Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0006042

Physical Location & Seq

Genomic Coordinates Forward (+)

64181597 .. 64187672

Gene Structure 6076 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0511100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2052 bp

ATGTCTAGCTTTGTGGGTGTTGTTGTTAATGATACAGAGCTACAGAGCCAATTCACCCAAGTCGAGCTTCGTACCCTCAAATCAAAATTTCTTTCAACAAAGACTCAGAATGGGCGCGTCACGCTTAAAGATTTGCCGGGTATTTTTGCAAGTCTGAGGTCTTTTAATGAAACGTTCAGAGAAGAGGAGATTAAGACCATCTTGGAGGAGTCAAGAAAGGACAGTGGTGAAGAACTTGAATTCGAGTCGTTTCTGCGGGCACATTTGAATTTACAAGCCCGTGCAGGCGCAAAATCTGGTCGTTTCAAAAAAACTGCTTCATTTCTCAAGGCAACCACTACAAAGGTTGTCCACTCGATCAATGAAAATGAAAAGGCTTCGTATGTCCACCACATTAACAACTACCTGGCAGAAGATTCGTTCTTGAAGAAGTATCTTCCATTAGATCCAGCTACAAATGCTTTATTTGATCTTGCGAAAGATGGAGTTCTTCTTTGTAAGCTCATCAACATAGCAGTTCCTGGGACTATAGACGAGCGTGCTATCAACACTAAAGGGGTCCTTAATCCATGGGAGAGAAATGAGAACCATACACTTTGTCTTAATTCAGCAAAAGCTATTGGCTGCACTGTGGTTAACATTGGTACACAGGATTTGGCTGAAGCAAGGCCTCATCTTCTGCTCGGCTTAATTTCTCAAATTATCAAGATTCAACTGTTAGCTGATCTTAATCTGAAGAAAACTCCACAGCTTGTGGAATTGGTGGATGACAGCCAGGAGGTGGAGGAGCTCTTGGGTCTACCGCCAGAGAAGGTTCTACTAAAATGGATGAATTTTCATTTGAAGAAAGCTGGATACGAAAAACAAGTGACAAACTTCTCTTCTGATGTCAAGGATGGAGAGGCTTATGCTTACCTGATTAATGCTCTTGCACCCGAGGTCTCAGGCCCCGCTGCCTTGGATACAAAAGATCCTACACAAAGAGCAACCATGGTTCTCGAGCAAGCTGAGAAATTGGATTGCAAAAGATTTCTCTCTCCTAAAGACATTGTTGAGGGCTCACCAAATCTTAATCTTGCATTTGTTGCACAAATCTTCCAGCACAGGAATGGATTGAGTGCAGATAGTAAAAAAATGTCTTTTGCTGAGATGATGACAGATGATGCAGAAACTTCTCGGGAAGAGAGATGCTTCCGTCTGTGGATCAACAGCCTTGGAACTGCAACCTATGTTAATAATCTTTTTGAAGATGTTAGAAATGGATGGGTTCTTTTGGAAGTGCTTGACAAAATTTCTTCTGGATCAGTCAACTGGAAAAAAGCCTCAAAGCCTCCAATAAAAATGCCATTCAGAAAGGTTGAGAATTGTAACCAAGTTATAGAGATTGGGAAGGAATTAAATTTCTCGCTTGTGAATGTAGCTGGTAATGATATTGTGCAAGGAAATAAGAAGCTCATACTGGCTTATTTGTGGCAGTTGATGAGGTTTAGTATGCTTCAACTCCTGAGAAACTTGAGATCACACTCCCATGGAAAAGCTGGTAAAGAGATAACTGATGCTGAAATTCTAAACTGGGCAAACAATAAAGTGAAGAAGTCGGGTAGAACCTCCCAAATGGAGAGTTTCAAGGATAAAAATCTCTCAAGTGGAATTTTCTTCCTCGAGCTTCTTAGTGCTGTGGAGCCAAGGGTGGTCAATTGGAGTCTTGCCACAAAGGGAGAAACTGAGGAAGACAAGAAGGGGAATGCAACATATATAATTAGTGTCGCTCGAAAGCTTGGTTGCTCCATTTTCTTGTTACCTGAGGACATTATGGAGGTAAACCAGAAGATGATCCTTATTTTGACTGCAAGCATCATGTACTGGAGTATGCAGCAATCAGAGTCGGCCGCTGACAGTCCCGTGGGTACCCCTACTAAAGCTTCTAATGCTGGTGAGAGCGAAGCAGGTTTGGCTAGGGAAGTCTCGAACTTGTCCATCACTGGCAATACTACTTCCCAACAGACAGGAAATCAATCTTCTCAAGAATCAAAAGACCTCCCAAATAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0032446 GO:0036211 GO:0043161 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0051603 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

