704, 1854, 2352, 2390
MboI	GATC	9 cut(s)	186, 503, 1517, 1651, 1672, 1702, 1852, 2350, 2388
MfeI	CAATTG	1 cut(s)	119
MflI	RGATCY	4 cut(s)	1517, 1651, 1672, 1852
MhlI	GDGCHC	6 cut(s)	11, 23, 89, 246, 2089, 2361
Mly113I	GGCGCC	1 cut(s)	99
MlyI	GAGTC	5 cut(s)	638, 958, 1267, 1769, 1958
MmeI	TCCRAC	5 cut(s)	183, 513, 702, 1335, 1977
Mph1103I	ATGCAT	1 cut(s)	1615
MroXI	GAANNNNTTC	1 cut(s)	813
MslI	CAYNNNNRTG	3 cut(s)	1873, 2322, 2364
MspA1I	CMGCKG	2 cut(s)	255, 2264
MspCI	CTTAAG	1 cut(s)	2177
MspI	CCGG	2 cut(s)	35, 2436
MspR9I	CCNGG	3 cut(s)	619, 1905, 2436
MunI	CAATTG	1 cut(s)	119
Mva1269I	GAATGC	3 cut(s)	456, 1822, 2200
MvaI	CCWGG	2 cut(s)	619, 1905
MvnI	CGCG	3 cut(s)	193, 195, 263
MwoI	GCNNNNNNNGC	6 cut(s)	93, 255, 1250, 1802, 1934, 2084
NarI	GGCGCC	1 cut(s)	99
NciI	CCSGG	1 cut(s)	2436
NdeI	CATATG	2 cut(s)	801, 835
NdeII	GATC	9 cut(s)	186, 503, 1517, 1651, 1672, 1702, 1852, 2350, 2388
NheI	GCTAGC	2 cut(s)	1397, 1988
NlaIII	CATG	9 cut(s)	166, 1205, 1292, 1564, 1638, 1732, 2063, 2078, 2327
NlaIV	GGNNCC	7 cut(s)	74, 87, 100, 1854, 2285, 2376, 2458
NmeAIII	GCCGAG	2 cut(s)	496, 502
NmuCI	GTSAC	1 cut(s)	2152
NsiI	ATGCAT	1 cut(s)	1615
NspI	RCATGY	2 cut(s)	1638, 1732
OliI	CACNNNNGTG	1 cut(s)	2364
PaeI	GCATGC	1 cut(s)	1638
PaqCI	CACCTGC	2 cut(s)	514, 1832
PceI	AGGCCT	1 cut(s)	779
PctI	GAATGC	3 cut(s)	456, 1822, 2200
PdmI	GAANNNNTTC	1 cut(s)	813
PfeI	GAWTC	6 cut(s)	623, 785, 814, 1469, 1508, 1582
PflFI	GACNNNGTC	1 cut(s)	2282
PleI	GAGTC	5 cut(s)	638, 957, 1266, 1768, 1957
PluTI	GGCGCC	1 cut(s)	102
PpsI	GAGTC	5 cut(s)	638, 957, 1266, 1768, 1957
PpuMI	RGGWCCY	3 cut(s)	2041, 2284, 2457
PsiI	TTATAA	1 cut(s)	1277
Psp124BI	GAGCTC	2 cut(s)	23, 2089
Psp5II	RGGWCCY	3 cut(s)	2041, 2284, 2457
Psp6I	CCWGG	2 cut(s)	617, 1903
PspFI	CCCAGC	1 cut(s)	326
PspGI	CCWGG	2 cut(s)	617, 1903
PspN4I	GGNNCC	7 cut(s)	74, 87, 100, 1854, 2285, 2376, 2458
PspOMI	GGGCCC	1 cut(s)	85
PspPI	GGNCC	9 cut(s)	85, 86, 468, 1365, 1787, 2026, 2041, 2284, 2457
PspPPI	RGGWCCY	3 cut(s)	2041, 2284, 2457
PstI	CTGCAG	5 cut(s)	372, 730, 969, 1249, 1810