zf-RING_2 zf-rbx1

Protein Analysis

683

Amino Acids

76.01

Weight (kDa)

6.61

Isoelectric Point (pI)

37.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CH	PF00307	153 - 236	7.1e-14	Calponin homology (CH) domain
CH	PF00307	268 - 369	6.3e-23	Calponin homology (CH) domain
CH	PF00307	394 - 496	6.4e-19	Calponin homology (CH) domain
CH	PF00307	519 - 621	8.4e-19	Calponin homology (CH) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006042)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G38895 AT5G38895 AT5G38895
fragaria_vesca	FvH4_6g46360 FvH4_6g46360
malus_domestica	MD09G1074400.v1.1 MD17G1065800.v1.1
prunus_persica	Prupe.3G248900_v2.0.a1 Prupe.3G248900_v2.0.a1 Prupe.3G248900_v2.0.a1
pyrus_communis	pycom09g00150 pycom17g06610
rosa_chinensis	RchiOBHm_Chr2g0146111 RchiOBHm_Chr2g0164901
rosa_laevigata	RLG00000021495
rosa_multiflora	Rmu_sc0006207.1_g000009
rosa_roxburghii	Rroxscaffold_2G00086230
rosa_rugosa	Rorug02G0511100 Rorug02G0511200 Rorug02G0511200
rosa_samantha	Rh2AG579300 Rh2BG461500 Rh2BG590300 Rh2CG561000 Rh2DG470700 Rh2DG600700
rosa_wichuraiana	Rw2G048080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1937
Acc65I	GGTACC	1 cut(s)	1907
AccB1I	GGYRCC	1 cut(s)	1907
AccB7I	CCANNNNNTGG	1 cut(s)	781
AccI	GTMKAC	1 cut(s)	799
AccII	CGCG	1 cut(s)	117
AciI	CCGC	4 cut(s)	256, 803, 951, 1890
AclI	AACGTT	1 cut(s)	173
AclWI	GGATC	5 cut(s)	440, 965, 1211, 1309, 1828
AcoI	YGGCCR	1 cut(s)	1887
AcsI	RAATTY	8 cut(s)	86, 239, 268, 832, 1290, 1399, 1563, 1650
AcuI	CTGAAG	2 cut(s)	681, 755
AfaI	GTAC	4 cut(s)	73, 646, 1862, 1909
AfiI	CCNNNNNNNGG	1 cut(s)	781
AjnI	CCWGG	3 cut(s)	405, 520, 774
AjuI	GAANNNNNNNTTGG	2 cut(s)	51, 83
Alw21I	GWGCWC	1 cut(s)	792
Alw26I	GTCTC	2 cut(s)	946, 1969
AlwI	GGATC	5 cut(s)	440, 965, 1211, 1309, 1828
AlwNI	CAGNNNCTG	1 cut(s)	521
Ama87I	CYCGRG	4 cut(s)	935, 998, 1176, 1661
AoxI	GGCC	3 cut(s)	668, 946, 1887
ApeKI	GCWGC	3 cut(s)	624, 953, 1873
ApoI	RAATTY	8 cut(s)	86, 239, 268, 832, 1290, 1399, 1563, 1650
AseI	ATTAAT	1 cut(s)	921
Asp718I	GGTACC	1 cut(s)	1907
AspLEI	GCGC	2 cut(s)	117, 290
AspS9I	GGNCC	2 cut(s)	559, 947
AsuC2I	CCSGG	1 cut(s)	138
AsuHPI	GGTGA	4 cut(s)	46, 239, 1053, 1946
AvaI	CYCGRG	4 cut(s)	935, 998, 1176, 1661
AvaII	GGWCC	1 cut(s)	559
AxyI	CCTNAGG	1 cut(s)	1803
BaeGI	GKGCMC	1 cut(s)	262
BanI	GGYRCC	1 cut(s)	1907
BanII	GRGCYC	2 cut(s)	792, 1061
BbsI	GAAGAC	1 cut(s)	1737
Bbv12I	GWGCWC	1 cut(s)	792
BbvI	GCAGC	3 cut(s)	611, 940, 1885
BccI	CCATC	5 cut(s)	206, 476, 890, 1257, 1985
BcgI	CGANNNNNNTGC	2 cut(s)	399, 433
BciT130I	CCWGG	3 cut(s)	407, 522, 776
BciVI	GTATCC	2 cut(s)	848, 955
BcnI	CCSGG	1 cut(s)	138
BcoDI	GTCTC	2 cut(s)	946, 1969
BfaI	CTAG	2 cut(s)	6, 1956
BfmI	CTRYAG	2 cut(s)	41, 528
BfuAI	ACCTGC	1 cut(s)	1937
BfuI	GTATCC	2 cut(s)	848, 955
BisI	GCNGC	4 cut(s)	625, 954, 1874, 1890
BlsI	GCNGC	4 cut(s)	626, 955, 1875, 1891
Bme1390I	CCNGG	4 cut(s)	138, 407, 522, 776
Bme18I	GGWCC	1 cut(s)	559
BmeT110I	CYCGRG	4 cut(s)	935, 998, 1176, 1661
BmgT120I	GGNCC	2 cut(s)	559, 947
BmiI	GGNNCC	4 cut(s)	560, 949, 1683, 1909
BmrFI	CCNGG	4 cut(s)	138, 407, 522, 776
BmrI	ACTGGG	1 cut(s)	1582
BmsI	GCATC	4 cut(s)	1153, 1178, 1546, 1863
BmuI	ACTGGG	1 cut(s)	1582
BpiI	GAAGAC	1 cut(s)	1737
BpmI	CTGGAG	1 cut(s)	1885
BpuEI	CTTGAG	4 cut(s)	311, 1534, 1627, 2007
BpuMI	CCSGG	1 cut(s)	138
BsaBI	GATNNNNATC	2 cut(s)	729, 1635
BsaI	GGTCTC	1 cut(s)	946
BsaJI	CCNNGG	9 cut(s)	521, 569, 936, 957, 990, 1213, 1528, 1685, 1902
Bsc4I	CCNNNNNNNGG	1 cut(s)	781
Bse1I	ACTGG	5 cut(s)	1316, 1464, 1577, 1868, 1987
Bse21I	CCTNAGG	1 cut(s)	1803
Bse8I	GATNNNNATC	2 cut(s)	729, 1635
BseBI	CCWGG	3 cut(s)	407, 522, 776
BseDI	CCNNGG	9 cut(s)	521, 569, 936, 957, 990, 1213, 1528, 1685, 1902
BseGI	GGATG	4 cut(s)	772, 834, 901, 1268
BseJI	GATNNNNATC	2 cut(s)	729, 1635
BseLI	CCNNNNNNNGG	1 cut(s)	781
BseMII	CTCAG	8 cut(s)	119, 146, 957, 999, 1137, 1496, 1716, 1794
BseNI	ACTGG	5 cut(s)	1316, 1464, 1577, 1868, 1987
BseRI	GAGGAG	3 cut(s)	200, 221, 800
BseSI	GKGCMC	1 cut(s)	262
BseX3I	CGGCCG	1 cut(s)	1887
BseXI	GCAGC	3 cut(s)	611, 940, 1885
BsgI	GTGCAG	3 cut(s)	303, 610, 1140
Bsh1236I	CGCG	1 cut(s)	117
Bsh1285I	CGRYCG	1 cut(s)	1890
BshFI	GGCC	3 cut(s)	670, 948, 1889
BshNI	GGYRCC	1 cut(s)	1907
BsiEI	CGRYCG	1 cut(s)	1890
BsiHKAI	GWGCWC	1 cut(s)	792
BsiHKCI	CYCGRG	4 cut(s)	935, 998, 1176, 1661
BsiSI	CCGG	1 cut(s)	137
BslFI	GGGAC	2 cut(s)	538, 1884