PstNI	CAGNNNCTG	3 cut(s)	964, 1432, 1928
PsuI	RGATCY	4 cut(s)	1517, 1651, 1672, 1852
PsyI	GACNNNGTC	1 cut(s)	2282
RsaI	GTAC	5 cut(s)	74, 211, 738, 1061, 1067
RsaNI	GTAC	5 cut(s)	73, 210, 737, 1060, 1066
RseI	CAYNNNNRTG	3 cut(s)	1873, 2322, 2364
SacI	GAGCTC	2 cut(s)	23, 2089
Sau3AI	GATC	9 cut(s)	186, 503, 1517, 1651, 1672, 1702, 1852, 2350, 2388
Sau96I	GGNCC	9 cut(s)	85, 86, 468, 1365, 1787, 2026, 2041, 2284, 2457
ScaI	AGTACT	1 cut(s)	211
SchI	GAGTC	5 cut(s)	638, 958, 1267, 1769, 1958
ScrFI	CCNGG	3 cut(s)	619, 1905, 2436
SduI	GDGCHC	6 cut(s)	11, 23, 89, 246, 2089, 2361
SfaNI	GCATC	7 cut(s)	480, 1033, 1219, 1555, 1622, 1915, 1946
SfcI	CTRYAG	7 cut(s)	368, 548, 726, 965, 1245, 1806, 2080
SfoI	GGCGCC	1 cut(s)	100
SinI	GGWCC	5 cut(s)	1787, 2026, 2041, 2284, 2457
SmiMI	CAYNNNNRTG	3 cut(s)	1873, 2322, 2364
SmlI	CTYRAG	4 cut(s)	1349, 1390, 2177, 2362
SmoI	CTYRAG	4 cut(s)	1349, 1390, 2177, 2362
SphI	GCATGC	1 cut(s)	1638
SseBI	AGGCCT	1 cut(s)	779
SspDI	GGCGCC	1 cut(s)	98
SspI	AATATT	4 cut(s)	223, 235, 415, 573
SspMI	CTAG	6 cut(s)	447, 1254, 1398, 1848, 1989, 2288
SstI	GAGCTC	2 cut(s)	23, 2089
StuI	AGGCCT	1 cut(s)	779
StyD4I	CCNGG	3 cut(s)	617, 1903, 2434
StyI	CCWWGG	2 cut(s)	81, 1368
TaaI	ACNGT	6 cut(s)	214, 241, 552, 683, 2152, 2272
TaiI	ACGT	2 cut(s)	595, 980
TaqI	TCGA	5 cut(s)	17, 132, 338, 464, 1781
TatI	WGTACW	2 cut(s)	209, 736
TfiI	GAWTC	6 cut(s)	623, 785, 814, 1469, 1508, 1582
TscAI	CASTG	5 cut(s)	557, 688, 1239, 1947, 2389
TseFI	GTSAC	1 cut(s)	2152
Tsp45I	GTSAC	1 cut(s)	2152
TspDTI	ATGAA	5 cut(s)	513, 842, 852, 1461, 2259
TspGWI	ACGGA	2 cut(s)	787, 2387
TspRI	CASTG	5 cut(s)	557, 688, 1239, 1947, 2389
Tth111I	GACNNNGTC	1 cut(s)	2282
Vha464I	CTTAAG	1 cut(s)	2177
VneI	GTGCAC	1 cut(s)	242
VpaK11BI	GGWCC	5 cut(s)	1787, 2026, 2041, 2284, 2457
XapI	RAATTY	3 cut(s)	893, 1502, 2125
XceI	RCATGY	2 cut(s)	1638, 1732
XmnI	GAANNNNTTC	1 cut(s)	813
XspI	CTAG	6 cut(s)	447, 1254, 1398, 1848, 1989, 2288
ZrmI	AGTACT	1 cut(s)	211
Zsp2I	ATGCAT	1 cut(s)	1615

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.