BslI	CCNNNNNNNGG	1 cut(s)	781
BsmAI	GTCTC	2 cut(s)	946, 1969
BsmFI	GGGAC	2 cut(s)	538, 1884
BsmI	GAATGC	1 cut(s)	1750
BsnI	GGCC	3 cut(s)	670, 948, 1889
Bso31I	GGTCTC	1 cut(s)	946
BsoBI	CYCGRG	4 cut(s)	935, 998, 1176, 1661
Bsp1286I	GDGCHC	3 cut(s)	262, 792, 1061
Bsp143I	GATC	9 cut(s)	357, 445, 469, 724, 970, 1203, 1301, 1517, 1833
Bsp19I	CCATGG	3 cut(s)	569, 990, 1528
BspACI	CCGC	4 cut(s)	256, 803, 951, 1890
BspANI	GGCC	3 cut(s)	670, 948, 1889
BspCNI	CTCAG	8 cut(s)	118, 147, 956, 1000, 1138, 1497, 1717, 1795
BspFNI	CGCG	1 cut(s)	117
BspLI	GGNNCC	4 cut(s)	560, 949, 1683, 1909
BspMI	ACCTGC	1 cut(s)	1937
BspPI	GGATC	5 cut(s)	440, 965, 1211, 1309, 1828
BspT107I	GGYRCC	1 cut(s)	1907
BspTNI	GGTCTC	1 cut(s)	946
BsrI	ACTGG	5 cut(s)	1316, 1464, 1577, 1868, 1987
BssECI	CCNNGG	9 cut(s)	521, 569, 936, 957, 990, 1213, 1528, 1685, 1902
BssMI	GATC	9 cut(s)	357, 445, 469, 724, 970, 1203, 1301, 1517, 1833
BssT1I	CCWWGG	6 cut(s)	569, 957, 990, 1213, 1528, 1685
Bst2UI	CCWGG	3 cut(s)	407, 522, 776
Bst4CI	ACNGT	4 cut(s)	224, 631, 717, 1898
Bst6I	CTCTTC	3 cut(s)	177, 886, 1176
BstAPI	GCANNNNNTGC	1 cut(s)	1085
BstC8I	GCNNGC	5 cut(s)	258, 286, 540, 1005, 1852
BstDEI	CTNAG	9 cut(s)	105, 155, 943, 1008, 1146, 1505, 1670, 1725, 1803
BstDSI	CCRYGG	4 cut(s)	569, 990, 1528, 1902
BstF5I	GGATG	4 cut(s)	772, 834, 901, 1268
BstFNI	CGCG	1 cut(s)	117
BstHHI	GCGC	2 cut(s)	117, 290
BstKTI	GATC	9 cut(s)	360, 448, 472, 727, 973, 1206, 1304, 1520, 1836
BstMAI	GTCTC	2 cut(s)	946, 1969
BstMBI	GATC	9 cut(s)	357, 445, 469, 724, 970, 1203, 1301, 1517, 1833
BstMCI	CGRYCG	1 cut(s)	1890
BstMWI	GCNNNNNNNGC	5 cut(s)	121, 458, 1085, 1928, 1952
BstNI	CCWGG	3 cut(s)	407, 522, 776
BstSCI	CCNGG	4 cut(s)	136, 405, 520, 774
BstSFI	CTRYAG	2 cut(s)	41, 528
BstSLI	GKGCMC	1 cut(s)	262
BstUI	CGCG	1 cut(s)	117
BstV1I	GCAGC	3 cut(s)	611, 940, 1885
BstV2I	GAAGAC	1 cut(s)	1737
BstX2I	RGATCY	2 cut(s)	445, 970
BstYI	RGATCY	2 cut(s)	445, 970
BstZI	CGGCCG	1 cut(s)	1887
Bsu36I	CCTNAGG	1 cut(s)	1803
BsuI	GTATCC	2 cut(s)	848, 955
BsuRI	GGCC	3 cut(s)	670, 948, 1889
BtgI	CCRYGG	4 cut(s)	569, 990, 1528, 1902
BtsCI	GGATG	4 cut(s)	772, 834, 901, 1268
BtsIMutI	CAGTG	3 cut(s)	229, 627, 1980
BveI	ACCTGC	1 cut(s)	1937
Cac8I	GCNNGC	5 cut(s)	258, 286, 540, 1005, 1852
CaiI	CAGNNNCTG	1 cut(s)	521
CfoI	GCGC	2 cut(s)	117, 290
Cfr13I	GGNCC	2 cut(s)	559, 947
CseI	GACGC	1 cut(s)	106
Csp6I	GTAC	4 cut(s)	72, 645, 1861, 1908
CviAII	CATG	4 cut(s)	570, 991, 1529, 1858
CviQI	GTAC	4 cut(s)	72, 645, 1861, 1908
DdeI	CTNAG	9 cut(s)	105, 155, 943, 1008, 1146, 1505, 1670, 1725, 1803
DpnI	GATC	9 cut(s)	359, 447, 471, 726, 972, 1205, 1303, 1519, 1835
DpnII	GATC	9 cut(s)	357, 445, 469, 724, 970, 1203, 1301, 1517, 1833
EaeI	YGGCCR	1 cut(s)	1887
EagI	CGGCCG	1 cut(s)	1887
Eam1104I	CTCTTC	3 cut(s)	177, 886, 1176
EarI	CTCTTC	3 cut(s)	177, 886, 1176
Ecl136II	GAGCTC	1 cut(s)	790
EclXI	CGGCCG	1 cut(s)	1887
Eco130I	CCWWGG	6 cut(s)	569, 957, 990, 1213, 1528, 1685
Eco147I	AGGCCT	1 cut(s)	670
Eco24I	GRGCYC	2 cut(s)	792, 1061
Eco31I	GGTCTC	1 cut(s)	946
Eco47I	GGWCC	1 cut(s)	559
Eco52I	CGGCCG	1 cut(s)	1887
Eco53kI	GAGCTC	1 cut(s)	790
Eco57I	CTGAAG	2 cut(s)	681, 755
Eco81I	CCTNAGG	1 cut(s)	1803
Eco88I	CYCGRG	4 cut(s)	935, 998, 1176, 1661
EcoICRI	GAGCTC	1 cut(s)	790
EcoO109I	RGGNCCY	2 cut(s)	559, 947
EcoRI	GAATTC	1 cut(s)	239
EcoRII	CCWGG	3 cut(s)	405, 520, 774
EcoT14I	CCWWGG	6 cut(s)	569, 957, 990, 1213, 1528, 1685
EcoT38I	GRGCYC	2 cut(s)	792, 1061
ErhI	CCWWGG	6 cut(s)	569, 957, 990, 1213, 1528, 1685
FaeI	CATG	4 cut(s)	573, 994, 1532, 1861
FalI	AAGNNNNNCTT	6 cut(s)	51, 83, 185, 217, 546, 578
FaqI	GGGAC	2 cut(s)	538, 1884
FatI	CATG	4 cut(s)	569, 990, 1528, 1857
FauI	CCCGC	2 cut(s)	249, 958
FblI	GTMKAC	1 cut(s)	799
Fnu4HI	GCNGC	4 cut(s)	625, 954, 1874, 1890
FokI	GGATG	4 cut(s)	779, 841, 908, 1275
FriOI	GRGCYC	2 cut(s)	792, 1061
Fsp4HI	GCNGC	4 cut(s)	625, 954, 1874, 1890
FspBI	CTAG	2 cut(s)	6, 1956
GlaI	GCGC	2 cut(s)	116, 289
GluI	GCNGC	4 cut(s)	625, 954, 1874, 1890
GsuI	CTGGAG	1 cut(s)	1885
HaeIII	GGCC	3 cut(s)	670, 948, 1889
HapII	CCGG	1 cut(s)	137
HgaI	GACGC	1 cut(s)	106
HhaI	GCGC	2 cut(s)	117, 290
Hin1II	CATG	4 cut(s)	573, 994, 1532, 1861
Hin6I	GCGC	2 cut(s)	115, 288
HinP1I	GCGC	2 cut(s)	115, 288
HincII	GTYRAC	2 cut(s)	637, 1309
HindII	GTYRAC	2 cut(s)	637, 1309
HindIII	AAGCTT	2 cut(s)	1775, 1920
HinfI	GANTC	8 cut(s)	103, 209, 245, 416, 709, 1702, 1883, 2027
HpaI	GTTAAC	1 cut(s)	637
HpaII	CCGG	1 cut(s)	137
HphI	GGTGA	4 cut(s)	46, 239, 1053, 1946
Hpy166II	GTNNAC	7 cut(s)	352, 388, 637, 647, 800, 1309, 1822
Hpy188I	TCNGA	7 cut(s)	108, 156, 179, 735, 886, 1352, 1882
Hpy188III	TCNNGA	9 cut(s)	213, 424, 706, 998, 1178, 1299, 1504, 1966, 2024
Hpy8I	GTNNAC	7 cut(s)	352, 388, 637, 647, 800, 1309, 1822
HpyAV	CCTTC	3 cut(s)	805, 1384, 1732
HpyCH4III	ACNGT	4 cut(s)	224, 631, 717, 1898
HpyCH4IV	ACGT	1 cut(s)	173
HpyF10VI	GCNNNNNNNGC	5 cut(s)	121, 458, 1085, 1928, 1952
HpyF3I	CTNAG	9 cut(s)	105, 155, 943, 1008, 1146, 1505, 1670, 1725, 1803
HpySE526I	ACGT	1 cut(s)	173
Hsp92II	CATG	4 cut(s)	573, 994, 1532, 1861
HspAI	GCGC	2 cut(s)	115, 288
KpnI	GGTACC	1 cut(s)	1911
KspAI	GTTAAC	1 cut(s)	637
Kzo9I	GATC	9 cut(s)	357, 445, 469, 724, 970, 1203, 1301, 1517, 1833
LmnI	GCTCC	3 cut(s)	787, 1681, 1790
Lsp1109I	GCAGC	3 cut(s)	611, 940, 1885
LweI	GCATC	4 cut(s)	1153, 1178, 1546, 1863
MaeI	CTAG	2 cut(s)	6, 1956
MaeII	ACGT	1 cut(s)	173
MaeIII	GTNAC	4 cut(s)	118, 868, 1367, 1797
MalI	GATC	9 cut(s)	359, 447, 471, 726, 972, 1205, 1303, 1519, 1835
MboI	GATC	9 cut(s)	357, 445, 469, 724, 970, 1203, 1301, 1517, 1833
MfeI	CAATTG	1 cut(s)	1696
MflI	RGATCY	2 cut(s)	445, 970
MhlI	GDGCHC	3 cut(s)	262, 792, 1061
MlyI	GAGTC	5 cut(s)	97, 218, 254, 1711, 1892
MslI	CAYNNNNRTG	2 cut(s)	1107, 1527
MspA1I	CMGCKG	2 cut(s)	953, 1892
MspI	CCGG	1 cut(s)	137
MspR9I	CCNGG	4 cut(s)	138, 407, 522, 776
MunI	CAATTG	1 cut(s)	1696
Mva1269I	GAATGC	1 cut(s)	1750
MvaI	CCWGG	3 cut(s)	407, 522, 776
MvnI	CGCG	1 cut(s)	117
MwoI	GCNNNNNNNGC	5 cut(s)	121, 458, 1085, 1928, 1952
NciI	CCSGG	1 cut(s)	138
NcoI	CCATGG	3 cut(s)	569, 990, 1528
NdeII	GATC	9 cut(s)	357, 445, 469, 724, 970, 1203, 1301, 1517, 1833
NlaIII	CATG	4 cut(s)	573, 994, 1532, 1861
NlaIV	GGNNCC	4 cut(s)	560, 949, 1683, 1909
NmeAIII	GCCGAG	1 cut(s)	663
NmuCI	GTSAC	2 cut(s)	118, 868
PaeR7I	CTCGAG	2 cut(s)	998, 1661
PceI	AGGCCT	1 cut(s)	670
PctI	GAATGC	1 cut(s)	1750
PfeI	GAWTC	3 cut(s)	416, 709, 2027
PflMI	CCANNNNNTGG	1 cut(s)	781
PkrI	GCNGC	4 cut(s)	626, 955, 1875, 1891
PleI	GAGTC	5 cut(s)	97, 217, 253, 1710, 1891
PpsI	GAGTC	5 cut(s)	97, 217, 253, 1710, 1891
PpuMI	RGGWCCY	1 cut(s)	559
PshBI	ATTAAT	1 cut(s)	921
Psp124BI	GAGCTC	1 cut(s)	792
Psp1406I	AACGTT	1 cut(s)	173
Psp5II	RGGWCCY	1 cut(s)	559
Psp6I	CCWGG	3 cut(s)	405, 520, 774
PspGI	CCWGG	3 cut(s)	405, 520, 774
PspN4I	GGNNCC	4 cut(s)	560, 949, 1683, 1909
PspPI	GGNCC	2 cut(s)	559, 947
PspPPI	RGGWCCY	1 cut(s)	559
PspXI	VCTCGAGB	1 cut(s)	1661
PstNI	CAGNNNCTG	1 cut(s)	521
PsuI	RGATCY	2 cut(s)	445, 970
RsaI	GTAC	4 cut(s)	73, 646, 1862, 1909
RsaNI	GTAC	4 cut(s)	72, 645, 1861, 1908
RseI	CAYNNNNRTG	2 cut(s)	1107, 1527
SacI	GAGCTC	1 cut(s)	792
SatI	GCNGC	4 cut(s)	625, 954, 1874, 1890
Sau3AI	GATC	9 cut(s)	357, 445, 469, 724, 970, 1203, 1301, 1517, 1833
Sau96I	GGNCC	2 cut(s)	559, 947
SchI	GAGTC	5 cut(s)	97, 218, 254, 1711, 1892
ScrFI	CCNGG	4 cut(s)	138, 407, 522, 776
SduI	GDGCHC	3 cut(s)	262, 792, 1061
SfaNI	GCATC	4 cut(s)	1153, 1178, 1546, 1863
SfcI	CTRYAG	2 cut(s)	41, 528
Sfr274I	CTCGAG	2 cut(s)	998, 1661
SinI	GGWCC	1 cut(s)	559
SlaI	CTCGAG	2 cut(s)	998, 1661
SmiMI	CAYNNNNRTG	2 cut(s)	1107, 1527
SmlI	CTYRAG	6 cut(s)	326, 998, 1513, 1642, 1661, 2022
SmoI	CTYRAG	6 cut(s)	326, 998, 1513, 1642, 1661, 2022
SseBI	AGGCCT	1 cut(s)	670
SsiI	CCGC	4 cut(s)	256, 803, 951, 1890
SspMI	CTAG	2 cut(s)	6, 1956
SstI	GAGCTC	1 cut(s)	792
StuI	AGGCCT	1 cut(s)	670
StyD4I	CCNGG	4 cut(s)	136, 405, 520, 774
StyI	CCWWGG	6 cut(s)	569, 957, 990, 1213, 1528, 1685
TaaI	ACNGT	4 cut(s)	224, 631, 717, 1898
TaiI	ACGT	1 cut(s)	176
TaqI	TCGA	7 cut(s)	63, 243, 356, 999, 1662, 1771, 1967
TatI	WGTACW	1 cut(s)	1860
TauI	GCSGC	1 cut(s)	1892
TfiI	GAWTC	3 cut(s)	416, 709, 2027
TscAI	CASTG	3 cut(s)	229, 634, 1987
TseFI	GTSAC	2 cut(s)	118, 868
TseI	GCWGC	3 cut(s)	624, 953, 1873
Tsp45I	GTSAC	2 cut(s)	118, 868
TspDTI	ATGAA	6 cut(s)	183, 309, 378, 384, 827, 845
TspGWI	ACGGA	1 cut(s)	1184
TspRI	CASTG	3 cut(s)	229, 634, 1987
Van91I	CCANNNNNTGG	1 cut(s)	781
VpaK11BI	GGWCC	1 cut(s)	559
VspI	ATTAAT	1 cut(s)	921
XapI	RAATTY	8 cut(s)	86, 239, 268, 832, 1290, 1399, 1563, 1650
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1106, 1535
XhoI	CTCGAG	2 cut(s)	998, 1661
XmiI	GTMKAC	1 cut(s)	799
XspI	CTAG	2 cut(s)	6, 1956

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.